NO16G00650, NO16G00650 (gene) Nannochloropsis oceanica

Overview
NameNO16G00650
Unique NameNO16G00650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1342
Alignment locationchr16:227869..229210 -

Link to JBrowse

Properties
Property NameValue
DescriptionGdp-mannose-epimerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:227869..229210 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR001509Epimerase_deHydtase_N
Homology
[Close]
BLAST of NO16G00650 vs. NCBI_GenBank
Match: EWM24067.1 (gdp-mannose -epimerase [Nannochloropsis gaditana])

HSP 1 Score: 636.3 bits (1640), Expect = 5.900e-179
Identity = 315/373 (84.45%), Postives = 330/373 (88.47%), Query Frame = 0 
Query:    7 PLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKRNEFMTEPEFCDEFLQVDLRELDNCIKASKGCNHVYNLAAEMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEADAWPAKPQEVYGLEKLYHEEMALAYSRDFPMVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSETAVKPLNLGTEEMVSMNKFAEIAMSFENKYLPIKHIPGPQGVRGRNSDNTLIREELGWEPLISIQEGLRETYFWIKGQIEKERAAGIVFDYSSSKVVVQTTDSLDALGGKEKGLVSSIPESDLASNSNAGIQV 380
            PLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWK+NEFM EPEFCDEF  VDLREL+NCIKASKGC+HVYNLAA+MGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKE DAWPAKPQEVYGLEKLYHEEMALAYSRDFP+VSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMS+TA  PLNLGTE+M                           GVRGRNSDNTLIRE LGWEPLISI++GLRETYFWIKGQIEKERAAG+VFDYSSSKVVVQTT+SLDAL  K++   +SIPESD ASN   G+QV
Sbjct:    6 PLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKKNEFMAEPEFCDEFFLVDLRELENCIKASKGCHHVYNLAADMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEGDAWPAKPQEVYGLEKLYHEEMALAYSRDFPLVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSDTATMPLNLGTEQM---------------------------GVRGRNSDNTLIREMLGWEPLISIEDGLRETYFWIKGQIEKERAAGVVFDYSSSKVVVQTTESLDALASKQE-KSNSIPESDSASN---GVQV 347
[Close]
BLAST of NO16G00650 vs. NCBI_GenBank
Match: CBN77708.1 (nad-dependent epimerase/dehydratase [Ectocarpus siliculosus])

HSP 1 Score: 534.6 bits (1376), Expect = 2.400e-148
Identity = 251/345 (72.75%), Postives = 290/345 (84.06%), Query Frame = 0 
Query:   12 KKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKRNEFMTEPEFCDEFLQVDLRELDNCIKASKGCNHVYNLAAEMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEADAWPAKPQEVYGLEKLYHEEMALAYSRDFPMVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSETAVKPLNLGTEEMVSMNKFAEIAMSFENKYLPIKHIPGPQGVRGRNSDNTLIREELGWEPLISIQEGLRETYFWIKGQIEKERAAGIVFDYSSSKVVVQTTDSLDALGGK 357
            +KV + GG GFIGSHLA+RLK +G YVV ADWK NEFM   EFC  F   DLR L NC+ AS GC  VYNLAA+MGGMGFIESNQ VL++NNTM+SSN+LEAAR N A+RYFY+STACVYNEDLQLDPSNPGLKEADAWPAKPQ+ YGLEKLYHEEM  AY+ DFP+ +R+AR+HNVYGP GTWKGGREKAPAAFCRKA+ ST+ FE+WGDGEQTRSFM++DDCVEG +RIM  +  + PLNLGTEEMVSMNKFA IAM FE K LPI+HIPGP+GVRGRNSDNTLIRE+L W P ++I EGLR+TYFWIK Q+E E+AAG   +Y +S+VVVQTT+SL+ L  K
Sbjct:   36 RKVFIGGGAGFIGSHLAKRLKGEGWYVVCADWKANEFMEPKEFCSVFAHTDLRSLPNCVSASVGCEQVYNLAADMGGMGFIESNQCVLLFNNTMISSNILEAARLNEAKRYFYASTACVYNEDLQLDPSNPGLKEADAWPAKPQDTYGLEKLYHEEMCKAYAADFPIETRMARYHNVYGPRGTWKGGREKAPAAFCRKAICSTKDFEMWGDGEQTRSFMFIDDCVEGTIRIMEGDYRL-PLNLGTEEMVSMNKFAAIAMGFEGKDLPIRHIPGPEGVRGRNSDNTLIREKLSWAPSVTIAEGLRKTYFWIKDQVEAEKAAGTGNNYDTSEVVVQTTESLEQLSHK 379
[Close]
BLAST of NO16G00650 vs. NCBI_GenBank
Match: XP_009037231.1 (hypothetical protein AURANDRAFT_69812 [Aureococcus anophagefferens] >EGB07852.1 hypothetical protein AURANDRAFT_69812 [Aureococcus anophagefferens])

HSP 1 Score: 494.2 bits (1271), Expect = 3.600e-136
Identity = 233/341 (68.33%), Postives = 276/341 (80.94%), Query Frame = 0 
Query:   14 VLVAGGGGFIGSHLARRLKKDGNYVVVADWKRNEFMTEPEFCDEFLQVDLRELDNCIKASKGCNHVYNLAAEMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEADAWPAKPQEVYGLEKLYHEEMALAYSRDFPMVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSETAVKPLNLGTEEMVSMNKFAEIAMSFENKYLPIKHIPGPQGVRGRNSDNTLIREELGWEPLISIQEGLRETYFWIKGQIEKERAAGI-VFDYSSSKVVVQTTDSLDAL 354
            V + GGGGFIGS LA  LKK G YV+ ADWK+NEFM  PEFCDEF   DLR   NC+K   GC  VYNLAA+MGGMGFI+SN+SVLM+NNTM+S NVLEAAR  G +RYFYSS+ACVYN+DLQLDP NPGLKEA AWPAKPQ+ YGLEKLY EEM + Y RDF +  R ARFHNVYGP GTWKGGREKAPAAFCRKAV +T  FE+WGDG+QTRSFM++DDCVEG+ +IM S+   +PLNLG++EM+ MN FA++A+SFE+K LPIKHIPGP+GVRGRNSDNT+I+E+LGW P I +  GL++TYFWIK  +EK++AAGI       S++VVQ TD LD L
Sbjct:   29 VAIGGGGGFIGSWLALDLKKKGFYVIAADWKKNEFMEVPEFCDEFHLCDLRLQANCLKVVDGCRDVYNLAADMGGMGFIKSNESVLMYNNTMISFNVLEAARCKGVKRYFYSSSACVYNDDLQLDPDNPGLKEAGAWPAKPQDTYGLEKLYAEEMGIVYGRDFGIKFRCARFHNVYGPRGTWKGGREKAPAAFCRKAVCATSEFEMWGDGKQTRSFMFIDDCVEGIQKIMDSD-CEQPLNLGSDEMIDMNDFAKLALSFESKELPIKHIPGPEGVRGRNSDNTMIKEKLGWAPSIPVAVGLKKTYFWIKDMVEKDKAAGIDTAKLGVSEIVVQKTDELDEL 368
[Close]
BLAST of NO16G00650 vs. NCBI_GenBank
Match: XP_005703429.1 (GDP-D-mannose-3',5'-epimerase [Galdieria sulphuraria] >EME26909.1 GDP-D-mannose-3',5'-epimerase [Galdieria sulphuraria])

HSP 1 Score: 491.1 bits (1263), Expect = 3.100e-135
Identity = 224/346 (64.74%), Postives = 276/346 (79.77%), Query Frame = 0 
Query:   13 KVLVAGGGGFIGSHLARRLKKDGNYVVVADWKRNEFMTEPEFCDEFLQVDLRELDNCIKASKGCNHVYNLAAEMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEADAWPAKPQEVYGLEKLYHEEMALAYSRDFPMVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSETAVKPLNLGTEEMVSMNKFAEIAMSFENKYLPIKHIPGPQGVRGRNSDNTLIREELGWEPLISIQEGLRETYFWIKGQIEKERAAGIVFDYSSSKVVVQTTDSLDALGGKEK 359
            +VLV G GGFIGSHLA++LK+ G YV+ ADWK NE+  + +FCDEFL VDLREL NC+KASK C+HVYNLAA+MGGMGFI+SN SV+++NNTM+S N+LEAARRN  +RYFY+S+AC+Y E+ QLDP NPGLKE+DAWPA+PQ+ YGLEKL  EEMA+ Y RDF M +RI RFHN+YGP+GTWKGGREKAPAAFCRK + S   FE+WGDGEQTRSF Y+DD VEGV+R+M S+ A +PLN+G+EEM+SMN  A++ M FENK L IKHIPGP+GVRGRNS+N L R+ LGWEP + + EGL+ TY WIK QIE+E A G   D   +  VV T    D++  K +
Sbjct:   11 RVLVTGAGGFIGSHLAKKLKEKGQYVIAADWKENEYFKQEDFCDEFLLVDLRELQNCLKASKDCDHVYNLAADMGGMGFIQSNHSVILYNNTMISFNMLEAARRNNVKRYFYASSACIYPENKQLDPKNPGLKESDAWPAQPQDAYGLEKLASEEMAIHYGRDFKMETRIGRFHNIYGPYGTWKGGREKAPAAFCRKCIVSDTEFEMWGDGEQTRSFCYIDDAVEGVIRLMESDFA-EPLNIGSEEMISMNDMAKLIMKFENKELKIKHIPGPEGVRGRNSNNDLCRKVLGWEPKVDLAEGLKRTYIWIKSQIEEESAQGKKNDEYKTSKVVPTHSPTDSVAAKRR 355
[Close]
BLAST of NO16G00650 vs. NCBI_GenBank
Match: XP_002179589.1 (nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1] >EEC48575.1 nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 489.6 bits (1259), Expect = 9.000e-135
Identity = 238/357 (66.67%), Postives = 281/357 (78.71%), Query Frame = 0 
Query:    1 MSNSSTPLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKRNEFMTEPEFCDEFLQVDLRELDNCIKASKGCNHVYNLAAEMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEADAWPAKPQEVYGLEKLYHEEMALAYSRDFPMVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSETAVKPLNLGTEEMVSMNKFAEIAMSFENKYLPIKHIPGPQGVRGRNSDNTLIREELGWEPLISIQEGLRETYFWIKGQIEKERAAGIVFDYSSSKVVVQTTDSLDALGGKE 358
            M   + P   GKKV V GG GFIGSH+ARRLK  G YVVV DWK+NEFM   EFCDEF+  DLR+L+    A +GC  VYNLAA+MGGMGFI SN+SVL +NNT +S N+LEAARRN  + +FYSS+ACVYNE  Q DP+NPGL EADAWPA+PQ++YGLEKLY EEMALAY RDF M  RIARFHN+YGP GTWKGGREKAPAAFCRKA+ STEHFE+WGDG+QTRSF Y+DDCVEGVLR+M S+  V P+NLG+ EMV M +FA+IA+SFE K LPIKHI GP GVRGRNS+N LI E+LGWEP + I++GLR TYFWIK QI+ E   G    YS+S++V Q  D+L  LG ++
Sbjct:    3 MKEFTLPAGEGKKVCVGGGAGFIGSHIARRLKAVGYYVVVVDWKKNEFMENSEFCDEFILGDLRKLEVACSACEGCAQVYNLAADMGGMGFIVSNESVLAFNNTAISMNMLEAARRNKVKDFFYSSSACVYNEAKQEDPANPGLIEADAWPARPQDMYGLEKLYAEEMALAYGRDFDMNVRIARFHNIYGPRGTWKGGREKAPAAFCRKAITSTEHFEMWGDGKQTRSFTYIDDCVEGVLRLMFSDCDV-PINLGSTEMVDMIEFAQIALSFEAKKLPIKHIEGPMGVRGRNSNNKLIMEKLGWEPTMQIKDGLRLTYFWIKEQIDAEGGDGAA--YSTSEIVQQVDDTLMQLGNEK 356
[Close]
BLAST of NO16G00650 vs. NCBI_GenBank
Match: XP_002291793.1 (dual function enzyme: UDP-glucose 4-epimerase [Thalassiosira pseudonana CCMP1335] >EED90644.1 dual function enzyme: UDP-glucose 4-epimerase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 489.6 bits (1259), Expect = 9.000e-135
Identity = 234/352 (66.48%), Postives = 279/352 (79.26%), Query Frame = 0 
Query:    7 PLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKRNEFMTEPEFCDEFLQVDLRELDNCIKASKGCNHVYNLAAEMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEADAWPAKPQEVYGLEKLYHEEMALAYSRDFPMVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSETAVKPLNLGTEEMVSMNKFAEIAMSFENK-YLPIKHIPGPQGVRGRNSDNTLIREELGWEPLISIQEGLRETYFWIKGQIEKERAAGIVFDYSSSKVVVQTTDSLDALGGKE 358
            P   G KV V GG GFIGSH+A+RLK+ G  V V DWK NEFM + EFCDEF+  DLR+L+  +KA K C  VYNLAA+MGGMGFI SN+SVL +NNT +S N+LEAARRN  + +FYSS+ACVYNE  Q DP NPGL E+DAWPA+PQ++YGLEKLY EEMALAY RDFP+  RIARFHN+YGP GTWKGGREKAPAAFCRKA+ S + FE+WGDG+QTRSF Y+DDCVEGVLR+  S+  V P+N+G+ EM+ MN FA+ A+S+ENK +LP+KHI GP GVRGRNS+N LI E+LGWEP   I +GLR+TYFWIKG+IEKE AAG   DYS S+VV Q  DSL  LG +E
Sbjct:   10 PAGNGAKVCVGGGAGFIGSHIAKRLKEAGYKVTVVDWKENEFMEKDEFCDEFILDDLRKLEVAVKACKDCLQVYNLAADMGGMGFICSNESVLSFNNTSISMNMLEAARRNKCKDFFYSSSACVYNEAKQEDPENPGLIESDAWPARPQDMYGLEKLYAEEMALAYGRDFPLNIRIARFHNIYGPRGTWKGGREKAPAAFCRKAITSEKEFEIWGDGKQTRSFTYIDDCVEGVLRLTFSDCDV-PINMGSTEMIDMNDFAKTALSYENKEHLPLKHIEGPMGVRGRNSNNALILEKLGWEPTTKIVDGLRKTYFWIKGEIEKEVAAGSTLDYSKSEVVQQVDDSLMQLGNEE 360
[Close]
BLAST of NO16G00650 vs. NCBI_GenBank
Match: OEU18515.1 (putative bifunctional dTDP-glucose 4,6-dehydratase/UDP-glucuronate decarboxylase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 488.8 bits (1257), Expect = 1.500e-134
Identity = 232/348 (66.67%), Postives = 281/348 (80.75%), Query Frame = 0 
Query:    7 PLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKRNEFMTEPEFCDEFLQVDLRELDNCIKASKGCNHVYNLAAEMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEADAWPAKPQEVYGLEKLYHEEMALAYSRDFPMVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSETAVKPLNLGTEEMVSMNKFAEIAMSFENKYLPIKHIPGPQGVRGRNSDNTLIREELGWEPLISIQEGLRETYFWIKGQIEKERAAGIVFDYSSSKVVVQTTDSLDALG 355
            P   GKKV V GG GFIGSH+A+RLK+ G YV+  DWK NEFM   EFCDEF++ DLR+L+    A K C+ VYNLAA+MGGMGFI SN+SVL +NNT +S N+LEAARRN  + +FYSS+ACVYNE  Q DP+NPGL E+DAWPA+PQ++YGLEKLY EEMALAY RDF +  R+ARFHN+YGP GTWKGGREKAPAAFCRKA+ STEHFE+WGDG+QTRSF Y+DDCVEGVLR+M S+ AV P+N+G+ EMV M +FA IA+SFE+K +PIKHI GP GVRGRNS++ LI E+LGWEP I I +GL++TYFWIKG+IEKE   G   +YS+S++V Q  DSL  LG
Sbjct:   11 PKGEGKKVCVGGGAGFIGSHIAKRLKEAGWYVICVDWKTNEFMKNDEFCDEFIEGDLRKLEVACNACKDCSQVYNLAADMGGMGFIVSNESVLSFNNTAISMNMLEAARRNNVKDFFYSSSACVYNEAKQEDPANPGLIESDAWPARPQDMYGLEKLYSEEMALAYGRDFDINIRLARFHNIYGPCGTWKGGREKAPAAFCRKALTSTEHFEMWGDGKQTRSFTYIDDCVEGVLRLMFSDCAV-PINMGSTEMVDMIEFANIALSFEDKKIPIKHIDGPMGVRGRNSNSKLILEKLGWEPTIKISDGLKKTYFWIKGEIEKE--GGEANEYSTSEIVQQVDDSLMQLG 355
[Close]
BLAST of NO16G00650 vs. NCBI_GenBank
Match: GAX28209.1 (GDP-D-mannose 3', 5'-epimerase [Fistulifera solaris])

HSP 1 Score: 486.5 bits (1251), Expect = 7.600e-134
Identity = 236/354 (66.67%), Postives = 279/354 (78.81%), Query Frame = 0 
Query:    1 MSNSSTPLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKRNEFMTEPEFCDEFLQVDLRELDNCIKASKGCNHVYNLAAEMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEADAWPAKPQEVYGLEKLYHEEMALAYSRDFPMVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSETAVKPLNLGTEEMVSMNKFAEIAMSFENKYLPIKHIPGPQGVRGRNSDNTLIREELGWEPLISIQEGLRETYFWIKGQIEKERAAGIVFDYSSSKVVVQTTDSLDALG 355
            M   + P   GKKV V GG GFIGSH+A+RLK  G YVVV DWK NEFM + EFC+EF+  DLR+L+   +A +GC  VYNLAA+MGGMGFI SN+SVL +NNT +S N+LE ARR G + +FY+S+ACVYNE  Q DP+NPGL E+DAWPA+PQ++YGLEKLY EEMALAY RDF M  RIARFHN+YGP GTWKGGREKAPAAFCRKA+ ST+HFE+WGDG+QTRSF ++DDCVEGVLR+  S+  V P+NLGT EMV M +FA+IAMSFE+K LPIKHI GP GVRGRNS+N LI E+LGWEP I I EGL++TYFWIK QIEKE   G    YS S++V Q  DSL  LG
Sbjct:    1 MKEFTLPQGEGKKVCVGGGAGFIGSHIAKRLKTAGYYVVVVDWKENEFMEKDEFCNEFILDDLRKLEVACRACEGCTQVYNLAADMGGMGFIVSNESVLAFNNTAISMNMLEGARRAGVKDFFYASSACVYNEAKQEDPANPGLIESDAWPARPQDMYGLEKLYAEEMALAYGRDFDMNIRIARFHNIYGPRGTWKGGREKAPAAFCRKALTSTDHFEMWGDGKQTRSFTFIDDCVEGVLRLTFSDCNV-PINLGTTEMVDMIEFAKIAMSFEDKNLPIKHIEGPMGVRGRNSNNVLIMEKLGWEPTIKIAEGLKKTYFWIKEQIEKE--GGDATKYSHSEIVQQVDDSLMQLG 351
[Close]
BLAST of NO16G00650 vs. NCBI_GenBank
Match: GAX17364.1 (GDP-D-mannose 3', 5'-epimerase [Fistulifera solaris])

HSP 1 Score: 485.7 bits (1249), Expect = 1.300e-133
Identity = 236/354 (66.67%), Postives = 278/354 (78.53%), Query Frame = 0 
Query:    1 MSNSSTPLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKRNEFMTEPEFCDEFLQVDLRELDNCIKASKGCNHVYNLAAEMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEADAWPAKPQEVYGLEKLYHEEMALAYSRDFPMVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSETAVKPLNLGTEEMVSMNKFAEIAMSFENKYLPIKHIPGPQGVRGRNSDNTLIREELGWEPLISIQEGLRETYFWIKGQIEKERAAGIVFDYSSSKVVVQTTDSLDALG 355
            M   + P   GKKV V GG GFIGSH+A+RLK  G YVVV DWK NEFM + EFC+EF+  DLR+L+   +A +GC  VYNLAA+MGGMGFI SN+SVL +NNT +S N+LE ARR G + +FY+S+ACVYNE  Q DP+NPGL E+DAWPA+PQ++YGLEKLY EEMALAY RDF M  RIARFHN+YGP GTWKGGREKAPAAFCRKA+ ST+HFE+WGDG+QTRSF ++DDCVEGVLR+  S+  V P+NLGT EMV M +FA+IAMSFE K LPIKHI GP GVRGRNS+N LI E+LGWEP I I EGL++TYFWIK QIEKE   G    YS S++V Q  DSL  LG
Sbjct:    1 MKEFTLPPGEGKKVCVGGGAGFIGSHIAKRLKAAGYYVVVVDWKENEFMEKDEFCNEFILDDLRKLEVACRACEGCTQVYNLAADMGGMGFIVSNESVLAFNNTAISMNMLEGARRAGVKDFFYASSACVYNEAKQEDPANPGLIESDAWPARPQDMYGLEKLYAEEMALAYGRDFDMNIRIARFHNIYGPRGTWKGGREKAPAAFCRKALTSTDHFEMWGDGKQTRSFTFIDDCVEGVLRLTFSDCNV-PINLGTTEMVDMIEFAKIAMSFEEKNLPIKHIDGPMGVRGRNSNNVLIMEKLGWEPTIKIAEGLKKTYFWIKEQIEKE--GGDATKYSHSEIVQQVDDSLMQLG 351
[Close]
BLAST of NO16G00650 vs. NCBI_GenBank
Match: ACM47361.1 (GDP-mannose-3',5'-epimerase [Caragana korshinskii])

HSP 1 Score: 468.8 bits (1205), Expect = 1.600e-128
Identity = 215/350 (61.43%), Postives = 278/350 (79.43%), Query Frame = 0 
Query:   13 KVLVAGGGGFIGSHLARRLKKDGNYVVVADWKRNEFMTEPEFCDEFLQVDLRELDNCIKASKGCNHVYNLAAEMGGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEADAWPAKPQEVYGLEKLYHEEMALAYSRDFPMVSRIARFHNVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSETAVKPLNLGTEEMVSMNKFAEIAMSFENKYLPIKHIPGPQGVRGRNSDNTLIREELGWEPLISIQEGLRETYFWIKGQIEKERAAGIVFDYSSSKVVVQT-----TDSLDALGGKE 358
            ++ + G GGFI SHLARRLK +G+Y++ +DWK+NE MTE  FCDEF  VDLR +DNC+K ++G  HV+NLAA+MGGMGFI+SN SV+M+NNTM+S N++EAAR NG +R+FY+S+AC+Y E  QL+ +N  LKE+DAWPA+PQ+ YGLEKL  EE+   Y++DF +  RI RFHN+YGP+GTWKGGREKAPAAFCRKA+ ST+ FE+WGDG QTRSF ++D+CVEGVLR+  S+   +P+N+G++EMVSMN+ AEI +SFENK +PI HIPGP+GVRGRNSDNTLI+E+LGW P + +++GLR TYFWIK Q+EKE+A G+      S  VVQT       SL A  GKE
Sbjct:   29 RISITGAGGFIASHLARRLKTEGHYIIASDWKKNEHMTEDMFCDEFHLVDLRVMDNCLKVTEGVGHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGVKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEEVCKHYNKDFGIECRIGRFHNIYGPYGTWKGGREKAPAAFCRKAITSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR-EPVNIGSDEMVSMNEMAEIVLSFENKNIPIDHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKAQGLDLSVYGSSKVVQTQAPVQLGSLRAADGKE 377
The following BLAST results are available for this feature:
BLAST of NO16G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24067.15.900e-17984.45gdp-mannose -epimerase [Nannochloropsis gaditana][more]
CBN77708.12.400e-14872.75nad-dependent epimerase/dehydratase [Ectocarpus si... [more]
XP_009037231.13.600e-13668.33hypothetical protein AURANDRAFT_69812 [Aureococcus... [more]
XP_005703429.13.100e-13564.74GDP-D-mannose-3',5'-epimerase [Galdieria sulphurar... [more]
XP_002179589.19.000e-13566.67nad-dependent epimerase/dehydratase [Phaeodactylum... [more]
XP_002291793.19.000e-13566.48dual function enzyme: UDP-glucose 4-epimerase [Tha... [more]
OEU18515.11.500e-13466.67putative bifunctional dTDP-glucose 4,6-dehydratase... [more]
GAX28209.17.600e-13466.67GDP-D-mannose 3', 5'-epimerase [Fistulifera solari... [more]
GAX17364.11.300e-13366.67GDP-D-mannose 3', 5'-epimerase [Fistulifera solari... [more]
ACM47361.11.600e-12861.43GDP-mannose-3',5'-epimerase [Caragana korshinskii][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00650.1NO16G00650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00650.1NO16G00650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00650 ID=NO16G00650|Name=NO16G00650|organism=Nannochloropsis oceanica|type=gene|length=1342bp
ATGAGCAACTCCTCTACCCCTTTGGTGACAGGCAAGAAAGTCCTGGTGGC
CGGCGGCGGCGGCTTCATCGGCTCCCACCTGGCCCGTCGTCTCAAGAAGG
ACGGGAACTATGTCGTGGTGGCCGACTGGAAGCGCAACGAATTCATGACA
GAGCCCGAGTTCTGCGATGAGTTTCTCCAAGTCGATTTGCGGGAACTTGA
CAACTGCATCAAGGCTTCCAAGGGCTGCAACCACGTGTACAATTTAGCTG
CGGAGATGGGCGGAATGGGCTTCATCGAGTCCAATCAGTCCGTGCTCATG
TGGAACAACACCATGGTCTCCTCCAATGTCCTTGAGGCCGCGCGTCGTAA
TGGCGCTGAGCGTTATTTCTACTCCTCGACGGCTTGTGTTTACAACGAGG
ATCTGCAGCTTGACCCGTCCAATCCCGGGTTGAAGGAGGCGGATGCCTGG
CCCGCCAAGCCGCAAGAGGTGTACGGGCTTGAAAAGCTTTACCATGAAGA
AATGGCACTGGCGTACTCCCGGGACTTCCCCATGGTGTCGCGCATTGCTC
Ggtaagtttgacacaggagaggaggggaaagaggggatgacggaatgtgt
atggtcctttctagtcaaagagacttgcccggaagcatcatcactgtcaa
ttgtgttcatcattgacattttcgtaggatgcttcgtcttgtcaatattt
cgcgcagcttttcaccatcccttcctcccattctccccccctctcagATT
CCACAATGTCTACGGCCCATTCGGCACCTGGAAGGGCGGTCGTGAAAAGG
CCCCGGCTGCCTTCTGCCGCAAGGCCGTGGGGAGCACGGAGCACTTCGAA
GTGTGGGGAGATGGGGAGCAGACGCGATCGTTCATGTATGTCGATGATTG
TGTGGAGGGAGTGTTGCGCATCATGATGAGTGAGACGGCGGTCAAGCCCT
TGAACCTCGGCACGGAAGAGATGGTGTCGATGAACAAATTTGCTGAGATT
GCCATGAGCTTCGAAAACAAGTATTTGCCCATCAAGCACATCCCGGGCCC
GCAAGGCGTGCGTGGACGTAACTCTGACAATACTCTCATTCGGGAGGAGC
TTGGCTGGGAGCCTCTCATCTCAATTCAGGAAGGCCTTCGCGAAACCTAC
TTTTGGATCAAGGGACAGATTGAGAAGGAGCGCGCGGCCGGGATAGTGTT
TGACTACTCTTCCTCTAAGGTGGTTGTCCAGACGACGGATTCCCTGGATG
CGCTGGGCGGGAAAGAGAAGGGGTTGGTGAGCAGCATTCCGGAATCGGAC
TTGGCCAGCAATAGCAATGCCGGCATCCAGGTGATTGCTTAG
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protein sequence of NO16G00650.1

>NO16G00650.1-protein ID=NO16G00650.1-protein|Name=NO16G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp
MSNSSTPLVTGKKVLVAGGGGFIGSHLARRLKKDGNYVVVADWKRNEFMT
EPEFCDEFLQVDLRELDNCIKASKGCNHVYNLAAEMGGMGFIESNQSVLM
WNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQLDPSNPGLKEADAW
PAKPQEVYGLEKLYHEEMALAYSRDFPMVSRIARFHNVYGPFGTWKGGRE
KAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCVEGVLRIMMSETAVK
PLNLGTEEMVSMNKFAEIAMSFENKYLPIKHIPGPQGVRGRNSDNTLIRE
ELGWEPLISIQEGLRETYFWIKGQIEKERAAGIVFDYSSSKVVVQTTDSL
DALGGKEKGLVSSIPESDLASNSNAGIQVIA*
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Synonyms
Publications