NO26G00530, NO26G00530 (gene) Nannochloropsis oceanica

Overview
NameNO26G00530
Unique NameNO26G00530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5679
Alignment locationchr26:187220..192898 -

Link to JBrowse

Properties
Property NameValue
DescriptionPhosphatidylinositol--trisphosphate 5-phosphatase 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:187220..192898 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0046856phosphatidylinositol dephosphorylation
GO:0046856phosphatidylinositol dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR000300IPPc
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO26G00530 vs. NCBI_GenBank
Match: EWM29391.1 (phosphatidylinositol- -trisphosphate 5-phosphatase 2 [Nannochloropsis gaditana])

HSP 1 Score: 118.2 bits (295), Expect = 2.100e-22
Identity = 154/655 (23.51%), Postives = 220/655 (33.59%), Query Frame = 0
Query:  525 IFVSTFNAGSTRPMTAL-GPLEEWIPSSSLPSSSSSRVWREGGGQXXXXXGREGGFDMYVLALQECMVLEELKEAVLARLEEGG--GKEGREGGWAVVAENVWSTNGNIALLLYVREEVVREGRFEVLPLGRARLNLGVSVGVGKLPNKAAVAIACRIDHRSVVFVSAHFAADKHGKEGGKARVRDVMRCLKGMRV-GREGEEVDLEHAFHHVVFCGDLNFRIKLKPELVLEKLNASVRKEGLGVRKEAFSAAALAI--SHTPCPPLLSLDAEGGRXXXXXXXGGLICPMRLKRYKEMLQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFXXXXXXXXXXXXXXXXXXXXXXXXXRVEGGRERRREGRVHPCYASALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASIXXXXXXXXXXXXXXXXXXXXXDGGASFLRSCWQWVYEHDELTRVMTEEKIVFHAFREGKLWFPPSFRWERGAKA-DYTAVKKGGXXXXXXXXXXXXXXXXXXFTLYKTSEGALKGSRPPSYTDRILVHSLPDLRGGREGGXXXXXGRAELRMESYDVCEEMTGSDHRPVAAVLSLLVDR 1173
            +FV+TFN G  R + AL G LEEWIP+                           G+D+YV+ LQEC  +EE + A+   L   G       E G A V        GNIAL +  R   V  G F  +    +R+  GV++ V K  NK    ++ R    ++ F++ HFA+D  GK+    R+ +  + L+ +++   EG +V L+H  HH    GDLNFR++L+   V+E +  +VR+ G  V +E  S  + A+  S T       +  E          G        +R+++   V                                                                                       +  R    EG        AL                                                                 +S                         ++   S W WV E DEL R +   +  F  FREG L FPPSFRW RG  A D++  K+                    + L K  +    G R PSYTDRIL HSL D+             R  LR+ +Y +CE + GSDHRPV+A   L V+R
Sbjct:  359 VFVTTFNMGPVRNLAALGGRLEEWIPAR--------------------------GYDVYVIGLQECHCVEEFRAALHQHLGGPGMFHMFNAEVGPATV------LYGNIALTVLARASDVASGAFAAVGAEVSRVRNGVNLVVTKAGNKGMTGLSFRYHDATLAFITCHFASDSGGKKRLLERLENARQTLREVKLTDDEGFDVHLQH--HHTFILGDLNFRMRLRAREVVEHVARTVRQMGASVWQEGESERSEAVDTSITQANEAGEIGDEDSLWVSTRPWGQ---AENDRRHEDNNHVYDKEGGLDQRADAVDQGMNWVSKDYMQLFSHAEEERAVVSYLSNASSYIGSDMSSFSSAHKDSIDITSESDWDNSKGRDSTGDPVASDSERHVTDEGSTAATTDPAL-----------------------------PYSDSSERKESGKRAKSPEGSWWRWFDRGVRGRRQHSSGGITSDAFSSFSSSQDQFLVFTSKASTSTSSLWGWVEEDDELRREIRTGQ-AFADFREGPLTFPPSFRWRRGGCAGDFSDAKR----------------MADAYVLVKKGD----GERVPSYTDRILFHSLSDV-------------RCYLRLIAYRMCEHVRGSDHRPVSAAFQLTVNR 913          
BLAST of NO26G00530 vs. NCBI_GenBank
Match: EWM28392.1 (type i inositol polyphosphate, partial [Nannochloropsis gaditana])

HSP 1 Score: 101.3 bits (251), Expect = 2.700e-17
Identity = 75/253 (29.64%), Postives = 119/253 (47.04%), Query Frame = 0
Query:  525 IFVSTFNAGSTRPMTAL-GPLEEWIPSSSLPSSSSSRVWREGGGQXXXXXGREGGFDMYVLALQECMVLEELKEAVLARLEEGGGKEGREGGWAVVAENVWSTN---GNIALLLYVREEVVREGRFEVLPLGRARLNLGVSVGVGKLPNKAAVAIACRIDHRSVVFVSAHFAADKHGKEGGKARVRDVMRCLKGMRV--GREGEEVDLEHAFHHVVFCGDLNFRIKLKPELVLEKLNASVRKEGLGVRKEAFS 772
            IF ST N G  + +  L G LEEW+P                            G+D+Y + +QEC++L++L++A+   L  GG  E     + +   +V +     G IAL  + R   V+ G F  +    +R+  GV++ V K  NK  V +A R    ++ FV+AHFA+D  GK   K R  D    L+ + +    EG +  LEH  HH    GDLN+R+K     ++ ++ A+  +   G+  + FS
Sbjct:  369 IFTSTLNLGGVKDIAHLGGSLEEWLPP---------------------------GYDVYCIGVQECIILDDLRQALHEHL--GGPSE-----YTMFQADVGAATMLYGTIALTAFARASDVQRGAFSAIDALTSRVKNGVNLVVTKTANKGMVGLAFRYHDSTLAFVTAHFASDSGGKTRLKRRNGDAYVLLRALNLTDTEEGFDFHLEH--HHTFVMGDLNYRMKTDAASMITRIAAAATR-AKGILNDGFS 584          
BLAST of NO26G00530 vs. NCBI_GenBank
Match: XP_008610710.1 (hypothetical protein SDRG_06692 [Saprolegnia diclina VS20] >EQC35948.1 hypothetical protein SDRG_06692 [Saprolegnia diclina VS20])

HSP 1 Score: 100.1 bits (248), Expect = 5.900e-17
Identity = 60/171 (35.09%), Postives = 88/171 (51.46%), Query Frame = 0
Query:  578 GFDMYVLALQECMVLEELKEAVLARLEEGGGKE----GREGGWAVVAENVWSTNGNIALLLYVREEVVREGRFEVLPLGRARLNLGVS-VGVGKLPNKAAVAIACRIDHRSVVFVSAHFAADKHGKEGGKARVRDVMRCLKGMRVGREGEEVDLEHAFHHVVFCGDLNFRI 744
            G D+YV+ LQEC+ L+E +  +L  LE    +      RE G     +     +G IA+ +YV    V  GRFE+   G ++++ G S +G+G+  NK AV  A R    +    S H A+D  GK   K R +D    L+ M +   G E D +H  HH +F GDLN+R+
Sbjct:  393 GHDVYVIGLQECLALDETRSELLTHLETTNNQRYTAYHREIG---SKQTTLGYHGYIAIAVYVATSDVECGRFEMFLDGMSKVHRGKSLIGMGRASNKGAVGFAFRYFDTTFAVASCHLASDSSGKSKMKKRHKDAASILRSMNLQSMGVEFDFQHMVHHTIFMGDLNYRL 560          
BLAST of NO26G00530 vs. NCBI_GenBank
Match: XP_008610711.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC35949.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 100.1 bits (248), Expect = 5.900e-17
Identity = 60/171 (35.09%), Postives = 88/171 (51.46%), Query Frame = 0
Query:  578 GFDMYVLALQECMVLEELKEAVLARLEEGGGKE----GREGGWAVVAENVWSTNGNIALLLYVREEVVREGRFEVLPLGRARLNLGVS-VGVGKLPNKAAVAIACRIDHRSVVFVSAHFAADKHGKEGGKARVRDVMRCLKGMRVGREGEEVDLEHAFHHVVFCGDLNFRI 744
            G D+YV+ LQEC+ L+E +  +L  LE    +      RE G     +     +G IA+ +YV    V  GRFE+   G ++++ G S +G+G+  NK AV  A R    +    S H A+D  GK   K R +D    L+ M +   G E D +H  HH +F GDLN+R+
Sbjct:  393 GHDVYVIGLQECLALDETRSELLTHLETTNNQRYTAYHREIG---SKQTTLGYHGYIAIAVYVATSDVECGRFEMFLDGMSKVHRGKSLIGMGRASNKGAVGFAFRYFDTTFAVASCHLASDSSGKSKMKKRHKDAASILRSMNLQSMGVEFDFQHMVHHTIFMGDLNYRL 560          
BLAST of NO26G00530 vs. NCBI_GenBank
Match: XP_008875767.1 (hypothetical protein H310_11013 [Aphanomyces invadans] >ETV95574.1 hypothetical protein H310_11013 [Aphanomyces invadans])

HSP 1 Score: 99.0 bits (245), Expect = 1.300e-16
Identity = 79/268 (29.48%), Postives = 122/268 (45.52%), Query Frame = 0
Query:  525 IFVSTFN--AGSTRPMTALGPLEEWIPSSSLPSSSSSRVWREGGGQXXXXXGREGGFDMYVLALQECMVLEELKEAVLARLEEGGGKEGREGGWAV-VAENVWSTNGNIALLLYVREEVVREGRFEVLPLGRARLNLGVS-VGVGKLPNKAAVAIACRIDHRSVVFVSAHFAADKHGKEGGKARVRDVMRCLKGMRVGREGEEVDLEHAFHHVVFCGDLNFR---IKLKPELVLEKLNASVR--KEGLGVRKEAFSAAALAISHTPCP 784
            IF STFN   G+  P      L +WIP                            G D+YV+ +QEC+ L  +++A+ A ++   GK   E G  +   E V   +G IA+ +YV    V  G F +   G +++N GV+ +G+G+  NK AV  A R  + +   ++ H A+D  GK   K R +D    L  M +     E D     HH +F GDLN+R   +   P+ +L  + + V   +     R +AFS+ A+  S +P P
Sbjct:  365 IFASTFNMAEGAVPPN---DQLSQWIPK---------------------------GKDVYVIGVQECLDLRSMRKAMAAHIQRINGKPFIEYGREIGRTEKVLGFHGFIAITVYVASADVHAGHFYMHLEGSSKVNRGVNLIGLGRASNKGAVGFAFRYHNLTFAVLTCHLASDSTGKSKIKKRHQDGSNILTNMHLQSIDNEFDCHLMAHHTIFMGDLNYRLTALDATPDHILNLIASVVNNVQSNAFSRGDAFSSHAVLSSGSPAP 602          
BLAST of NO26G00530 vs. NCBI_GenBank
Match: XP_008875768.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV95575.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 99.0 bits (245), Expect = 1.300e-16
Identity = 79/268 (29.48%), Postives = 122/268 (45.52%), Query Frame = 0
Query:  525 IFVSTFN--AGSTRPMTALGPLEEWIPSSSLPSSSSSRVWREGGGQXXXXXGREGGFDMYVLALQECMVLEELKEAVLARLEEGGGKEGREGGWAV-VAENVWSTNGNIALLLYVREEVVREGRFEVLPLGRARLNLGVS-VGVGKLPNKAAVAIACRIDHRSVVFVSAHFAADKHGKEGGKARVRDVMRCLKGMRVGREGEEVDLEHAFHHVVFCGDLNFR---IKLKPELVLEKLNASVR--KEGLGVRKEAFSAAALAISHTPCP 784
            IF STFN   G+  P      L +WIP                            G D+YV+ +QEC+ L  +++A+ A ++   GK   E G  +   E V   +G IA+ +YV    V  G F +   G +++N GV+ +G+G+  NK AV  A R  + +   ++ H A+D  GK   K R +D    L  M +     E D     HH +F GDLN+R   +   P+ +L  + + V   +     R +AFS+ A+  S +P P
Sbjct:  365 IFASTFNMAEGAVPPN---DQLSQWIPK---------------------------GKDVYVIGVQECLDLRSMRKAMAAHIQRINGKPFIEYGREIGRTEKVLGFHGFIAITVYVASADVHAGHFYMHLEGSSKVNRGVNLIGLGRASNKGAVGFAFRYHNLTFAVLTCHLASDSTGKSKIKKRHQDGSNILTNMHLQSIDNEFDCHLMAHHTIFMGDLNYRLTALDATPDHILNLIASVVNNVQSNAFSRGDAFSSHAVLSSGSPAP 602          
BLAST of NO26G00530 vs. NCBI_GenBank
Match: OQR81634.1 (hypothetical protein THRCLA_11553 [Thraustotheca clavata])

HSP 1 Score: 98.6 bits (244), Expect = 1.700e-16
Identity = 72/233 (30.90%), Postives = 108/233 (46.35%), Query Frame = 0
Query:  525 IFVSTFNAGSTRPMTALGPLEEWIPSSSLPSSSSSRVWREGGGQXXXXXGREGGFDMYVLALQECMVLEELKEAVLARLEEGGGKEGREGGWAVVAENV-WSTNGNIALLLYVREEVVREGRFEVLPLGRARLNLGVS-VGVGKLPNKAAVAIACRIDHRSVVFVSAHFAADKHGKEGGKARVRDVMRCLKGMRVGREGEEVDLEHAFHHVVFCGDLNFRI---KLKPELVLE 753
            +F STFN  +   + +   L  WIPS                           G D+YV+ LQEC+VL+E++ A+L  L+   GK   E    +   +     +G IA+ +YV    V  G FE+     ++++ G S +G+G+  NK AV  A R  + +   VS H A+D  GK     R +D    L+ +       E D +H  HH +F GDLN+R+   K  P+ VLE
Sbjct:  335 VFASTFNM-AEGAVPSKPSLASWIPS---------------------------GRDIYVIGLQECLVLDEVRAAILKHLQAVNGKSYTEYKREIGRRHTKLGYHGFIAISVYVPSSEVESGHFEMHMESSSKVHRGKSLIGMGRASNKGAVGFAFRYFNTTFAVVSCHLASDSSGKSKLLKRHKDSASVLRSLNPLSAVVEFDFQHLVHHTIFMGDLNYRLTSQKASPQDVLE 539          
BLAST of NO26G00530 vs. NCBI_GenBank
Match: EWM27419.1 (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 95.5 bits (236), Expect = 1.500e-15
Identity = 64/241 (26.56%), Postives = 110/241 (45.64%), Query Frame = 0
Query:  524 RIFVSTFNAGSTRPMTALGPLEEWIPSSSLPSSSSSRVWREGGGQXXXXXGREGGFDMYVLALQECMVLEELKEAVLARLEEGGGKE--GREGGWAVVAENVWSTNGNIALLLYVREEVVREGRFEVLPLGRARLNLGVSVGV-GKLPNKAAVAIACRIDHRSVVFVSAHFAADKHGKEGGKARVRDVMRCLKGMRVGREGEEVDLEHAFHHVVFCGDLNFRIKLKPELVLEKLNASVRKE 762
            ++F+ST N G    + + G +  W+P                            G+D+Y+L  QE ++L+ L+ A+   L      E   RE G A +       NG IA+ ++ R   ++ G   V       +N G+S+G+ G+  NK  V ++ R    S+  ++AHFAADKHG      R +D ++ L+ + +  + E+ D        +  GDLN+R+  KP  +L +++ S   E
Sbjct:  443 KVFISTCNVGGCSDVRSFGSIPAWVPR---------------------------GYDLYILGFQEVLILDSLRIALHDHLGGPAVYEMFCREIGDATI------LNGMIAITIFARTVDIQRGAVVVARSASGTVNTGMSLGIMGRAANKGTVGLSVRYHDLSIACITAHFAADKHGHSRVTRRNQDAVQTLRELSLTYDNEDFDAHLQHDVAILLGDLNYRLTAKPLDILRRVSESAAVE 650          
BLAST of NO26G00530 vs. NCBI_GenBank
Match: XP_009529708.1 (hypothetical protein PHYSODRAFT_561669 [Phytophthora sojae] >EGZ15959.1 hypothetical protein PHYSODRAFT_561669 [Phytophthora sojae])

HSP 1 Score: 94.7 bits (234), Expect = 2.500e-15
Identity = 68/231 (29.44%), Postives = 100/231 (43.29%), Query Frame = 0
Query:  525 IFVSTFNAGSTRPMTALGPLEEWIPSSSLPSSSSSRVWREGGGQXXXXXGREGGFDMYVLALQECMVLEELKEAVLARLEEG------GGKEGREGGWAVVAENVWSTN------GNIALLLYVREEVVREGRFEVLPLGRARLNLGVSVGVGKLPNKAAVAIACRIDHRSVVFVSAHFAADKHGKEGGKARVRDVMRCLKGMRVGREGEEVDLEHAFHHVVFCGDLNFRI 744
            IFVSTFN G  R   A   L++WIP                            G D+YV+ LQEC+ L   +  +   LE G       G   R   +      + S N      G+IA+ ++++   V  G F + P+ +  +N+G S+ +G+  NK AV  A R    S  FV+ H ++D  GK   + R RD    LK + +  E    +  H  HH    GDLN+R+
Sbjct:  338 IFVSTFNMGEARLTPA--QLDKWIPL---------------------------GHDIYVIGLQECLHLANTRSLIRQHLEGGRPRPAASGHARRASKFHQFNREIGSKNTSLGYHGHIAITVFIKSSDVDSGAFYMPPVVQQEVNVGKSLVLGRASNKGAVGFAFRYYDTSFAFVACHLSSDPKGKSKVRRRNRDSQDILKELHLNLEDVGFEFPHVHHHSFVLGDLNYRL 539          
BLAST of NO26G00530 vs. NCBI_GenBank
Match: XP_008904556.1 (hypothetical protein PPTG_10838 [Phytophthora parasitica INRA-310] >ETI48041.1 hypothetical protein F443_07839 [Phytophthora parasitica P1569] >ETI48076.1 hypothetical protein F443_07836 [Phytophthora parasitica P1569] >ETK87964.1 hypothetical protein L915_07689 [Phytophthora parasitica] >ETL41406.1 hypothetical protein L916_07618 [Phytophthora parasitica] >ETM47776.1 hypothetical protein L914_07581 [Phytophthora parasitica] >ETN10119.1 hypothetical protein PPTG_10838 [Phytophthora parasitica INRA-310] >ETP17798.1 hypothetical protein F441_07828 [Phytophthora parasitica CJ01A1] >ETP45868.1 hypothetical protein F442_07797 [Phytophthora parasitica P10297] >KUF71448.1 Phosphatidylinositol 3 [Phytophthora nicotianae])

HSP 1 Score: 94.7 bits (234), Expect = 2.500e-15
Identity = 68/231 (29.44%), Postives = 100/231 (43.29%), Query Frame = 0
Query:  525 IFVSTFNAGSTRPMTALGPLEEWIPSSSLPSSSSSRVWREGGGQXXXXXGREGGFDMYVLALQECMVLEELKEAVLARLEEG------GGKEGREGGWAVVAENVWSTN------GNIALLLYVREEVVREGRFEVLPLGRARLNLGVSVGVGKLPNKAAVAIACRIDHRSVVFVSAHFAADKHGKEGGKARVRDVMRCLKGMRVGREGEEVDLEHAFHHVVFCGDLNFRI 744
            IFVSTFN G  R   A   L++WIP                            G D+YV+ LQEC+ L   +  +   LE G       G   R   +      + S N      G+IA+ ++++   V  G F + P+ +  +N+G S+ +G+  NK AV  A R    S  FV+ H ++D  GK   + R RD    LK + +  E    +  H  HH    GDLN+R+
Sbjct:  319 IFVSTFNMGEARLTPA--QLDKWIPL---------------------------GHDIYVIGLQECLHLTNTRSLIRQHLEGGRPRPATSGPARRASKFHQFNREIGSKNTSLGYHGHIAITVFIKSSDVDNGAFYMPPVVQQEVNVGKSLVLGRASNKGAVGFAFRYYDTSFAFVACHLSSDPKGKSKVRRRNRDSQDILKELHLNLEDVGFEFPHVHHHSFVLGDLNYRL 520          
The following BLAST results are available for this feature:
BLAST of NO26G00530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29391.12.100e-2223.51phosphatidylinositol- -trisphosphate 5-phosphatase... [more]
EWM28392.12.700e-1729.64type i inositol polyphosphate, partial [Nannochlor... [more]
XP_008610710.15.900e-1735.09hypothetical protein SDRG_06692 [Saprolegnia dicli... [more]
XP_008610711.15.900e-1735.09hypothetical protein, variant [Saprolegnia diclina... [more]
XP_008875767.11.300e-1629.48hypothetical protein H310_11013 [Aphanomyces invad... [more]
XP_008875768.11.300e-1629.48hypothetical protein, variant [Aphanomyces invadan... [more]
OQR81634.11.700e-1630.90hypothetical protein THRCLA_11553 [Thraustotheca c... [more]
EWM27419.11.500e-1526.56type ii inositol- -trisphosphate 5-phosphatase [Na... [more]
XP_009529708.12.500e-1529.44hypothetical protein PHYSODRAFT_561669 [Phytophtho... [more]
XP_008904556.12.500e-1529.44hypothetical protein PPTG_10838 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL048nonsL048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006019NSK006019Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00530.1NO26G00530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|654697gene_7874Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00530.1NO26G00530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00530 ID=NO26G00530|Name=NO26G00530|organism=Nannochloropsis oceanica|type=gene|length=5679bp
CGAATTTCTTTATGGTAGTTTCTGTTTTGAAAAGAAAATCAGAGAAATTA
AATTTACCACCGAAAATATAAATATGTACATACACACCTTGTGAAAACAT
ATGTGGGCGGTGTGGGATAATGAGAAATGCCGGTGAGTCAGCAAGAAAAG
CAGTGGGCAAAGGCAAATGCCTCTCCAGGGAAGCGGCACATAAGCTCTTT
CCACGAGTCCTTTTTCGCTCATCTGCCCCCGCATCTTTTGCTCATGAGCA
GCAAAAGTGGAAAATTGTCATCTTCTCCATCGGATTTGGAACGGAAGAAG
AAGCTGTACGAAGTATAAATGATCATTTCAAGATTGAGCTCGAGGAGACC
AAGACGATCCACAGCCTCCTGCAGACAGTGCTGTCAGAGGAGGAGAAGCA
AGCTGCCCAAGTGCGTGCTCGGGCTGCAACCTACCATCATTTTGCTTTCC
TCCAAAAATGGCTTCTCCCCCAATCTCCACCCGTGAGCCTCATTCCTCTG
CGACAGAGTCCTCTGTGAGAGGGCGACAGGGGCCAAAAGGAAAAAACTAA
CCTCCCCTTCCCTGGACAAACGTCATCTCGACACATCCAAGTTCTTTGAT
TCAACACGATGAGTTTCCCATCAGCCCCTGTATAGACATCAATGGCAGCA
GAGGCAGTACAAATTGGATGCATCCATCCATGGGGTTTCGTCAAGGCTGA
CCTGGAGGATTAATCACACCTCACAATGCTGCTCGTTTGAGATCGTCAAC
AGCCCGACTCGGAATGGATCGCACTCCTCTCATTACGTTCCTCAATCGTC
CCGCACACAACAAATATACCATAGCACGCCTCCATCCTGACCATGTTACT
GTAGACGACGATTATCAGCCCCATCCTGAATGCAGGTGGAAACGTCTACC
GCCTTATCCGGCCAATCCTTCATGGAAGACTCTACAGAGGATCTCCCAGC
CTTGCCCGCAGACCACAAATTCTACCTCTACAGCCTGATCATAAGCAGCA
CCAGCGCCTTGATAGGCTTGATATGCGCACTCGTCATCATTGGACGCCTC
AGAGGATGGCTTTGTATCCGACGTGGTGGTAGAGGCTGCTCCTCCTCTGC
CTCCTCTGCTTCCAAACCTGTCCCCAAACCCCGGAGAGGCACCCTTGCCT
CCCTTCTCCACTTCCTCCTCCTCCGCCTCTTCTCTTTCAACGCGTTGTAT
GCCGCGGCATTTTCCCTCTTCTCCATCACTGAGGTCATATACCTCCGCGT
CCATCACCTCTCCCTCCCGTCCTTTTTTGGTGACGCCTCCTCCACTCTCT
CTCCCTCCTCCCCCTCCTCCTCCCTCTCCTCCTCCTCCTCGTCCTTGGGA
AAATGGGAATCCATCTCTACGGACCTCCTCTTTTGGCTGCAAGAACTTGC
TTTAATTCCCGCCTTTTTCCACGTCGTCCTGGCGTGGGTCTTCCATGAAT
ACATTGTCCACCATCGATCCCCCTCTGTTCTTGAAAACTTGGTGAGACGT
CGCCTTTGGTTCGTAGTCACTGTCGGCCTCTCCCTCACCACCGGTATATC
AGCGTTGTGCTTCTACTTGATCGGAAAAGAGGGAGGTGTGAGGGAGAGAG
GGAGGGAAGGAGCGGTGTTGAAACTTGTAACGACGGTGGCCTCATTGGGG
GTGACTGGGGGATTGTACTTGCACACGGTCGTGGCGTGGTGGAGGGGGAG
CAGCCATAGTAGGAGCAGCAGCAGCAACTGGATCAGTAGCAGAAGTGACA
ATTATGGAATACCGAAACAAGAGGAGGAAACGAAGGAGGACCCGCTGCAT
CTCCCCCCCCTCGAGGACCGTGACCCGTCCCTCTTTCCCCCCCTCCCTCG
CCTCACCTTCACCTCCTCCATCTCGGCCGTCCGTCAGGCCAGCACCACCT
ACCTCCGTCGTCCCCTTTGGAGGCTTGTGCTCCTCTTGGCGTGCTTCCTC
TTCATGTGGACATGGGCACTGGTCACTGAGACCCGATCCGTCCGTGCCGT
GTTTGGCCCAGACGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGCGCT
CGACAGGGGACATGCCATTCATTCTCATGACAATTGTAGATGCCCTGGTG
CTCGGAAACGTGTTTTTTTATCTCTCTCCTTCCACGTTATGGAAGAGGAG
GCAGCGGGCTAGAAAACGGAGGCGGCGGTTGAGGCAACAGCGACTGTTGC
TCCTCCAACGGCAGGTAAAGGAGTTGCAGCTAGAGCAGCAGCGGCAGCAC
CAGCAACAGCGGCAACAACAGGAGACAAAGAGGGGAGGAGTATTGACCTT
GGATGAGGAAAAGAGGGAAAAGGAGGAGGAAGAGATCCAGGAGATGGCTG
GTGGTGACCACGCTGCCCATGTTGCTGCGCCTGCGAAGACCACCACACCA
CCCCCGCCCGCCCTCCCTCCCTCCCTCCCTCCTCCTCAAAACGAATTTCG
CATTTTTGTGTCAACCTTCAACGCAGGCTCTACACGTCCTATGACGGCCT
TGGGACCATTGGAGGAGTGGATTCCCTCGTCCTCCCTCCCATCCTCGTCT
TCCTCCCGTGTCTGGAGGGAGGGAGGGGGGCAGGGTGAGGGCGAGGGAGG
GAGGGAGGGAGGGTTTGACATGTATGTGCTCGCGCTGCAGGAATGCATGG
TTTTGGAGGAACTCAAGGAGGCGGTGCTTGCACGGCTGGAGGAGGGAGGG
GGGAAGGAAGGGAGGGAGGGAGGGTGGGCGGTGGTGGCAGAAAATGTCTG
GAGCACCAACGGGAACATTGCATTGCTCCTCTATGTGAGAGAGGAGGTCG
TGAGGGAGGGAAGGTTTGAGGTCCTGCCTTTGGGGAGGGCTCGATTGAAT
CTGGGGGTGAGTGTAGGGGTGGGAAAGCTACCGAATAAGGCAGCGGTGGC
GATCGCCTGCCGCATCGACCACAGGAGCGTGGTTTTTGTGTCGGCCCATT
TCGCGGCGGACAAGCATGGAAAGGAGGGGGGAAAGGCGCGGGTGAGAGAT
GTAATGAGGTGCTTGAAGGGGATGAGGGTGGGGAGGGAGGGGGAGGAGGT
GGATCTTGAGCATGCGTTTCACCATGTGGTGTTTTGTGGGGATTTGAATT
TTCGAATTAAGTTGAAGCCGGAACTGGTTTTGGAGAAGCTCAATGCGTCG
GTGAGGAAGGAGGGATTGGGGGTAAGAAAGGAAGCATTCTCAGCTGCGGC
TTTGGCCATTTCTCACACGCCTTGCCCTCCTCTGCTTTCTCTTGATGCCG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGAGGCTTGATATGTCCC
ATGAGGCTCAAGAGATATAAGGAGATGCTGCAGGTGCGAGAGGAGGAGGA
GGAGAAGGAGGAAGAGGAGGTGGGAGGACGAGGACAAGGACGAGATGGAG
AAGGACGAGATGCCCCGCTGGAGATCGTGGTGATCAGTGGGAAAGAGGAG
GAGGACGAGGAGGAAGTTTTGGAAGGGAAAAGCGAGAAGAAAGAGAAGGT
TTCGTTCTCTCCTTTCCCCTCCTCCCCCTCCTCCTCTTTCTTCTCTCCCC
CTCCTCCTCCTTCAGCAGTCTCTACTTATGTTACAACACATCGGGTGGAA
GGGGGTAGGGAGAGAAGGAGGGAGGGAAGAGTGCATCCTTGTTATGCGTC
CGCTCTTGCGGCTCTTCTGAAGGAGCTGCAGGAGGAAGCGAAGGAAGAAA
GGGAGAAAGAAGAGAAGGGGAGAGAGGAGAAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGAGAGAGGA
GGAGGGGGAGGAGGAGGGGGAGGGGGAGGAGGAGGAGGTGGTGATGGAAG
GGGCCTCGATCGAGCAAGTGCCAAGCCAGGACAAGGAAGAGAGTAAGGAC
GGAAAGAAGGAAGGGCACGAATCCGACGGTGGCGCCTCCTTCCTCCGCAG
TTGCTGGCAGTGGGTGTATGAGCACGATGAGCTCACCCGTGTGATGACGG
AGGAGAAGATCGTGTTTCATGCTTTTAGGGAAGGAAAATTGTGGTTCCCC
CCTTCCTTCCGATGGGAGCGAGGAGCCAAAGCTGATTACACCGCTGTGAA
AAAAGGAGGGGGAGGGGGAGGGAGGGAGGGAGGGAGGGAAGGTGGGGGGG
CGTTTGACGGTTGCTTCACCCTCTACAAGACCTCGGAGGGCGCGTTGAAA
GGCTCACGACCCCCTTCATATACGGATCGGATCCTCGTACACTCCTTGCC
TGACCTAAGAGGAGGGAGGGAGGGAGGAGGAGGGAGGGAGGGCGGGCGGG
CAGAGCTACGGATGGAGAGCTACGATGTGTGTGAGGAGATGACGGGGAGT
GACCATCGACCAGTTGCTGCTGTCCTGTCCCTCTTGGTTGATCGCACCTC
CCTCGCGCCCTCCATGGCTTCCTCGTCTTTGTCCTCTGCCATTGCTGATG
GAGAGGAAGGGATGGAGGGAAAGGCCATTGCCGCTGCTGCTGCTGTTGTT
CATAAGACTCGCAAGGTCTGTCTGGTCTTGTCGGAGCTTCGTTTCATCTC
TCATGCTCATGCCTTTGGAGGAGGGGAAGAGGGAGGCAGGGAGGGAGGGT
GGTTGTCCTCATGGGGCAGGAGATTGAGTGCGTTGGGGGGCCTGGTGGGA
GGAAGGGAAGGAGGGAGGGAGGTGAGGAAAGTGGTGGTGCATTACCCCTT
GGCGATGGAGGGGAGCGAGTGGATGAATGAAAGGAGACATAGGGAGATGA
TGAAAGAGGGGGTGGAGGCCGGGTTTGCTTTTGGGAGGAAGAGGGGGAAG
AGATGGGGAAGGGAGGAGGAGGAGGAGGAGGAGGAGGCGGGGGAGTGGGA
GGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGAAAGAGGAGAAAGACG
ACGAAAAGGAAGTGAGGCTGGCAAGAAAGAGGAGACGGAGTTGGAGTCGT
GTGATGAGGGAGCAGCAGCATCATCACTTGGAAAATGTCCATCGGCTGTG
CGTGAAGGATGGGGGGGAGGGCGGGAGGGGTGGAGGGGTCTTCACCTTCT
CAGCGGCCGTGGAGGTGGGGAGGGAGGAGGGGAGAGAAGACGAGGTGCCA
GTGTATGCGGTGTTGAGGGTGATGGATCGGAAAGGAAGAGAGGAGGTGGG
GCAAGGTGTCTTGTGCTTAAGGGAAGTTTTTGAGACGTCGAGGAGGGGAG
GGAAGGAAGGCGTGCCGATCACGATGGATGTGACGAACGGTGGGAAGTTC
ATGGGCGTGCTGACGTTACAAGTGGAGGGATGGAAGATGGCCAGGAAGGG
GGAGAAGAGAAGAGGAAGGGTGGAGGAGTGTTGAAAGCTGGACAGTGCAC
AGGTTTCCTGGGAGAGGAGGAAGGGAGGGAGCGCCGTAAAGTTTGGCCTG
GGTGAGGCGGCTTGGATAGAAAAGGCAGACGCTGCTCGGGTGGAACGTGG
TGATGAAAGTATCGGAGGGGAAAAAAGGGCATTTAAAAGATATGTTGTGA
ATATGGGAGGGAGAGAGAATGTAAGTAATTCTGCGTGTCCGGAGATTGTT
TTTGTAACTCGGCGAAATGTGTGCAGCACAGAAAATTGGCAAAAAGTCGA
GACCATCTGACGCACAAATATAGTAAATGCAATTAAATGGAAAGTATATA
CAAAAGAGTTGACAAATATTGACGCGGGA
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protein sequence of NO26G00530.1

>NO26G00530.1-protein ID=NO26G00530.1-protein|Name=NO26G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1485bp
MQVETSTALSGQSFMEDSTEDLPALPADHKFYLYSLIISSTSALIGLICA
LVIIGRLRGWLCIRRGGRGCSSSASSASKPVPKPRRGTLASLLHFLLLRL
FSFNALYAAAFSLFSITEVIYLRVHHLSLPSFFGDASSTLSPSSPSSSLS
SSSSSLGKWESISTDLLFWLQELALIPAFFHVVLAWVFHEYIVHHRSPSV
LENLVRRRLWFVVTVGLSLTTGISALCFYLIGKEGGVRERGREGAVLKLV
TTVASLGVTGGLYLHTVVAWWRGSSHSRSSSSNWISSRSDNYGIPKQEEE
TKEDPLHLPPLEDRDPSLFPPLPRLTFTSSISAVRQASTTYLRRPLWRLV
LLLACFLFMWTWALVTETRSVRAVFGPDEGGREGGREGGRSTGDMPFILM
TIVDALVLGNVFFYLSPSTLWKRRQRARKRRRRLRQQRLLLLQRQVKELQ
LEQQRQHQQQRQQQETKRGGVLTLDEEKREKEEEEIQEMAGGDHAAHVAA
PAKTTTPPPPALPPSLPPPQNEFRIFVSTFNAGSTRPMTALGPLEEWIPS
SSLPSSSSSRVWREGGGQGEGEGGREGGFDMYVLALQECMVLEELKEAVL
ARLEEGGGKEGREGGWAVVAENVWSTNGNIALLLYVREEVVREGRFEVLP
LGRARLNLGVSVGVGKLPNKAAVAIACRIDHRSVVFVSAHFAADKHGKEG
GKARVRDVMRCLKGMRVGREGEEVDLEHAFHHVVFCGDLNFRIKLKPELV
LEKLNASVRKEGLGVRKEAFSAAALAISHTPCPPLLSLDAEGGREGGREG
GGGLICPMRLKRYKEMLQVREEEEEKEEEEVGGRGQGRDGEGRDAPLEIV
VISGKEEEDEEEVLEGKSEKKEKVSFSPFPSSPSSSFFSPPPPPSAVSTY
VTTHRVEGGRERRREGRVHPCYASALAALLKELQEEAKEEREKEEKGREE
KEEEEEEEEEEEEEEEEEEEGREEEGEEEGEGEEEEVVMEGASIEQVPSQ
DKEESKDGKKEGHESDGGASFLRSCWQWVYEHDELTRVMTEEKIVFHAFR
EGKLWFPPSFRWERGAKADYTAVKKGGGGGGREGGREGGGAFDGCFTLYK
TSEGALKGSRPPSYTDRILVHSLPDLRGGREGGGGREGGRAELRMESYDV
CEEMTGSDHRPVAAVLSLLVDRTSLAPSMASSSLSSAIADGEEGMEGKAI
AAAAAVVHKTRKVCLVLSELRFISHAHAFGGGEEGGREGGWLSSWGRRLS
ALGGLVGGREGGREVRKVVVHYPLAMEGSEWMNERRHREMMKEGVEAGFA
FGRKRGKRWGREEEEEEEEAGEWEEEEEEEEEEEEKEEKDDEKEVRLARK
RRRSWSRVMREQQHHHLENVHRLCVKDGGEGGRGGGVFTFSAAVEVGREE
GREDEVPVYAVLRVMDRKGREEVGQGVLCLREVFETSRRGGKEGVPITMD
VTNGGKFMGVLTLQVEGWKMARKGEKRRGRVEEC*
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Synonyms
Publications