NO14G00150, NO14G00150 (gene) Nannochloropsis oceanica

Overview
NameNO14G00150
Unique NameNO14G00150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5303
Alignment locationchr14:51218..56520 +

Link to JBrowse

Properties
Property NameValue
DescriptionWD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:51218..56520 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005398Tubby_N
IPR036285PRP4-like_sf
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR027106Prp4
IPR014906PRP4-like
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
BLAST of NO14G00150 vs. NCBI_GenBank
Match: PRW05847.1 (U4 U6 small nuclear ribonucleo PRP4 [Chlorella sorokiniana])

HSP 1 Score: 161.4 bits (407), Expect = 7.600e-36
Identity = 142/404 (35.15%), Postives = 196/404 (48.51%), Query Frame = 0
Query:   25 AIKGNDASATGSAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGI--NQ-SQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGTTSWDYTWR 426
            AIK  D     +A + A + AGNI   +    +V+EL + S E   +Q  L+R++E  ++ ++ VVPT   DV   LR+ G+P+ LFGE   +RR+RLR+ LA +  +  +                                                                  XXXXXXXXXXXX    FYT G P L +AR+ +A FSL+ A  RLA          A++A  +P    +E+ VG   +  R+L I  NQ S++GD+RP+A    SP    LATGAW+ TLKVW +   SL + +  + H ERV G+AW P      EA T      +++ LAS + D TA+LWS       +GK+LR   GH  RL   AFHP GR+LGT S+D TWR
Sbjct:   21 AIKRGDT----AAGLAAGIAAGNI-FRQTADAEVLELPEASAEQARKQQELMREIELRRKMKATVVPTNDGDVRRMLRQLGEPITLFGEREMERRDRLRKLLAHMGEEAAV--------------------------------------------------------AALGPPTDAEXXXXXXXXXXXXXXXXFYTEGPPALADARQEIAQFSLRRAALRLA---------AAQRARENP----DEDEVGEVAAAERQLRIMTNQASEIGDERPIAGCCFSPDGSQLATGAWSGTLKVWAMP--SLQKQLTIKAHAERVTGVAWHP------EASTTG-RMEAAVTLASGATDATAKLWS------GDGKLLRTLTGHTDRLGRIAFHPMGRHLGTASFDQTWR 335          
BLAST of NO14G00150 vs. NCBI_GenBank
Match: XP_024577603.1 (u4 u6 small nuclear ribonucleoprotein [Plasmopara halstedii] >CEG41234.1 u4 u6 small nuclear ribonucleoprotein [Plasmopara halstedii])

HSP 1 Score: 154.5 bits (389), Expect = 9.300e-34
Identity = 118/412 (28.64%), Postives = 182/412 (44.17%), Query Frame = 0
Query:    8 KHIHFGSLEEKEKARLEAIKGNDASATGSAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPE-LVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGTT 419
            K I+FG+++               +   S+ +++A+RAGN+N+++  +T+V++L+++SR AQ++ A LLR++EAEKR R++ VPT   +VI  LR+ G+P+ LFGE  ADRRERLRE L+ +E++                                                                                   +LFY     E L  AR  + A + +   ARL + +  + +               ++     Y+   ++    SQ GD+RPL++V  S     +ATG+W+  +K+W  +     E+   RGH +R+ GLAW P         T   D    + L S S DGTARLWS         + L V +GH ARL   AFHP G Y+GTT
Sbjct:    5 KGIYFGTIDPSNDDVQPGSCIGKENGNISSNLESAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIIEEVIRRLRQLGEPITLFGERPADRRERLREILSHLELEA---------------------------------------EETGFVHQVLADIQKQEAGVGTEVLEAPGTENIARKSTKRQDDQLFYVPIKNEKLKHARATIFAHTAKTVSARLIQERQAKFINV-------------DQHAAMLYATALKMANVASQNGDERPLSSVRYSVDGAHVATGSWSSLVKIWSAENAC--EVKVFRGHEDRITGLAWHPT-----NIFTEMTDRADVVCLCSGSADGTARLWSAA-----RNEPLAVLKGHKARLGKVAFHPLGNYIGTT 352          
BLAST of NO14G00150 vs. NCBI_GenBank
Match: CBN79037.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 151.4 bits (381), Expect = 7.900e-33
Identity = 116/310 (37.42%), Postives = 156/310 (50.32%), Query Frame = 0
Query:   38 AIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMP 348
            AI+AAV+AGNINI +   T++M+L++ S+EAQ   A LL+++EA++R R++VVPTK  DV   LR+ GQPV LF E VAD RERLR ++AA E++                                                                     XXXXXXXXXXX K E+ YT     L+EAR  +A  S   A +RLA  K RR               A + R    +S M+ L IN SQ  DDRPL+A+ VSP  G +A+G+WT  +K+WD++  +L+     RGH ERV G+ W P
Sbjct:   54 AIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEADRRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEME--------------------------------------DEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGXXXXXXXXXXXKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRR--------GTPEETSAVDRRAVETFSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIE--NLEMRKVLRGHSERVTGVTWHP 315          
BLAST of NO14G00150 vs. NCBI_GenBank
Match: GAX92106.1 (Hypothetical protein PINS_000019 [Pythium insidiosum])

HSP 1 Score: 144.8 bits (364), Expect = 7.400e-31
Identity = 124/401 (30.92%), Postives = 179/401 (44.64%), Query Frame = 0
Query:   25 AIKGNDASATGSAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPE-LVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPS--GRYLGT-TSWD 422
            +++ + A+ +G+A ++AA+RAGN++ +EA + +V++L++TS  AQ++ A LLR++EAEKR RS+ VPT   +VI  LR+  QP+ LFGE  ADRRERLRE LA +E++                                                                                 + +LFY       L  AR  + AF+ +    RL R +       A  A     A+  ++R    Y    ++    SQ  D RP+A V  S  A  +ATG+W+  +K+W+    S  E+   RGH +RV GLAW P        + M   S   + L + + D TARLWS   GQ  E       +GH ARL   AFHPS  G  LG    WD
Sbjct:   32 SVRLSAAATSGNATLEAAMRAGNLSSSEAAEKEVLQLSETSLAAQEKHAQLLRRIEAEKRARSITVPTSVEEVILRLRQLQQPITLFGEGPADRRERLRELLANIELEA----------------------------------------EEGGVVDQLLGHLRQQDNELKGAAPSTAAGAAIQGKTQAVEDQLFYIPNQHNGLKAARTDIFAFAAERTAERLQRER-------AEHAWGPNEAIQCDQRAAALYLTAEKMVNVASQNADVRPVACVRYSRDAKVIATGSWSGLVKIWNT--DSATEVATLRGHEDRVTGLAWHPTAPAAFGDDAM---SDDVVCLCTGAADNTARLWSP-TGQRAE------LKGHRARLGKVAFHPSATGDLLGIGRVWD 373          
BLAST of NO14G00150 vs. NCBI_GenBank
Match: XP_012198389.1 (hypothetical protein SPRG_04586 [Saprolegnia parasitica CBS 223.65] >KDO30685.1 hypothetical protein SPRG_04586 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 138.7 bits (348), Expect = 5.300e-29
Identity = 107/367 (29.16%), Postives = 158/367 (43.05%), Query Frame = 0
Query:   15 LEEKEKARLEAIKGNDASATGSAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYT-AGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLW 381
            + E+      A+  +     GS+++QA +RAGNIN   +G+ +V+EL++TSR AQ++ A  LR+LE E+R R + VPT+  +VI  LR  G+P+ LFGE   DRR RLR+ L A+++ G                                                                                + +LFY      +L  AR  M   S+ +  ARL +           +A  +      ++   + Y   +   +N SQL D RPL+ V  SP A  LATG+W+  +K+WD K  S D +    GH +R+ GLAW       H A T E     S  LAS + DGTA++W
Sbjct:    1 MAERSTIHFGALSASSIVGAGSSSVQAGIRAGNINTGNSGEKEVLELSETSRLAQEKHAEQLRRLETERRARLIQVPTRTEEVIQQLRSLGEPITLFGEKPEDRRARLRDLLGALQLAG--------------------------------------------------DVDTIVAAQAKANAAASQQVGYEKEKKVAIEDQLFYVPLKTNDLKVARHAMFKHSMVSTSARLQQ----------ERAQMEGTVFDADKHAAQLYREAQETSLNASQLADVRPLSHVKYSPDASLLATGSWSSNVKIWDSK--SCDLVHTLTGHTDRITGLAW-------HPASTTE-----SPILASGAADGTAKIW 293          
BLAST of NO14G00150 vs. NCBI_GenBank
Match: XP_008607928.1 (hypothetical protein SDRG_04053 [Saprolegnia diclina VS20] >EQC38336.1 hypothetical protein SDRG_04053 [Saprolegnia diclina VS20])

HSP 1 Score: 136.7 bits (343), Expect = 2.000e-28
Identity = 106/367 (28.88%), Postives = 158/367 (43.05%), Query Frame = 0
Query:   15 LEEKEKARLEAIKGNDASATGSAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYT-AGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLW 381
            + E+      A+  +     GS+++QA +RAGNIN   +G+ +V+EL++TSR AQ++ A  LR+LE E+R R + VPT+  +VI  LR  G+P+ LFGE   DRR RLR+ L A+++ G                                                                                + +LFY      +L  AR  M   S+ +  ARL +           +A  +      ++   + Y   +   +N SQL D RPL+ V  SP A  LATG+W+  +K+W+ K  S D +    GH +R+ GLAW       H A T E     S  LAS + DGTA++W
Sbjct:    1 MAERSTIHFGALSASSIVGAGSSSVQAGIRAGNINTGNSGEKEVLELSETSRLAQEKHAEQLRRLETERRARLIQVPTRTEEVIQQLRSLGEPITLFGEKPEDRRARLRDLLGALQLAG--------------------------------------------------DVDMIVAAQAKANAAASELVGYEKEKKVAVEDQLFYVPLKTNDLKVARHAMFKHSMVSTSARLQQ----------ERAQMEGTVFDADKHAAQLYREAQETSLNASQLADVRPLSHVKFSPDASLLATGSWSSNVKIWNSK--SCDLVHTLTGHTDRITGLAW-------HPASTTE-----SPILASGAADGTAKIW 293          
BLAST of NO14G00150 vs. NCBI_GenBank
Match: XP_024385031.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Physcomitrella patens] >XP_024385032.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Physcomitrella patens] >PNR48111.1 hypothetical protein PHYPA_012584 [Physcomitrella patens])

HSP 1 Score: 132.1 bits (331), Expect = 5.000e-27
Identity = 106/367 (28.88%), Postives = 154/367 (41.96%), Query Frame = 0
Query:   60 ELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRG-HMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGTTSWDYTWR 426
            ++++ S+ A++R+  L+++L   +R  +L VPT  + V   LR  G P+ LFGE   +RR+RLR  +A ++ DG L                                                                                +LFYT G  EL+EAR+ +  +SL+ +  R+ R K +R          DP      E +      M    ++ S++GD RPL++   SP A  LAT +WT   K+W +    +  L   +G H ERV  +   P      +A    V        A+ S D TA LWS+      EGK L+ +EGH  RLA  AFHPSG YLGT S+D TWR
Sbjct:   58 QVSEESQRARERKEQLVQQLLMRRRATALAVPTNDSAVRQRLRHLGHPITLFGEREMERRDRLRAVMAKLDADGELDKLVQAHEASADAHADEAHHETVQDDVPPL--------------------------------------------------QLFYTEGSAELLEARKQILRYSLRRSWTRIERAKRKR---------NDPXXXXXAE-IDEVLKSMEETSLDCSEIGDGRPLSSCSFSPDASLLATSSWTGVAKLWSMP--DVQHLATFKGYHTERVTDVVIHPGACKSQDAGAGNV--------ATASADRTAILWSL------EGKKLQSYEGHLDRLARIAFHPSGLYLGTASFDKTWR 348          
BLAST of NO14G00150 vs. NCBI_GenBank
Match: CEM08608.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 131.3 bits (329), Expect = 8.500e-27
Identity = 142/435 (32.64%), Postives = 204/435 (46.90%), Query Frame = 0
Query:    1 MGDQGQPKHIHFGSLE-EKEKARLEAIKGNDASA-TGSAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKV---LRVFEGHAARLASCAFHPSGRYLGTTSWDYTWR-WVCH 430
            M D G   HI++G+++ E  + R +A K  D     G   +                   MEL++ ++E+  +    ++    ++R +++  PT+  DV   LR+ G+P+ LFGE   +RR+RL+E LA +E +                                            XXXXXXXXXXXXXXXXXXXXXXXXX            +  +FYT G   L +AR  +A +S+ AA +RL R    RLL    ++  DP  L  EE +    + ++   ++ SQ+GDDRPL     +P   +LAT +W   +K+W L   S D     R H +R+ G+AW P   GG E       +P+++ +AS   D    LW V     E G V       EGH  R+   AFHPSG Y+G+TS D TWR W  H
Sbjct:    1 MADSGDKSHIYYGAIQLEGLQDRGKADKDQDIDKDEGEDILXXXXXXXXXXXXXXXXXHEMELSEAAQESIAKHQRTMQAFSQQQRAKAIAAPTQDMDVRKMLRQLGEPITLFGEGPGERRQRLKELLAKMEEE---------------------------DPDALTALLGQHLAPPXXXXXXXXXXXXXXXXXXXXXXXXXXAREPVVPTSIEEQTSVFYTEGSDALKQARIKIAQYSVPAAASRLRR---ERLL----RSKLDP--LEYEESLRDYQTHLQSFSVSVSQVGDDRPLTGGSFAPNDEYLATCSWAGLVKLWRLP--SCDAAWTFRCHTDRLHGVAWHPAYKGGTEGGR----APANIHIASGGADMKVMLWRVPEDGHEPGTVAEPAHTLEGHEDRINRVAFHPSGLYVGSTSHDLTWRLWDIH 393          
BLAST of NO14G00150 vs. NCBI_GenBank
Match: XP_015371905.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Diuraphis noxia])

HSP 1 Score: 128.6 bits (322), Expect = 5.500e-26
Identity = 117/422 (27.73%), Postives = 178/422 (42.18%), Query Frame = 0
Query:    8 KHIHFGSLEEKEKARLEAIKGNDASATGSAAIQAAVRAGNINIAEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMR---RLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAA-RLASCAFHPSGRYLGTTSWDYTWR 426
            K IH+GSLE++E+ RL ++   +  A      +  V  GNIN++     +  +L D    ++D+QA LL + E +K+ R + V T   +V   LRK GQP+ L+GE  A+RR RLRE L+ V  D                                                                                 +   +Y  G P L++AR  MA +SL  +  RL +L+             + A++ E     R   L +    L I  SQ+GD RP++    SP + F+AT +W+   K+W +   SL +    RGH   VC + + P  G           + +   L SC+ DG+ +LWS+   +EE    +   EGHA  R++   FHPSGR+LGT  +D +WR
Sbjct:   14 KTIHYGSLEDQERVRLSSLAFTEGDA------EPKVVGGNINVS----NEYFDLEDAI--SKDKQA-LLEEFERKKKARHVQVSTDDDEVKKNLRKLGQPICLYGEGPAERRNRLRELLSRVGED---------------------------------------------------------------VVAKKPEEEREKRQQIKDQDTTWYHEGPPSLLDARLYMAEYSLLRSHIRLEKLR-------------EEASIPESTLTARLQDLHKYTTSLSIYCSQIGDTRPISYCRFSPDSRFIATSSWSGLCKLWSVPDCSLVQTF--RGHNCNVCSITFNPHAG----------TAENICDLVSCASDGSVKLWSMDSKKEEP---VADLEGHAPFRVSRADFHPSGRFLGTCCFDNSWR 331          
BLAST of NO14G00150 vs. NCBI_GenBank
Match: XP_005650026.1 (WD40 repeat-like protein [Coccomyxa subellipsoidea C-169] >EIE25482.1 WD40 repeat-like protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 127.9 bits (320), Expect = 9.400e-26
Identity = 108/361 (29.92%), Postives = 151/361 (41.83%), Query Frame = 0
Query:   65 SREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDWLRKHGQPVALFGETVADRRERLREYLAAVEVDGYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKGRRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVGVSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQGGGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHAARLASCAFHPSGRYLGTTSWDYTWR 426
            SR AQ  Q   +R++E  +R R+ VVPT+  +V   LR   +PV LFGE   +RR+RLR+ LA ++ D  L                                                                              ++E FYT G P+L  AR  +A +SL+ A  R+   K +R          D   L+E +    A    + +    S++GDDRP+ A   SP    LAT A +  LK+W +      + +  + H +RV G+AW P  G   + E    D+P+   L +  VD TARLWS        GK LR   GHA RL   A HP G++LGT S+D TWR
Sbjct:    4 SRHAQILQEEAVRQMELRRRMRAAVVPTQDAEVRRTLRLLKEPVTLFGEREMERRDRLRKLLAEMDDDEKL--------------------------------------------------------------DKLGGAEPEDVDMVEIRKEKFYTEGPPQLKAARMHLAHWSLERAMDRINFSKRKR-------ESPDEDELSERK---AAVDAAKGVVNQSSEIGDDRPITACAFSPSGQQLATAALSGLLKLWTVP--DCQKQITIKAHADRVTGVAWHPHAGAPGQGE----DAPA---LVTGGVDTTARLWSA------SGKQLRTLAGHADRLGRVAVHPMGQHLGTASFDQTWR 277          
The following BLAST results are available for this feature:
BLAST of NO14G00150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PRW05847.17.600e-3635.15U4 U6 small nuclear ribonucleo PRP4 [Chlorella sor... [more]
XP_024577603.19.300e-3428.64u4 u6 small nuclear ribonucleoprotein [Plasmopara ... [more]
CBN79037.17.900e-3337.42conserved unknown protein [Ectocarpus siliculosus][more]
GAX92106.17.400e-3130.92Hypothetical protein PINS_000019 [Pythium insidios... [more]
XP_012198389.15.300e-2929.16hypothetical protein SPRG_04586 [Saprolegnia paras... [more]
XP_008607928.12.000e-2828.88hypothetical protein SDRG_04053 [Saprolegnia dicli... [more]
XP_024385031.15.000e-2728.88U4/U6 small nuclear ribonucleoprotein PRP4-like pr... [more]
CEM08608.18.500e-2732.64unnamed protein product [Vitrella brassicaformis C... [more]
XP_015371905.15.500e-2627.73PREDICTED: U4/U6 small nuclear ribonucleoprotein P... [more]
XP_005650026.19.400e-2629.92WD40 repeat-like protein [Coccomyxa subellipsoidea... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL137nonsL137Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006196NSK006196Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00150.1NO14G00150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO14G00150.2NO14G00150.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101037g1gene5700Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00150.1NO14G00150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO14G00150.2NO14G00150.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00150 ID=NO14G00150|Name=NO14G00150|organism=Nannochloropsis oceanica|type=gene|length=5303bp
ACAGGGTGTGCAGGAAGGCAAACGAGCGATTTCCTTGCTCGGTGCAGCGA
CACGATGGGCGACCAAGGACAACCAAAGCACATCCACTTTGGTTCCTTGG
AGGAAAAGGAGAAGGCCCGCCTTGAGgtacagtggtctatcctcccctct
tccctatccttcctcccccctcccccgccccccgtcccctcctcgcgcac
cctcccttgcctcaagcacaaacgccttgtagactcgtgtcgcaacgagc
agcatgatctctttcgtactgtagctatcgaatcccatcctcccccgtga
ccgttctcaccgctactacccacccaccttttccctctccctctttcccc
ccctccttccctccgttcctcccaacagGCCATCAAAGGCAACGATGCCT
CGGCCACGGGCAGCGCCGCCATCCAAGCGGCCGTACGAGCTGGCAACATT
AACATTGCCGAGGCGGGAAAGACACAGgtatgaggtgggggaagagggag
agcaataggatgtcctgaggaagaggatgggaagggcggcgtagcgattt
ctgaacgaagacgtaaggacaagcggatggacagatgcaaaagcgcggag
gatacctgtgttgatcttctactccctccttcatttctccttctccctcg
ccctcttctagGTGATGGAACTGACAGACACGAGCCGAGAAGCTCAAGAC
AGGCAAGCGCTGCTCCTCCGGAAGCTGGAGGCCGAGAAGAGAAAGCGAAG
CCTAGTAGTGCCCACCAAGCCGACCGACgtacgtacggagagaaggaggg
aaggagggaaggagggaaggaggaagggaacggcaacaagtcgtcgaagc
acgggtaatgcacatgtccctctatggtatggagatggttgtagccgaat
tggacttttaccggtcacccctggccccctccctcccttcctccctccct
ttttcccatcctctccctgctcccacctagGTCATCGACTGGCTCCGGAA
GCACGGGCAGCCGGTGGCGCTGTTTGGGGAGACTGTGGCCGACAGGCGCG
AACGTTTGCGGGAGTACCTGGCCGCGgtgaggagggagggagggaggggg
ggcgactatcgcagggatggtcagcctggaggttcagatgaccagacaac
cgggagtttcacaagccttctccttcctcctttcctccctccgtccctcc
ctccctccctccctccctgcagGTGGAAGTGGACGGCTATCTGGCGGCCG
CTGCCCCACCAGGAGCAGCAGCACCAGCAGCACCAACAACAGCACCAGCA
GCAGCAACCGCAGCAGCAGTAGGGAAAGCAGGAGGTGAAGGGCTGCTGGG
TGCTGCCCCGCCGTCCGCCCTGGCTATCGCCTCGGTTCCTCTCCCAAGCA
AGCAGCAGCAACAGCAGGAGGAGAGAATGGAGGAGCAGAAAGAGGGGGAG
GGGGAGGAGGAGGGAAGGGCAGAGAAGAAGCAGGAGgttcgtatgcccgt
ttctttaactgctcttttcctacccctgctcttttcctatttctgctctt
ttcctggccctgctgcaccagctgatcgacttgttgcttcactttttgaa
ccttgctcccctcttcacgctccttcttcccttcttccctacctcccttc
ctccctcctctcgacccacccgaccaaccctccttccttcttctctccct
ccctccctccctccctccctcccttccagCTCTTCTACACGGCGGGGTTG
CCCGAGCTGGTGGAGGCCAGGAGAGTAATGGCCGCCTTCTCCCTACAGgt
aggtagggagggaggcagggaggcagggatggggggggaaagaactcaac
cataggcgggaagttgttcacgtcttgctaaatgtcgtcgtccttattcc
cattccctccctccctccctccctccctccctccctccctccctcagGCT
GCCCCTGCTCGTCTGGCGCGCCTCAAGGGCCGGCGATTGCTTCTCACCGC
CCGAAAAGCAGACGCGGATCCAGCCGCCCTAGCCGAGGAGGAACGGGTGG
GAAGAGCgtacgtagggagggaggatatggaggaatgataggagggaggg
agggagggagggagggagggagggagggagagagggggaatgatgatgga
tggctgtcttttttcctgggcgcgtgtgcctcttagacacctgtctgtgc
ctactttatttctgacgtctctcggtttctttcttcttcttcttcttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct
tcttcttcttcttcttcttcttcttctttctgtcgtctttttgttccttg
acatctttcttgcttttctctccctttctctctctctctctctctctttc
tctctctctctctctctctctctctctctctctccaggccagagctcacc
atccccttccctccctcccccctccctccctccctccctccctccctccc
tcccccccagCTACTCGCTCATGCGCCGGCTGGGCATCAACCAGTCCCAG
CTCGGCGACGACCGGCCTCTGGCTGCTGTCGGGGTCTCGCCTTGTGCGGG
CTTTCTGGCCACAGgtacggagggagggccggagggacggagggacggag
agaaggtggttgaggccttaggtgggtgcacttcacatcatttcaatcgg
catttttccctccctacctccctccctccttcccagGTGCCTGGACTCAC
ACCCTCAAGGTGTGGGATCTAAAGGGCGGGAGTCTTGACGAGTTGGTGTG
CTGCCGCGGGCACATGGAGCGAGTGTGCGGCCTGGCCTGGATGCCGCTGC
AGgtagggagggtgggaaggagggagggaagagaaggagggagagaaggg
attgttggtttggtggttgacgatccagaatgtcatctcatcaatttggc
tccagattgaccacacttgattctttctctctctcacacacacacacact
catgtatgtatgtatgtgcatttagGGCGGTGGCCATGAGGCCGAGACGA
TGGAGGTCGACTCTCCGTCCTCCCTTAAGCTGGCCTCCTGCTCTGTAGAC
GGGACTGCGCGgtaggtctctggaggagatggtgaaggaggcagggaggg
aaaggaagaaacacacgtatgagccctcatctcgactcccgatggtatgc
acgcgcatttacgttctcttccctcctcaacttcttcctccttccctccc
tttccccctccctccttcctccttccctctctcctcgattccgcagGCTG
TGGTCCGTCTGCCCCGGACAGGAGGAGGAAGGGAAGGTCCTCCGGGTATT
TGAGGGTCACGCCGCTCGCCTTGCCTCATGTGCCTTCCATCCCTCCGGGC
GCTACTTGGGCACCACCAGCTGGGACTACACCTGGAGgtgggtttgtcac
ggcgctccttccctctcgccctcccccgatctctacctgactgcctgcta
ccccatctctcgtccgcctttagggtcgggcccgagggagggtgcagtgc
atcgtgtcgtaatcccctacatactcacggtgttcttctttttcttttat
cccccgtgtcctccctccctcccttccccccttgtccctctcccagGCTC
TGGGACGTGGAGACGGGCCAAGAACTGCTTCTGCAAGACGGGCACTATAA
GGAGACCCACGCCATCGCCTTCCAGgtagggagggagggaaggagggggg
agggggttcattgggctggttggacgatccagatagttggcatcggcacc
ccctgcttgcgacagatggacagaggtctgtcgtcatctcgtcattgatg
tccatattttctccttttcattcatgcattcgcttcatcctcgctccctc
cctcctcccctcattattcagGGGGACGGCGCCTTGGTCGTGACGGGCGA
CTACGCGGGCATCGGCCACGTCTGGGACATGCGAACGGGGAAGAGCATCT
TCCAGCTCCATgtaaggaggagtgagagtgggtcggagggaagaagagga
ggactgacggaagggaactgtggattggatgggtgctgactgaagctaca
accgtaccctcaccttcagacacaacatctttaatcacatgattaaaccc
atgttccaccaccataccaccaaacataatatagGGACACACCCAAAAGG
TCCTCTGCGCGGATTGGCATCCCAACGGgtaagtccatcttctctctctc
cgcatccctcgcttctctccatcctgcattttaccatttcatgcctctca
ccactcaccctcccaccccttctgattctaacagCTACCAATTTGCGACA
GGTTCTTCCGAGAACGTGGTCAAGATCTGGGACATGCGGAGACGAGCCAA
CATCTACACCATTCCCGCGCACAGTGCCCTGGTCGCCGCGGTCAAgtacg
tggaggggcgagaattgaatcaagggcgaggaggacacggggggaggctg
taatctttgtttttcctttctttaatgtatgactcgagctgtctaccttc
gtgtatgtctcttcaaatatggaagctgtgtgacgggtaacggcatgaga
aagcgagtcgtgagggtcactccgagcgcacgtgcgtccctggtttgttc
ccccccctcttagtcttgcgggtcgctgtcccgtgtccaagcagcagtct
tgcacaaaccctcctagaatcgccgtacacacatgcactcacactctccc
cctcccttttcaccgtgctgcctccccacagGTACGCGCCACAGGACGGA
GAGTTCCTGGCCACGGCTTCCTTCGACGGGAAAGCTAAGgtatgtggatg
gttatgcacacgtggactgtcaaagagatggttctggctggataaaactc
tttctttataaacgtctttctcctctaaagattgatatctatcagagatc
gagctgcgcttcgtttgtccttgaaaacctaagcgttggtgttgtcgcag
cctgtgggtctgtatccaacttagaggtgcatgcactaatgtaacacgtg
cgcgtcatcctctcacgtaccatcccacccacactcatacattctttccc
accctttcagGTCTGGGGCACGCGGGACTTTCGGCTGCTGAGAACGCTGG
AGGGGCATGAGGGGCGCGTCGTGGACATAGACTGGACTCCAGATGGCCGA
CGGCTGGTCACGGCGTCACATGACCGAACCTTTAAGGTGTGGGCGGACAG
CAAGGAGTTTTGAAGAAGCAACAAACAGTAAAAGCATAAACACGAAAACG
TTG
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protein sequence of NO14G00150.1

>NO14G00150.1-protein ID=NO14G00150.1-protein|Name=NO14G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=603bp
MGDQGQPKHIHFGSLEEKEKARLEAIKGNDASATGSAAIQAAVRAGNINI
AEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDW
LRKHGQPVALFGETVADRRERLREYLAAVEVDGYLAAAAPPGAAAPAAPT
TAPAAATAAAVGKAGGEGLLGAAPPSALAIASVPLPSKQQQQQEERMEEQ
KEGEGEEEGRAEKKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKG
RRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVG
VSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQG
GGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHA
ARLASCAFHPSGRYLGTTSWDYTWRLWDVETGQELLLQDGHYKETHAIAF
QGDGALVVTGDYAGIGHVWDMRTGKSIFQLHGHTQKVLCADWHPNGYQFA
TGSSENVVKIWDMRRRANIYTIPAHSALVAAVKYAPQDGEFLATASFDGK
AKVWGTRDFRLLRTLEGHEGRVVDIDWTPDGRRLVTASHDRTFKVWADSK
EF*
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protein sequence of NO14G00150.2

>NO14G00150.2-protein ID=NO14G00150.2-protein|Name=NO14G00150.2|organism=Nannochloropsis oceanica|type=polypeptide|length=522bp
MGDQGQPKHIHFGSLEEKEKARLEAIKGNDASATGSAAIQAAVRAGNINI
AEAGKTQVMELTDTSREAQDRQALLLRKLEAEKRKRSLVVPTKPTDVIDW
LRKHGQPVALFGETVADRRERLREYLAAVEVDGYLAAAAPPGAAAPAAPT
TAPAAATAAAVGKAGGEGLLGAAPPSALAIASVPLPSKQQQQQEERMEEQ
KEGEGEEEGRAEKKQELFYTAGLPELVEARRVMAAFSLQAAPARLARLKG
RRLLLTARKADADPAALAEEERVGRAYSLMRRLGINQSQLGDDRPLAAVG
VSPCAGFLATGAWTHTLKVWDLKGGSLDELVCCRGHMERVCGLAWMPLQG
GGHEAETMEVDSPSSLKLASCSVDGTARLWSVCPGQEEEGKVLRVFEGHA
ARLASCAFHPSGRYLGTTSWDYTWRWVCHGAPSLSPSPDLYLTACYPISR
PPLGSGPREGAVHRVVIPYILTVFFFFFYPPCPPSLPSPLVPLPGSGTWR
RAKNCFCKTGTIRRPTPSPSR*
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