NO13G02940, NO13G02940 (gene) Nannochloropsis oceanica

Overview
NameNO13G02940
Unique NameNO13G02940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4402
Alignment locationchr13:818323..822724 -

Link to JBrowse

Properties
Property NameValue
Descriptionvon Willebrand factor A domain-containing protein 5A
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:818323..822724 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf
IPR002035VWF_A
IPR013694VIT
Homology
BLAST of NO13G02940 vs. NCBI_GenBank
Match: XP_004338794.1 (von Willebrand factor type A domain containing protein [Acanthamoeba castellanii str. Neff] >ELR16781.1 von Willebrand factor type A domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 162.5 bits (410), Expect = 5.100e-36
Identity = 147/532 (27.63%), Postives = 235/532 (44.17%), Query Frame = 0
Query:   11 YRHAETALGSWPEDLLMLE----GNVRSASRITHLVPHTLKE---KTMVSVKEEGKEGSFHAVVPYLTEDFVLL--IGFEERVKDRAWLEPSTGALTVSVGL-GEDQLPDTEESKGEFVFVIDRSGSMDGSKIQHAREALALCISALPEGSRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTSAXXXXXXXXXXXXXAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPLRAL--STLPPSLPRQVFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGGGVSRGLVKGVGREGGGESVFVVDGERMQGKIMRQMNRAVGPAVGGSRVEVEGGKEGRVVVLSVSPRKPRPLFTGGRLLFYALLDPNTLVQNKKTKEKGNEGEEGWVDVGDEKEGWREEGLTIRVRGTGPGGEQVVIPVPLQIVPRGFAPSGMLRALAVKSVLSDLEE------XXXXXXXXXXXXXXXXXXXXVASGVLCKYTSFVAVEEGGEGGRFGGSKRVYLPLAFVTRTNMGHDPWGQG 525
            Y+ A  +  S P   L ++     N+RS S  +H +     E   +  V++  +  +         + +D ++L  +    +   R  ++    + TV V L  + +L D E+   E +F++DRSGSM GS++   ++ L + + +L EG+ F I+ FG++   LF   +                                    V + D+  ++A +H  +M AN+GGT +L PL+ +  +      PRQ+F++TDG+VGNT E + +VR+    E TR F  G+G   S+ LVKG+ + G G   FV  GE M+ K+MRQ++RA+ PA+    V  +G     V     +P +  PLF GGRL+ Y +++           E G E E   V +G +               T     + V+ V L    +G     +L  LA +++L DLEE                          +ASGVL K+T+FVAVEE  E    G  K   +P+ F         P G G
Sbjct:  176 YKAAAASSNSAPNLKLRVDFDMTSNIRSLSSPSHPITFEFGEEPNQATVTLSSDSAQAQ-------VAKDLIVLTKLAKPHQACGRVEVDEKGTSKTVMVSLFPQLELADDEDIYTEMIFIVDRSGSMSGSRMNQVKDTLQIFLRSLGEGTMFNIIGFGTSTQHLFREGS------------------------------------VEYNDKNLEIATKHVKEMSANLGGTNILRPLQEVLRAQTKEGYPRQLFILTDGEVGNTQECVDFVRKHA--ETTRVFTFGVGNEASQDLVKGLAKAGEGFFEFVRSGEAMEEKVMRQLHRAMQPALTDITVTWKGAAARHV---QPAPFRLPPLFCGGRLVVYGIIESAAAAD-----EAGGEVE---VVIGAK---------------TAVKPFEAVVKVDLSKASKG----TLLNKLAARTLLKDLEEGRSYVHDREGVVKAGKDVVAEMVRVSLASGVLSKHTAFVAVEERDEATE-GTMKVRKIPITFEKLVPARSQPGGIG 631          
BLAST of NO13G02940 vs. NCBI_GenBank
Match: XP_004347510.1 (von Willebrand domain-containing protein [Capsaspora owczarzaki ATCC 30864] >KJE94062.1 von Willebrand domain-containing protein [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 159.5 bits (402), Expect = 4.300e-35
Identity = 105/285 (36.84%), Postives = 147/285 (51.58%), Query Frame = 0
Query:  110 DTEESKGEFVFVIDRSGSMDGSKIQHAREALALCISALPEGSRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTSAXXXXXXXXXXXXXAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPLRALSTLP--PSLPRQVFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGGGVSRGLVKGVGREGGGESVFVVDGERMQGKIMRQMNRAVGPAVGGSRV-----EVEGG-KEGRVVVLSVSPRKPR--------------PLFTGGRLLFYALLDP 373
            + ++ K E +FV+DRSGSM GS+I  AR AL L + +LP  SRF I+ FG ++  LFP +                                     V ++      AL+H + M+AN+GGTELLAPLRA+  +      PRQVF++TDGQV NT +V+  V  + +    R+FA+GIG GVS  LV+G+ R G G + FVVDGERM+ K+MRQ+  A+ P++   RV     E+     E   V   +  +KP               P+F G R L +A L P
Sbjct:  285 ELDDIKCEVIFVVDRSGSMGGSQILQARNALTLFLKSLPTNSRFNIVGFGDSYQTLFPEA-------------------------------------VGYSQANLNTALKHVSTMDANLGGTELLAPLRAIERMKTRADFPRQVFVLTDGQVSNTDQVIAQVNSDSK--NARYFALGIGSGVSHHLVEGIARAGKGNAQFVVDGERMETKVMRQLKDAIQPSLTDVRVNWGLDEIPAAVVEPPKVKSLLGYKKPEPAERPFRQAPFTVPPVFDGSRFLIFAFLKP 530          
BLAST of NO13G02940 vs. NCBI_GenBank
Match: XP_004333812.1 (von Willebrand factor type A domain containing protein [Acanthamoeba castellanii str. Neff] >ELR11799.1 von Willebrand factor type A domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 158.3 bits (399), Expect = 9.600e-35
Identity = 108/280 (38.57%), Postives = 151/280 (53.93%), Query Frame = 0
Query:   75 VLLIGFEERVKDRAWLE--PSTGALTVSVGLGE--DQLPDTEESKGEFVFVIDRSGSMDGSKIQHAREALALCISALPEGSRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTSAXXXXXXXXXXXXXAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPLRALSTLP--PSLPRQVFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGGGVSRGLVKGVGREGGGESVFVVDGERMQGKIMRQMNRAVGPAV--GGSRVEVEGGKEGRVV 347
            VLL   E R + +A  E  P  G+    V +    D L D +    E +FV+DRSGSM G +I  A+ ALAL   +LP G+RF ++ FGS +  LFP+S                                      ++ DET + A +H A + A++GGT+LL PLR + + P  P  PRQVF++TDG+VGNT EV+  VR+  R   TR FA+GIG  VS  LV G+ + G G + +VV GER++ K++RQ+ RA+ P V   GS  + EG  +G VV
Sbjct:  177 VLLGQLESRGEPQAVAEVDPVAGSAVAMVSIVPQLDHLRDADVI-AELLFVVDRSGSMSGGRIDQAKNALALFFHSLPVGTRFNVIGFGSHYVKLFPSSR-------------------------------------VYDDETLEQANQHVAAIRADLGGTQLLEPLRDVLSSPSDPKYPRQVFVLTDGEVGNTNEVIECVRKHAR--DTRVFALGIGSNVSMELVNGLAKAGRGYAEYVVSGERLEAKVLRQLKRALQPPVIEYGSAAKGEGKDDGVVV 416          
BLAST of NO13G02940 vs. NCBI_GenBank
Match: XP_004356459.1 (von Willebrand factor type A domain containing protein [Acanthamoeba castellanii str. Neff] >ELR24559.1 von Willebrand factor type A domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 153.3 bits (386), Expect = 3.100e-33
Identity = 119/408 (29.17%), Postives = 187/408 (45.83%), Query Frame = 0
Query:   95 GALTVSVGLGEDQLPDTEES-KGEFVFVIDRSGSMDGSKIQHAREALALCISALPEGSRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTSAXXXXXXXXXXXXXAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPLRALSTLPP--SLPRQVFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGGGVSRGLVKGVGREGGGESVFVVDGERMQGKIMRQMNRAVGPAVGGSRVEVEGGKEGRVVVLSVSPRKPRPLFTGGRLLFYALLDPNTLVQNKKTKEKGNEGEEGWVDVGDEKEGWREEGLTIRVRGTGPGGEQVVIPVPLQIVPRGFAPSGMLRALAVKSVLSDLEEXXXXXXXXXXXXXXXXXXXXV--------ASGVLCKYTSFVAVEE 492
            G  TV V L      D +E    E +F++DRSGSM GS++Q  ++ L + + +L EG++F I+ FGS    LFP+ +                                    V + D+  ++A +H  QM AN+GGT++L PL  +   PP    PRQ+F++TDG+V NT E + +VR+    + TR F  G+G   S+ LVKG+ + G G   FV  GE M+ K+MRQ+ RA+ PA+    V  +G  +     +  +P +  P+F GG+L+ Y ++                  ++G VD  +  E   +    ++                +Q+      P  +L  LA K++L  +++                    V        ASGVLCK+T+FVAVEE
Sbjct:  242 GTKTVMVSLYPKLAQDDDEDIYTEMIFIVDRSGSMAGSRMQQVKDTLHIFLRSLGEGTQFNIIGFGSRTQHLFPSGS------------------------------------VEYNDKNLELATKHVDQMFANLGGTDILKPLTEVLQQPPKEGYPRQLFILTDGEVNNTQECIQFVRKHA--DTTRVFTFGVGNEASQDLVKGLAKSGEGFFEFVRPGEGMEEKVMRQLRRAMQPALTDVTVTWKGATQ-----VEPAPFRFAPVFCGGQLVVYGIV------------------KKGQVDSDNNVEVVVQAKTVLK-----------PFEAAIQVDLSKAKPGNLLHKLAAKTLLKSIDDGRSYLHDAAGNVKSGGQAGLVAEAVRISLASGVLCKHTAFVAVEE 577          
BLAST of NO13G02940 vs. NCBI_GenBank
Match: XP_004338797.1 (von Willebrand factor type A domain containing protein [Acanthamoeba castellanii str. Neff] >ELR16784.1 von Willebrand factor type A domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 152.9 bits (385), Expect = 4.000e-33
Identity = 140/518 (27.03%), Postives = 226/518 (43.63%), Query Frame = 0
Query:   11 YRHAETALGSWPEDLLMLE----GNVRSASRITHLVPHTLKE---KTMVSVKEEGKEGSFHAVVPYLTEDFVLL--IGFEERVKDRAWLEPSTGALTVSVGL-GEDQLPDTEESKGEFVFVIDRSGSMDGSKIQHAREALALCISALPEGSRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTSAXXXXXXXXXXXXXAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPLRAL--STLPPSLPRQVFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGGGVSRGLVKGVGREGGGESVFVVDGERMQGKIMRQMNRAVGPAVGGSRVEVEGGKEGRVVVLSVSPRKPRPLFTGGRLLFYALLDPNTLVQNKKTKEKGNEGEEGWVDVGDEKEGWREEGLTIRVRGTGPGGEQVVIPVPLQIVPRGFAPSGMLRALAVKSVLSDLEE------XXXXXXXXXXXXXXXXXXXXVASGVLCKYTSFVAVEEGGEGGRFGGSKRVYLPLAF 511
            Y+ A  +  S P   L ++     N+RS S  +H +     E   +  V++  +  +         + +D ++L  +    +   R  ++    + TV V L  + +L D E+   E +F++DRSGSM GS++   ++ L + + +L EG+ F I+ FG++   LF   +                                    V + D+  ++A +H  +M AN+GGT +L PL+ +  +      PRQ+F++TDG+VGNT E + +VR+    E TR F  G+G   S+ LVKG+ + G G   FV  GE M+ K+MRQ++RA+ PA+    V  +G     V     +P +  PLF GGRL+ Y +                       V +G +               T     + V+ V L    +G     +L  LA +++L DLEE                          +ASGVL K+T+FVAVEE  E    G  K   +P+ F
Sbjct:  176 YKAAAASSNSAPNLKLRIDFDMTSNIRSLSSPSHPITFEFGEEPNQATVTLSSDSAQAQ-------VAKDLIVLTKLAKPHQACGRVEVDEKGTSKTVMVSLFPQLELADDEDIYTEMIFIVDRSGSMSGSRMNQVKDTLQIFLRSLGEGTMFNIIGFGTSTQHLFREGS------------------------------------VEYNDKNLEIATKHVKEMSANLGGTNILRPLQEVLRAQTKEGYPRQLFILTDGEVGNTQECVDFVRKHA--ETTRVFTFGVGNEASQDLVKGLAKAGEGFFEFVRSGEAMEEKVMRQLHRAMQPALTDITVTWKGAAASHV---QPAPFRLPPLFCGGRLVVYGIXXXXXXXXXXXXXXXXXVE----VVIGAK---------------TAVKPFEAVVKVDLSKASKG----TLLNKLAARTLLKDLEEGRSYVHDREGAVKAGKDVVAEMVRVSLASGVLSKHTAFVAVEERDEATE-GTMKVRKIPITF 621          
BLAST of NO13G02940 vs. NCBI_GenBank
Match: XP_019222861.1 (PREDICTED: uncharacterized protein LOC100702702 isoform X1 [Oreochromis niloticus])

HSP 1 Score: 152.5 bits (384), Expect = 5.300e-33
Identity = 106/288 (36.81%), Postives = 151/288 (52.43%), Query Frame = 0
Query:   87 RAWLEPST--GALTVSVGLGEDQLPDTEESKGEFVFVIDRSGSMDGSKIQHAREALALCISALPEGSRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTSAXXXXXXXXXXXXXAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPLRALSTLP--PSLPRQVFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGGGVSRGLVKGVGREGGGESVFVVDGERMQGKIMRQMNRAVGPAVGGSRVEVEGGKEGRVVVLSVSPRKPRPLFTGGRLLFYALL 371
            +A  EP +  G   V V L  +       S GEFVF++DRSGSM  ++I+ A++ L L + +LP G  F I  FGS +  +FP S                                     V +T +T + AL+   QM+A++GGTE+L PL+ + + P  PS PRQ+F+ TDG+VGNT EV+  V++  + +  R F+ GIG G S  L+ G+ +EGGG + F+   +RMQ K+M+ +  A+ P V G  V  +  KE  V VLS  P K   LF G R L YA L
Sbjct: 1513 QASAEPGSLMGDSMVMVSLYPEFPQSVMASCGEFVFLMDRSGSMSNTRIRSAKDTLLLLLKSLPMGCYFNIYGFGSRYEHIFPKS-------------------------------------VEYTQQTMEEALKSVEQMQADLGGTEILEPLKHIYSQPCIPSQPRQLFVFTDGEVGNTKEVIDLVKK--KSDSHRCFSFGIGEGASSALINGMAKEGGGHAQFITGTDRMQAKVMQSLRFALQPVVVGISVTWDLPKEVSVTVLS-PPIK--TLFQGQRSLIYAQL 1758          
BLAST of NO13G02940 vs. NCBI_GenBank
Match: XP_019222862.1 (PREDICTED: uncharacterized protein LOC100702702 isoform X2 [Oreochromis niloticus])

HSP 1 Score: 152.5 bits (384), Expect = 5.300e-33
Identity = 106/288 (36.81%), Postives = 151/288 (52.43%), Query Frame = 0
Query:   87 RAWLEPST--GALTVSVGLGEDQLPDTEESKGEFVFVIDRSGSMDGSKIQHAREALALCISALPEGSRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTSAXXXXXXXXXXXXXAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPLRALSTLP--PSLPRQVFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGGGVSRGLVKGVGREGGGESVFVVDGERMQGKIMRQMNRAVGPAVGGSRVEVEGGKEGRVVVLSVSPRKPRPLFTGGRLLFYALL 371
            +A  EP +  G   V V L  +       S GEFVF++DRSGSM  ++I+ A++ L L + +LP G  F I  FGS +  +FP S                                     V +T +T + AL+   QM+A++GGTE+L PL+ + + P  PS PRQ+F+ TDG+VGNT EV+  V++  + +  R F+ GIG G S  L+ G+ +EGGG + F+   +RMQ K+M+ +  A+ P V G  V  +  KE  V VLS  P K   LF G R L YA L
Sbjct: 1500 QASAEPGSLMGDSMVMVSLYPEFPQSVMASCGEFVFLMDRSGSMSNTRIRSAKDTLLLLLKSLPMGCYFNIYGFGSRYEHIFPKS-------------------------------------VEYTQQTMEEALKSVEQMQADLGGTEILEPLKHIYSQPCIPSQPRQLFVFTDGEVGNTKEVIDLVKK--KSDSHRCFSFGIGEGASSALINGMAKEGGGHAQFITGTDRMQAKVMQSLRFALQPVVVGISVTWDLPKEVSVTVLS-PPIK--TLFQGQRSLIYAQL 1745          
BLAST of NO13G02940 vs. NCBI_GenBank
Match: XP_019222863.1 (PREDICTED: uncharacterized protein LOC100702702 isoform X3 [Oreochromis niloticus])

HSP 1 Score: 152.5 bits (384), Expect = 5.300e-33
Identity = 106/288 (36.81%), Postives = 151/288 (52.43%), Query Frame = 0
Query:   87 RAWLEPST--GALTVSVGLGEDQLPDTEESKGEFVFVIDRSGSMDGSKIQHAREALALCISALPEGSRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTSAXXXXXXXXXXXXXAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPLRALSTLP--PSLPRQVFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGGGVSRGLVKGVGREGGGESVFVVDGERMQGKIMRQMNRAVGPAVGGSRVEVEGGKEGRVVVLSVSPRKPRPLFTGGRLLFYALL 371
            +A  EP +  G   V V L  +       S GEFVF++DRSGSM  ++I+ A++ L L + +LP G  F I  FGS +  +FP S                                     V +T +T + AL+   QM+A++GGTE+L PL+ + + P  PS PRQ+F+ TDG+VGNT EV+  V++  + +  R F+ GIG G S  L+ G+ +EGGG + F+   +RMQ K+M+ +  A+ P V G  V  +  KE  V VLS  P K   LF G R L YA L
Sbjct: 1492 QASAEPGSLMGDSMVMVSLYPEFPQSVMASCGEFVFLMDRSGSMSNTRIRSAKDTLLLLLKSLPMGCYFNIYGFGSRYEHIFPKS-------------------------------------VEYTQQTMEEALKSVEQMQADLGGTEILEPLKHIYSQPCIPSQPRQLFVFTDGEVGNTKEVIDLVKK--KSDSHRCFSFGIGEGASSALINGMAKEGGGHAQFITGTDRMQAKVMQSLRFALQPVVVGISVTWDLPKEVSVTVLS-PPIK--TLFQGQRSLIYAQL 1737          
BLAST of NO13G02940 vs. NCBI_GenBank
Match: XP_019222864.1 (PREDICTED: uncharacterized protein LOC100702702 isoform X4 [Oreochromis niloticus])

HSP 1 Score: 152.5 bits (384), Expect = 5.300e-33
Identity = 106/288 (36.81%), Postives = 151/288 (52.43%), Query Frame = 0
Query:   87 RAWLEPST--GALTVSVGLGEDQLPDTEESKGEFVFVIDRSGSMDGSKIQHAREALALCISALPEGSRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTSAXXXXXXXXXXXXXAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPLRALSTLP--PSLPRQVFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGGGVSRGLVKGVGREGGGESVFVVDGERMQGKIMRQMNRAVGPAVGGSRVEVEGGKEGRVVVLSVSPRKPRPLFTGGRLLFYALL 371
            +A  EP +  G   V V L  +       S GEFVF++DRSGSM  ++I+ A++ L L + +LP G  F I  FGS +  +FP S                                     V +T +T + AL+   QM+A++GGTE+L PL+ + + P  PS PRQ+F+ TDG+VGNT EV+  V++  + +  R F+ GIG G S  L+ G+ +EGGG + F+   +RMQ K+M+ +  A+ P V G  V  +  KE  V VLS  P K   LF G R L YA L
Sbjct: 1513 QASAEPGSLMGDSMVMVSLYPEFPQSVMASCGEFVFLMDRSGSMSNTRIRSAKDTLLLLLKSLPMGCYFNIYGFGSRYEHIFPKS-------------------------------------VEYTQQTMEEALKSVEQMQADLGGTEILEPLKHIYSQPCIPSQPRQLFVFTDGEVGNTKEVIDLVKK--KSDSHRCFSFGIGEGASSALINGMAKEGGGHAQFITGTDRMQAKVMQSLRFALQPVVVGISVTWDLPKEVSVTVLS-PPIK--TLFQGQRSLIYAQL 1758          
BLAST of NO13G02940 vs. NCBI_GenBank
Match: XP_019222865.1 (PREDICTED: uncharacterized protein LOC100702702 isoform X5 [Oreochromis niloticus])

HSP 1 Score: 152.5 bits (384), Expect = 5.300e-33
Identity = 106/288 (36.81%), Postives = 151/288 (52.43%), Query Frame = 0
Query:   87 RAWLEPST--GALTVSVGLGEDQLPDTEESKGEFVFVIDRSGSMDGSKIQHAREALALCISALPEGSRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTSAXXXXXXXXXXXXXAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPLRALSTLP--PSLPRQVFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGGGVSRGLVKGVGREGGGESVFVVDGERMQGKIMRQMNRAVGPAVGGSRVEVEGGKEGRVVVLSVSPRKPRPLFTGGRLLFYALL 371
            +A  EP +  G   V V L  +       S GEFVF++DRSGSM  ++I+ A++ L L + +LP G  F I  FGS +  +FP S                                     V +T +T + AL+   QM+A++GGTE+L PL+ + + P  PS PRQ+F+ TDG+VGNT EV+  V++  + +  R F+ GIG G S  L+ G+ +EGGG + F+   +RMQ K+M+ +  A+ P V G  V  +  KE  V VLS  P K   LF G R L YA L
Sbjct: 1513 QASAEPGSLMGDSMVMVSLYPEFPQSVMASCGEFVFLMDRSGSMSNTRIRSAKDTLLLLLKSLPMGCYFNIYGFGSRYEHIFPKS-------------------------------------VEYTQQTMEEALKSVEQMQADLGGTEILEPLKHIYSQPCIPSQPRQLFVFTDGEVGNTKEVIDLVKK--KSDSHRCFSFGIGEGASSALINGMAKEGGGHAQFITGTDRMQAKVMQSLRFALQPVVVGISVTWDLPKEVSVTVLS-PPIK--TLFQGQRSLIYAQL 1758          
The following BLAST results are available for this feature:
BLAST of NO13G02940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_004338794.15.100e-3627.63von Willebrand factor type A domain containing pro... [more]
XP_004347510.14.300e-3536.84von Willebrand domain-containing protein [Capsaspo... [more]
XP_004333812.19.600e-3538.57von Willebrand factor type A domain containing pro... [more]
XP_004356459.13.100e-3329.17von Willebrand factor type A domain containing pro... [more]
XP_004338797.14.000e-3327.03von Willebrand factor type A domain containing pro... [more]
XP_019222861.15.300e-3336.81PREDICTED: uncharacterized protein LOC100702702 is... [more]
XP_019222862.15.300e-3336.81PREDICTED: uncharacterized protein LOC100702702 is... [more]
XP_019222863.15.300e-3336.81PREDICTED: uncharacterized protein LOC100702702 is... [more]
XP_019222864.15.300e-3336.81PREDICTED: uncharacterized protein LOC100702702 is... [more]
XP_019222865.15.300e-3336.81PREDICTED: uncharacterized protein LOC100702702 is... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02940.2NO13G02940.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO13G02940.1NO13G02940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633267gene_9013Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02940.2NO13G02940.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO13G02940.1NO13G02940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02940 ID=NO13G02940|Name=NO13G02940|organism=Nannochloropsis oceanica|type=gene|length=4402bp
ATATAAAGCACATCATCCTCCTCCTCGCTTGAATGTTGCAACATGCAGGC
TCTGCGGGAGTAATTACCGCTGAAGCTATGGAGTTTTCTCAATACTTGTT
TGAACATAGAGGTTAAGGAAAATATCTCTCACTCTACAGGTCCACTCTCT
GAATCTGTTGACAGACCCTCACTCAACCCGAGGCATCCCCAAAAGTCCAG
TGCAAAGACAGACAGAAAGTCACTCATGAGTGCAACAACCCTCTCTTCAC
ATGATCAAATGAGAAAGGTCGTGGAAAAGTCACTCACATAATCTGTCATA
CAGTAGACTCACTTGCAATAAAGATATTTCAGGGACATTCTGGAGTTAGC
TCGAGAGGATGATACAGGGATAATACCGCTGTCGCAAATAAGAACTTATG
TTCCATCGACATACTAGCCAATGAGGGCATGGGTTCGCTACATTTAATCC
CGTACTATCCCATTCCAAAAAGACAGCAACACAACCAACTCGATTCTTCA
CCCTCTCTGCCATCCGGCCCTCGAACGCATCAACAACAACAAAAAAACAC
ACAAACCCCCCTCTTTTAAAAAAAGTAAATGACTACCGTGGACATTCCCG
ATTATGACGGTGCTTACCAGGCCAAACCGGACACACCTGAGCGTTTCTAT
CTATGTACAGCTTTCAATTTTGGTCTTACATGTAAGTCTAACTTCCTATC
CCCTCCCCTCCTCTTCTTCATGCCCCTCTCCCCGTCTTCCTTCACAGCAT
TATTCACGAAGAAGCTGACCAACTATTCGCATATACTTGGATGACCCACT
TACAGGTGCAGCAGGGAGGAGCGTGCCATTGAAGCGTGTGAACGTCAAAT
GCAACGTGCTAGACTTCCTCGCCGAGgtaaagaaggtggaagaaggaagg
gaaggaaaggaagggaaggaggagagaaggaatcgaagaatagcagtagt
gagtgtttttttaccattttccaaagtcatacagccttgatgggtcttat
atgaagagtgatcataataagcgacaggaaaagcatttgatctctttcat
cagctcacattgtgatccacccctccgtccctccctccctccccttttat
catatctctcagGTCTCAGTCGAGCAGACCTTTCAAAATGATGACCCCTC
CACGGCCGTTGAAGTCATCTACCGTTTCCCACTGGACGCCCAAGCCATCC
TCACCTCATTTTCTACGCAGAAGAACGAGGGTCCCGTCATCCATGGCAAG
GTGACGGAGAAGGAAGAGGCGAAAGCCACGTATGAGGAAGCCTTGGCCTG
TGGACAAGGTGGGTATCTGCTGCATGAGGAAGGGGAATTGAAAGACGTTT
TCTCGCTCAAAGTGGGAAACTTGCAACCAGGAGAGACGGTCAATGTCAAA
CTAACGTATGTTGCTCAGGTGGATGAGGAGGAAGAGGAGGAGAAGGAGGA
GAAGGAGGAGGGGGAGGAAGCGGAAGGAAGCAAGTTGCCACAGAAGACGA
CACCCAAGAATAAGAAAAACAAGAAAAAAAGCTCCTCCTTGCGTCTCGTC
ATCCCCACGGCCGTCGCCCCTCGCTATATGCCGTCCATGGAACAGTCGTC
TGAACTGTACAGACACGCGGAGACTGCCTTGGGGTCCTGGCCAGAAGACC
TGTTAATGCTCGAAGGAAATGTCAGATCTGCCTCCAGAATCACCCATCTC
GTCCCTCATACATTAAAAGAGAAGACGATGGTGTCTGTGAAGGAGGAAGG
GAAGGAGGGATCGTTTCATGCGGTGGTGCCTTACTTAACGGAGGATTTCG
TTTTGTTGATTGGGTTTGAGGAGAGGGTCAAAGATCGGGCGTGGCTGGAA
CCGTCCACGGGGGCATTAACTGTCAGCGTGGGTTTGGGCGAAGgtacgtg
agagatgcaccagagcctgatttcccctctgctgcccattgactgtctcg
tcttccgtgttttgtgggtgctccaagccgcccttaccagctttatcgtt
gtcgaatatctctagtccttagcacctaacccaccatctcctcctccctc
gttcccccttccttcacagACCAGCTCCCCGATACCGAAGAGAGCAAAGG
GGAATTCGTCTTCGTCATCGATCGTTCGGGCTCCATGGATGGGTCAAAGA
TTCAGCATGCGCGTGAGGCCCTCGCTCTGTGTATCTCCGCCCTACCTGAA
GGCAGTCGTTTTCAGATCCTCTCCTTTGGGAGCACCTTCGCCCCTCTCTT
CCCGGCTTCCACTCCTACCTCCTTCCCTCCCTCCCCCGTGGTCCAGCCAT
CTAATTTGACATCTGCTTTCACCACTGCTGCTGCTATGCCTGCTGCTGCC
ACTGCTGCTTTTGGGACTCCTGTTTTATTCACGGACGAGACCAAAAAAGT
TGCCTTGGAGCATTGTGCACAAATGGAAGCAAATATGGGAGGGACGGAGC
TCCTTGCTCCTCTCCGTGCATTGTCCACGCTTCCCCCTTCCCTCCCTCGT
CAGGTGTTCCTGATTACTGATGGTCAGGTGGGAAACACGGGAGAGGTGTT
GGGGTGGGTGAGGAGGGAGGGACGGAGGGAGGGTACGAGGTTCTTTGCGG
TTGGAATCGGAGGGGGGGTGAGTCGGGGCCTGGTGAAGGGAGTGGGAAGG
GAGGGGGGAGGGGAGAGTGTCTTTGTGGTGGACGGGGAGAGGATGCAGGG
GAAAATTATGCGGCAAATGAACAGGGCCGTGGGGCCGGCGGTTGGGGGGA
GCAGGGTGGAGGTGGAGGGAGGAAAGGAGGGAAGGGTTGTTGTCCTCTCA
GTGTCGCCCCGAAAACCTCGGCCTCTGTTTACCGGTGGTCGCCTTCTCTT
CTATGCTTTACTGGATCCTAATACTCTCGTTCAGAACAAAAAGACAAAGG
AGAAAGGAAACGAGGGGGAAGAAGGGTGGGTGGATGTCGGCGATGAGAAG
GAGGGCTGGAGGGAGGAAGGGCTGACTATCCGGGTAAGGGGCACCGGGCC
GGGAGGGGAGCAAGTGGTAATTCCAGTACCTCTTCAGATTGTCCCTCGGG
GTTTTGCGCCGTCGGGAATGCTGAGGGCCCTGGCCGTGAAATCAGTCCTG
AGCGACTTGGAGGAGGAGGTGGAGGGAGAGGGGGAAGGGAAGGAGAGGGC
AAAGACAGAGGCGGTGGCTCTGTCGGTCGCAAGTGGGGTTTTATGCAAGT
ACACTTCGTTTGTGGCTGTGGAAGAAGGGGGGGAGGGCGGGAGGTTCGGA
GGGTCTAAGCGAGTCTATCTTCCTCTGGCGTTCGTGACTCGGACAAATAT
GGGTCATGACCCATGGGGGCAAGGGAGAGGACGAGGAGGAGGTCGAGGAG
TAGGAAGAATGTTGAATTTTGCTGCTGCATCTTCGCCTATGATGGCCATG
GCGCAATGTCGTGGGTCGGCTCCAGTGATGATAAAGGAAGCTGCGCATGG
AGGGGTTAGGAGCGGTCGTTCTGATGTGGGGCATCGTGGTATGCCGCAAA
GGCTGGGAAAGATGGCGATGACAGCTTCATGTGACGTTTCCAGTGTTGCT
CCAGTTTCCTCCACGGTCGCTCGTGACGTCCCAGGCAATGGTGAAAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCAGAGGGTTGATCACGTGT
CGTTGGTGGCCCGGCAGAGGGCATCAGGTGCATGGGAGTGGGACGAAGAG
TTATTGTTCTCCATGCTTTTTGCAGAGGAGGGGAAGGGTGAGGAAAAAAG
AGAGCACGGGGAGGGAAAAAATGTCTTGAAGGAGCTCGAGGCACGGATGC
GTGTGATAAAGCGAAGGGACGGAAGGGCGGAGGAAGGGGAGGAGGAGGAG
CAGGAAGAGAAAAAGATGAAGAAGGAGAAGGATGTATGGGCCACAGCATT
GGTCTTGCTATACTTGGAGAAGAAATGGGGGAAGTATGAAGAAGAGTGGG
AGGTGGCGGAGAAGAAGGCAAAACGATGGTTGTTGCGCAGGATGGGAGGG
AGCGAGGAAGGGGTACAGGACGTGATGGAGAAGGCTGGGAAGGTCTTGGC
GGCGAAAGAATTTGTTTAACTAATAGGGTTTCGTTAAAAGAATGAGGAGG
GAGGCACTGAGGACAAGGAAAGAGTCAAGGGGAAGAGGGAAGCACCAGGG
GCCCCGTACGTGTCAAAAAAGGCAAGGAAAGGTCCAAAGAGGGGAGGGAA
GCAGTAGTTGATTGATGCTACACATTGAATGGAAGCAAGATGTAGATAGA
ATGCATGCATATGAATGAGATATGAGTGCTTGTGTCTGTCCGGGGGGCTG
AGATCGCTCTCCCTTTCGAATCACGGTGTATGACAACAGGGACGAAAGGA
CGAAATCAGTGTGTATAAAAAGTGGGAAACAACAATAAGAGGCGAAGCAG
CA
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protein sequence of NO13G02940.2

>NO13G02940.2-protein ID=NO13G02940.2-protein|Name=NO13G02940.2|organism=Nannochloropsis oceanica|type=polypeptide|length=772bp
MPSMEQSSELYRHAETALGSWPEDLLMLEGNVRSASRITHLVPHTLKEKT
MVSVKEEGKEGSFHAVVPYLTEDFVLLIGFEERVKDRAWLEPSTGALTVS
VGLGEDQLPDTEESKGEFVFVIDRSGSMDGSKIQHAREALALCISALPEG
SRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTSAFTTAAAMPAAAT
AAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPLRALSTLPPSLPRQ
VFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGGGVSRGLVKGVGRE
GGGESVFVVDGERMQGKIMRQMNRAVGPAVGGSRVEVEGGKEGRVVVLSV
SPRKPRPLFTGGRLLFYALLDPNTLVQNKKTKEKGNEGEEGWVDVGDEKE
GWREEGLTIRVRGTGPGGEQVVIPVPLQIVPRGFAPSGMLRALAVKSVLS
DLEEEVEGEGEGKERAKTEAVALSVASGVLCKYTSFVAVEEGGEGGRFGG
SKRVYLPLAFVTRTNMGHDPWGQGRGRGGGRGVGRMLNFAAASSPMMAMA
QCRGSAPVMIKEAAHGGVRSGRSDVGHRGMPQRLGKMAMTASCDVSSVAP
VSSTVARDVPGNGESSSSSSSSSSSSQRVDHVSLVARQRASGAWEWDEEL
LFSMLFAEEGKGEEKREHGEGKNVLKELEARMRVIKRRDGRAEEGEEEEQ
EEKKMKKEKDVWATALVLLYLEKKWGKYEEEWEVAEKKAKRWLLRRMGGS
EEGVQDVMEKAGKVLAAKEFV*
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protein sequence of NO13G02940.1

>NO13G02940.1-protein ID=NO13G02940.1-protein|Name=NO13G02940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=985bp
MTTVDIPDYDGAYQAKPDTPERFYLCTAFNFGLTCAAGRSVPLKRVNVKC
NVLDFLAEVSVEQTFQNDDPSTAVEVIYRFPLDAQAILTSFSTQKNEGPV
IHGKVTEKEEAKATYEEALACGQGGYLLHEEGELKDVFSLKVGNLQPGET
VNVKLTYVAQVDEEEEEEKEEKEEGEEAEGSKLPQKTTPKNKKNKKKSSS
LRLVIPTAVAPRYMPSMEQSSELYRHAETALGSWPEDLLMLEGNVRSASR
ITHLVPHTLKEKTMVSVKEEGKEGSFHAVVPYLTEDFVLLIGFEERVKDR
AWLEPSTGALTVSVGLGEDQLPDTEESKGEFVFVIDRSGSMDGSKIQHAR
EALALCISALPEGSRFQILSFGSTFAPLFPASTPTSFPPSPVVQPSNLTS
AFTTAAAMPAAATAAFGTPVLFTDETKKVALEHCAQMEANMGGTELLAPL
RALSTLPPSLPRQVFLITDGQVGNTGEVLGWVRREGRREGTRFFAVGIGG
GVSRGLVKGVGREGGGESVFVVDGERMQGKIMRQMNRAVGPAVGGSRVEV
EGGKEGRVVVLSVSPRKPRPLFTGGRLLFYALLDPNTLVQNKKTKEKGNE
GEEGWVDVGDEKEGWREEGLTIRVRGTGPGGEQVVIPVPLQIVPRGFAPS
GMLRALAVKSVLSDLEEEVEGEGEGKERAKTEAVALSVASGVLCKYTSFV
AVEEGGEGGRFGGSKRVYLPLAFVTRTNMGHDPWGQGRGRGGGRGVGRML
NFAAASSPMMAMAQCRGSAPVMIKEAAHGGVRSGRSDVGHRGMPQRLGKM
AMTASCDVSSVAPVSSTVARDVPGNGESSSSSSSSSSSSQRVDHVSLVAR
QRASGAWEWDEELLFSMLFAEEGKGEEKREHGEGKNVLKELEARMRVIKR
RDGRAEEGEEEEQEEKKMKKEKDVWATALVLLYLEKKWGKYEEEWEVAEK
KAKRWLLRRMGGSEEGVQDVMEKAGKVLAAKEFV*
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Synonyms
Publications