NO13G03030, NO13G03030 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO13G03030
Unique Name	NO13G03030
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4946
Alignment location	chr13:846955..851900 -

Link to JBrowse

Properties


Property Name	Value
Description	SWI/SNF complex subunit SMARCC2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr13	genome	chr13:846955..851900 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeodomain-like
IPR007526	SWIRM
IPR032450	SMARCC_N
IPR032451	SMARCC_C

Homology

[Close]

BLAST of NO13G03030 vs. NCBI_GenBank
Match: KPM02440.1 (SWI/SNF complex subunit SMARCC2-like protein, partial [Sarcoptes scabiei])

HSP 1 Score: 107.8 bits (268), Expect = 2.200e-19
Identity = 51/98 (52.04%), Postives = 66/98 (67.35%), Query Frame = 0

Query:  808 HLASGLIPSWFQPSLIHPLERRCLPEFFTGRCPFKTPEIYLTYRSYMMEASSSSPSSLLTYTAVRRRLAGDAGAILRVWQFLDAWGLINGEVPADARP 906
            H+      SWF  + IH +ERR LPEFF GR   KTPE+Y+ YR++M++    +P+  LT TAVRR +AGD  AI+RV  FL+ WGLIN +V  DARP
Sbjct:  399 HIIIPSYASWFDYNCIHAVERRALPEFFNGRNKSKTPEVYIAYRNFMIDTYRLNPTEYLTLTAVRRNIAGDVCAIMRVHAFLEQWGLINYQVDIDARP 496

[Close]

BLAST of NO13G03030 vs. NCBI_GenBank
Match: ODN03445.1 (SWI/SNF complex subunit SMARCC2 [Orchesella cincta])

HSP 1 Score: 107.8 bits (268), Expect = 2.200e-19
Identity = 52/100 (52.00%), Postives = 67/100 (67.00%), Query Frame = 0

Query:  808 HLASGLIPSWFQPSLIHPLERRCLPEFFTGRCPFKTPEIYLTYRSYMMEASSSSPSSLLTYTAVRRRLAGDAGAILRVWQFLDAWGLINGEVPADARPAS 908
            H+      SWF  + IH +E+R LPEFF GR   KTPEIYL YR++M++    +P+  LT TA RR LAGD  AI+RV  FL+ WGLIN +V AD+RP +
Sbjct:  453 HIVVPSYSSWFDYNSIHTVEKRALPEFFNGRNKSKTPEIYLAYRNFMIDTYRLNPNEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTA 552

[Close]

BLAST of NO13G03030 vs. NCBI_GenBank
Match: OUT20019.1 (hypothetical protein CAS74_004752 [Pichia kudriavzevii])

HSP 1 Score: 107.8 bits (268), Expect = 2.200e-19
Identity = 70/227 (30.84%), Postives = 103/227 (45.37%), Query Frame = 0

Query:  816 SWFQPSLIHPLERRCLPEFFTGRCPFKTPEIYLTYRSYMMEASSSSPSSLLTYTAVRRRLAGDAGAILRVWQFLDAWGLINGEVPADARPASFSLRHT---------------LPSY--------------------------SFVEEEEEG--GXXXXXXXXXXXXXXXXXXXVRRLMTVVVELKDDWNEIASRCSKGGEGEGGREGGRARTPMECLVKFLSLPLE 1000
            SWF+ S IH +ER  LPEFF G+   KTPEIY+ YR++M+ +   +P+  L++TAVRR L GD+GA+LR+ +FL  WG+IN +V  + RP      +T                 SY                           F E E EG                      +++L+  V + K+DW +IA+              G  +T  EC+++FL LP+E
Sbjct:  236 SWFELSSIHDIERESLPEFFQGQNKSKTPEIYIKYRNFMVNSYRLNPNDYLSFTAVRRNLIGDSGALLRIHKFLTKWGIINYQVNPETRPQQIEPPYTGDFIVDYDTPRGMFPFESYKPPTEFPDLSHFKSLIGNKNQNETQTKFEEGEREGEPKLKKQRIIKADINKDWSEKSLQKLVDGVSQFKNDWYKIAAHV------------GDNKTAEECIIRFLQLPIE 450

[Close]

BLAST of NO13G03030 vs. NCBI_GenBank
Match: XP_013290964.1 (SWIRM domain protein [Necator americanus] >ETN68737.1 SWIRM domain protein [Necator americanus])

HSP 1 Score: 107.5 bits (267), Expect = 2.900e-19
Identity = 67/224 (29.91%), Postives = 104/224 (46.43%), Query Frame = 0

Query:  816 SWFQPSLIHPLERRCLPEFFTGRCPFKTPEIYLTYRSYMMEASSSSPSSLLTYTAVRRRLAGDAGAILRVWQFLDAWGLINGEVPADARPA--------SFSLRHTLPS---------YSFVEEEEEGGXXXXXXXXXXXXXXXXXXXVRR-----------------------LMTVVVELKDDWNEIASRCSKGGEGEGGREGGRARTPMECLVKFLSLPLE 1000
            SWF  + +H +E+R +PEFF GR   KTPE+YL+YR++M++    +P   L+ TA RR LAGD  +I+RV  FL+ WGLIN +V +DARPA         F +    P+          +F +E++EG                     ++                       L+  +   KDDWN+++                 +RT  EC+++FL LP++
Sbjct:   87 SWFDYNAVHQIEKRAVPEFFNGRNKSKTPEVYLSYRNFMVDTYRLNPFEYLSATACRRNLAGDVCSIVRVHSFLEQWGLINYQVDSDARPAPIAPPATSHFMVLADTPTGVQPICPVVSNFTQEKKEGEEVEKTPIDKLQNVGLKTDQYQKQLAAMKTKGAAPGRDWTDQETLLLLEGLEMFKDDWNKVSDHVG-------------SRTQDECILRFLQLPIQ 297

[Close]

BLAST of NO13G03030 vs. NCBI_GenBank
Match: XP_018993850.1 (hypothetical protein L202_04355 [Cryptococcus amylolentus CBS 6039] >ODN78804.1 hypothetical protein L202_04355 [Cryptococcus amylolentus CBS 6039] >ODO06707.1 hypothetical protein I350_04065 [Cryptococcus amylolentus CBS 6273])

HSP 1 Score: 107.5 bits (267), Expect = 2.900e-19
Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 0

Query:  816 SWFQPSLIHPLERRCLPEFFTGRCPFKTPEIYLTYRSYMMEASSSSPSSLLTYTAVRRRLAGDAGAILRVWQFLDAWGLINGEVPADARPAS 908
            SWF  S IHP+ERR LPEFF+ R   KTP IY  YR +M+     +P   LT TA RR LAGD GAI+RV  FL+ WGLIN +V  D+RPA+
Sbjct:   95 SWFSLSTIHPIERRSLPEFFSSRNRSKTPSIYKDYRDFMINTYRLNPGEYLTVTACRRNLAGDVGAIMRVHAFLEQWGLINYQVDPDSRPAA 186

[Close]

BLAST of NO13G03030 vs. NCBI_GenBank
Match: OCA46418.1 (hypothetical protein XENTR_v900062411mg, partial [Xenopus tropicalis])

HSP 1 Score: 107.1 bits (266), Expect = 3.800e-19
Identity = 68/213 (31.92%), Postives = 95/213 (44.60%), Query Frame = 0

Query:  813 LIPS---WFQPSLIHPLERRCLPEFFTGRCPFKTPEIYLTYRSYMMEASSSSPSSLLTYTAVRRRLAGDAGAILRVWQFLDAWGLINGEVPADARPASFS-------------------LRHTLPSYSFVEEE----EEGGXXXXXXXXXXXXXXXXXXXVRRLMTVVVELKDDWNEIASRCSKGGEGEGGREGGRARTPMECLVKFLSLPLE 1000
            +IPS   WF  + +H +ERR LPEFF G+   KTPEIYL YR++M++    +P   LT TA RR LAGD  AI+RV  FL+ WGLIN +V A++RP                       L+   P  S   ++     +                            +   KDDWN+++                 +RT  EC++ FL LP+E
Sbjct:  348 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSGLVPLQPKTPQQSSASQQMLNFPDKSKDKPSDLQNFGLRTDMYSKKNTTSKALEMYKDDWNKVSEHVG-------------SRTQDECILHFLRLPIE 547

[Close]

BLAST of NO13G03030 vs. NCBI_GenBank
Match: XP_019011417.1 (hypothetical protein I206_03517 [Kwoniella pini CBS 10737] >OCF50198.1 hypothetical protein I206_03517 [Kwoniella pini CBS 10737])

HSP 1 Score: 107.1 bits (266), Expect = 3.800e-19
Identity = 55/105 (52.38%), Postives = 66/105 (62.86%), Query Frame = 0

Query:  803 PLPLPHLASGLIPSWFQPSLIHPLERRCLPEFFTGRCPFKTPEIYLTYRSYMMEASSSSPSSLLTYTAVRRRLAGDAGAILRVWQFLDAWGLINGEVPADARPAS 908
            PL +P  +     SWF  S IHP+ERR LPEFF+ R   KTP IY  YR +M+     +P   LT TA RR LAGD GAI+RV  FL+ WGLIN +V  D RPA+
Sbjct:  119 PLVIPSYS-----SWFSLSTIHPIERRSLPEFFSSRNRSKTPAIYKDYRDFMLNTYRLNPGEYLTVTACRRNLAGDVGAIMRVHAFLEQWGLINYQVDPDTRPAA 218

[Close]

BLAST of NO13G03030 vs. NCBI_GenBank
Match: XP_019030322.1 (hypothetical protein L198_05489 [Tsuchiyaea wingfieldii CBS 7118] >ODN92695.1 hypothetical protein L198_05489 [Tsuchiyaea wingfieldii CBS 7118])

HSP 1 Score: 107.1 bits (266), Expect = 3.800e-19
Identity = 51/92 (55.43%), Postives = 62/92 (67.39%), Query Frame = 0

Query:  816 SWFQPSLIHPLERRCLPEFFTGRCPFKTPEIYLTYRSYMMEASSSSPSSLLTYTAVRRRLAGDAGAILRVWQFLDAWGLINGEVPADARPAS 908
            SWF  S IHP+ERR LPEFF+ R   KTP IY  YR +M+     +P   LT TA RR LAGD GAI+RV  FL+ WGL+N +V  D+RPA+
Sbjct:   95 SWFSLSTIHPIERRSLPEFFSSRNRSKTPSIYKDYRDFMINTYRLNPGEYLTVTACRRNLAGDVGAIMRVHAFLEQWGLVNYQVDPDSRPAA 186

[Close]

BLAST of NO13G03030 vs. NCBI_GenBank
Match: XP_011566790.1 (PREDICTED: SWI/SNF complex subunit SMARCC1-like, partial [Plutella xylostella])

HSP 1 Score: 106.7 bits (265), Expect = 4.900e-19
Identity = 64/193 (33.16%), Postives = 92/193 (47.67%), Query Frame = 0

Query:  808 HLASGLIPSWFQPSLIHPLERRCLPEFFTGRCPFKTPEIYLTYRSYMMEASSSSPSSLLTYTAVRRRLAGDAGAILRVWQFLDAWGLINGEVPADARPASFSLRHTLPSYSFVEEEEEGGXXXXXXXXXXXXXXXXXXXVRRLMTVVVEL-KDDWNEIASRCSKGGEGEGGREGGRARTPMECLVKFLSLPLE 1000
            H+      +WF  + IH +E+R LPEFF G+   KTPEIYL YR++M++    +P+  LT TA RR LAGD  AI+RV  FL+ WGL+N ++   A       R       + ++E                          L+   +EL +DDWN +A                 +RT  EC++ FL LP+E
Sbjct:  260 HIIVPSYAAWFDYNCIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPNEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLVNYQMGGAAGLKLDQYRGAARGREWTDQE------------------------TLLLLEALELHRDDWNRVAQHVG-------------SRTQDECILHFLRLPIE 415

[Close]

BLAST of NO13G03030 vs. NCBI_GenBank
Match: KTG34585.1 (hypothetical protein cypCar_00008880, partial [Cyprinus carpio])

HSP 1 Score: 106.7 bits (265), Expect = 4.900e-19
Identity = 60/183 (32.79%), Postives = 90/183 (49.18%), Query Frame = 0

Query:  823 IHPLERRCLPEFFTGRCPFKTPEIYLTYRSYMMEASSSSPSSLLTYTAVRRRLAGDAGAILRVWQFLDAWGLINGEVPADARPASFSLRHTLPSYSFVEEEEEGGXXXXXXXXXXXXXXXXXXXVRRLMTVVVE----LKDDWNEIASRCSKGGEGEGGREGGRARTPMECLVKFLSLPLEHQ 1002
            IH +ERR LPEFF G+   KTPEIYL YR++M++    +P   LT T+ RR L GD  A++R   FL+ WGL+N +V ++ RP       T P ++ + +   G                      +   +++E     KDDWN+++                 +RT  EC++ FL LP+E Q
Sbjct:  371 IHEIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRAHAFLEQWGLVNYQVDSETRPLPMGPPPT-PHFNVLADTPSGLVPLHHRPPQGKGAAGGREWTEQETLLLLEALEMYKDDWNKVSEHVG-------------SRTQDECILHFLRLPIEDQ 539

The following BLAST results are available for this feature:

BLAST of NO13G03030 vs. NCBI_GenBank

BLAST of NO13G03030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
KPM02440.1	2.200e-19	52.04	SWI/SNF complex subunit SMARCC2-like protein, part...	[more]
ODN03445.1	2.200e-19	52.00	SWI/SNF complex subunit SMARCC2 [Orchesella cincta...	[more]
OUT20019.1	2.200e-19	30.84	hypothetical protein CAS74_004752 [Pichia kudriavz...	[more]
XP_013290964.1	2.900e-19	29.91	SWIRM domain protein [Necator americanus] >ETN6873...	[more]
XP_018993850.1	2.900e-19	56.52	hypothetical protein L202_04355 [Cryptococcus amyl...	[more]
OCA46418.1	3.800e-19	31.92	hypothetical protein XENTR_v900062411mg, partial [...	[more]
XP_019011417.1	3.800e-19	52.38	hypothetical protein I206_03517 [Kwoniella pini CB...	[more]
XP_019030322.1	3.800e-19	55.43	hypothetical protein L198_05489 [Tsuchiyaea wingfi...	[more]
XP_011566790.1	4.900e-19	33.16	PREDICTED: SWI/SNF complex subunit SMARCC1-like, p...	[more]
KTG34585.1	4.900e-19	32.79	hypothetical protein cypCar_00008880, partial [Cyp...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL134	nonsL134	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR048	ncniR048	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR070	ngnoR070	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO13G03030.1	NO13G03030.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|249487	gene_9006	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO13G03030.1	NO13G03030.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO13G03030 ID=NO13G03030|Name=NO13G03030|organism=Nannochloropsis oceanica|type=gene|length=4946bp
ATGCCCTCACCCGCGCCCCCCCCCTCCGCGTTTCCTTACTCCTCCTCCTC
TCACCGTCATCCTCGCGGGGGCGGACGAGAGGGAGCGAAAGAGGACATGT
CCCCTGCACTGTTCGAGCCGTTAAAAGAGGCTTTAATTGAAGCGGCGGGG
GAAAAGGGCCTGGACCTTGGCCCTATCCGTGCAGGAGACCTCGCGAAGCT
GACAGGAGACTTGCAGCAGTTTATGGAGgtgagaaatggaagggagggga
gaagggaggggaggagagagggaaggaggggtaaattgtgtcaagagaca
cgctgacccatcacttgtccctccggccctccctccctccctctctccct
ccctccctccctctcttagGATGAGTTTGGTGTCACAGCAAAGCAGCAGG
GAAAGGAGTGGCTAATGACACGGATTCCAGCCAGGCTCTTCCGAGACTAC
TCTCCCAAGGGGCCGCTCTTCACGgtggggaggaagggagggaggggggg
ggaaagccgtgtcaaacttacactccttccttccctccctccctccctcc
ctccctccctccctcgtgcttcagATTCTATTTGCAGCCTACTCTCAAAA
AGCGCTTTTGCAATGGCGTAGCTTTAATTTCGAGGCGAAAGGCGGGATTA
AACGGGAGGAAAACGTTGCTCTCTTCCTCGCCCTCCAACGGGCTCTACAG
GACGAGGAGGGAGAGGGGGAGGAAGAGGGGGAGGGGGGAGGAAAGTGGGG
GCCTCCGGTGGTTGTTTTCGATGCCTCTGTCCCGCAGAGGGTGAGGGATG
GATTGAGGAAGGCTGTTGAGAAGCATGGAGGGGTGGTGTTGGAGGAGGAG
GGGGAGAAGGAGGTGGAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAG
GAAGGGAGGGAGGAAGGGAAAAAGGATCACCCACGTGGTGGTATGGGACC
CGGAGGAGGAAGAGGAGGAAGGGGTTGAGGAGGGGGAGGAGGAGGAGGAG
GACAAGAAGAAGAAGAAAAAGAGGGGGGCGGGGAAGACGAAGGGGCAAAC
GGAGGGGAAGCAATGgtaggtcgatagggaagggagggagggagggaggg
agggaaccctgctcgacacctatctatttagatttttcccctcatccctc
cctccctctttccctccagCCCTCCCTCCCTCTTCTTCCGCCTCCTGGGA
CGGGAGCAAAGCACTGGAAGGGTGCACCTGCACTGGTGTTACTACCCCGA
CAGCTACGACGAATGGCTGCCCTTGGAAGCCCTCCCTCCCTCCCTCCCTC
TCGACTCTGGGGATTCCGTGGTGgtacgcaccctccttccccccctcatt
cccgccctccctcccgccctccctcccctcactcgccccctcccccctcc
atccctccttccctcccccctccttccctccttccctcctcccctcctcc
agTCCGGCCCTCCCTTCGTCGTCACCGCTCGCTTCCTCCGCGACGTCGAC
AAATTCAACGAATGGGGCAACGAAGCCGACTACCTCCCTTCCTCCCTCCC
TTCCTCCCTCCCTTCCTCCCTCCCGTCCTCCTTCCCTTTCGCCTCCCTCC
GCTCGACCGCGGCCGCTCACTCCCGGCAGCGACGACACCCAGCCACGTGC
CTATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCACCCTCCATCC
CTCTTCCTCCTCCTCTTCCATCCCTGTGTCGGGCAAGAAAGAGAAGAGTC
CGAGAGGAGGAAAGGAGGGAGGGAGGGATGGCGCGCCCTTTCCCCCTCCC
TCCCTCCCTCCCTCCCCCGCCCCTCCGCATCCCAAGAAGAAGACGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTGAAGGCCACTTCCCTTG
CTTTTATTTCATCCTCATCGGAGTCCCCGGTGGTGAAGGGGAGGGAGGGA
GGGAGGGAGGGCGGGCAGAAAAGAGGGAGGAACGAGGTGAGGGATGGAGG
ACAGAAGGTCAAGAAAGGGAAGGTCAACAAGGAGGAGGAAAAAGAAGACG
GGAAAGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGGGGAGGAGGAGGAG
GAGGAGGAGAAGGAGGAGAGAAGGGGAAGGGGCGGTGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGCGCTGAACAAGAAAAAGATGAAGGAAGCGAGGAGGAAACAGAGGGAG
AGAGAGGGTGTAGCCGCCGTATTTGTAGGAGAAGGAGGAGGGATGGTGGA
Ggtaggaggggagggagggagggagggagggagtgagtgagggagggagg
gaggttgggaggttgggagggagtgagggagggaaggagggagggaagtc
gggagggaagtcgggagtgagggagggagggagggagggaggagggaggg
cttgcttgcgtgggtcttggaaggttggatgtagagaggagccgcaaaaa
tgaaggcactcctcactttgcctccctccccctgtcttccctccctcctt
ctttccttccttccctccttcccttcctcctttttcagATCACGACAAGC
AACACTTCTTCTTCTTTTTCTTCTTCTGTTGCTGCTGCCGGTGTTGGTGT
TGGTGTTGGTGATGGTACTGCTGCCGGACTTCACCCTCCTCCGTCGGAGG
CCCCGATACCGAGGGGGAAGGGAGGGGAGGACGGGAAGCATAGCACAAGC
CTGATTGATGTTAGAGCAGGAGGCGTAAAAATTGTCAAGgtaggtaggta
ggtaggtagggagggagggagggagggagggagggagggagggagagggt
cgtgactcactttcccctccttcattccaaacagACGGTTCACATCAAGG
AGGAGGCGAAGCAAGAGAAGGTGAAGGAAGGGGTGGAGGAAGGGGTGGAG
GAAGGGAAGAAGGAAAGAGAGGAGGCTGCAGAGGATACAATTTCTTCCCA
GCAGCAACAGCAGCAGCAGCAGTGGCAGCAGCAGCAAAAGGAGGCGAAAG
GCACTGGCTCTTCTCCTTCTTCCACACGCAGCAGTCGCACAAGCCACCTC
CGTCCCCTCCCTCCCTCCCTCCCATCCCCCCCCCCTCCCTCCGCTCCTGC
CGCTTCCCATCCCATCACCAAAAGCGGTTTTCCCTCCCTACCAACTTTCG
ACCCTGCCTACCCCTCCCTCCCCCCCTCCCTCCCTCCCGCCCTCCCTCCC
TCGTCTTTTCGCCCTCTTCCCCTCCCTCACCTGGCCTCGGGCTTGATCCC
TTCCTGGTTCCAGCCCTCCCTCATTCATCCGTTGGAAAGGCGTTGCCTGC
CGGAGTTTTTCACCGGCCGTTGCCCCTTCAAAACCCCCGAGgtaggccgt
tcatcctccttccctcccttcctctcccttccttctggtctttattcacg
tccatccctccctccctccctccctccctccctccctccctccctccatt
ccttccttcgtccagATCTACCTCACCTACCGCTCCTATATGATGGAAGC
CTCCTCCTCCTCTCCTTCCTCTCTCCTCACATACACCGCCGTCCGTCGAC
GCCTCGCAGGCGATGCAGGTGCCATCCTCCGGGTATGGCAGTTTCTGGAT
GCTTGGGGACTCATCAATGGAGAGgtacaccctttcctccgtccctctct
ccctctctccctccctccctccttccctccctctctccctccctctttcc
cttccttcgtttctggcagtttttgggtgcctgagaactcatcagcaaag
ggggtaattcccctccctcccttcctccctccctccctcccttcctccct
ccctccctccctccctccctccctccctccctccccccttccctccctcc
ctcccgccctccctccctctctccctactccgtgtgtggggttcctcaaa
gaggggcactgctcgttccctccctcccttcgtacacatatcaacttcca
ggcagcatcatcaatgtctcccttcctttctccctccctccctccctccc
tctttcagGTCCCCGCCGACGCCCGTCCAGCTTCCTTCTCCCTCCGTCAT
ACCCTCCCCTCCTACTCCTTTGTGGAAGAGGAGGAGGAAGGGGGGGAGGG
CAGGAAGGATGGAGGGATAGGAAAGGAGGAGGAGGGATGGGATGAGGAGG
AGGTCAGAAGGCTGATGACGGTGGTAGTGGAGCTAAAGGACGACTGGAAT
GAAATAGCCTCGAGATGTTCGAAAGGCGGAGAGGGAGAAGGAGGGAGGGA
GGGCGGGAGGGCGAGGACGCCGATGGAATGTCTTGTGAAGTTTTTATCGT
TGCCCTTGGAGCACCAGACAGGGGGAGGAGGAGGAGGAGGAGGAGGAAGG
GGAGGAGGAATGCTGGGCTTAGTGCGACAGCTGGCCCAGAGCATCGATCC
ACAAAgtaagggcctccatccccatcacgctgtcccttccaccgtctcct
tcctcgccctccctcccaccctccctcccttcctctgcccgtcgctcact
atctcccccccccaccctcccacctctctccccgctcccttctcagTTGT
GAGAGCCACAATCTCAGCAGCATGGGCCCAGATTCAAGCTCTTCCTCCTC
CCTCGTCCTCCACCAGCCCCTCCTTCCCTCCCTCCCTCCCTCCTCCTCTG
CTGGCCGCGGGGACGACCGTCCTGTCCTTGTTGTCGCTGCAGGCCAAAGA
GGGACAAAGGGAGGAAGAGGAGGAGGTGCGGCGACTGATGGACGACCTGA
TCGACCTGAAGTTGAAGAGGTGGGAAATGAGGGGAAAGGAGGTGGAGGAG
AGGGAGAGGATACTGGAGGAGGAGAGGGAGGCTCTAAGGAGGGAGAGGGA
AGAACTGTTTGCACGGCGGGCCCTGGCAATTGTGCAGAGGGAATGA

protein sequence of NO13G03030.1

>NO13G03030.1-protein ID=NO13G03030.1-protein|Name=NO13G03030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1147bp
MPSPAPPPSAFPYSSSSHRHPRGGGREGAKEDMSPALFEPLKEALIEAAG
EKGLDLGPIRAGDLAKLTGDLQQFMEDEFGVTAKQQGKEWLMTRIPARLF
RDYSPKGPLFTILFAAYSQKALLQWRSFNFEAKGGIKREENVALFLALQR
ALQDEEGEGEEEGEGGGKWGPPVVVFDASVPQRVRDGLRKAVEKHGGVVL
EEEGEKEVEGGRKGGRKGGRKGGRKGKRITHVVVWDPEEEEEEGVEEGEE
EEEDKKKKKKRGAGKTKGQTEGKQCPPSLFFRLLGREQSTGRVHLHWCYY
PDSYDEWLPLEALPPSLPLDSGDSVVSGPPFVVTARFLRDVDKFNEWGNE
ADYLPSSLPSSLPSSLPSSFPFASLRSTAAAHSRQRRHPATCLSLPPSLP
PSLPSTLHPSSSSSSIPVSGKKEKSPRGGKEGGRDGAPFPPPSLPPSPAP
PHPKKKTEGGREGGREGGRVKATSLAFISSSSESPVVKGREGGREGGQKR
GRNEVRDGGQKVKKGKVNKEEEKEDGKEEEEEEGEEEGEEEEEEEKEERR
GRGGGGGGGGGGGGGGGGGGGGGGGGALNKKKMKEARRKQREREGVAAVF
VGEGGGMVEITTSNTSSSFSSSVAAAGVGVGVGDGTAAGLHPPPSEAPIP
RGKGGEDGKHSTSLIDVRAGGVKIVKTVHIKEEAKQEKVKEGVEEGVEEG
KKEREEAAEDTISSQQQQQQQQWQQQQKEAKGTGSSPSSTRSSRTSHLRP
LPPSLPSPPPPSAPAASHPITKSGFPSLPTFDPAYPSLPPSLPPALPPSS
FRPLPLPHLASGLIPSWFQPSLIHPLERRCLPEFFTGRCPFKTPEIYLTY
RSYMMEASSSSPSSLLTYTAVRRRLAGDAGAILRVWQFLDAWGLINGEVP
ADARPASFSLRHTLPSYSFVEEEEEGGEGRKDGGIGKEEEGWDEEEVRRL
MTVVVELKDDWNEIASRCSKGGEGEGGREGGRARTPMECLVKFLSLPLEH
QTGGGGGGGGGRGGGMLGLVRQLAQSIDPQIVRATISAAWAQIQALPPPS
SSTSPSFPPSLPPPLLAAGTTVLSLLSLQAKEGQREEEEEVRRLMDDLID
LKLKRWEMRGKEVEERERILEEEREALRREREELFARRALAIVQRE*

Synonyms

Publications