NO19G01370, NO19G01370 (gene) Nannochloropsis oceanica

Overview
NameNO19G01370
Unique NameNO19G01370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1724
Alignment locationchr19:424174..425897 +

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Properties
Property NameValue
DescriptionElectron transfer flavoprotein subunit beta
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:424174..425897 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron transfer activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR012255ETF_b
IPR014730ETF_a/b_N
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
Homology
BLAST of NO19G01370 vs. NCBI_GenBank
Match: EWM23642.1 (electron transfer flavoprotein subunit beta [Nannochloropsis gaditana])

HSP 1 Score: 428.7 bits (1101), Expect = 1.700e-116
Identity = 222/252 (88.10%), Postives = 241/252 (95.63%), Query Frame = 0
Query:   84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAK 336
            RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKK ATEIVAVSVG KQAQETLRTALAMGVDR IH+ET+LR DQE+QPLAVAK+L+KLV+KEKAGL+ILGKQSIDGD AQTAPMLAALLGWPQATF+AGVEPVD NKAL+VERETDTGSEVLK+NLPAV+STDLRLNTPRYATIPNIMKAKKKPMELL+ E LG+D+TPK +V+SVA+P KRK GIMVE+VDEL+DKLKNEAK
Sbjct:   90 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKFATEIVAVSVGTKQAQETLRTALAMGVDRGIHVETALRADQELQPLAVAKMLAKLVDKEKAGLVILGKQSIDGDNAQTAPMLAALLGWPQATFAAGVEPVDENKALKVERETDTGSEVLKVNLPAVLSTDLRLNTPRYATIPNIMKAKKKPMELLSPEKLGVDVTPKTSVISVAEPGKRKAGIMVESVDELLDKLKNEAK 341          
BLAST of NO19G01370 vs. NCBI_GenBank
Match: CBJ27362.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 329.7 bits (844), Expect = 1.100e-86
Identity = 163/256 (63.67%), Postives = 212/256 (82.81%), Query Frame = 0
Query:   84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIET--SLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338
            R++VGVKRV+DYAVKVR+  DK GVEL NVK SMNPFCE A+EEAV+LKE K A+E++AVS+GPK A++TLRTALAMG DR +H+ T  ++R DQ ++PLAVA +L K+VE++K  L++LGKQSIDGD +QT PMLA +LGWPQATF+A V  V+  K L+VERETDTG++VL + LPAV++ DLRLN PRYAT+PNIMKAKKK +++LT+  +G+DL P+ TV+ V  PP R+GG++VE+VDEL+DKLK EA V+
Sbjct:    2 RVMVGVKRVVDYAVKVRIQPDKAGVELKNVKMSMNPFCENAMEEAVKLKETKAASEVIAVSIGPKAAKDTLRTALAMGADRGVHVMTDDAVRTDQGLEPLAVAGLLKKVVEEQKVDLVLLGKQSIDGDCSQTGPMLAGMLGWPQATFAAKVTVVEAGKQLEVERETDTGTQVLSVPLPAVVTADLRLNEPRYATLPNIMKAKKKTVDVLTAADMGVDLKPRTTVIEVVPPPVRQGGVIVESVDELIDKLKTEAGVL 257          
BLAST of NO19G01370 vs. NCBI_GenBank
Match: GAY00371.1 (electron transfer flavoprotein subunit beta [Pythium insidiosum])

HSP 1 Score: 324.7 bits (831), Expect = 3.400e-85
Identity = 173/254 (68.11%), Postives = 208/254 (81.89%), Query Frame = 0
Query:   84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338
            +ILV VKRV+DYAVK+RVA   KGVELNNVK SMNPFCEIAVEEA+RLKEKKVA EIVAVS+GPKQ+QET+RTALAMG DR IHIET +R DQE+QPLAVAK+L ++V KE   L+I GKQSID D AQT P+LA LL W QATF++ V  V+G +AL V RETD+G E +K+ LPAV++ DLRLN PRYAT+PNIMKAKKK +++L +++LG+DL P+I V+ V +P  RK GI V  VD+LVDKLKNEA VV
Sbjct:    2 KILVPVKRVVDYAVKIRVA--PKGVELNNVKMSMNPFCEIAVEEAIRLKEKKVAKEIVAVSIGPKQSQETIRTALAMGADRGIHIETDMRTDQELQPLAVAKLLKEIVAKESPNLVICGKQSIDADAAQTGPLLAGLLDWSQATFASEV-AVEG-EALTVTRETDSGVETIKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIDVLAADSLGVDLAPRIEVVEVKEPAARKAGIKVADVDQLVDKLKNEAGVV 251          
BLAST of NO19G01370 vs. NCBI_GenBank
Match: XP_009038470.1 (hypothetical protein AURANDRAFT_28553 [Aureococcus anophagefferens] >EGB06720.1 hypothetical protein AURANDRAFT_28553 [Aureococcus anophagefferens])

HSP 1 Score: 323.9 bits (829), Expect = 5.800e-85
Identity = 167/254 (65.75%), Postives = 201/254 (79.13%), Query Frame = 0
Query:   84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338
            R+LVGVKRVIDYAV+VRVA DK GVEL NVK SMNPFCEIA EEA++LKEKKVA+E+VAVS+GPKQAQETLR+ALAMG DR+IH+ T LR DQE+ PLAVA++L+K+V  E+  L+I+GKQSIDGD   T PMLA LLGW QATF+A  +        +VERETDTG+EV+K+ LP V++ DLRLNTPRY  +PNIMKAKKKP+E   +   G+DL P I V +VA P  R  GI V++VD LVDKLKNEA V+
Sbjct:    2 RVLVGVKRVIDYAVRVRVAGDKSGVELANVKMSMNPFCEIACEEAIQLKEKKVASEVVAVSIGPKQAQETLRSALAMGCDRAIHVATDLRLDQELNPLAVARLLAKVVADEQPDLVIVGKQSIDGDNGTTGPMLAELLGWSQATFAAKFDVAGDGATAEVERETDTGTEVVKVKLPTVLTADLRLNTPRYPKLPNIMKAKKKPLESKDAADYGVDLAPSIVVEAVASPEARAAGITVDSVDTLVDKLKNEAAVI 255          
BLAST of NO19G01370 vs. NCBI_GenBank
Match: POM60116.1 (Electron transfer flavoprotein subunit beta [Phytophthora palmivora var. palmivora])

HSP 1 Score: 322.0 bits (824), Expect = 2.200e-84
Identity = 170/254 (66.93%), Postives = 206/254 (81.10%), Query Frame = 0
Query:   84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338
            ++LV VKRV+DYAVK+RV  + KGV+L NVK SMNPFCEIAVEEA+RLKEKK+ATE+VAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE+  L+I GKQSID D AQT PMLA LL W Q TF++ V  VDG+ A+ V RETD+G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E L +++ G+DL P+I V+ V DP  RK GI V +VDELVDKLKNEA V+
Sbjct:    2 KVLVPVKRVVDYAVKIRV--EPKGVDLKNVKMSMNPFCEIAVEEAIRLKEKKLATEVVAVSIGPKQSQETLRTALAMGADRGIHITTDMRTDQELQPLAVAKLLKEIVAKEEPKLVICGKQSIDADAAQTGPMLAGLLDWSQGTFASEV-AVDGD-AVNVTRETDSGVETLKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIETLAADSFGVDLAPRIDVVEVKDPAARKAGIKVASVDELVDKLKNEAGVI 251          
BLAST of NO19G01370 vs. NCBI_GenBank
Match: XP_002902119.1 (electron transfer flavoprotein subunit beta [Phytophthora infestans T30-4] >AAN31477.1 electron transfer flavoprotein beta subunit [Phytophthora infestans] >EEY56791.1 electron transfer flavoprotein subunit beta [Phytophthora infestans T30-4])

HSP 1 Score: 320.9 bits (821), Expect = 4.900e-84
Identity = 170/254 (66.93%), Postives = 205/254 (80.71%), Query Frame = 0
Query:   84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338
            ++LV VKRV+DYAVK+RV  + KGV+L NVK SMNPFCEIAVEEA+RLKEKKVA+EIVAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE   L+I GKQSID D AQT PMLA LL W Q TF++ V  VDG+ A+ + RETD+G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E L +++ G+DL P+I V+ V DP  RK GI V +VDELVDKLKNEA V+
Sbjct:    2 KVLVPVKRVVDYAVKIRV--EPKGVDLKNVKMSMNPFCEIAVEEAIRLKEKKVASEIVAVSIGPKQSQETLRTALAMGADRGIHITTDMRTDQELQPLAVAKLLKEVVAKEGPKLVICGKQSIDADAAQTGPMLAGLLDWSQGTFASDV-AVDGD-AVNITRETDSGVETLKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIETLAADSFGVDLAPRIDVVEVKDPASRKAGIKVASVDELVDKLKNEAGVI 251          
BLAST of NO19G01370 vs. NCBI_GenBank
Match: XP_008890143.1 (hypothetical protein PPTG_00500 [Phytophthora parasitica INRA-310] >ETI57030.1 hypothetical protein F443_00609 [Phytophthora parasitica P1569] >ETK96803.1 hypothetical protein L915_00565 [Phytophthora parasitica] >ETL50151.1 hypothetical protein L916_00567 [Phytophthora parasitica] >ETM56472.1 hypothetical protein L914_00561 [Phytophthora parasitica] >ETN24039.1 hypothetical protein PPTG_00500 [Phytophthora parasitica INRA-310] >ETO85782.1 hypothetical protein F444_00600 [Phytophthora parasitica P1976] >ETP26809.1 hypothetical protein F441_00598 [Phytophthora parasitica CJ01A1] >ETP54777.1 hypothetical protein F442_00592 [Phytophthora parasitica P10297] >KUF76244.1 Electron transfer flavoprotein beta subunit [Phytophthora nicotianae] >KUF88627.1 Electron transfer flavoprotein beta subunit [Phytophthora nicotianae])

HSP 1 Score: 320.9 bits (821), Expect = 4.900e-84
Identity = 171/254 (67.32%), Postives = 204/254 (80.31%), Query Frame = 0
Query:   84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338
            ++LV VKRV+DYAVK+RV  + KGV+L NVK SMNPFCEIAVEEA+RLKEKKVA+EIVAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE   L+I GKQSID D AQT PMLA LL W Q TF++ V  V+G+ A+ V RETD G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E L +++ G+DLTP+I V+ V DP  RK GI V  VDELVDKLKNEA V+
Sbjct:    2 KVLVPVKRVVDYAVKIRV--EPKGVDLKNVKMSMNPFCEIAVEEAIRLKEKKVASEIVAVSIGPKQSQETLRTALAMGADRGIHITTDMRTDQELQPLAVAKLLKEVVAKEDPKLVICGKQSIDADAAQTGPMLAGLLDWSQGTFASEV-AVEGD-AVNVTRETDAGVETLKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIETLAADSFGVDLTPRIDVVEVKDPASRKAGIKVANVDELVDKLKNEAGVI 251          
BLAST of NO19G01370 vs. NCBI_GenBank
Match: ETM03217.1 (hypothetical protein L917_00540, partial [Phytophthora parasitica])

HSP 1 Score: 320.9 bits (821), Expect = 4.900e-84
Identity = 171/254 (67.32%), Postives = 204/254 (80.31%), Query Frame = 0
Query:   84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338
            ++LV VKRV+DYAVK+RV  + KGV+L NVK SMNPFCEIAVEEA+RLKEKKVA+EIVAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE   L+I GKQSID D AQT PMLA LL W Q TF++ V  V+G+ A+ V RETD G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E L +++ G+DLTP+I V+ V DP  RK GI V  VDELVDKLKNEA V+
Sbjct:   39 KVLVPVKRVVDYAVKIRV--EPKGVDLKNVKMSMNPFCEIAVEEAIRLKEKKVASEIVAVSIGPKQSQETLRTALAMGADRGIHITTDMRTDQELQPLAVAKLLKEVVAKEDPKLVICGKQSIDADAAQTGPMLAGLLDWSQGTFASEV-AVEGD-AVNVTRETDAGVETLKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIETLAADSFGVDLTPRIDVVEVKDPASRKAGIKVANVDELVDKLKNEAGVI 288          
BLAST of NO19G01370 vs. NCBI_GenBank
Match: ETM56484.1 (hypothetical protein L914_00559, partial [Phytophthora parasitica])

HSP 1 Score: 320.9 bits (821), Expect = 4.900e-84
Identity = 171/254 (67.32%), Postives = 204/254 (80.31%), Query Frame = 0
Query:   84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338
            ++LV VKRV+DYAVK+RV  + KGV+L NVK SMNPFCEIAVEEA+RLKEKKVA+EIVAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE   L+I GKQSID D AQT PMLA LL W Q TF++ V  V+G+ A+ V RETD G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E L +++ G+DLTP+I V+ V DP  RK GI V  VDELVDKLKNEA V+
Sbjct:   41 KVLVPVKRVVDYAVKIRV--EPKGVDLKNVKMSMNPFCEIAVEEAIRLKEKKVASEIVAVSIGPKQSQETLRTALAMGADRGIHITTDMRTDQELQPLAVAKLLKEVVAKEDPKLVICGKQSIDADAAQTGPMLAGLLDWSQGTFASEV-AVEGD-AVNVTRETDAGVETLKLGLPAVVTADLRLNEPRYATLPNIMKAKKKKIETLAADSFGVDLTPRIDVVEVKDPASRKAGIKVANVDELVDKLKNEAGVI 290          
BLAST of NO19G01370 vs. NCBI_GenBank
Match: XP_024571708.1 (electron transfer flavoprotein subunit beta [Plasmopara halstedii] >CEG35339.1 electron transfer flavoprotein subunit beta [Plasmopara halstedii])

HSP 1 Score: 315.5 bits (807), Expect = 2.100e-82
Identity = 166/254 (65.35%), Postives = 202/254 (79.53%), Query Frame = 0
Query:   84 RILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLIILGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV 338
            ++LV VKRV+DYAVK+RV  +  GV+L NVK SMNPFCEIAVEEA+RLKEKKVATE+VAVS+GPKQ+QETLRTALAMG DR IHI T +R DQE+QPLAVAK+L ++V KE   L+I GKQSID D AQT P+LA LL W Q TF++ V  ++G  A  V RETD G E LK+ LPAV++ DLRLN PRYAT+PNIMKAKKK +E+L +E+ G+DLTP+I ++ V +P  RK GI V +VDELVDKLKNE  V+
Sbjct:    2 KVLVPVKRVVDYAVKIRV--EPSGVDLKNVKMSMNPFCEIAVEEAIRLKEKKVATEVVAVSIGPKQSQETLRTALAMGADRGIHISTDMRTDQELQPLAVAKLLKEIVIKEDPKLVICGKQSIDADAAQTGPLLAGLLDWSQGTFASKV-AIEGESA-HVTRETDAGIETLKLCLPAVVTADLRLNEPRYATLPNIMKAKKKKIEILDAESFGVDLTPRIEIVEVKEPASRKAGIKVTSVDELVDKLKNEVGVI 251          
The following BLAST results are available for this feature:
BLAST of NO19G01370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23642.11.700e-11688.10electron transfer flavoprotein subunit beta [Nanno... [more]
CBJ27362.11.100e-8663.67conserved unknown protein [Ectocarpus siliculosus][more]
GAY00371.13.400e-8568.11electron transfer flavoprotein subunit beta [Pythi... [more]
XP_009038470.15.800e-8565.75hypothetical protein AURANDRAFT_28553 [Aureococcus... [more]
POM60116.12.200e-8466.93Electron transfer flavoprotein subunit beta [Phyto... [more]
XP_002902119.14.900e-8466.93electron transfer flavoprotein subunit beta [Phyto... [more]
XP_008890143.14.900e-8467.32hypothetical protein PPTG_00500 [Phytophthora para... [more]
ETM03217.14.900e-8467.32hypothetical protein L917_00540, partial [Phytopht... [more]
ETM56484.14.900e-8467.32hypothetical protein L914_00559, partial [Phytopht... [more]
XP_024571708.12.100e-8265.35electron transfer flavoprotein subunit beta [Plasm... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL013nonsL013Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR037ngnoR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004473NSK004473Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01370.1NO19G01370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632317gene_7531Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100165g8gene6819Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01370.1NO19G01370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01370 ID=NO19G01370|Name=NO19G01370|organism=Nannochloropsis oceanica|type=gene|length=1724bp
ATGACTGACCGGCGACCAAATGCGAACCTTCTGCATCGCCCACATCAAAC
ACAGCCCACTCACCAGCAAACTTCCCTCTCACTGCCGTCACAGGAGGCTT
GCACGAGTCGTGGTGGCCAGGCCAAAGCGATCAGCCAGCAGTCACAATCC
GCCACCCCCTCCTGCTCTGTCACGCTTCATCGCCAGCAGCAGCAGCGCAC
CCGGAGCAACGCAGCAGCTCGCAGCACCTGTACTTTTACAACAACTATGC
GCATCCTCGTAGGCGTCAAGCGTGTAATTGACTATGCCGTCAAAGTACGC
GTTGCCGCCGACAAGAAAGgtaagtgtctacgtgggcagatgggtagagg
gttgggacggggtctccagacccctcgtcggcgatgcccaaaggcacctc
tcaattgccaagcagcttcaagcactgttaccacagggcagccgcaagtc
cgactttttccagtatccttcgctaagtatgccccccactccctcctcct
tcccttcctccttcttcccccccccccacactagGCGTAGAGCTCAACAA
TGTTAAGCACTCTATGAACCCCTTCTGCGAAATAGCCGTCGAAGAAGCCG
TGCGCCTCAAGGAGAAAAAAGTCGCCACCGAGATTGTTGCAGTCTCCGTA
GGGCCCAAGCAAGCACAAGAGACTCTGCGGACCGCCCTTGCCATGGGCGT
TGACCGCAGCATTCACATCGAGACGTCCCTAAGGCCTGACCAAGAGATCC
AGCCCCTGGCAGTGGCCAAAATCCTCTCCAAGCTCGTCGAGAAGGAAAAG
GCCGGATTGATTATCCTGGGGAAACAGTCCATTGATGGTGACTACGCACA
GACCGCCCCTATGCTTGCTGCCTTGCTCGGATGGCCCCAGGCGACGTTTT
CCGCGGGGGTGGAGCCTGTGGACGGCAACAAGGCCCTGCAGGTAGAGCGA
GAAACAGACACAGGCTCAGAAGTCCTCAAAATTAATCTACCAGCGGTGAT
CTCGACGGATTTGCGGTTGAATACTCCGAGgtaagtggagatgcttgggc
gtgcctttcctccctctccctgatcagtttgactctcgtacactcgcaca
catgcacatacatatacccatgcgttcacattgtctttgaaaagcataga
atcacttccgtcagcaacgtaaattatgttttaaaagaaagaagcggacg
gaattccttgaacctccattcttccctcggcatcgttaagcctcctagac
aaaccccactcaaaacccttcccttcctccctccctccctccattccctc
ccttccctccctccctttccttccttcccttctttccctcccttgcctcc
cttgaaccttgtagATACGCCACCATCCCCAACATTATGAAGGCCAAGAA
GAAGCCCATGGAGCTCCTCACCTCCGAAGCACTAGGGATCGATCTTACGC
CGAAAATAACCGTGCTTTCCGTGGCAGATCCGCCCAAGAGGAAGGGGGGC
ATCATGGTGGAGACGGTGGATGAGCTCGTAGACAAGCTCAAAAACGAGGC
GAAAGTGGTCTAGAGGAAGGGAGGGAGGGAGGGAGGGAGGGGATACGCTT
ATACACTAGAAAAAGAGAGGAGGGATAGAAGAAGGGGAAGAGGAAGTATG
GCGATAAGAAGACTAGGACTGAGAAGGGTATGAAGATTAAGAAGAAGCAG
AAGAAGCAGAAGAAGCAGAAGAAG
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protein sequence of NO19G01370.1

>NO19G01370.1-protein ID=NO19G01370.1-protein|Name=NO19G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MTDRRPNANLLHRPHQTQPTHQQTSLSLPSQEACTSRGGQAKAISQQSQS
ATPSCSVTLHRQQQQRTRSNAAARSTCTFTTTMRILVGVKRVIDYAVKVR
VAADKKGVELNNVKHSMNPFCEIAVEEAVRLKEKKVATEIVAVSVGPKQA
QETLRTALAMGVDRSIHIETSLRPDQEIQPLAVAKILSKLVEKEKAGLII
LGKQSIDGDYAQTAPMLAALLGWPQATFSAGVEPVDGNKALQVERETDTG
SEVLKINLPAVISTDLRLNTPRYATIPNIMKAKKKPMELLTSEALGIDLT
PKITVLSVADPPKRKGGIMVETVDELVDKLKNEAKVV*
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Synonyms
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