NO13G03050, NO13G03050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G03050 vs. NCBI_GenBank
Match: XP_024369391.1 (guanine nucleotide exchange factor SPIKE 1-like isoform X5 [Physcomitrella patens]) HSP 1 Score: 80.1 bits (196), Expect = 1.300e-10 Identity = 68/254 (26.77%), Postives = 113/254 (44.49%), Query Frame = 0 Query: 1617 LIKKSLAL---RIHHEGLS-----PVVLLDDDTMWALQDLVAALASESIERYASGLWVSVDLNKALAIFLRDLLLLLHPSQVALLVSSYYTTLRTCTRTEQMEAKFEFLSILLMHDSVPFNKPWLFDLPTDVAITQEGREEGVIEGPATHWLVKLTMDECIGALSHPEAIIRSRGISLLRQTLVSHAVNPDYREAALREGVAAMYLPLIGHLVQRLESVQKLSHTAADRRELLACLLYVLQNAPQRLLRCLWQH 1863 LI KS+AL RI+ E L P + L D+ ++ L L +E ER G+ +++ LN ++A F DLL ++ QV LV+ Y+ ++ E K FL I+ H D+ + GR+ ++L L M E H + +RS+ +L Q + H + Y+ + +A Y PL+ ++ + LS T ++RE+L C+L++L+ L WQH Sbjct: 887 LIVKSMALEQSRIYSESLPPGEELPPLQLIDEVFKSIVQLYDCLLTEVHERCKKGMLLAMKLNSSIAYFCYDLLSVIEHRQVFELVALYFNKFAGVCQSLVHECKLNFLRIVCDH---------------DLFVEMPGRDP-----TERNYLASLLMQELFVTWDHEDLTLRSKAARILVQLMCKHEYDARYQTLEDKMYIAQRYFPLVDLILDEMPVFYGLSTT--EKREVLVCVLHILRYLDDASLVKAWQH 1118
BLAST of NO13G03050 vs. NCBI_GenBank
Match: XP_024369381.1 (guanine nucleotide exchange factor SPIKE 1-like isoform X4 [Physcomitrella patens]) HSP 1 Score: 80.1 bits (196), Expect = 1.300e-10 Identity = 68/254 (26.77%), Postives = 113/254 (44.49%), Query Frame = 0 Query: 1617 LIKKSLAL---RIHHEGLS-----PVVLLDDDTMWALQDLVAALASESIERYASGLWVSVDLNKALAIFLRDLLLLLHPSQVALLVSSYYTTLRTCTRTEQMEAKFEFLSILLMHDSVPFNKPWLFDLPTDVAITQEGREEGVIEGPATHWLVKLTMDECIGALSHPEAIIRSRGISLLRQTLVSHAVNPDYREAALREGVAAMYLPLIGHLVQRLESVQKLSHTAADRRELLACLLYVLQNAPQRLLRCLWQH 1863 LI KS+AL RI+ E L P + L D+ ++ L L +E ER G+ +++ LN ++A F DLL ++ QV LV+ Y+ ++ E K FL I+ H D+ + GR+ ++L L M E H + +RS+ +L Q + H + Y+ + +A Y PL+ ++ + LS T ++RE+L C+L++L+ L WQH Sbjct: 888 LIVKSMALEQSRIYSESLPPGEELPPLQLIDEVFKSIVQLYDCLLTEVHERCKKGMLLAMKLNSSIAYFCYDLLSVIEHRQVFELVALYFNKFAGVCQSLVHECKLNFLRIVCDH---------------DLFVEMPGRDP-----TERNYLASLLMQELFVTWDHEDLTLRSKAARILVQLMCKHEYDARYQTLEDKMYIAQRYFPLVDLILDEMPVFYGLSTT--EKREVLVCVLHILRYLDDASLVKAWQH 1119
BLAST of NO13G03050 vs. NCBI_GenBank
Match: XP_024369363.1 (guanine nucleotide exchange factor SPIKE 1-like isoform X2 [Physcomitrella patens]) HSP 1 Score: 80.1 bits (196), Expect = 1.300e-10 Identity = 68/254 (26.77%), Postives = 113/254 (44.49%), Query Frame = 0 Query: 1617 LIKKSLAL---RIHHEGLS-----PVVLLDDDTMWALQDLVAALASESIERYASGLWVSVDLNKALAIFLRDLLLLLHPSQVALLVSSYYTTLRTCTRTEQMEAKFEFLSILLMHDSVPFNKPWLFDLPTDVAITQEGREEGVIEGPATHWLVKLTMDECIGALSHPEAIIRSRGISLLRQTLVSHAVNPDYREAALREGVAAMYLPLIGHLVQRLESVQKLSHTAADRRELLACLLYVLQNAPQRLLRCLWQH 1863 LI KS+AL RI+ E L P + L D+ ++ L L +E ER G+ +++ LN ++A F DLL ++ QV LV+ Y+ ++ E K FL I+ H D+ + GR+ ++L L M E H + +RS+ +L Q + H + Y+ + +A Y PL+ ++ + LS T ++RE+L C+L++L+ L WQH Sbjct: 892 LIVKSMALEQSRIYSESLPPGEELPPLQLIDEVFKSIVQLYDCLLTEVHERCKKGMLLAMKLNSSIAYFCYDLLSVIEHRQVFELVALYFNKFAGVCQSLVHECKLNFLRIVCDH---------------DLFVEMPGRDP-----TERNYLASLLMQELFVTWDHEDLTLRSKAARILVQLMCKHEYDARYQTLEDKMYIAQRYFPLVDLILDEMPVFYGLSTT--EKREVLVCVLHILRYLDDASLVKAWQH 1123
BLAST of NO13G03050 vs. NCBI_GenBank
Match: XP_024369403.1 (guanine nucleotide exchange factor SPIKE 1-like isoform X7 [Physcomitrella patens]) HSP 1 Score: 80.1 bits (196), Expect = 1.300e-10 Identity = 68/254 (26.77%), Postives = 113/254 (44.49%), Query Frame = 0 Query: 1617 LIKKSLAL---RIHHEGLS-----PVVLLDDDTMWALQDLVAALASESIERYASGLWVSVDLNKALAIFLRDLLLLLHPSQVALLVSSYYTTLRTCTRTEQMEAKFEFLSILLMHDSVPFNKPWLFDLPTDVAITQEGREEGVIEGPATHWLVKLTMDECIGALSHPEAIIRSRGISLLRQTLVSHAVNPDYREAALREGVAAMYLPLIGHLVQRLESVQKLSHTAADRRELLACLLYVLQNAPQRLLRCLWQH 1863 LI KS+AL RI+ E L P + L D+ ++ L L +E ER G+ +++ LN ++A F DLL ++ QV LV+ Y+ ++ E K FL I+ H D+ + GR+ ++L L M E H + +RS+ +L Q + H + Y+ + +A Y PL+ ++ + LS T ++RE+L C+L++L+ L WQH Sbjct: 612 LIVKSMALEQSRIYSESLPPGEELPPLQLIDEVFKSIVQLYDCLLTEVHERCKKGMLLAMKLNSSIAYFCYDLLSVIEHRQVFELVALYFNKFAGVCQSLVHECKLNFLRIVCDH---------------DLFVEMPGRDP-----TERNYLASLLMQELFVTWDHEDLTLRSKAARILVQLMCKHEYDARYQTLEDKMYIAQRYFPLVDLILDEMPVFYGLSTT--EKREVLVCVLHILRYLDDASLVKAWQH 843
BLAST of NO13G03050 vs. NCBI_GenBank
Match: XP_024369400.1 (guanine nucleotide exchange factor SPIKE 1-like isoform X6 [Physcomitrella patens]) HSP 1 Score: 80.1 bits (196), Expect = 1.300e-10 Identity = 68/254 (26.77%), Postives = 113/254 (44.49%), Query Frame = 0 Query: 1617 LIKKSLAL---RIHHEGLS-----PVVLLDDDTMWALQDLVAALASESIERYASGLWVSVDLNKALAIFLRDLLLLLHPSQVALLVSSYYTTLRTCTRTEQMEAKFEFLSILLMHDSVPFNKPWLFDLPTDVAITQEGREEGVIEGPATHWLVKLTMDECIGALSHPEAIIRSRGISLLRQTLVSHAVNPDYREAALREGVAAMYLPLIGHLVQRLESVQKLSHTAADRRELLACLLYVLQNAPQRLLRCLWQH 1863 LI KS+AL RI+ E L P + L D+ ++ L L +E ER G+ +++ LN ++A F DLL ++ QV LV+ Y+ ++ E K FL I+ H D+ + GR+ ++L L M E H + +RS+ +L Q + H + Y+ + +A Y PL+ ++ + LS T ++RE+L C+L++L+ L WQH Sbjct: 617 LIVKSMALEQSRIYSESLPPGEELPPLQLIDEVFKSIVQLYDCLLTEVHERCKKGMLLAMKLNSSIAYFCYDLLSVIEHRQVFELVALYFNKFAGVCQSLVHECKLNFLRIVCDH---------------DLFVEMPGRDP-----TERNYLASLLMQELFVTWDHEDLTLRSKAARILVQLMCKHEYDARYQTLEDKMYIAQRYFPLVDLILDEMPVFYGLSTT--EKREVLVCVLHILRYLDDASLVKAWQH 848
BLAST of NO13G03050 vs. NCBI_GenBank
Match: XP_024369302.1 (guanine nucleotide exchange factor SPIKE 1-like isoform X1 [Physcomitrella patens] >XP_024369311.1 guanine nucleotide exchange factor SPIKE 1-like isoform X1 [Physcomitrella patens] >XP_024369320.1 guanine nucleotide exchange factor SPIKE 1-like isoform X1 [Physcomitrella patens] >XP_024369328.1 guanine nucleotide exchange factor SPIKE 1-like isoform X1 [Physcomitrella patens] >XP_024369337.1 guanine nucleotide exchange factor SPIKE 1-like isoform X1 [Physcomitrella patens] >XP_024369344.1 guanine nucleotide exchange factor SPIKE 1-like isoform X1 [Physcomitrella patens] >XP_024369353.1 guanine nucleotide exchange factor SPIKE 1-like isoform X1 [Physcomitrella patens]) HSP 1 Score: 80.1 bits (196), Expect = 1.300e-10 Identity = 68/254 (26.77%), Postives = 113/254 (44.49%), Query Frame = 0 Query: 1617 LIKKSLAL---RIHHEGLS-----PVVLLDDDTMWALQDLVAALASESIERYASGLWVSVDLNKALAIFLRDLLLLLHPSQVALLVSSYYTTLRTCTRTEQMEAKFEFLSILLMHDSVPFNKPWLFDLPTDVAITQEGREEGVIEGPATHWLVKLTMDECIGALSHPEAIIRSRGISLLRQTLVSHAVNPDYREAALREGVAAMYLPLIGHLVQRLESVQKLSHTAADRRELLACLLYVLQNAPQRLLRCLWQH 1863 LI KS+AL RI+ E L P + L D+ ++ L L +E ER G+ +++ LN ++A F DLL ++ QV LV+ Y+ ++ E K FL I+ H D+ + GR+ ++L L M E H + +RS+ +L Q + H + Y+ + +A Y PL+ ++ + LS T ++RE+L C+L++L+ L WQH Sbjct: 893 LIVKSMALEQSRIYSESLPPGEELPPLQLIDEVFKSIVQLYDCLLTEVHERCKKGMLLAMKLNSSIAYFCYDLLSVIEHRQVFELVALYFNKFAGVCQSLVHECKLNFLRIVCDH---------------DLFVEMPGRDP-----TERNYLASLLMQELFVTWDHEDLTLRSKAARILVQLMCKHEYDARYQTLEDKMYIAQRYFPLVDLILDEMPVFYGLSTT--EKREVLVCVLHILRYLDDASLVKAWQH 1124
BLAST of NO13G03050 vs. NCBI_GenBank
Match: XP_004359383.1 (DOCK family protein [Cavenderia fasciculata] >EGG21533.1 DOCK family protein [Cavenderia fasciculata]) HSP 1 Score: 77.0 bits (188), Expect = 1.100e-9 Identity = 108/536 (20.15%), Postives = 178/536 (33.21%), Query Frame = 0 Query: 169 VQVQCKEVSFRV----GEIEPLWCSLALYWLDCRVEKQHQVNVNLVNSGRITEVFSFEATSVAIQEKFAQVLHSLSSPCXXXXXXXXXXXXXXXXXXXXXXFLEAKNAMFSLSPEQRRSGLFLVLQVSKVLQGDPDKVLEPYSK---GKGAAASLSSKAHEAAERLGLYKQPVAFGFHQLFTDKGELASPINMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMLSLPFYKQKTGLSDSQLMNQ-IAEILSEAPTAKERTMEGRCVIVVEDLGNVKDVLTKVTPRPLLIDSTYTARIKALPPTASGPGSIAKGGGGNKPSASSSLPPSLTAPARRLVREIRTLPLWNFNSIFNPETGPGNRPRSVPINTAFSNVLYLYPLSLDKSQ------YRNLTIKIELRALRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGSYSSPRDRWEGSTALPCIYNKQRGPVFTSHTYTQVSYHTRNPQLNDEVKLRLPDVLTPAHHLVFSVYHVHVKK 691 + V CK++ F+ E EP +CSL L+ + +V R+++VF F+ I EK ++L + K A+F+++ + ++LVL+V K+L GD + EPY K L + RLG Y+Q +G +F D+GEL N P Y+ + +D+Q+++ + E A T K + + G C + + ++ N ++ T ++ + I P S A PS S P A+ + + PR N + + LY+YP S++ S RN+T KI+L D + IY + FTS T V+YH++ P DE+KL+LP L HL+F+ YH+ +K Sbjct: 326 ILVDCKDLVFKFWEKDEETEPFYCSLYLFDISKKV--------------RVSDVFHFD----FINEKTDKLLGA--------------------NQKTKDDLNATKKAIFTVAKSSQ--DIYLVLKVEKILMGDLEDQAEPYIKCNLKDKEREKLKEQIRSNCSRLGAYRQAFCWGCVPVFGDEGELGVGENTHFR------------------------------------PLYRYRPDSTDAQMLDSTLGEFSKSASTKKLKVIPGHCTVDMSEVSNYHNLFTSPFEPNTIVYNQSLTPINICQPQPLPVQSSASSSLSTTPSLLSPRPEDAIPSAKXXXXXXXXXXXXXXXKLIKEMQEFSSFPR-FEANQEYIHNLYIYPESVNFSNRSGSVTARNITCKIQL-----------------------------------------------------------MENDDNVNFDGMKLIYGRSNNDSFTSKYLTSVTYHSKTPFFYDEIKLKLPINLNSNQHLLFTFYHITCQK 725
BLAST of NO13G03050 vs. NCBI_GenBank
Match: XP_002186152.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65622.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 76.6 bits (187), Expect = 1.400e-9 Identity = 86/315 (27.30%), Postives = 129/315 (40.95%), Query Frame = 0 Query: 1614 LFGLIKKSLALRI----HHE-------GLSPVVLLDDDTMWALQDLVAALASESIE-RYASGL---WVSVDLNKALAIFLRDLLLLLHPSQVALLVSSYYT--------------------------TLRTCTRTEQME-------------------AKFEFLSILLMHDSV--PFNKPWLFDLPTDVAITQEGREEGVIEGP--ATHWLVKLTMDECIGALSHPEAIIRSRGISLLRQTLVSHAVNPDYREAALREGVAAMYLPLIGHLVQRLESVQKLSHTAADRRELLACLLYVLQNAPQRLLRCLWQHLL 1865 LF +IKKSL R+ +HE P+V LD L+ +++ L I+ R L +S D+N ++ FLRD+ L PS V L+ ++ + LR T T + + L+ D+V F K L DL + Q + GV HWL +L +D C+ H E I++R SL+ + L S + E A VA+MY L+ L+QR+ + + + R +LL +YVLQ+AP LLR LW+ LL Sbjct: 1977 LFEVIKKSLGFRVSRLFNHELSKSNRNVCPPLVELDKTLFGTLEQIISMLTDACIDSRNFDSLDHRQMSFDVNDSIIRFLRDMFSFLTPSTVYRLILTHLSRFLAKDGKNWQDRDSDIGLRCSWEVAKLRLNTITALVRFPDFVRVNSPQMLNWGDWWTRAPVLTTATFFDAVLSKFEKFRLPDLVDSEGLMQSSKATGVSNNAHLRPHWLAELVIDICLLGSEHAEQYIQNRSSSLVHELLWSCSQESVLAERA--TAVASMYATLLEKLLQRINYLSSFAPKSQLRIDLLTSAIYVLQSAPPHLLRALWRKLL 2289 HSP 2 Score: 57.4 bits (137), Expect = 8.800e-4 Identity = 60/236 (25.42%), Postives = 103/236 (43.64%), Query Frame = 0 Query: 2326 AMYKLLLHVLTTSQSDVTLIRTLQDSNLLMEAMGVECYLDSIGHHKSDWLKQIVIYCNHTRPSLRSASRSFLVSLFHLTFLHSGSITRVRLPFLHVFCHALDGIWETL------DQGKHLGGHESAEIVRQKAFTLLGPLRRCLREGIEHPLRTLPPSHPSPNPAFIERLLLLFHHAHLLTEAYVMNLLLDNMAQRYAQSISSQRLKSKDLIAQGESSGLMDEAVIQELLLRTATE 2556 A L LH L QSD+ +IRT Q S +++ G++ +LD++G W++ I C R ++R + L + T+ GS R+R+P L V ++ I T DQ + ++ + +A L PL R L + P S N AF L+ + L AY+ +L + + +S+ L+ +++ E+ GL+ I L + A+E Sbjct: 2487 ASTSLYLHALALKQSDIGIIRTFQLSGEVIKIFGIKLFLDAVGETLQHWMRVISFQCGARRANVRVEATDLLELILRSTWECFGSFFRIRVPLLAVQTEVMERIVATAAARFYRDQRRLRTAVDTFSNISAEA--SLVPLWRTLDRIEKQP--------ASQNIAFRVALIRMSQKLKKLYRAYIGARVLSCI----QGTAASKDLEDDEVVHDYETEGLLRANRINVLRVINASE 2708
BLAST of NO13G03050 vs. NCBI_GenBank
Match: XP_006972173.1 (PREDICTED: dedicator of cytokinesis protein 10 isoform X12 [Peromyscus maniculatus bairdii]) HSP 1 Score: 74.3 bits (181), Expect = 7.000e-9 Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 0 Query: 627 EGSTALPCIYNKQRGPVFTSHTYTQVSYHTRNPQLNDEVKLRLPDVLTPAHHLVFSVYHV 687 +GS A+ CIY K GP+FTS YT V +H++NP +DEVK+ LP L HHL+FS YH+ Sbjct: 696 DGSKAVKCIYGKPGGPLFTSAAYTAVLHHSQNPDFSDEVKIELPTQLHEKHHLLFSFYHI 755
BLAST of NO13G03050 vs. NCBI_GenBank
Match: XP_015865203.1 (PREDICTED: dedicator of cytokinesis protein 10 isoform X1 [Peromyscus maniculatus bairdii]) HSP 1 Score: 74.3 bits (181), Expect = 7.000e-9 Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 0 Query: 627 EGSTALPCIYNKQRGPVFTSHTYTQVSYHTRNPQLNDEVKLRLPDVLTPAHHLVFSVYHV 687 +GS A+ CIY K GP+FTS YT V +H++NP +DEVK+ LP L HHL+FS YH+ Sbjct: 721 DGSKAVKCIYGKPGGPLFTSAAYTAVLHHSQNPDFSDEVKIELPTQLHEKHHLLFSFYHI 780 The following BLAST results are available for this feature:
BLAST of NO13G03050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G03050 ID=NO13G03050|Name=NO13G03050|organism=Nannochloropsis oceanica|type=gene|length=18038bpback to top protein sequence of NO13G03050.2 >NO13G03050.2-protein ID=NO13G03050.2-protein|Name=NO13G03050.2|organism=Nannochloropsis oceanica|type=polypeptide|length=2967bpback to top protein sequence of NO13G03050.1 >NO13G03050.1-protein ID=NO13G03050.1-protein|Name=NO13G03050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=2477bpback to top Synonyms
Publications
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