NO18G02610, NO18G02610 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO18G02610 vs. NCBI_GenBank
Match: WP_019254919.1 (class I SAM-dependent methyltransferase [Burkholderia thailandensis] >PJO70704.1 class I SAM-dependent methyltransferase [Burkholderia thailandensis]) HSP 1 Score: 105.1 bits (261), Expect = 2.500e-19 Identity = 56/129 (43.41%), Postives = 73/129 (56.59%), Query Frame = 0 Query: 45 GSFELAVCMGDTLTHLQSMAQVRTVVADAASFLKPGGVLVLHFRDLTYHLEGTDRFLPCQTDENNIFTCVLEYEDGDKREEQKEDRFVLINDLLYSRPDSSSAWTFKKSQFKKLEVPPEKVLEMMQAEG 174 GS VCMGDTLTHL +M V V A L+P GVLVL FRDL+ L G DRFLP D + I TC+LEY V++NDL++ R S WT +KS ++KL +PP+ + + + G Sbjct: 129 GSAAAIVCMGDTLTHLDNMQDVAGVFKKARDVLQPSGVLVLTFRDLSIELTGLDRFLPVHADNDRIMTCMLEYRSD----------IVVVNDLIHVR--ESGGWTLRKSSYQKLRLPPDTLSDELTRLG 245
BLAST of NO18G02610 vs. NCBI_GenBank
Match: WP_030776198.1 (class I SAM-dependent methyltransferase [Streptomyces lavenduligriseus]) HSP 1 Score: 104.8 bits (260), Expect = 3.300e-19 Identity = 64/178 (35.96%), Postives = 97/178 (54.49%), Query Frame = 0 Query: 1 MSDELLQELEGHRASRAASSSSSLTVLQGDI-SALPSLLPSPQALGSFELAVCMGDTLTHLQSMAQVRTVVADAASFLKPGGVLVLHFRDLTYHLEGTDRFLPCQTDENNIFTCVLEYEDGDKREEQKEDRFVLINDLLYSRPDSSSAWTFKKSQFKKLEVPPEKVLEMMQAEGMETS 178 +S+ LL EL H A+ + + ++ D+ +ALP L+ GS VC+GDTLTHL + V + AD A+ L PGG V +RDLT L GTDRFLP ++ E+ I TC LEY D + V+++DL+++R +S W+ ++KL + VLE + G+ + Sbjct: 76 LSEPLLDELAAH-----ATGTPEVRPVRADVRTALPELVRP----GSVGAVVCLGDTLTHLPTRGAVAALCADVAAALAPGGTAVFAYRDLTVPLTGTDRFLPVRSTEDRIMTCFLEYPD------DFDAYTVVVHDLIHTRDPASGDWSLNAHSYRKLRLSHAWVLERFRGAGLRVA 238
BLAST of NO18G02610 vs. NCBI_GenBank
Match: WP_061613406.1 (class I SAM-dependent methyltransferase [Sorangium cellulosum] >KYF60691.1 SAM-dependent methyltransferase [Sorangium cellulosum]) HSP 1 Score: 104.8 bits (260), Expect = 3.300e-19 Identity = 70/186 (37.63%), Postives = 93/186 (50.00%), Query Frame = 0 Query: 2 SDELLQELEGHRASRAASSSSSLTVLQGDISALPSLLPSPQALGSF-ELAVCMGDTLTHLQSMAQVRTVVADAASFLKPGGVLVLHFRDLTYHLEGTDRFLPCQTDENNIFTCVLEYEDGDKREEQKEDRFVLINDLLYSRPDSSSAWTFKKSQFKKLEVPPEKVLEMMQAEGMETSLHPLAFGLV 187 SD+LL EL R + ++QGD LL + + G ELAVCMGDTL HL S A V + A A L PGG L L FRDLT LEG DRF+P + I TC LEY E V ++D++++R W S ++KL + P+ V ++A G + +A GLV Sbjct: 76 SDKLLAELASRR------GQLPVEIVQGD------LLEALERSGPLCELAVCMGDTLPHLGSKADVERMFAGCARRLTPGGRLALTFRDLTRELEGADRFIPVHDSADVIMTCFLEY----------EPETVKVHDIVHTRSQEDGRWRMSASFYRKLRLSPDWVCGALEAAGFRVAHREMARGLV 239
BLAST of NO18G02610 vs. NCBI_GenBank
Match: WP_078662281.1 (class I SAM-dependent methyltransferase [Streptomyces bicolor]) HSP 1 Score: 104.8 bits (260), Expect = 3.300e-19 Identity = 65/174 (37.36%), Postives = 91/174 (52.30%), Query Frame = 0 Query: 1 MSDELLQELEGHRASRAASSSSSLTVLQGDISALPSLLPSPQALGSFELAVCMGDTLTHLQSMAQVRTVVADAASFLKPGGVLVLHFRDLTYHLEGTDRFLPCQTDENNIFTCVLEYEDGDKREEQKEDRFVLINDLLYSRPDSSSAWTFKKSQFKKLEVPPEKVLEMMQAEGM 175 +S LL EL GH A + + ++ D+ L P GS VC+GDTLTHL + V + ADAA+ L PGG V +RDLT L GTDRFLP + EN I TC LEY D D V+++DL+++R + + W ++KL + VLE ++ G+ Sbjct: 108 LSRPLLDELAGH-----AVNLPGVRPVRADMRTALRELVRP---GSAAAVVCLGDTLTHLPTRGDVAALFADAAAALAPGGTAVFGYRDLTVPLTGTDRFLPVRATENRIMTCFLEYPD------DYNDYTVVVHDLIHTRDRADADWALTAHSYRKLRLSHAWVLEQLRIAGL 267
BLAST of NO18G02610 vs. NCBI_GenBank
Match: WP_012237957.1 (class I SAM-dependent methyltransferase [Sorangium cellulosum] >CAN95489.1 putative SAM-dependent methyltransferases [Sorangium cellulosum So ce56]) HSP 1 Score: 104.4 bits (259), Expect = 4.300e-19 Identity = 70/185 (37.84%), Postives = 91/185 (49.19%), Query Frame = 0 Query: 2 SDELLQELEGHRASRAASSSSSLTVLQGDISALPSLLPSPQALGSFELAVCMGDTLTHLQSMAQVRTVVADAASFLKPGGVLVLHFRDLTYHLEGTDRFLPCQTDENNIFTCVLEYEDGDKREEQKEDRFVLINDLLYSRPDSSSAWTFKKSQFKKLEVPPEKVLEMMQAEGMETSLHPLAFGLV 187 SD LL ELE R A + +++GD+ P A LAVCMGDTL HL S + V + A A L PGG L L FRDLT LEG DRF+P + I TC LEY E V ++DL++ R WT S ++KL + P+ V + + A G+ +A GLV Sbjct: 74 SDRLLAELEARRGPLA------VEIVRGDLLDALERSGPPCA-----LAVCMGDTLPHLGSKSDVERMFAGCARRLAPGGHLALTFRDLTRELEGADRFIPVHDSADVIMTCFLEY----------EPETVKVHDLVHRRGREDGRWTLSASFYRKLRLSPDWVCDRLDAAGLRVIHREIARGLV 237
BLAST of NO18G02610 vs. NCBI_GenBank
Match: WP_030384166.1 (class I SAM-dependent methyltransferase [Streptomyces sp. NRRL S-241]) HSP 1 Score: 104.4 bits (259), Expect = 4.300e-19 Identity = 63/160 (39.38%), Postives = 88/160 (55.00%), Query Frame = 0 Query: 1 MSDELLQELEGHRASRAASSSSSLTVLQGDISALPSLLPSPQALGSFELAVCMGDTLTHLQSMAQVRTVVADAASFLKPGGVLVLHFRDLTYHLEGTDRFLPCQTDENNIFTCVLEYEDGDKREEQKEDRFVLINDLLYSRPDSSSAWTFKKSQFKKLEV 161 +S LL EL GH + A + ++ + DI LP P G+ VCMGDTLTHL S A VR+++ A L+PGG LV+ FRDLT L G DRFLP ++ E+ + TC LEY D D V+++D+L++R S W + + KL + Sbjct: 76 LSRALLDELVGH--AETAGFAGAVRTVHADIL---DALPLPHGSGTAAAIVCMGDTLTHLPSRADVRSLLDSVAGALRPGGHLVVTFRDLTGELRGDDRFLPVRSTEDQLLTCFLEYVDDDT---------VMVHDVLHTR--SEGEWRLQVGSYPKLRL 219
BLAST of NO18G02610 vs. NCBI_GenBank
Match: KYF80831.1 (SAM-dependent methyltransferase [Sorangium cellulosum]) HSP 1 Score: 104.4 bits (259), Expect = 4.300e-19 Identity = 72/186 (38.71%), Postives = 92/186 (49.46%), Query Frame = 0 Query: 2 SDELLQELEGHRASRAASSSSSLTVLQGD-ISALPSLLPSPQALGSFELAVCMGDTLTHLQSMAQVRTVVADAASFLKPGGVLVLHFRDLTYHLEGTDRFLPCQTDENNIFTCVLEYEDGDKREEQKEDRFVLINDLLYSRPDSSSAWTFKKSQFKKLEVPPEKVLEMMQAEGMETSLHPLAFGLV 187 SD+LL EL R + +QGD + AL P +ELAVCMGDTL HL S A V + A A L PGG L L FRDLT LEG DRF+P + I TC LEY E V ++DL+++R WT S ++KL + P+ V ++A G +A GLV Sbjct: 74 SDKLLTELAARRGQLPVET------VQGDLVEALERSGP------VYELAVCMGDTLPHLGSKADVERMFAGCARRLAPGGRLALTFRDLTRELEGVDRFIPVHDSADVIMTCFLEY----------EPETVKVHDLVHTRGREDGRWTLSASFYRKLRLSPDWVSGRLEAAGFRVVHREIARGLV 237
BLAST of NO18G02610 vs. NCBI_GenBank
Match: OON09506.1 (hypothetical protein BSLG_01463 [Batrachochytrium salamandrivorans]) HSP 1 Score: 104.4 bits (259), Expect = 4.300e-19 Identity = 78/230 (33.91%), Postives = 106/230 (46.09%), Query Frame = 0 Query: 2 SDELLQELEGHRASRAASSSSSLTVLQGDI--------------SALPSLLPSPQALGSFELAVCMGDTLTHLQSMAQVRTVVADAASFLKPGGVLVLHFRDLTYHLEGTDRFLPCQTDENNIFTCVLEYEDGDKREEQKEDR--------------------------FVLINDLLYSRPDSSSAWTFKKSQFKKLEVPPEKVLEMMQAEGMETSLHPLAFGLVAAMGV 192 S+ LL EL A+ + S L + GDI S SLLP S EL VCMGDTLTHL S+A+V ++ADA + L PGG L++ FRDLT L GTDRF+P ++DE +FTC LE+E+ + ++DL++ + AW KS +KKL + V +MQ+ G L G+V M V Sbjct: 131 SEALLAELAHEAAAVCPDAVSRLQRVCGDILDSSNFIYEQEQEDSRCSSLLPPAVTASSPELIVCMGDTLTHLASIAEVNALLADAYAALVPGGRLIVQFRDLTQPLHGTDRFIPVRSDERTVFTCFLEWENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDGSGCIIRVHDLVHVK-KGIGAWELCKSWYKKLGLTSNYVSMLMQSHGFHVVLADNDGGMVLLMAV 359
BLAST of NO18G02610 vs. NCBI_GenBank
Match: WP_067354846.1 (class I SAM-dependent methyltransferase [Streptomyces noursei] >ANZ20350.1 putative SAM-dependent methyltransferase [Streptomyces noursei ATCC 11455]) HSP 1 Score: 104.0 bits (258), Expect = 5.600e-19 Identity = 67/175 (38.29%), Postives = 95/175 (54.29%), Query Frame = 0 Query: 2 SDELLQELEGHRASRAASSSSSLTVLQGDI-SALPSLLPSPQALGSFELAVCMGDTLTHLQSMAQVRTVVADAASFLKPGGVLVLHFRDLTYHLEGTDRFLPCQTDENNIFTCVLEYEDGDKREEQKEDRFVLINDLLYSRPDSSSAWTFKKSQFKKLEVPPEKVLEMMQAEGME 176 S LL EL A ++ +L L+ DI AL P+ GS VCMGDTL HL + V ++ D A L+PGG V +RDLT L GTDRFLP ++ ++ + TC LEY D D VL++DLL++R S++ W + S + KL +P ++E +A G+E Sbjct: 87 SAHLLAELAATHAG-TGGAAEALRPLRRDIRGALAEAAPA----GSVAAVVCMGDTLPHLPAKTDVTELLGDVARALRPGGHFVATYRDLTVALHGTDRFLPVRSSDDRLLTCFLEYVDDDT---------VLVHDLLHTR--SATGWEQRTSSYPKLRIPARWLVEQCRAAGLE 245
BLAST of NO18G02610 vs. NCBI_GenBank
Match: WP_093746185.1 (MULTISPECIES: class I SAM-dependent methyltransferase [Streptomyces] >SED24532.1 Methyltransferase domain-containing protein [Streptomyces sp. KS_5] >SEC55793.1 Methyltransferase domain-containing protein [Streptomyces sp. PAN_FS17]) HSP 1 Score: 104.0 bits (258), Expect = 5.600e-19 Identity = 64/174 (36.78%), Postives = 89/174 (51.15%), Query Frame = 0 Query: 1 MSDELLQELEGHRASRAASSSSSLTVLQGDISALPSLLPSPQALGSFELAVCMGDTLTHLQSMAQVRTVVADAASFLKPGGVLVLHFRDLTYHLEGTDRFLPCQTDENNIFTCVLEYEDGDKREEQKEDRFVLINDLLYSRPDSSSAWTFKKSQFKKLEVPPEKVLEMMQAEGM 175 +S LL EL H A A + ++ D+ L P GS VC+GDTLTHL + V + AD A+ L P G V +RDLT L GTDRFLP + E+ I TC LEY D D V+++DL+++R D + WT ++KL + VLE ++ G+ Sbjct: 89 LSRPLLGELAAHAARLPA-----VRAVRADVRGALRELVRP---GSAGAVVCLGDTLTHLPTRGDVAALFADVAAALAPDGTAVFSYRDLTVPLTGTDRFLPVRATEDRIMTCFLEYPD------DYNDYTVVVHDLIHTRADGDADWTLTARSYRKLRLSHAWVLEQLRTAGL 248 The following BLAST results are available for this feature:
BLAST of NO18G02610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO18G02610 ID=NO18G02610|Name=NO18G02610|organism=Nannochloropsis oceanica|type=gene|length=3798bpback to top protein sequence of NO18G02610.1 >NO18G02610.1-protein ID=NO18G02610.1-protein|Name=NO18G02610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=201bpback to top Synonyms
Publications
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