NO14G01570, NO14G01570 (gene) Nannochloropsis oceanica

Overview
NameNO14G01570
Unique NameNO14G01570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3638
Alignment locationchr14:495238..498875 -

Link to JBrowse

Properties
Property NameValue
DescriptionDNA ligase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:495238..498875 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0003910DNA ligase (ATP) activity
GO:0003824catalytic activity
GO:0003677DNA binding
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
GO:0006281DNA repair
GO:0009058biosynthetic process
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036599DNA_ligase_N_sf
IPR012340NA-bd_OB-fold
IPR012308DNA_ligase_ATP-dep_N
IPR012310DNA_ligase_ATP-dep_cent
IPR012309DNA_ligase_ATP-dep_C
Homology
BLAST of NO14G01570 vs. NCBI_GenBank
Match: OSD03402.1 (ATP-dependent DNA ligase [Trametes coccinea BRFM310])

HSP 1 Score: 542.0 bits (1395), Expect = 4.000e-150
Identity = 313/672 (46.58%), Postives = 417/672 (62.05%), Query Frame = 0
Query:  325 LPYQTLTNVLEAVEAVTGRLEITDIVRELFAKTI----ECCPTDLPVLLYLLCGKIGPAYEAVELGIGDKNIVDALVKGLGCSSASLNQKGEGADGDLGTAAQRAKGSQRTLNFGAKPNPLTSQQVLQGFRDVAACAGGKSMTQKIDIIRKLLMRCAKEGAEVKFLVRGLQTKLRCRLAEPTVLTALSQAFVQTPPVLNAVVEEEMSSLAEATALAHGVAVLCNPKAGRAEKWEAAEAVVKQAYSECPNYDRLVAALLSAPLPHVLQTCRLAPGVPVKPMLAKAQDSFQDVLRRMQGLHFTMEYKYDGERAQVHLLPDGSFKIFSRNSEDTTTKYPDLLAVLPQALRAGTTSFVIDAEAVAIDPDSGKLLPFQILSTRKRKNEKVEDVKVQVVLYAFDILFLNDRPVLQEPLLRRRALLRDAFVPVPGKFDFAISLDHHENGDTSAIEAFLDEAVAGNCEGLMIKTLE-QNATYEPTKRSLNWLKLKKDYLSGGASGGGRGPADSLDLVVLGGNHGQGKRVGWYGAFLLACYDSETEEYQSVCKIGTGFSEEFLAAMKPQLDVLILPGGKPGYYNTSLDCDVWFEPKIVWEVRAADLSVSPAHKGALDKVEKGKGIALRFPRFIRNRADKAPEDATSAEQIAEAYRSQALVEATLTNGGGKGKGAQDEDDDW 992
            +PY  L  V   +EA T R+E T ++       I    +     L   +YL   ++ P Y  +ELGIG+  ++ A+ +  G S A +    +  +GDLG  A  +K SQ+TL    KP PLT   V +  +++A  +G  S  +K+ II KLL  C  +G E K++VR L+ KLR   AE TVL AL+ A         AV+ E+ SS    +            K   A + E A +++KQ YSE PNYD ++ ALL   +  + + C+L PGVP+KPMLAK   +  +VL + +G  FT EYKYDGERAQVH L DG+  +FSRNSED + KYPDL+  LP+ ++ GT +FV DAEAVAID D+GKL+PFQ LS RKRK+ KVED+KV+V L+AFD+L+LN  P+LQ+ L  RR LLR+ F PV G+F FA + D      T  I+AFL+E+V   CEGLM+K L  + + Y+P++R++NWLKLKKDYL+        G  DSLDLVV+GG +G+GKR   YGAFLLACYDS++EEYQ++CKIGTGFS+E L A    L  L +   +          DVWFEPKIVWEV  ADLS+SP +  A    ++ +GI+LRFPRFIR R DKA +DAT  EQIAE Y+ QAL ++     G KGKGA  +D  W
Sbjct:   61 VPYAALAKVFSLIEATTKRIEKTSLLTSFLLLVIRRRAKGDTQSLTQAVYLCINRLCPDYIGIELGIGESLLIKAISESTGRSMAVVKADLK-KEGDLGLVAMNSKNSQKTL---FKPKPLTLPNVFKNLKEIALSSGHSSQNKKVSIITKLLASC--QGQEAKYIVRSLEGKLRIGNAERTVLVALAHA---------AVLAEQDSSNKRVS------------KDKLAARLEEAASIIKQVYSELPNYDLVIPALLDVGIDRLREVCKLTPGVPLKPMLAKPTKAIGEVLDKFEGQKFTCEYKYDGERAQVHKLEDGTIAVFSRNSEDMSKKYPDLMEQLPRCIKEGTKTFVFDAEAVAIDKDTGKLMPFQELSRRKRKDVKVEDIKVRVCLFAFDLLYLNGEPLLQQDLAHRRDLLREHFQPVDGEFQFAKASDCE---TTDEIQAFLEESVKDGCEGLMVKMLHGELSHYQPSRRTVNWLKLKKDYLA--------GVGDSLDLVVVGGYYGKGKRTNVYGAFLLACYDSDSEEYQTICKIGTGFSDEALQAHYETLKPLEMATPRGDIKVGGAKPDVWFEPKIVWEVLTADLSLSPIYTAAQGLADE-RGISLRFPRFIRVRDDKAADDATGPEQIAEMYQRQALAQSK----GKKGKGADADDGFW 689          
BLAST of NO14G01570 vs. NCBI_GenBank
Match: KNE56721.1 (DNA ligase I, ATP-dependent (dnl1) [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 540.8 bits (1392), Expect = 8.800e-150
Identity = 308/682 (45.16%), Postives = 407/682 (59.68%), Query Frame = 0
Query:  312 IEEIRELTPGYPSLP--YQTLTNVLEAVEAVTGRLEITDIVRELFAKTIECCPTDLPVLLYLLCGKIGPAYEAVELGIGDKNIVDALVKGLGCSSASLNQKGEGADGDLGTAAQRAKGSQRTLNFGAKPNPLTSQQVLQGFRDVAACAGGKSMTQKIDIIRKLLMRCAKEGAEVKFLVRGLQTKLRCRLAEPTVLTALSQAFVQTPPVLNAVVEEEMSSLAEATALAHGVAVLCNPKAGRAEKWEAAEAVVKQAYSECPNYDRLVAALLSAPLPHVLQTCRLAPGVPVKPMLAKAQDSFQDVLRRMQGLHFTMEYKYDGERAQVHLLPDGSFKIFSRNSEDTTTKYPDLLAVLPQALRAGTTSFVIDAEAVAIDPDSGKLLPFQILSTRKRKNEKVEDVKVQVVLYAFDILFLNDRPVLQEPLLRRRALLRDAFVPVPGKFDFAISLDHHENGDTSAIEAFLDEAVAGNCEGLMIKTLEQNATYEPTKRSLNWLKLKKDYLSGGASGGGRGPADSLDLVVLGGNHGQGKRVGWYGAFLLACYDSETEEYQSVCKIGTGFSEEFLAAMKPQLDVLILPGGKPGYYNTSLDCDVWFEPKIVWEVRAADLSVSPAHKGALDKVEKGKGIALRFPRFIRNRADKAPEDATSAEQIAEAYRSQALVEATLTNGGGKGKGAQDEDDDW 992
            ++E  ++ P   S P  Y  L  + EAVE  T RLEI  I+ +   K I+    DL  ++YL   ++GP YE +ELGIG+  +V A+ +  G +   + +   G  GDLGT AQ+++G Q T+    +P PL   +V +  +++A   GG S   K+D I+ LL+ C   G E KFLVR L+ KLR  LAE TVL AL+ AFV                                 K       +AAE  +K  YSE P+YD +V ALL  P+  +   C L PG+P+KPMLA    +  +VL R +G  FT E+KYDGERAQ+HLL  G   I+SRNSE  + KYPD++  L +  + GT SFV+D EAVA D +   +LPFQ+LSTRKRK+     +KVQV ++ FD+L+LN   +L+  L  RRALL D F  +PG+F FA S++  E  D   I+AFLD++V GNCEGLM+KTLE  ++YEP+KRS NWLK+KKDYL         G  DSLDLVV+GG  G+GKR G YG FLLA YD   EEYQS+CKIGTGFSEE LA +   L   I+   +  Y       D+WF+P  VWEV+AADLS+SP +K  +  V+  KGI+LRFPRFIR R DK PEDAT+ EQ+A+ Y+ Q +  A  T GG        EDD++
Sbjct:  183 MDEDEDVEPPAVSEPATYADLCEMFEAVEKTTKRLEIASILTKFLIKIIKNSADDLLAIIYLCINRLGPEYEGLELGIGESILVKAIAEATGRTLQKI-RADLGTVGDLGTVAQQSRGHQSTM---FQPKPLQVPRVFKTLKEIAKITGGSSQKIKVDKIKTLLVSC--RGNEAKFLVRSLEGKLRIGLAERTVLVALAHAFVYR-----------------------------KKKHPPDSDLKAAEETIKSVYSELPSYDLIVPALLKYPVKSLPDHCHLTPGIPLKPMLAHPTKAISEVLDRFEGKPFTCEFKYDGERAQIHLLESGKTLIYSRNSEKLSPKYPDVMGRLDKIGKEGTFSFVLDCEAVAWDREQQCILPFQVLSTRKRKDVTEASIKVQVCIFVFDLLYLNGESLLRHTLKARRALLLDHFSEIPGEFQFAKSMESRELDD---IQAFLDDSVVGNCEGLMVKTLEDESSYEPSKRSRNWLKVKKDYL--------EGVGDSLDLVVIGGFTGKGKRTGVYGGFLLASYDPGNEEYQSICKIGTGFSEEMLAQLAEALKAHIIAAPRSYYNLGDAKADIWFDPVQVWEVKAADLSISPVYKSGVGLVDPNKGISLRFPRFIRIRDDKKPEDATTGEQVADMYQRQQINNAKQTKGG--------EDDEY 810          
BLAST of NO14G01570 vs. NCBI_GenBank
Match: CDS18369.1 (DNA ligase 1 [Echinococcus granulosus])

HSP 1 Score: 540.4 bits (1391), Expect = 1.200e-149
Identity = 297/676 (43.93%), Postives = 413/676 (61.09%), Query Frame = 0
Query:  325 LPYQTLTNVLEAVEAVTGRLEITDIVRELFAKTIECCPTDLPVLLYLLCGKIGPAYEAVELGIGDKNIVDALVKGLGCSSASLNQKGEGADGDLGTAAQRAKGSQRTLNFGAKPNPLTSQQVLQGFRDVAACAGGKSMTQKIDIIRKLLMRCAKEGAEVKFLVRGLQTKLRCRLAEPTVLTALSQAFVQTPPVLNAVVEEEMSSLAEATALAHGVAVLCNPKAGRAEKWEA-AEAV---VKQAYSECPNYDRLVAALLSAPLPHVLQTCRLAPGVPVKPMLAKAQDSFQDVLRRMQGLHFTMEYKYDGERAQVHLLPDGSFKIFSRNSEDTTTKYPDLLAVLPQAL------------------------RAGTTSFVIDAEAVAIDPDSGKLLPFQILSTRKRKNEKVEDVKVQVVLYAFDILFLNDRPVLQEPLLRRRALLRDAFVPVPGKFDFAISLDHHENGDTSAIEAFLDEAVAGNCEGLMIKTLEQNATYEPTKRSLNWLKLKKDYLSGGASGGGRGPADSLDLVVLGGNHGQGKRVGWYGAFLLACYDSETEEYQSVCKIGTGFSEEFLAAMKPQLDVLILPGGKPGY-YNTSLDCDVWFEPKIVWEVRAADLSVSPAHKGALDKVEKGKGIALRFPRFIRNRADKAPEDATSAEQIAEAYRSQALVE 972
            +PY      LE +E ++ RL+I +++   +       P +LP+ +Y+   ++GP+YE +ELGIG+  ++ AL    G S+  +  +     GDLG  A+  K  Q+T+    KP PLT QQV +  ++VA   G  S T+K+ +I+ LL+ C +  +E K+L+R LQ KLR  LAE +VL AL QA   TP           + LA+   L   V        G AE W+A  E V   VKQAY++CPNY+++V +LL      V + C + PG+P++PMLA       +V +R     FT EYKYDGERAQVHLL DGS +++SRN EDTT+KYPD++  L  ++                         +  T+F++D+EAVA D ++ ++LPFQ+LSTRKRK+ + EDVKV+V +YAFD+L+LN   + ++P  +RR LLR  F  +PGKF  A  LD   + DT  I  F+DE++ GNCEGLM+KTL+++ATYE  KRS NWLKLKKDYL         G  D+LDLVV+GG HG GKR G YG FLLACY+ + EEYQ++CK+GTG  +E LA +       I+P  K  Y Y  +L+ D WFEP  VWEV+AAD+S+SPAHK A    +  KG++LRFPRF+R R DK PE+AT+A Q+ E YR Q  ++
Sbjct:  153 VPYIAFAKTLECIEGISSRLKIIEVLSNFYRSVGVLSPKELPICIYMSINRLGPSYEGLELGIGESLLIKALTLTTGASNIRIKSELNRL-GDLGAVAEAIKSRQQTM---FKPKPLTLQQVFERLKEVAFMVGNASQTKKVKLIQSLLVACRE--SEAKYLIRSLQGKLRIGLAEQSVLAALGQAVALTP------FHSVQALLADGQPLTANVLNTSLGARGGAEAWKAYCEVVVGHVKQAYAQCPNYEKIVHSLLEDGPDDVHKRCCIIPGIPIRPMLAHPTHGVTEVFKRFDQADFTCEYKYDGERAQVHLLLDGSVRVYSRNQEDTTSKYPDIVNSLVDSVLKNAKLTDEACKLLGSIDTTAHEENSSLTTFILDSEAVAWDVNAAQILPFQVLSTRKRKDVQEEDVKVRVCIYAFDLLYLNGVSLTEQPFRKRRELLRLVFPTLPGKFMLATFLD---SSDTDKIARFMDESIKGNCEGLMLKTLDRDATYEIAKRSRNWLKLKKDYL--------EGVGDTLDLVVIGGFHGTGKRTGRYGGFLLACYNPDDEEYQTICKVGTGLKDEDLANLSDFFKDHIIPSAKTYYQYTKNLEPDHWFEPVQVWEVKAADISISPAHKAAAGMADPEKGLSLRFPRFLRVREDKKPEEATTAAQVYEMYRDQEQIK 805          
BLAST of NO14G01570 vs. NCBI_GenBank
Match: KFB45092.1 (AGAP009222-PA-like protein [Anopheles sinensis])

HSP 1 Score: 540.0 bits (1390), Expect = 1.500e-149
Identity = 292/668 (43.71%), Postives = 413/668 (61.83%), Query Frame = 0
Query:  325 LPYQTLTNVLEAVEAVTGRLEITDIVRELFAKTIECCPTDLPVLLYLLCGKIGPAYEAVELGIGDKNIVDALVKGLGCSSASLNQKGEGADGDLGTAAQRAKGSQRTLNFGAKPNPLTSQQVLQGFRDVAACAGGKSMTQKIDIIRKLLMRCAKEGAEVKFLVRGLQTKLRCRLAEPTVLTALSQAFVQTPPVLNAVVEEEMSSLAEATALAHGVAVLCNPKAGRAEKWEAAEAVVKQAYSECPNYDRLVAALLSAPLPHVLQTCRLAPGVPVKPMLAKAQDSFQDVLRRMQGLHFTMEYKYDGERAQVHLLPDGSFKIFSRNSEDTTTKYPDLLAVLPQALRAGTTSFVIDAEAVAIDPDSGKLLPFQILSTRKRKNEKVEDVKVQVVLYAFDILFLNDRPVLQEPLLRRRALLRDAFVPVPGKFDFAISLDHHENGDTSAIEAFLDEAVAGNCEGLMIKTLEQNATYEPTKRSLNWLKLKKDYLSGGASGGGRGPADSLDLVVLGGNHGQGKRVGWYGAFLLACYDSETEEYQSVCKIGTGFSEEFLAAMKPQLDVLILPGGKPGY-YNTSLDCDVWFEPKIVWEVRAADLSVSPAHKGALDKVEKGKGIALRFPRFIRNRADKAPEDATSAEQIAEAYRSQALVEATLTNGGGKGKGAQDEDDDW 992
            +PY  L    + +E  +GRL + +I+   F   I   P+DL   +YL   ++ PAYE VELGI + +++ A+ +  G S A +    + + GDLG  A+++K SQR +    +P PLT + V    R++A   G  S+ +K+D I+ + + C    +E +F++R L  KLR  LAE ++L AL+QA   TPP LN  V   +S   EA + A               + +     +K  Y +CPNY+++V  LL   +  +++ C + PG P+KPMLA      Q+VL+R  G+ FT E+KYDGERAQ+HLL DGS +IFSRN E+ T+KYPD++A L         S ++D EAVA DP+  ++LPFQ+LSTRKRK+    D+KVQV ++ FD+L+LN +P++++P   RR LL D F PV G++ +A  LD     D   ++ FL+EAV GNCEGLM+KTL+++ATYE  KRS NWLKLKKDYLS        G  DSLDLVV+GG  G+GKR G YG FLLACYD E EEYQ++CKIGTGFS++ L      L+  ++P  KP Y Y  +L  D WFE   VWEV  ADLS+SP H+ A+  ++  KGI+LRFPRFIR R DK P DAT+A Q++E Y +Q  ++        + +G +D ++D+
Sbjct:  258 VPYLALARTFQVIEETSGRLRMIEILSNYFRSVILLSPSDLLASVYLCLNQLAPAYEGVELGIAEFSLMKAIAQSTGRSLAQIKADAQ-STGDLGLVAEQSKSSQRMM---FRPAPLTVETVFTKLREIARMTGAASIAKKMDKIQSMFVAC--RHSESRFVIRSLAGKLRIGLAEQSLLQALAQACAHTPPHLNPPVVNALSGEGEARSKA---------------RVDEIALTLKTVYCQCPNYNQIVPVLLEHGIDELVERCPMRPGTPLKPMLAHPTKGVQEVLQRFDGIDFTCEWKYDGERAQIHLLADGSVQIFSRNQENNTSKYPDIIARLELTRTDKVESAILDCEAVAWDPEKQQILPFQVLSTRKRKDANEADIKVQVCVFMFDLLYLNGKPLVEKPFQTRRELLYDHFRPVEGQWKYATCLD---TNDLDELQRFLEEAVRGNCEGLMVKTLQRDATYEIAKRSRNWLKLKKDYLS--------GVGDSLDLVVIGGYRGRGKRTGTYGGFLLACYDDENEEYQTICKIGTGFSDDDLQRHTEFLNGHVIPKPKPYYRYEANLAPDEWFEAVQVWEVLCADLSLSPVHQAAIGIIDPEKGISLRFPRFIRIRDDKGPTDATNARQVSEMYLNQDQIK-------NQAQGGRDAEEDF 886          
BLAST of NO14G01570 vs. NCBI_GenBank
Match: XP_014294490.1 (DNA ligase 1 [Halyomorpha halys])

HSP 1 Score: 540.0 bits (1390), Expect = 1.500e-149
Identity = 301/674 (44.66%), Postives = 420/674 (62.31%), Query Frame = 0
Query:  324 SLPYQTLTNVLEAVEAVTGRLEITDIVRELFAKTIECCPTDLPVLLYLLCGKIGPAYEAVELGIGDKNIVDALVKGLGCSSASLNQKGEGAD-GDLGTAAQRAKGSQRTLNFGAKPNPLTSQQVLQGFRDVAACAGGKSMTQKIDIIRKLLMRCAKEGAEVKFLVRGLQTKLRCRLAEPTVLTALSQAFVQTPPVLNAVVEEEMSSLAEATALAHGVAVLCNPKAGRAEKWEAA----EAVVKQAYSECPNYDRLVAALLSAPLPHVLQTCRLAPGVPVKPMLAKAQDSFQDVLRRMQGLHFTMEYKYDGERAQVHLLPDGSFKIFSRNSEDTTTKYPDLLAVLPQALRAGTTSFVIDAEAVAIDPDSGKLLPFQILSTRKRKNEKVEDVKVQVVLYAFDILFLNDRPVLQEPLLRRRALLRDAFVPVPGKFDFAISLDHHENGDTSAIE---AFLDEAVAGNCEGLMIKTLEQNATYEPTKRSLNWLKLKKDYLSGGASGGGRGPADSLDLVVLGGNHGQGKRVGWYGAFLLACYDSETEEYQSVCKIGTGFSEEFLAAMKPQLDVLILPGGKPGY-YNTSLDCDVWFEPKIVWEVRAADLSVSPAHKGALDKVEKGKGIALRFPRFIRNRADKAPEDATSAEQIAEAYRSQALVEATLTNGGGKGKGAQDED 989
            ++PY  L    E +E ++ RL+I +I+   F   I   P DL   +YL   +I PA+E +ELG+ + N++ A+ +  G S A +  K + A  GDLG  A+++K SQRT+     P PLT Q V    +D+A   G  S  +K+D I  +L+ C  +G+EV++L+R L  KLR  LAE +VL AL+QA++ TPP      EE    +  AT            K    EK++A       ++K  Y ECPNY+ ++  LL   L  +   C+L PGVP+KPMLA      Q+VL+R + L FT E+KYDGERAQ+HL  DG   I+SRN E+ T+KYPD+++ L   L+    S ++D EAVA D ++ K+ PFQ+L+TRKRK+    ++KVQV ++ FD+L+LN   +++EPL++RR LLR+ F+ V G++ FA SL      DTSA+E    FL+E+V GNCEGLM+KTLE++ATYE  KRS NWLKLKKDY+         G  DS+D+VV+GG  G+GKR G YG FLLACYD E EEYQ++CKIGTGFS+E L      L   ++   K  Y Y +SL+ D WF+P  VWE++ ADLS+SP H+ A+  V+  KGI+LRFPRF+R R DK+ E ATSA QIA+ Y SQ +++    N   + K   +ED
Sbjct:  270 TVPYSALARTFEKIEEISARLKIVEILSNYFRSVIVLSPNDLLPSVYLCLNRIAPAFEGIELGVAETNLMKAIAQATGRSMAQI--KSDAASLGDLGLVAEQSKSSQRTM---FTPPPLTVQSVFNKLKDIALMTGHASQGKKVDKIHSMLVAC--KGSEVRYLIRSLAGKLRIGLAEQSVLQALAQAYLMTPP-----SEEFPPEVINAT------------KKLSTEKFKAKLEEYSLILKTTYCECPNYNLIIPVLLKEGLLALPDHCKLTPGVPLKPMLAHPTKGVQEVLKRFEDLKFTCEWKYDGERAQIHLSEDGKISIYSRNQENNTSKYPDIISRLKSTLKDSVKSCILDTEAVAWDLETHKIRPFQVLTTRKRKDANESEIKVQVCVFMFDLLYLNGESLVKEPLMKRRELLRENFLEVEGQWSFATSL------DTSAMEEVQEFLEESVKGNCEGLMVKTLEEDATYEIAKRSRNWLKLKKDYID--------GVGDSIDVVVIGGYLGRGKRTGHYGGFLLACYDPENEEYQTLCKIGTGFSDEDLQNHSEFLKNHVIESAKSYYRYESSLEPDHWFDPVQVWEIKCADLSLSPVHRAAIGIVDPEKGISLRFPRFLRVREDKSVEQATSARQIADMYHSQDIIK----NQQNESKKISEED 901          
BLAST of NO14G01570 vs. NCBI_GenBank
Match: PCH33668.1 (ATP-dependent DNA ligase [Wolfiporia cocos MD-104 SS10])

HSP 1 Score: 539.3 bits (1388), Expect = 2.600e-149
Identity = 320/700 (45.71%), Postives = 429/700 (61.29%), Query Frame = 0
Query:  297 STNKAKAAAATTRRIIEEIRELTPGYPSLPYQTLTNVLEAVEAVTGRLEITDIVRELFAKTIECC----PTDLPVLLYLLCGKIGPAYEAVELGIGDKNIVDALVKGLGCSSASLNQKGEGADGDLGTAAQRAKGSQRTLNFGAKPNPLTSQQVLQGFRDVAACAGGKSMTQKIDIIRKLLMRCAKEGAEVKFLVRGLQTKLRCRLAEPTVLTALSQAFVQTPPVLNAVVEEEMSSLAEATALAHGVAVLCNPKAGRAEKWEAAEAVVKQAYSECPNYDRLVAALLSAPLPHVLQTCRLAPGVPVKPMLAKAQDSFQDVLRRMQGLHFTMEYKYDGERAQVHLLPDGSFKIFSRNSEDTTTKYPDLLAVLPQALRAGTTSFVIDAEAVAIDPDSGKLLPFQILSTRKRKNEKVEDVKVQVVLYAFDILFLNDRPVLQEPLLRRRALLRDAFVPVPGKFDFAISLDHHENGDTSAIEAFLDEAVAGNCEGLMIKTLEQNAT-YEPTKRSLNWLKLKKDYLSGGASGGGRGPADSLDLVVLGGNHGQGKRVGWYGAFLLACYDSETEEYQSVCKIGTGFSEEFLAAMKPQLDVLILPGGKPGYYNTSLDCDVWFEPKIVWEVRAADLSVSPAHKGALDKVEKGKGIALRFPRFIRNRADKAPEDATSAEQIAEAYRSQALVEATLTNGGGKGKGAQDEDDDW 992
            +T  A+AA + T+ +  +I+        +PY  L  V   +EA T RLE T ++   F   I+       T L   +YL   ++ P Y  +ELGIG+  ++ A+ +  G S AS+    +  +GDLG  A+ +K SQ+T+    KP PLT   V    +++A  +G  S ++K+ I++KLL  C  +  E K++VR L+ KLR   AE TVL AL+ AFV        + E+E ++               NP    A + E + ++VK  YSE P+YD +V ALL   +  +   C+L PGVP+KPMLAK   +  ++L R +   FT EYKYDGERAQVH L DG+  +FSRNSED + KYPDL   LP  ++  T SFV+DAEAVAID D+GKL+PFQ LS RKRK+ KVED++V+V L+AFD+L++N  P+L +PL+ RR LLR+ F  VPG+F+FA S D      T  I+AFL+E+V   CEGLM+K LE +A+ Y+P++RS+NWLKLKKDYL+        G  DSLDLVV+GG +G+GKR   YGAFLLACYD++ EEYQ++CKIGTGFSEE L A    L  L +   +          DVWFEPK+VWEV  ADLS+SP +  A   VE  +GI+LRFPRFIR R DK+  DAT  EQIAE Y  QAL +      GGK K    EDD W
Sbjct:  191 ATKSAQAALSKTQEV--DIKGGWNVGDPVPYAALAKVFSLIEATTKRLEKTALLTAFFLLVIQRTGKGDTTSLLQAVYLCINRLCPDYVGIELGIGESLLIKAISESTGRSLASIKADLK-VEGDLGLVAKNSKNSQKTI---FKPKPLTLPFVFSNLKEIALSSGNSSQSKKVSIVQKLLAAC--QDQEAKYIVRSLEGKLRIGNAERTVLVALAHAFV--------LAEQERANKR------------LNPDK-LAARLEGSVSIVKSVYSELPSYDLVVPALLEVGIDKLQDKCKLTPGVPLKPMLAKPTKAIGELLDRFENKRFTCEYKYDGERAQVHKLEDGTVSVFSRNSEDMSKKYPDLTEQLPHCIKDITKSFVLDAEAVAIDKDTGKLMPFQELSKRKRKDVKVEDIQVRVCLFAFDLLYVNGEPLLHKPLVERRQLLREHFQLVPGEFNFAKSSD---GETTDEIQAFLEESVKDGCEGLMVKMLEGDASYYQPSRRSVNWLKLKKDYLA--------GVGDSLDLVVVGGYYGKGKRTNVYGAFLLACYDADAEEYQTICKIGTGFSEEALQAHYETLKPLEMTKVRGDVKVGGAKPDVWFEPKVVWEVLTADLSLSPIYTAAQGLVE-DRGISLRFPRFIRVRDDKSANDATGPEQIAEMYERQALAQK-----GGKKKKGDAEDDFW 844          
BLAST of NO14G01570 vs. NCBI_GenBank
Match: CBN75600.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 538.9 bits (1387), Expect = 3.400e-149
Identity = 318/750 (42.40%), Postives = 432/750 (57.60%), Query Frame = 0
Query:  325 LPYQTLTNVLEAVEAVTGRLEITDIVRELFAKTIECCPTDLPVLLYLLCGKIGPAYEAVELGIGDKNIVDALVKGLGCSSASLNQKGEGADGDLGTAAQRAKGSQRTLNFGAKPNPLTSQQVLQGFRDVAACAGGKSMTQKIDIIRKLLMRCAKEGAEVKFLVRGLQTKLRCRLAEPTVLTALSQAFVQTPPVLNAVVEEEMSSL-------------------------------AEATA------------------------------------------------LAHGVAVLCNPKAGRAEKWEAAEAVVKQAYSECPNYDRLVAALLSAPLPHVLQTCRLAPGVPVKPMLAKAQDSFQDVLRRMQGLHFTMEYKYDGERAQVHLLPDGSFKIFSRNSEDTTTKYPDLLAVLPQALRAGTTSFVIDAEAVAIDPDSGKLLPFQILSTRKRKNEKVEDVKVQVVLYAFDILFLNDRPVLQEPLLRRRALLRDAFVPVPGKFDFAISLDHHENGDTSAIEAFLDEAVAGNCEGLMIKTLEQNATYEPTKRSLNWLKLKKDYLSGGASGGGRGPADSLDLVVLGGNHGQGKRVGWYGAFLLACYDSETEEYQSVCKIGTGFSEEFLAAMKPQLDVLILPGGKPGYYNT--SLDCDVWFEPKIVWEVRAADLSVSPAHKGALDKV--EKGKGIALRFPRFIRNRADKAPEDATSAEQIAEAYRSQALVEATLTNGGGKGKGAQDEDDDW 992
            +P+  +  + + VE  + RLEI +I+R      I   P DL   +YL C ++ P+YE +ELGIGD  +  ++    G S+  +    + A GDLG  AQ +  SQ TL+FG     L+++  L+ +R +A   G  S   KI+ I+K+L+ C  +G + K+++RGLQ K+R  L + TV+ +LS A V  P    AV+  E                                    +AT                                                 +    A+   P +   ++ E A  +VKQAYSEC N D+++ A+LS PL  + Q CRL PGVPV PMLAK   S  +VL+R+ G  FT EYKYDG RAQVH   DGS + FSRNS+D++++ PDL+ V+   ++ G +S+VID E VA D ++G LLPFQ+LSTR RK+   EDVKV+V++ AFD+L+LN + +LQ+PL +RR LLR  F  V G+F FA  +DH E+GDT  IE FL EAV GNCEGLM+KTL  N++YEP+KRSLNWLKLKKDYL   A GGG G  DSLDLV +G   G+GKR G YGA+LLACY+ + EEYQSVCKIGTGF++E L +   +L    +   +P YYN   SL  DVW  P  VWEV+ ADLS SP HK A+ K+  E  +GI++RFPR +R R DK PE AT+++QI + Y  Q +V++     GG+   A   DDDW
Sbjct:  306 VPFSAVAEMFDRVEQTSKRLEIQEILRGFLCTVIALTPEDLVPCVYLACNQLAPSYEGMELGIGDMVLQKSIQGATGRSAKDIKAAAQKA-GDLGEVAQHSTKSQGTLSFGQTIKALSARDGLERYRAIARVKGNSSGEDKINRIKKMLVSC--KGLQAKYIIRGLQGKMRVGLTDTTVMVSLSHAAVTCPS--EAVLAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVDATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGLIPVARALRDTPASHLEQRLELACQLVKQAYSECRNLDQIIKAILSTPLYRLQQACRLTPGVPVLPMLAKPTKSIGEVLQRLSGQEFTCEYKYDGVRAQVHHKEDGSLRFFSRNSKDSSSELPDLIPVMKDCVKEGVSSYVIDTEVVAYDRETGNLLPFQMLSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQSLLQKPLKQRRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQ--ADGGGVG--DSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVE-QRPRYYNVADSLSPDVWLAPHKVWEVKCADLSKSPVHKAAIGKIAQEPDRGISIRFPRLLREREDKDPEQATTSDQILDMYEGQDVVKSNA--AGGQANNA--ADDDW 1041          
BLAST of NO14G01570 vs. NCBI_GenBank
Match: OJT04678.1 (DNA ligase 1 [Trametes pubescens])

HSP 1 Score: 538.5 bits (1386), Expect = 4.400e-149
Identity = 314/703 (44.67%), Postives = 433/703 (61.59%), Query Frame = 0
Query:  297 STNKAKAAAATTRRIIEEIRELTPGYPS---LPYQTLTNVLEAVEAVTGRLE----ITDIVRELFAKTIECCPTDLPVLLYLLCGKIGPAYEAVELGIGDKNIVDALVKGLGCSSASLNQKGEGADGDLGTAAQRAKGSQRTLNFGAKPNPLTSQQVLQGFRDVAACAGGKSMTQKIDIIRKLLMRCAKEGAEVKFLVRGLQTKLRCRLAEPTVLTALSQAFVQTPPVLNAVVEEEMSSLAEATALAHGVAVLCNPKAGRAEKWEAAEAVVKQAYSECPNYDRLVAALLSAPLPHVLQTCRLAPGVPVKPMLAKAQDSFQDVLRRMQGLHFTMEYKYDGERAQVHLLPDGSFKIFSRNSEDTTTKYPDLLAVLPQALRAGTTSFVIDAEAVAIDPDSGKLLPFQILSTRKRKNEKVEDVKVQVVLYAFDILFLNDRPVLQEPLLRRRALLRDAFVPVPGKFDFAISLDHHENGDTSAIEAFLDEAVAGNCEGLMIKTLE-QNATYEPTKRSLNWLKLKKDYLSGGASGGGRGPADSLDLVVLGGNHGQGKRVGWYGAFLLACYDSETEEYQSVCKIGTGFSEEFLAAMKPQLDVLILPGGKPGYYNTSLDCDVWFEPKIVWEVRAADLSVSPAHKGALDKVEKGKGIALRFPRFIRNRADKAPEDATSAEQIAEAYRSQALVEATLTNGGGKGKGAQDEDDDW 992
            ++  A+AA + T+ +     +L  G+ +   +PY  L  V   +EA T RLE    +T  +  +  +  +     L   +YL   ++ P Y  +ELGIG+  ++ A+ +  G  S S+ +     +GDLG  A  +K SQ+TL    KP PLT   V +  +++A  +G  S  +K+ II KL+  C  +G E K+++R L+ KLR   AE TVL AL+ A V        + E+E+S+   +                 A + E + +++KQ YSE PNYD ++ ALL   +  +++ C+L PGVP+KPMLAK   +  +VL + +G  FT EYKYDGERAQVH L DGS  +FSRNSED + KYPDL+A LP  ++ GT +FV DAEAVAID D+GKL+PFQ LS RKRK+ KVED+KV+V L+AFD+L+LN  P+LQ+    RR LL++ F PV G+F FA S D      T  I+AFL+E+V   CEGLM+K LE + + Y+P++R++NWLKLKKDYL+        G  DSLDLVV+G  +G+GKR   YGAFLLACYD+++EEYQ++CKIGTGFS+E L A    L  L +   +          DVW EPK+VWEV  ADLS+SP +  A   VE+ +GI+LRFPRFIR R DKA +DAT  EQIAE Y+ QAL +    + G KGKGA  +D  W
Sbjct:  135 ASKNAEAALSKTKEV-----DLPGGWKAGDPVPYAALAKVFALIEATTKRLEKTALLTSFLLLVIRRRAQGDSQSLLQAVYLCINRLCPDYVGIELGIGESLLIKAISESTG-RSLSVVKADLKKEGDLGLVAMNSKNSQKTL---FKPKPLTLPTVFKSLKEIALSSGHSSQNKKVSIITKLMASC--QGQEAKYIIRSLEGKLRIGNAERTVLVALAHAAV--------LAEQEISNKRSSAEKL-------------ASRLEESASIIKQVYSELPNYDLVIPALLDVGVDKLIEVCKLTPGVPLKPMLAKPTKAIGEVLDKFEGKKFTCEYKYDGERAQVHKLEDGSIAVFSRNSEDMSKKYPDLMAQLPSCIKEGTNTFVFDAEAVAIDKDTGKLMPFQELSRRKRKDVKVEDIKVRVCLFAFDLLYLNGEPLLQKDFGARRGLLQEHFQPVDGEFQFAKSSD---CDTTDEIQAFLEESVKDGCEGLMVKMLEGELSHYQPSRRTVNWLKLKKDYLA--------GVGDSLDLVVVGAYYGKGKRTNVYGAFLLACYDADSEEYQTICKIGTGFSDEALQAHAETLKPLEMSTPRGDVKVGGAKPDVWLEPKVVWEVLTADLSLSPIYTAAQGLVEE-RGISLRFPRFIRIREDKAADDATGPEQIAEMYQRQALAQG---SKGKKGKGADADDGFW 790          
BLAST of NO14G01570 vs. NCBI_GenBank
Match: KNE55052.1 (DNA ligase I, ATP-dependent (dnl1) [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 537.7 bits (1384), Expect = 7.500e-149
Identity = 302/665 (45.41%), Postives = 400/665 (60.15%), Query Frame = 0
Query:  327 YQTLTNVLEAVEAVTGRLEITDIVRELFAKTIECCPTDLPVLLYLLCGKIGPAYEAVELGIGDKNIVDALVKGLGCSSASLNQKGEGADGDLGTAAQRAKGSQRTLNFGAKPNPLTSQQVLQGFRDVAACAGGKSMTQKIDIIRKLLMRCAKEGAEVKFLVRGLQTKLRCRLAEPTVLTALSQAFVQTPPVLNAVVEEEMSSLAEATALAHGVAVLCNPKAGRAEKWEAAEAVVKQAYSECPNYDRLVAALLSAPLPHVLQTCRLAPGVPVKPMLAKAQDSFQDVLRRMQGLHFTMEYKYDGERAQVHLLPDGSFKIFSRNSEDTTTKYPDLLAVLPQALRAGTTSFVIDAEAVAIDPDSGKLLPFQILSTRKRKNEKVEDVKVQVVLYAFDILFLNDRPVLQEPLLRRRALLRDAFVPVPGKFDFAISLDHHENGDTSAIEAFLDEAVAGNCEGLMIKTLEQNATYEPTKRSLNWLKLKKDYLSGGASGGGRGPADSLDLVVLGGNHGQGKRVGWYGAFLLACYDSETEEYQSVCKIGTGFSEEFLAAMKPQLDVLILPGGKPGYYNTSLDCDVWFEPKIVWEVRAADLSVSPAHKGALDKVEKGKGIALRFPRFIRNRADKAPEDATSAEQIAEAYRSQALVEATLTNGGGKGKGAQDEDDDW 992
            Y  L  + EAVE  T RLEI  I+ +   K I+    DL  ++YL   ++GP YE +ELGIG+  ++ A+ +  G +   + +   G  GDLGT AQ+++G Q T+    +P PL   +V +  +++A   G  S   K+D I+ LL+ C   G E KFLVR L+ KLR  LAE TVL AL+ AFV                                 K       +AAE  +K  YSE P+YD +V ALL  P+  +   C L PG+P+KPMLA    +  +VL R +G  FT E+KYDGERAQ+HLL +G   I+SRNSE+ + KYPD++  L +  + GT SFV+D EAVA D +   +LPFQ+LSTRKRK+     +KVQV ++ FD+L+LN   +L+  L  RR LL D F  +PG+F FA S++  E  D   I+AFLD++VAGNCEGLM+KTLE  ++YEP+KRS NWLK+KKDYL         G  DSLDLVV+GG  G+GKR G YG FLLA YD   EEYQS+CKIGTGFSEE L  +   L   I+   +  Y       DVWF+P  VWEV+AADLS+SP +K  +  V+  KGI+LRFPRFIR R DK PEDAT+ EQ+A+ Y+ Q + +A  T GG        EDD++
Sbjct:  195 YADLCEMFEAVEKTTKRLEIASILTKFLVKIIKHSADDLLAIIYLCINRLGPEYEGLELGIGESILMKAIAEATGRTLQKI-KADLGTVGDLGTVAQQSRGHQSTM---FQPKPLLVPRVFKTLKEIAKITGSASQKIKVDKIKTLLVSC--RGNEAKFLVRSLEGKLRIGLAERTVLVALAHAFVYR-----------------------------KKKHPPDSDLKAAEETIKSVYSELPSYDLIVPALLKYPVKSLPDHCHLTPGIPLKPMLAHPTKAISEVLDRFEGKPFTCEFKYDGERAQIHLLENGKTFIYSRNSENLSPKYPDVMGRLDKIGKEGTISFVLDCEAVAWDREQQCILPFQVLSTRKRKDVTEASIKVQVCIFVFDLLYLNGESLLRHTLKTRRGLLLDHFTEIPGEFQFAKSMESRELDD---IQAFLDDSVAGNCEGLMVKTLEDESSYEPSKRSRNWLKVKKDYL--------EGVGDSLDLVVIGGFTGKGKRTGVYGGFLLASYDPGNEEYQSICKIGTGFSEEMLTQLAESLKAHIIAAPRSYYNLGDAKADVWFDPVQVWEVKAADLSISPVYKSGVGLVDPNKGISLRFPRFIRIRDDKKPEDATTGEQVADMYQRQQINDAKQTKGG--------EDDEY 805          
BLAST of NO14G01570 vs. NCBI_GenBank
Match: OAX42948.1 (DNA ligase I [Rhizopogon vinicolor AM-OR11-026])

HSP 1 Score: 537.7 bits (1384), Expect = 7.500e-149
Identity = 324/686 (47.23%), Postives = 417/686 (60.79%), Query Frame = 0
Query:  325 LPYQTLTNVLEAVEAVTGRLEITDIVRELFAKTIECCPTD----LPVLLYLLCGKIGPAYEAVELGIGDKNIVDALVKGLGCSSASLNQKGEGADGDLGTAAQRAKGSQRTLNFGAKPNPLTSQQVLQGFRDVAACAGGKSMTQKIDIIRKLLMRCAKEGAEVKFLVRGLQTKLRCRLAEPTVLTALSQAFVQTPPVLNAVVEEEMSSLAEATALAHGVAVLCNPKAGR-------AEKWEAAEAVVKQAYSECPNYDRLVAALLSAPLPHVLQTCRLAPGVPVKPMLAKAQDSFQDVLRRMQGLHFTMEYKYDGERAQVHLLPDGSFKIFSRNSEDTTTKYPDLLAVLPQALRAGTTSFVIDAEAVAIDPDSGKLLPFQILSTRKRKNEKVEDVKVQVVLYAFDILFLNDRPVLQEPLLRRRALLRDAFVPVPGKFDFAISLDHHENGDTSAIEAFLDEAVAGNCEGLMIKTLEQNAT-YEPTKRSLNWLKLKKDYLSGGASGGGRGPADSLDLVVLGGNHGQGKRVGWYGAFLLACYDSETEEYQSVCKIGTGFSEEF----------LAAMKPQLDVLILPGG-KPGYYNTSLDCDVWFEPKIVWEVRAADLSVSPAHKGALDKVEKGKGIALRFPRFIRNRADKAPEDATSAEQIAEAYRSQALVEATLTNGGGKGKGAQDE 988
            +PY  LT     +EA T RLE T ++   F   I+   TD    L   +YL   ++ P Y  VELGIG+  ++ A+ +  G S A++    +  +GDLG  A  +K SQ+TL    KP PLT   V    R++A  +G  S  +K+ II KLL  C  +  E K++VR L+ KLR   AE TVL AL+ A                             AVL   +AG+       A + E    ++K  YSE P YD ++ ALL+  L  +   C+L PGVP+KPMLAK   +  +VL R +G  FT EYKYDGERAQVH L DGS  +FSRNSED   KYPDL+  LP+ ++  T SFV+DAEAVAID  SGKL+PFQ LS RKRK+ KVED++V+V L+AFD+++LN  P+LQ+ L  RR LLR+ F  VPG+FDFA S D      T  I+AFL+E+V   CEGLM+K LE +A+ YEP++RS+NWLKLKKDYL+        G  DSLDLVV+GG +G+GKR   YGAFLLAC+D++ EEYQ++CKIGTGFSEE           L   KP+ D  I PGG KP         DVWFEPK+VWEV AADLS+SP +  A   VE+ +GI+LRFPRFIR R DK+ +DAT  EQI+E Y  QAL +   + GG K KG  D+
Sbjct:  242 VPYAALTKTFSLIEATTKRLEKTSLLTSFFWLVIQRSKTDDYNSLLQSVYLCINRLSPDYVGVELGIGESLLIKAISESTGRSLATIKADLK-KEGDLGLVAMISKNSQKTL---FKPKPLTVPFVFSNLREIALSSGHSSQAKKVSIITKLLAAC--QDFEAKYIVRSLEGKLRIGNAERTVLVALAHA-----------------------------AVLAKEQAGKRWSKEKVASRLEEGANIMKAVYSELPTYDIVIPALLTHGLSDLHTYCKLTPGVPLKPMLAKPTKAIGEVLDRFEGRRFTCEYKYDGERAQVHRLEDGSVSVFSRNSEDMKAKYPDLVEQLPRCIKEKTKSFVLDAEAVAIDKTSGKLMPFQELSRRKRKDVKVEDIQVKVCLFAFDLIYLNGEPLLQKSLSERRELLREHFQIVPGEFDFAKSSD---GSTTDEIQAFLEESVKDGCEGLMVKMLESDASFYEPSRRSVNWLKLKKDYLA--------GVGDSLDLVVVGGYYGKGKRTNVYGAFLLACFDADAEEYQTICKIGTGFSEEMLQTHWDTLRPLEVTKPRGD--IKPGGAKP---------DVWFEPKVVWEVLAADLSLSPVYTAAQGLVEE-RGISLRFPRFIRVRDDKSADDATGPEQISEMYERQALAQ---SKGGKKSKGDGDD 866          
The following BLAST results are available for this feature:
BLAST of NO14G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OSD03402.14.000e-15046.58ATP-dependent DNA ligase [Trametes coccinea BRFM31... [more]
KNE56721.18.800e-15045.16DNA ligase I, ATP-dependent (dnl1) [Allomyces macr... [more]
CDS18369.11.200e-14943.93DNA ligase 1 [Echinococcus granulosus][more]
KFB45092.11.500e-14943.71AGAP009222-PA-like protein [Anopheles sinensis][more]
XP_014294490.11.500e-14944.66DNA ligase 1 [Halyomorpha halys][more]
PCH33668.12.600e-14945.71ATP-dependent DNA ligase [Wolfiporia cocos MD-104 ... [more]
CBN75600.13.400e-14942.40conserved unknown protein [Ectocarpus siliculosus][more]
OJT04678.14.400e-14944.67DNA ligase 1 [Trametes pubescens][more]
KNE55052.17.500e-14945.41DNA ligase I, ATP-dependent (dnl1) [Allomyces macr... [more]
OAX42948.17.500e-14947.23DNA ligase I [Rhizopogon vinicolor AM-OR11-026][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002354NSK002354Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01570.1NO14G01570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590117gene_5726Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100055g24gene5825Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01570.1NO14G01570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01570 ID=NO14G01570|Name=NO14G01570|organism=Nannochloropsis oceanica|type=gene|length=3638bp
AGCCCACCACAGAAAACGACTGCAAGAAAATGAGCAGCAGCGTGGCAGCT
TCCGCTTCGGCGAAGCAGGGTTCCATCATgtaagtaattgtgcatgggtg
tgtctgtagagacacgtcacattgtgctgtttgtatgtacgcttgcctta
tgctttgcatgctttggtgagaaaggcgacgcacgagcacgcctgcatgg
ctgcagcaatgccgaatgttccggccccttgttattggctctcgccatca
tatagggtgggtgtttatacctttgtgtgaggtggttaagcctttctcat
ggtgcatgcttcatctccgccgccttttggcgtacgatgccaaggatagc
gcgcagggctcaagcgctccgaattccttacacttcatctcctgtccctc
cctctgcctcatccattttccttttctccatgtcgatccatcttttgaga
tctgaactgagtgcccggactgacccaattcttttctcatacctcgctat
cccctcgttggtacatcaaacaaaatcagGAATTTTTTCAAGAAGGGCAG
CGGAGATAAAACAAACCCTTCTGTCTCTGCCAAGACAGAGACGAAAGACG
CCACCGCTAGCCCGAAAGACAAGAAGGAGAAGGCGAAAGCGGTCGAGTTG
GAGGTCCCTATGGTTTTTCCGACCTCCAACGCTGCGGATAAGGAGGAAGA
AGACTCGATCGTGGCCAAGCCCGTCTTTACGGCAGTGACAGGAGCGACCA
AAGCAAAGAGCGAGCGGCGGAGCAAGAGGGCTGAGGACAAAATTATTGCG
GCAGCGGCTGCGCCTATGTCTGTGCCTGTGCATGCGGCTGATGCGAGTAT
GACTGTGAAGTTTGCTGCTGGCACCGAGGCGATTATTGAGGAACCCAGTG
ACAGCACCGTTGGTAGCAGCAACACTAAATCCCGCAAGCGCCTTCGCCGG
GTGGTCAAGGACGACGACGACGAATCCGACGATGACGTTCTGTCTGCCAC
AAACCCCACGATCAAAGCGACCGCTGCACTAGTCGCTGAGAACACAAAGA
AATACAAGACCATTCGTGTGTTCGCGAAGGAGGAAGGAAGAAATATGGGG
GTATGCGACGGGGAAGAGGATGAGGGCAAGTCGGAGGAGATGGACGAAGA
GACCGAAGAGAAACAGGGGCAAGAGGAGGGCGACAAGGAGGAGGAGAAAA
AGGAGGAAAGGGAACAGGAGGAACAGGAGGAGAAGGAGGAGGAGAGGAAA
GAGGAAGATGAAGAGGAGGAGGGGGGGGAAGAGGAAGAAGGGAAAACGCC
CATAAGCACTGTGTCTTCGGTGCTGGTGGGCAGCCTGCCCATGCCTAAGA
TCAAGAAGCCGACGAAAAGCACCAACAAGGCGAAGGCGGCGGCGGCCACC
ACCCGGAGGATCATCGAAGAAATTCGAGAGCTCACACCCGGCTACCCGAG
CTTGCCCTATCAGACGCTAACAAATGTGCTGGAAGCGGTAGAGGCCGTGA
CGGGACGGCTGGAGATCACCGACATAGTACGGGAGCTGTTCGCGAAGACC
ATCGAGTGCTGCCCCACCGACTTACCCGTGCTCCTGTACCTGCTCTGTGG
TAAGATCGGGCCGGCATACGAGGCTGTGGAGCTCGGCATCGGGGATAAGA
ACATCGTGGACGCGCTGGTCAAGGGCCTGGGATGCTCTTCGGCCTCGCTG
AACCAGAAGGGGGAGGGGGCGGACGGAGACTTAGGCACAGCCGCGCAGAG
AGCCAAAGGTAGCCAGCGCACGCTGAACTTCGGTGCCAAGCCGAATCCAC
TGACTAGCCAGCAGGTACTACAGGGTTTTCGAGACGTGGCGGCATGCGCG
GGCGGCAAGTCCATGACGCAAAAGATCGACATCATCCGCAAGCTCCTCAT
GCGCTGCGCCAAGGAGGGGGCCGAGGTGAAGTTTCTGGTGCGCGGTCTCC
AGACCAAGCTCCGCTGCCGTCTGGCCGAGCCCACAGTGCTCACGGCACTC
TCGCAGGCCTTCGTGCAGACTCCTCCTGTGCTTAATGCTGTCGTGGAGGA
AGAGATGAGCTCCTTGGCAGAGGCGACAGCGCTGGCGCACGGAGTGGCTG
TGCTGTGCAATCCGAAGGCGGGCCGCGCTGAGAAGTGGGAGGCGGCCGAG
GCGGTGGTAAAGCAGGCATACAGTGAGTGTCCCAATTACGACCGGCTGGT
AGCTGCCCTGCTCTCGGCACCGCTACCCCATGTCTTGCAGACCTGCCGGC
TGGCGCCCGGCGTGCCCGTCAAGCCCATGCTAGCCAAGGCTCAGGACTCG
TTCCAGGATGTACTGCGGCGCATGCAGGGCTTGCATTTCACCATGGAATA
CAAGTACGACGGGGAGCGGGCACAGGTCCACCTCCTGCCTGACGGTTCAT
TTAAGATCTTCTCCCGCAACTCCGAGGATACCACCACGAAGTATCCAGAC
CTGCTGGCCGTGCTTCCTCAGGCTCTACGGGCCGGCACCACCTCCTTCGT
CATCGACGCTGAGGCCGTGGCCATCGACCCTGACTCAGGCAAGCTGCTAC
CCTTCCAGATCCTGAGCACACGCAAGCGTAAGAACGAGAAGGTTGAAGAT
GTGAAGGTGCAGGTCGTGCTCTACGCCTTCGACATCCTCTTTCTCAATGA
CCGGCCCGTACTCCAGGAGCCCCTCTTGCGGCGTCGCGCCCTCCTTCGCG
ATGCCTTTGTCCCCGTGCCCGGCAAATTCGACTTCGCCATCTCGCTGGAC
CATCACGAGAACGGGGATACATCGGCCATCGAGGCCTTCCTGGACGAGGC
CGTGGCCGGCAACTGCGAGGGGCTCATGATCAAGACGCTAGAGCAAAATG
CCACCTACGAGCCCACAAAGCGCTCCCTAAACTGGCTTAAGCTCAAAAAG
GACTACCTCTCTGGCGGGGCAAGTGGCGGTGGGCGGGGACCGGCTGATTC
TCTTGACCTGGTGGTACTGGGCGGCAACCACGGGCAAGGCAAGCGTGTGG
GCTGGTATGGGGCCTTCCTGCTGGCCTGCTACGATTCAGAGACGGAGGAG
TACCAGTCAGTCTGCAAGATCGGCACCGGCTTCTCGGAGGAGTTTCTGGC
CGCCATGAAACCCCAGCTGGACGTCCTCATCCTGCCCGGGGGCAAGCCCG
GCTACTACAACACCAGCCTGGACTGCGACGTTTGGTTCGAGCCCAAAATC
GTCTGGGAAGTGCGAGCCGCGGACTTGAGCGTATCGCCCGCGCACAAGGG
TGCGCTGGATAAGGTGGAAAAGGGCAAGGGGATCGCTCTCCGCTTTCCGC
GTTTCATCCGTAACAGGGCCGACAAGGCCCCAGAGGACGCGACCAGTGCG
GAGCAGATCGCGGAGGCCTACCGCAGCCAAGCCCTGGTGGAGGCCACTCT
GACCAACGGGGGAGGTAAGGGCAAAGGTGCACAGGACGAGGATGACGATT
GGTGTATCTAAGCAAAGCTGACTAGAGACTGTGCGGAGTGCAAACGACAC
GGCGGAAACAAGAAGTGGAGGCACTGGAAGTAAGAAGAGGACAAAGTGTG
GACATTAAAACGAATCGATATCGTGGATGACGGACGACAGGCATATTGCG
AATAATACCAAGCCTCTAACAAAGTAAACAGGAGAACG
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protein sequence of NO14G01570.1

>NO14G01570.1-protein ID=NO14G01570.1-protein|Name=NO14G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=994bp
MSSSVAASASAKQGSIMNFFKKGSGDKTNPSVSAKTETKDATASPKDKKE
KAKAVELEVPMVFPTSNAADKEEEDSIVAKPVFTAVTGATKAKSERRSKR
AEDKIIAAAAAPMSVPVHAADASMTVKFAAGTEAIIEEPSDSTVGSSNTK
SRKRLRRVVKDDDDESDDDVLSATNPTIKATAALVAENTKKYKTIRVFAK
EEGRNMGVCDGEEDEGKSEEMDEETEEKQGQEEGDKEEEKKEEREQEEQE
EKEEERKEEDEEEEGGEEEEGKTPISTVSSVLVGSLPMPKIKKPTKSTNK
AKAAAATTRRIIEEIRELTPGYPSLPYQTLTNVLEAVEAVTGRLEITDIV
RELFAKTIECCPTDLPVLLYLLCGKIGPAYEAVELGIGDKNIVDALVKGL
GCSSASLNQKGEGADGDLGTAAQRAKGSQRTLNFGAKPNPLTSQQVLQGF
RDVAACAGGKSMTQKIDIIRKLLMRCAKEGAEVKFLVRGLQTKLRCRLAE
PTVLTALSQAFVQTPPVLNAVVEEEMSSLAEATALAHGVAVLCNPKAGRA
EKWEAAEAVVKQAYSECPNYDRLVAALLSAPLPHVLQTCRLAPGVPVKPM
LAKAQDSFQDVLRRMQGLHFTMEYKYDGERAQVHLLPDGSFKIFSRNSED
TTTKYPDLLAVLPQALRAGTTSFVIDAEAVAIDPDSGKLLPFQILSTRKR
KNEKVEDVKVQVVLYAFDILFLNDRPVLQEPLLRRRALLRDAFVPVPGKF
DFAISLDHHENGDTSAIEAFLDEAVAGNCEGLMIKTLEQNATYEPTKRSL
NWLKLKKDYLSGGASGGGRGPADSLDLVVLGGNHGQGKRVGWYGAFLLAC
YDSETEEYQSVCKIGTGFSEEFLAAMKPQLDVLILPGGKPGYYNTSLDCD
VWFEPKIVWEVRAADLSVSPAHKGALDKVEKGKGIALRFPRFIRNRADKA
PEDATSAEQIAEAYRSQALVEATLTNGGGKGKGAQDEDDDWCI*
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