NO13G03280, NO13G03280 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO13G03280
Unique Name	NO13G03280
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3924
Alignment location	chr13:961542..965465 -

Link to JBrowse

Properties


Property Name	Value
Description	Ubiquitin-conjugating enzyme type E2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr13	genome	chr13:961542..965465 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2

Vocabulary: **Molecular Function**
Term	Definition
GO:0016740	transferase activity
GO:0000166	nucleotide binding

Homology

[Close]

BLAST of NO13G03280 vs. NCBI_GenBank
Match: CBJ32978.1 (ubiquitin-conjugating enzyme type E2 [Ectocarpus siliculosus])

HSP 1 Score: 227.6 bits (579), Expect = 8.100e-56
Identity = 99/138 (71.74%), Postives = 119/138 (86.23%), Query Frame = 0

Query:  161 SKRRDMDLMKLMMSDFQVHIPDESRLHEFWVVLHGPAETPYHGGQWKVHVALPPDYPFKSPSIGFTNRLFHPNVDEMSGSVCLDVINQAWTPMYDLVNVFEAFLPQLLRYPNPSDPLNPDAAHLLLRDPEKYHDRVQD 299
            SKRRD D+MKLMMSDF+VHIPDES +H+F V   GP +TPY GG WKVHV LP +YPFKSPSIGF NR+FHPNVDEMSGSVCLDVINQ W+PM+DLVN+F+ F+PQLL YPNP+DPLN +AA LL+RDP+ Y +R+++
Sbjct:    7 SKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRE 144

[Close]

BLAST of NO13G03280 vs. NCBI_GenBank
Match: GAX82401.1 (hypothetical protein CEUSTIGMA_g9829.t1 [Chlamydomonas eustigma])

HSP 1 Score: 219.2 bits (557), Expect = 2.900e-53
Identity = 97/139 (69.78%), Postives = 116/139 (83.45%), Query Frame = 0

Query:  161 SKRRDMDLMKLMMSDFQVHIPDESRLHEFWVVLHGPAETPYHGGQWKVHVALPPDYPFKSPSIGFTNRLFHPNVDEMSGSVCLDVINQAWTPMYDLVNVFEAFLPQLLRYPNPSDPLNPDAAHLLLRDPEKYHDRVQDY 300
            SKRRDMD+MKLMMSD++V + DE+   +F V+ HGP ++PY GG WKVHV LP  YP+KSPSIGF NR+FHPNVDE +GSVCLDVINQ W+PM+DLVNVFE FLPQLL YPNPSDPLN +AA LL+R+P+ Y  RV+DY
Sbjct:    5 SKRRDMDVMKLMMSDWKVELTDENNTSDFCVIFHGPKDSPYEGGVWKVHVELPEAYPYKSPSIGFVNRIFHPNVDENAGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAASLLMREPQSYAQRVRDY 143

[Close]

BLAST of NO13G03280 vs. NCBI_GenBank
Match: XP_008901421.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI52723.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK92599.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL46006.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL99164.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM52313.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN13383.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO81445.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP22562.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP50526.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 216.9 bits (551), Expect = 1.400e-52
Identity = 92/139 (66.19%), Postives = 117/139 (84.17%), Query Frame = 0

Query:  161 SKRRDMDLMKLMMSDFQVHIPDESRLHEFWVVLHGPAETPYHGGQWKVHVALPPDYPFKSPSIGFTNRLFHPNVDEMSGSVCLDVINQAWTPMYDLVNVFEAFLPQLLRYPNPSDPLNPDAAHLLLRDPEKYHDRVQDY 300
            +KRR+ D+MKLMMSD++VH+ DE+R  +  V  HGP +TPY GG WK+HV LP DYPFKSPSIGF NR++HPNVDE SGSVCLDVINQ W+PM++LVN+F+ F+PQLLRYPNPSDPLN +AA LL++D E Y+ +V++Y
Sbjct:    5 NKRRETDVMKLMMSDYEVHLTDETRTSDLDVKFHGPKDTPYEGGSWKIHVTLPKDYPFKSPSIGFVNRIYHPNVDETSGSVCLDVINQTWSPMFELVNIFDMFIPQLLRYPNPSDPLNGEAASLLMKDAESYNRKVKEY 143

[Close]

BLAST of NO13G03280 vs. NCBI_GenBank
Match: XP_002909127.1 (ubiquitin-conjugating enzyme E2, putative [Phytophthora infestans T30-4] >EEY57941.1 ubiquitin-conjugating enzyme E2, putative [Phytophthora infestans T30-4])

HSP 1 Score: 216.9 bits (551), Expect = 1.400e-52
Identity = 92/139 (66.19%), Postives = 117/139 (84.17%), Query Frame = 0

Query:  161 SKRRDMDLMKLMMSDFQVHIPDESRLHEFWVVLHGPAETPYHGGQWKVHVALPPDYPFKSPSIGFTNRLFHPNVDEMSGSVCLDVINQAWTPMYDLVNVFEAFLPQLLRYPNPSDPLNPDAAHLLLRDPEKYHDRVQDY 300
            +KRR+ D+MKLMMSD++VH+ DES+  +  V  HGP +TPY GG WK+HV LP DYPFKSPSIGF NR++HPNVDE SGSVCLDVINQ W+PM++LVN+F+ F+PQLLRYPNPSDPLN +AA LL++D E Y+ +V++Y
Sbjct:    5 NKRRETDVMKLMMSDYEVHLTDESKTSDLDVKFHGPKDTPYEGGSWKIHVTLPKDYPFKSPSIGFVNRIYHPNVDETSGSVCLDVINQTWSPMFELVNIFDMFIPQLLRYPNPSDPLNGEAASLLMKDAESYNRKVKEY 143

[Close]

BLAST of NO13G03280 vs. NCBI_GenBank
Match: GAY01931.1 (ubiquitin-conjugating enzyme E2, putative [Pythium insidiosum])

HSP 1 Score: 216.5 bits (550), Expect = 1.900e-52
Identity = 91/139 (65.47%), Postives = 120/139 (86.33%), Query Frame = 0

Query:  161 SKRRDMDLMKLMMSDFQVHIPDESRLHEFWVVLHGPAETPYHGGQWKVHVALPPDYPFKSPSIGFTNRLFHPNVDEMSGSVCLDVINQAWTPMYDLVNVFEAFLPQLLRYPNPSDPLNPDAAHLLLRDPEKYHDRVQDY 300
            +KRR+ D+MKLMMS++ VH+ DESR ++F V  HGP +TPY GG WK+HV+LP +YPFKSPSIGF NR++HPNVD+MSGSVCLDVINQ W+PM+DL+N+F+ F+PQLLRYPNP+DPLN +AA LL++D E Y+ +V++Y
Sbjct:    4 NKRREKDVMKLMMSNYDVHLTDESRANDFHVKFHGPKDTPYEGGLWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFDLLNIFDMFIPQLLRYPNPTDPLNGEAASLLMKDIEAYNAKVREY 142

[Close]

BLAST of NO13G03280 vs. NCBI_GenBank
Match: POM60482.1 (Ubiquitin-conjugating enzyme E2 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 215.7 bits (548), Expect = 3.200e-52
Identity = 91/139 (65.47%), Postives = 117/139 (84.17%), Query Frame = 0

Query:  161 SKRRDMDLMKLMMSDFQVHIPDESRLHEFWVVLHGPAETPYHGGQWKVHVALPPDYPFKSPSIGFTNRLFHPNVDEMSGSVCLDVINQAWTPMYDLVNVFEAFLPQLLRYPNPSDPLNPDAAHLLLRDPEKYHDRVQDY 300
            +KRR+ D+MKLMMSD++VH+ DE++  +  V  HGP +TPY GG WK+HV LP DYPFKSPSIGF NR++HPNVDE SGSVCLDVINQ W+PM++LVN+F+ F+PQLLRYPNPSDPLN +AA LL++D E Y+ +V++Y
Sbjct:    5 NKRRETDVMKLMMSDYEVHLTDETKTSDLDVKFHGPKDTPYEGGSWKIHVTLPKDYPFKSPSIGFVNRIYHPNVDETSGSVCLDVINQTWSPMFELVNIFDMFIPQLLRYPNPSDPLNGEAASLLMKDAESYNRKVKEY 143

[Close]

BLAST of NO13G03280 vs. NCBI_GenBank
Match: XP_009529493.1 (hypothetical protein PHYSODRAFT_354813 [Phytophthora sojae] >EGZ15744.1 hypothetical protein PHYSODRAFT_354813 [Phytophthora sojae])

HSP 1 Score: 215.3 bits (547), Expect = 4.200e-52
Identity = 91/139 (65.47%), Postives = 118/139 (84.89%), Query Frame = 0

Query:  161 SKRRDMDLMKLMMSDFQVHIPDESRLHEFWVVLHGPAETPYHGGQWKVHVALPPDYPFKSPSIGFTNRLFHPNVDEMSGSVCLDVINQAWTPMYDLVNVFEAFLPQLLRYPNPSDPLNPDAAHLLLRDPEKYHDRVQDY 300
            +KRR+ D+MKLMMSD++VH+ DE++ ++  V  HGP +TPY GG WK+HV LP DYPFKSPSIGF NR++HPNVDE SGSVCLDVINQ W+PM++LVN+F+ F+PQLLRYPNPSDPLN +AA LL++D E Y+ +V++Y
Sbjct:    5 NKRRETDVMKLMMSDYEVHLTDETKTNDLDVKFHGPEDTPYEGGCWKIHVTLPKDYPFKSPSIGFVNRIYHPNVDETSGSVCLDVINQTWSPMFELVNIFDLFIPQLLRYPNPSDPLNGEAASLLMKDAESYNRKVKEY 143

[Close]

BLAST of NO13G03280 vs. NCBI_GenBank
Match: OWZ21274.1 (Ubiquitin-conjugating enzyme E2 [Phytophthora megakarya])

HSP 1 Score: 215.3 bits (547), Expect = 4.200e-52
Identity = 91/139 (65.47%), Postives = 117/139 (84.17%), Query Frame = 0

Query:  161 SKRRDMDLMKLMMSDFQVHIPDESRLHEFWVVLHGPAETPYHGGQWKVHVALPPDYPFKSPSIGFTNRLFHPNVDEMSGSVCLDVINQAWTPMYDLVNVFEAFLPQLLRYPNPSDPLNPDAAHLLLRDPEKYHDRVQDY 300
            +KRR+ D+MKLMMSD++VH+ DE++  +  V  HGP +TPY GG WK+HV LP DYPFKSPSIGF NR++HPNVDE SGSVCLDVINQ W+PM++LVN+F+ F+PQLLRYPNPSDPLN +AA LL++D E Y+ +V++Y
Sbjct:    5 NKRRETDVMKLMMSDYEVHLTDETKTSDLDVKFHGPKDTPYEGGSWKIHVTLPKDYPFKSPSIGFMNRIYHPNVDETSGSVCLDVINQTWSPMFELVNIFDMFIPQLLRYPNPSDPLNGEAASLLMKDAESYNRKVKEY 143

[Close]

BLAST of NO13G03280 vs. NCBI_GenBank
Match: XP_005716365.1 (Ubiquitin-conjugating enzyme, E2 [Chondrus crispus] >CDF36546.1 Ubiquitin-conjugating enzyme, E2 [Chondrus crispus])

HSP 1 Score: 212.2 bits (539), Expect = 3.500e-51
Identity = 92/138 (66.67%), Postives = 113/138 (81.88%), Query Frame = 0

Query:  162 KRRDMDLMKLMMSDFQVHIPDESRLHEFWVVLHGPAETPYHGGQWKVHVALPPDYPFKSPSIGFTNRLFHPNVDEMSGSVCLDVINQAWTPMYDLVNVFEAFLPQLLRYPNPSDPLNPDAAHLLLRDPEKYHDRVQDY 300
            KRR+ DLMKLMM+D ++ + D  R+ EF+V  HGP +TPY GG WKVHV LP  YP+KSPSIGF NRL+HPNVDEMSGSVCLDVINQ W+PMYDL N+FE FLPQLL YPNP+DPLN +AA L +R+P++Y  +V++Y
Sbjct:    6 KRRETDLMKLMMADHEIQMADGDRVGEFYVKFHGPKQTPYEGGVWKVHVELPETYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQTWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPDRYKQKVREY 143

[Close]

BLAST of NO13G03280 vs. NCBI_GenBank
Match: XP_021894052.1 (ubiquitin-conjugating enzyme E2 5-like isoform X1 [Carica papaya])

HSP 1 Score: 211.8 bits (538), Expect = 4.600e-51
Identity = 95/139 (68.35%), Postives = 116/139 (83.45%), Query Frame = 0

Query:  161 SKRRDMDLMKLMMSDFQVHIPDESRLHEFWVVLHGPAETPYHGGQWKVHVALPPDYPFKSPSIGFTNRLFHPNVDEMSGSVCLDVINQAWTPMYDLVNVFEAFLPQLLRYPNPSDPLNPDAAHLLLRDPEKYHDRVQDY 300
            SKRR+MDLMKLMMSD++V I ++  + EF+V  HGP+E+PYHGG WK+ V LP  YP+KSPSIGF N+++HPNVDEMSGSVCLDVINQ W+PM+DLVNVFE FLPQLL YPNPSDPLN +AA +++RD   Y  RV+DY
Sbjct:    5 SKRREMDLMKLMMSDYKVEIINDG-MQEFYVHFHGPSESPYHGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAAMMMRDRAAYEQRVKDY 142

The following BLAST results are available for this feature:

BLAST of NO13G03280 vs. NCBI_GenBank

BLAST of NO13G03280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
CBJ32978.1	8.100e-56	71.74	ubiquitin-conjugating enzyme type E2 [Ectocarpus s...	[more]
GAX82401.1	2.900e-53	69.78	hypothetical protein CEUSTIGMA_g9829.t1 [Chlamydom...	[more]
XP_008901421.1	1.400e-52	66.19	hypothetical protein, variant 1 [Phytophthora para...	[more]
XP_002909127.1	1.400e-52	66.19	ubiquitin-conjugating enzyme E2, putative [Phytoph...	[more]
GAY01931.1	1.900e-52	65.47	ubiquitin-conjugating enzyme E2, putative [Pythium...	[more]
POM60482.1	3.200e-52	65.47	Ubiquitin-conjugating enzyme E2 [Phytophthora palm...	[more]
XP_009529493.1	4.200e-52	65.47	hypothetical protein PHYSODRAFT_354813 [Phytophtho...	[more]
OWZ21274.1	4.200e-52	65.47	Ubiquitin-conjugating enzyme E2 [Phytophthora mega...	[more]
XP_005716365.1	3.500e-51	66.67	Ubiquitin-conjugating enzyme, E2 [Chondrus crispus...	[more]
XP_021894052.1	4.600e-51	68.35	ubiquitin-conjugating enzyme E2 5-like isoform X1 ...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL130	nonsL130	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR048	ncniR048	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR096	ngnoR096	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK007647	NSK007647	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO13G03280.1	NO13G03280.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|248243	gene_8973	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO13G03280.1	NO13G03280.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO13G03280 ID=NO13G03280|Name=NO13G03280|organism=Nannochloropsis oceanica|type=gene|length=3924bp
ATGGGCGGCCGGCCTAGGATTTTGTTTCCCAGGGCAAGTCGACGTGTGGC
ACGCTCTGCTATTGATGCCTTCTGgtccatttcatccaatccctcacgca
ggcccgtcgtcgcggcctttaccactgaccggctcctcctactaggaacc
atgctgtgctatctctatccttgcattcctccattcagcgcttaaggcgt
ggcgtggctctgatttgatgttgcttcagggggagtcatcgctcgctgaa
gagagaggagatcaaggacaacaaccccttacctttcatccctccctaga
tattcaaataagatgggcaaacatccacgacgtgacagtgtcgactcgct
cggccggagtcaagtgggaaattcggcacattcattcctccccctccctc
cctccctccctatccagACACACCTCCGGACACGCGAGCCCCGAAAGCAA
GATTACCAGGGCAGCAGCATCTCAAGGCGTAAGGCACAGAGACGAAGAGG
GAGGAGACAAAGTACACACGCAAGGTAGGATAGAAGCAGGAAAACGCAGC
CTTCGACAGCCGAGCTCGAAAGGCGCGCCCACGGACAAAAAGGGAGATAG
TGAAGCCCACCAGTGCCCTGAGAGAAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGTAGCAGCAGTAGTAGTGGCAGTATAAGCAGTGTATTGACGGGCAAG
CACCGATCAGGAAgtaaagttcttgcctgcaggggctgagggctaaggaa
gttcaattgagaaggaaagacaagaagcaggcattgctctggttgccccc
gtctaccacccttccctccgcatcatcttcctcgtcaattcccctgggga
aagaaaggggtagacttatccagaaagcacgctttccgttgggtgagtca
atctttaattagaggcagAAAAGGAGAAGAAAGAGAAGGAGAAGAAAGAG
AAGAAGAAGGAGGAGAAGAAGAAGATGTCGTATTCGTCCTCGGCCCCGAC
CTCGTCCTCCATGGCCGCCCACTCTACCTCCAAGCGCCGGGATATGGACT
TGATGAAGCTgtgcgtagggagggagggagggagggaggaaggaaggggt
ggacattcttgttctcactctcgtcatgatatcgaatgcaagagattcac
cttcccctttctccgtctcacgcccatccctccctccctctcttaataat
catcgtcccgtccccccctccctccctcccgcctcctcccctcagGATGA
TGAGCGACTTCCAGGTCCACATACCCGACGAAAGCCGCCTCCATGAGTTT
TGGGTCGTCCTCCACGGCCCCGCCGAGAgtacgttccctctctccctcct
ttcctccctctttccctccctccctccctcccatgatttcctccgccgat
ccgtgttctgaggccatacgccgttgactgtagtcttactcaaccaacct
ccctccctccctccctccctccctccgtccctccctccctccctccttcc
ctctctcccccagCCCCTTACCACGGCGGCCAGTGGAAAGTGCACGTGGC
GCTCCCTCCCGACTATCCCTTCAAGTCTCCCTCTATCGGATTCACCAACC
GGCTCTTCCACCCCAATGTCGACGAAATgtaaggaagcccttcctccctc
cctccctccctccctccctccctccctccttcccttcgtatgtgttggtg
gtgatatgcttcacaggaggggagggatggagggagggaggggccgaggg
ggtaccgccactcctccacccccggcctcttccctctcttctttatgaca
gcagctcgccgctttgtgctcaccctccctccctccctccctccctccct
ccctccctccctccctccctagGTCGGGCTCGGTGTGCCTTGATGTCATC
AATCAGGCATGGACTCCCATGTACGgtaggtgccgagggagggagggagg
gagggagggagggagggagggagggagggagggagggagggagggaggga
gggagggagggagggagggagggagggagggagggagggagggagggagg
gaggggagggagggagggagggagggcatgcgagctatatgggtaggatg
agacacactggaggaaggaaattagaaaaatgccaggggctgatgctccc
tccctccctccctccctccctccctccctccctccctccagACCTGGTGA
ACGTCTTCGAGGCCTTTTTGCCGCAGCTCCTCCGCTATCCCAACCCCAGC
GACCCCCTGAATCCCGACGgtagggagggagggagggggggagggagagg
tgcaggaagggaggaggggagggagggaaaggaaggaaaaagggagaggt
gcaggaagggaggaggggagggagggaaaggaaggaaggaaggagggagg
gagggagggagggagggaggaagggaaaagtacacatgctgggtctgtgt
tataagatgtatccatctctcttgtttatttacctcacctgcttcctccc
tccctccctcccgcttccctccctccctccctctctcccccctccagCGG
CCCACCTCCTCCTCCGCGACCCTGAAAAGTATCACGACCGCGTTCAAGgt
gaggagggagggagggagggagggagggagggagggagggagggagggat
tctgtcacagcaaaagaatgctaaaatccctcaacaatttatctttccgc
ctccctccctccctccctccctttaagACTACgtgcgtcgcttcgcctcc
gttccttttctcctcgccgacgagggcgggggcagGGGGGGGGGAAGGCG
GGGGGGAGGGAGGGAGGGAGGGCGAGGACAGCCTCTTCTTCCTCCTCCCC
CTCCTCCTCCTCCTCCTCCTCATCCTCCTCCTCATCCTCAGCGGCAAGAG
GAGCCAGGCCCTTGTCGGCTCAGCCGAGGCACCGACATCCCTCTCTGTCG
TCGTCGGTGgtaaggagggagggagggagggagggagagaaggagggagg
gaagacccaatggcattgctttcatcgaatctctgccttgtctgtgttgc
tgttgattgatttcataatgcgtccttcgttccttccttccttccctccc
tccctccctccctccctccctccctccctccctccccagGCCACGACGGT
GTCTGTCGCTCTCTCTTCCTCTCTCACGCCCTCCACCGACTCCCACCTCT
TTTCCTCCTCTGCCGCCTCCTCTTCCTCCTCTTCCTCCCTCCGCACCTCC
CCTGCGTCCTCCCCACGCCCTCGTCCACGAGGCCACCCACGgtacgtcct
cctaactccctccctccctccctccttccctccctccctcccttcctctt
ccatttaaaacattttcaaattttcggtctcgctgagatatgcccgtgtc
ttgtcccactgccctccctccctccctccctcactcactcactccgtttc
ctcctccctccttccttcccttccttttaaacctcagctcatcatcacgc
cttcccctccctccctccttccctccctccctccctcagGTCAGTTTCCC
TGGGCATGGTCCCCTCGTCCTCCCTCAGCACACGACCCACCACCGTGCAG
GTGGAGGCCTCTCACGgtaagggaggagggagggaggggatgcatgcttg
atgtcgatggatgagagggaaggagggccgtggggcaacttttcttcttg
tcggccgttttcactccctccactcgccttccctccctccctccctccct
cccgccctagGCGATGTTGACGACGAGGACGTGAAGCGGGCCCCGTCTGT
CTCCCTCCCGTCGACCGAGGTAGCCGCCACGAGGGAGGAGGAGGAGGAGG
GAGAAGGGGAGGAGCAAGGAGGAGAGAGTGACATCGATTCGGATGTGAGC
GAATTGAGTGACATTGATATTTAA

protein sequence of NO13G03280.1

>NO13G03280.1-protein ID=NO13G03280.1-protein|Name=NO13G03280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=488bp
MGGRPRILFPRASRRVARSAIDAF*HTSGHASPESKITRAAASQGVRHRD
EEGGDKVHTQGRIEAGKRSLRQPSSKGAPTDKKGDSEAHQCPERSSSSSS
SSSSSSSSSGSISSVLTGKHRSGKKEKKEKEKKEKKKEEKKKMSYSSSAP
TSSSMAAHSTSKRRDMDLMKLMMSDFQVHIPDESRLHEFWVVLHGPAETP
YHGGQWKVHVALPPDYPFKSPSIGFTNRLFHPNVDEMSGSVCLDVINQAW
TPMYDLVNVFEAFLPQLLRYPNPSDPLNPDAAHLLLRDPEKYHDRVQDYG
GGKAGGREGGRARTASSSSSPSSSSSSSSSSSSSAARGARPLSAQPRHRH
PSLSSSVATTVSVALSSSLTPSTDSHLFSSSAASSSSSSSLRTSPASSPR
PRPRGHPRSVSLGMVPSSSLSTRPTTVQVEASHGDVDDEDVKRAPSVSLP
STEVAATREEEEEGEGEEQGGESDIDSDVSELSDIDI*

Synonyms

Publications