NO13G02780, NO13G02780 (gene) Nannochloropsis oceanica

Overview
NameNO13G02780
Unique NameNO13G02780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4794
Alignment locationchr13:769920..774713 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:769920..774713 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO13G02780 vs. NCBI_GenBank
Match: EWM21945.1 (hypothetical protein Naga_100157g14 [Nannochloropsis gaditana])

HSP 1 Score: 328.2 bits (840), Expect = 4.800e-86
Identity = 404/455 (88.79%), Postives = 419/455 (92.09%), Query Frame = 0
Query:   74 VAMAARSGEQDELSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDASKNAKQSLKFRSVEEIDAEMSRLNKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERARIQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDERNVFWKKKSEAITQIKAIREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFEEEMALCDYLSNYLKTTFLVEK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTHSPELLASFALLKLDAPSKKDGVEAAVVALKEKKEWFSVQPRPIKKKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAATKEFKRSDDDFPTLGATVAAPA 528
            VAMAARSGEQDELS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ASK+AK  +KFR+VEEI+AEM+RLNKLQSTTSM L EEKKLVKELESLR QKRQLSALGASEG IKNDK+ERAR+Q  LKAKRD   EC GRLTAQREVCD VQAKENGGEGGKKGLIPTLHD+RN  WKKKSEAITQIKA+REXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP+EEEMALCDYL NYLK  FL EK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L HSPELLASFALLKLDAPSK  GVEAAVVALKEKKEW+SVQPRP+KKK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     KEFKRS+DDFP+LGA +AAPA
Sbjct:  112 VAMAARSGEQDELSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKSAKSQMKFRTVEEINAEMARLNKLQSTTSMVLSEEKKLVKELESLRAQKRQLSALGASEGLIKNDKEERARLQASLKAKRDEVNECFGRLTAQREVCDKVQAKENGGEGGKKGLIPTLHDQRNAIWKKKSEAITQIKALREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEEMALCDYLVNYLKQNFLTEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLAHSPELLASFALLKLDAPSKATGVEAAVVALKEKKEWYSVQPRPVKKK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPKEFKRSEDDFPSLGAAMAAPA 565          
BLAST of NO13G02780 vs. NCBI_GenBank
Match: CBN78805.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 88.6 bits (218), Expect = 6.400e-14
Identity = 111/425 (26.12%), Postives = 169/425 (39.76%), Query Frame = 0
Query:   35 PDKRNLDKAVGALQAEIDKLNENIAGYDKKMEEIKKKIDVAMAARSGEQDELSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDASKNAKQSLKFRSVEEIDAEMSRLNKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERARIQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDERNVFWKKKSEAITQIKAIREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFEEEMALCDYLSNYLKTTFLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTHSPELLASFALLKLDAPSKKDGVEAAVVALKEKKEWFSVQPRPIKKKAEP 460
            PD    +  VGA+   I K+ ++I       E ++ KID A  AR G+ DE+ +                                      + +  + SLKF++V EI+    ++   Q T+SM+L EEKKL+KE+E L+  K+  +   + E  +K  KD     +     K+        +L A   V + + AK +   GG    +  L++++    ++ +  I +IK +R                                                   P+E E+ LCD L +YL+TTF+  K                                            XXXXXXXXXXXXXXXXXXX+ H+ + + SF++L +  P  K  V  A+ ALKEKK WF+ QPRP    A+P
Sbjct:   16 PDNDEHELQVGAINESIKKIKDDI-------EVLRAKIDEASEARRGQGDEMGEARAVMRALKEERDEIRSHLDTMQADSARAKAALEGHDKSRRALQSSLKFKTVGEIETPFRQMEAPQQTSSMSLAEEKKLIKEMEQLKTSKKTAAQFMSQEEMVKGAKDGYGAARKTESEKKAELRAVQEKLKAAFTVLEEMGAKRDEEGGG----VNALYEQKKALHEEINVKIEEIKDLRSAHRAKLDHWYNCRRERTKFKRALHKAEWLERVAAKNAHTKALEEEEAKKIPYESEIVLCDTLVSYLETTFMNVK-GEAPKAAAVVAPQAATNDEFKGMKMVMKKRQDEEFIVMGGGRKXXXXXXXXXXXXXXXXXXXIVHAIDTMESFSMLSIAPPPNKAAVPDAIKALKEKKAWFAEQPRPTATTAKP 428          
BLAST of NO13G02780 vs. NCBI_GenBank
Match: XP_002183698.1 (lipoprotein, type 6 [Phaeodactylum tricornutum CCAP 1055/1] >EEC44880.1 lipoprotein, type 6 [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 87.0 bits (214), Expect = 1.900e-13
Identity = 78/327 (23.85%), Postives = 128/327 (39.14%), Query Frame = 0
Query:  125 IDASKNAKQSLKFRSVEEIDAEMSRLNKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERARIQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDERNVFWKKKSEAITQIKAIREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFEEEMALCDYLSNYLKTTFLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTHSPELLASFALLKLDAPSKKDGVEAAVVALKEKKEWFSVQPR 452
            I   K+ +  +KF SVEEI+AE+++L + Q TTSM+L EEKK++KE+++LR  K+ ++AL + +G +   K+ER  I   + AK     E    +    +V   ++A  N  +  K+  +  L  ER+ +  K  E + +  A+R+                                                  P+EEE ALC++L+N+L+ T+L +                                                                 T S +    F LL L+ P+  + V  +V  L+EKKEW+  QPR
Sbjct:  133 IKDKKDTRSQVKFNSVEEIEAEIAKLMRQQETTSMSLNEEKKIIKEMDALRASKKHVAALKSKDGALDGVKEERKSIGQQITAKDKEIDEVSKDID---QVMTKIKAL-NETDSTKRDAVQGLIKERDEYKLKIGEKLKEKDALRDAYRLLNNKFYNFQRAIRAQKKIQYEEEKEARDAEKAAYLAKVEEEEAKKIPYEEEQALCEFLANFLERTYLSK----PGDEAKTASENKDVVAVKDDPFAGLKPVSKKDADEEYFGKGKAKKKRTRATKNQDTSSGPFTLSVDTFEQFGLLSLNPPTSSEQVAKSVQELREKKEWYKQQPR 451          
BLAST of NO13G02780 vs. NCBI_GenBank
Match: XP_009041899.1 (hypothetical protein AURANDRAFT_72721 [Aureococcus anophagefferens] >EGB03428.1 hypothetical protein AURANDRAFT_72721 [Aureococcus anophagefferens])

HSP 1 Score: 78.6 bits (192), Expect = 6.700e-11
Identity = 114/403 (28.29%), Postives = 171/403 (42.43%), Query Frame = 0
Query:   49 AEIDKLNENIAGYDKKMEEIKKKIDVAMAARSGEQDELSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDASKNAKQSLKFRSVEEIDAEMSRLNKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERARIQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDERNVFWKKKSEAITQIKAI----REXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFEEEMALCDYLSNYLKTTFLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTHSPELLASFALLKLDAPSKKDGVEAAVVALKEKKEWFS 448
            A+I  LN+ +  +++++ E+  KI  A ++   + +EL +                                    I A ++ +  LK+ S +EID  ++ L   QSTTSM+L EEK L+KE++ L+  K+ ++ L A+   I +++     I   L +K         ++  Q+E+ + +    N     ++ ++P L  +++   K K   +  IK++    R                    XXXXXXXXXXXXXXXXXXXXXXXXXX     PFEEEM LC YL+NYL+ T+  +                                                    XXXX        +   PE +  FALL L+ PS   GV  AV  L EKK WFS
Sbjct:   39 AKIVALNDEVQDFNERLSEVDAKIAEAKSSGGDQSEELREARTTMKSLRERKDTIMRDRAEIAALQKSAKASLDSKITAGRSLRAELKYTSPDEIDKRIAELEMRQSTTSMSLKEEKVLLKEIDQLKQSKKLVTHLAANNDSISSERKNSQTISEQLTSKNAELDVLKKKIEEQKEILETL----NEANSERRAVLPALFKDKDALRKDKQAKVDAIKSLRADFRSDVFNALAHLGAHQREVRRVXXXXXXXXXXXXXXXXXXXXXXXXXXELKRVPFEEEMELCSYLANYLEITYCKD----VQNPKSEADKPTAAGEFEGLVLSGKNAAKGHEEDYLSLNKATGKKKGRXXXXGGLKVHEKILLVPETIEIFALLGLEPPSTVSGVVDAVKRLTEKKLWFS 433          
BLAST of NO13G02780 vs. NCBI_GenBank
Match: OQR92714.1 (hypothetical protein ACHHYP_03340 [Achlya hypogyna])

HSP 1 Score: 70.1 bits (170), Expect = 2.400e-8
Identity = 59/236 (25.00%), Postives = 103/236 (43.64%), Query Frame = 0
Query:   35 PDKRNLDKAVGALQAEIDKLNENIAGYDKKMEEIKKKIDVAMAARSGEQDELSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDASKNAKQSLKFRSVEEIDAEMSRLNKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERARIQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDERNVFWKKKSEAITQIKAIRE 271
            PDK  LD A+  L+ E  K  + +     +++EIK+        RSG  +++                                       ++ K+ + SL F++V+EI+ ++ +L   Q T SM+L  EK L+KE+ESL+  K+ ++   A  G+          I+  +KAK             Q+ V DA++A     + G + L PTL +E+     +  E  T+I+A+R+
Sbjct:   14 PDKAVLDAAIETLEVEKKKSLDRMKAISTELDEIKE-------GRSGFSEKMKAAKVIYNELSEKKKQLHTERIQLKLDFDNSKKAKDNYRESQKSLQNSLPFKTVKEIEDKIRQLQTEQHTKSMSLTAEKNLIKEIESLQQAKKNVAKFAAQAGKDSEFNSSLDDIRAAMKAKSAEIDIVQEAFNKQKAVMDAIRA---DSDIGGRDLFPTLLEEKKGLKARVDEIFTEIRALRD 239          
BLAST of NO13G02780 vs. NCBI_GenBank
Match: OWZ17409.1 (hypothetical protein PHMEG_0008655 [Phytophthora megakarya])

HSP 1 Score: 68.6 bits (166), Expect = 6.900e-8
Identity = 59/219 (26.94%), Postives = 94/219 (42.92%), Query Frame = 0
Query:   40 LDKAVGALQA-------EIDKLNENIAGYDKKMEEIKKKIDVAMAARSGEQDELSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDASKNAKQSLKFRSVEEIDAEMSRLNKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERARIQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDER 252
            LD A+  LQA       E+D L  N  GY  +++E K     A AA   ++D+L +                                    +   ++A+ +LKF S  E DA +++L   Q T+SM+L EEK+++KE+E L+ QK+Q+SAL   +G ++   +     + L   K +       +L  Q+   D +       E  KK   P L  ER
Sbjct:   35 LDTAIKKLQARSNVVRSEMDALKTNRGGYGGQIQEAK----AAFAALRSQKDDLIQ-----------------QRNQITARLRQTRDEKDSTLKTQRSARATLKFGSESEFDAAIAQLKHQQETSSMSLNEEKRVIKEIEQLQAQKQQVSALSGDQGVVERQNESIKETRALQTQKNEQIDAVQEKLNQQKAALDELYRLNE--EENKKDQFPVLAKER 230          
BLAST of NO13G02780 vs. NCBI_GenBank
Match: XP_012204809.1 (hypothetical protein SPRG_10363 [Saprolegnia parasitica CBS 223.65] >KDO24548.1 hypothetical protein SPRG_10363 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 68.2 bits (165), Expect = 9.000e-8
Identity = 58/236 (24.58%), Postives = 102/236 (43.22%), Query Frame = 0
Query:   35 PDKRNLDKAVGALQAEIDKLNENIAGYDKKMEEIKKKIDVAMAARSGEQDELSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDASKNAKQSLKFRSVEEIDAEMSRLNKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERARIQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDERNVFWKKKSEAITQIKAIRE 271
            PDK  LD AV AL+ E     + +     +++EIK+        RSG  +++                                       ++ K+    L F++V+EI+  + +L   Q T SM+L  EK L+KE+ESL+  K+ ++   A +G+  +       I+  +KAK             Q+ V DA++A     + G + L PTL +E+     +  E  ++I+A+R+
Sbjct:   20 PDKAVLDAAVAALEVEKKTKLDRMKAISHELDEIKE-------GRSGFSEKMKAAKVIYNELSEKKKQLHTERNQLKIDFEKAKGAKDNYRESQKSLSNQLPFKTVKEIEDRIRQLETDQHTKSMSLTAEKNLIKEIESLQLAKKNVAKFAAQQGKDADFNASMDDIRAAMKAKSAEIEAVTEDFNKQKAVMDAIRA---DSDVGGRDLFPTLLEEKKSLKARVDEVFSEIRALRD 245          
BLAST of NO13G02780 vs. NCBI_GenBank
Match: XP_008613082.1 (hypothetical protein SDRG_08956 [Saprolegnia diclina VS20] >EQC33442.1 hypothetical protein SDRG_08956 [Saprolegnia diclina VS20])

HSP 1 Score: 67.4 bits (163), Expect = 1.500e-7
Identity = 57/236 (24.15%), Postives = 103/236 (43.64%), Query Frame = 0
Query:   35 PDKRNLDKAVGALQAEIDKLNENIAGYDKKMEEIKKKIDVAMAARSGEQDELSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDASKNAKQSLKFRSVEEIDAEMSRLNKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERARIQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDERNVFWKKKSEAITQIKAIRE 271
            PDK  LD AV AL+ E     + +     +++EIK+        RSG  +++                                       ++ K+ +  L +++V+EI+  + +L   Q T SM+L  EK L+KE+ESL+  K+ ++   A +G+  +       I+  +KAK             Q+ V DA++A     + G + L PTL +E+     +  E  ++I+A+R+
Sbjct:   42 PDKAVLDAAVAALEVEKKTKLDRMKAISHELDEIKE-------GRSGFSEKMKAAKVIYNELSEKKKQLHTERNQLKIDFEKAKGAKDNYRESQKSLQSQLPYKTVKEIEDRIRQLETDQHTKSMSLTAEKNLIKEIESLQLAKKSVAKFAAQQGKDADFNASMDDIRAAMKAKSAEIEAVTEDFNKQKAVMDAIRA---DSDVGGRDLFPTLLEEKKGLKSRVDEVFSEIRALRD 267          
BLAST of NO13G02780 vs. NCBI_GenBank
Match: XP_009840729.1 (hypothetical protein H257_14569 [Aphanomyces astaci] >ETV69715.1 hypothetical protein H257_14569 [Aphanomyces astaci])

HSP 1 Score: 67.0 bits (162), Expect = 2.000e-7
Identity = 46/149 (30.87%), Postives = 78/149 (52.35%), Query Frame = 0
Query:  126 DASKNAKQSLKFRSVEEIDAEMSRLNKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERAR-------IQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDERNVFWKKKSEAITQIKA 268
            ++ K+ +  + ++SVE++D  ++ L   Q+T SM+L  EK L+KE+E+L+  K+ L+   A       DKD  A+       I+  +KAK +  T       AQ+ + DA++ + N    G +G  P L +ER     +  +  TQIKA
Sbjct:  114 ESQKSVRDQVSYKSVEDVDKRIAELQHDQNTKSMSLTAEKNLLKEIENLKAAKKVLAKASA-------DKDNGAKFDVSIDDIRAAMKAKSEEITAVTEAFNAQKAILDALRDESN---AGGRGDYPKLIEERKALKLEIDDIFTQIKA 252          
BLAST of NO13G02780 vs. NCBI_GenBank
Match: OQR96299.1 (hypothetical protein THRCLA_07326 [Thraustotheca clavata])

HSP 1 Score: 64.7 bits (156), Expect = 9.900e-7
Identity = 82/218 (37.61%), Postives = 124/218 (56.88%), Query Frame = 0
Query:  126 DASKNAKQSLKFRSVEEIDAEMSRLNKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERARIQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDERNVFWKKKSEAITQIKAIREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFEEEMALCDYLSNYLKTTFLVE 344
            ++ KN +  L +++ +EID ++ +L   Q+T SM+L  EK L+KE+E+L+  K+ ++   A +G+          I+  +K K     +      AQ+ V DA++++    + G +   P L +E+     +  E   +I+A+R+                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P+++EM LC  L  YL+ TF  E
Sbjct:   99 ESQKNLQSQLPYKTTKEIDDKIRQLQHEQNTKSMSLNAEKNLIKEIENLQQAKKSVAKYAAEQGKDVQFNASMDDIRAAMKVKSAEIEKVTEAFNAQKAVMDAIRSE---SDVGGRDQFPKLLEEKKGLKARVDEVFNEIRALRDQFKKDNDKYYEAVRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPYQDEMDLCQALVVYLEKTFAKE 313          
The following BLAST results are available for this feature:
BLAST of NO13G02780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 10
Match NameE-valueIdentityDescription
EWM21945.14.800e-8688.79hypothetical protein Naga_100157g14 [Nannochlorops... [more]
CBN78805.16.400e-1426.12conserved unknown protein [Ectocarpus siliculosus][more]
XP_002183698.11.900e-1323.85lipoprotein, type 6 [Phaeodactylum tricornutum CCA... [more]
XP_009041899.16.700e-1128.29hypothetical protein AURANDRAFT_72721 [Aureococcus... [more]
OQR92714.12.400e-825.00hypothetical protein ACHHYP_03340 [Achlya hypogyna... [more]
OWZ17409.16.900e-826.94hypothetical protein PHMEG_0008655 [Phytophthora m... [more]
XP_012204809.19.000e-824.58hypothetical protein SPRG_10363 [Saprolegnia paras... [more]
XP_008613082.11.500e-724.15hypothetical protein SDRG_08956 [Saprolegnia dicli... [more]
XP_009840729.12.000e-730.87hypothetical protein H257_14569 [Aphanomyces astac... [more]
OQR96299.19.900e-737.61hypothetical protein THRCLA_07326 [Thraustotheca c... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001616NSK001616Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02780.1NO13G02780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|250417gene_9034Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100157g14gene8493Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02780.1NO13G02780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02780 ID=NO13G02780|Name=NO13G02780|organism=Nannochloropsis oceanica|type=gene|length=4794bp
GCTGCTGCTGCTGCTGCTGCTGCTCTTGCTGCTGCTGCGGGTGTTGGGGA
AGGATGTGACGAGAATGAAGACGCGTGCCAGTGCGAGAAACACCAGTACC
AGCAGCGCTACTGCCGCCAGCTGCTGATCCTGATGCGGTAGGAGCTGTAG
CATATGATTGTGTCTGGGATGCTGCTCCTGCTAGTGCTGGTGTTGGTGCT
GCAAGGGAGTACGCATTTGCGTAGCTTGTCGCACAGACACCGCAATAGAA
AGCTCGAGAGGGGTTGTCACTGTTTATGGCGCTGCGTTGCCATCGACGCA
AGCAACGCAAGTGGATATATGATTGGGTGCCCGAGCACCTACGAGGAAGA
GGGGAGGGAGGGAGGGAGGGAGGGAGAAAGAGAGAGGGAGATAGGTTAGG
TGAATGTCTTGCTTAATAATACAGAGCTCATGCTTTTGCTTTGCCTTCCC
ATCCCTCTCTCTTCTCCTTTCGGTCTTGCAACCTGCAAGGCGAGATGAAC
GTCTCGGGCTTTGTAGGTTCCAAGCAGATGCGGCAAATTTTCTTCTTTGG
ACTGCTGCTGCTGCTTGTCGACTGAGGAGAATTTGGAGGGATGGACGGAA
GAGGTGCAGACGCACGCGCGAAAACAGAGGTCAGCATTGTTCTATTGTAG
GAGGAGGAGAAGGAGGGAGCAGGTGATGTCGTAGTTGGTGCTGAGGTAGG
AGAAGAAAGTAACGACGACGTGCCGAGCGAGGAGATGAGCGACAAAGAAC
TGGAAAATTAGGCCCAAGGCCACAGCGGAAGAAGAAGACCGTACTCAGGA
CACGTAGAGAGAAGCTATCGCTCCAGCGTGATCTAGTCCTGTGCGTGTGG
GGGGGAAGTGGGAGGGTAGCAGGAAGAAGTTGAAATGAGGTGTCATAGCC
TTCGCAGCAAACTTGTTTCAAGAATTTTATTGCTTCCCTGCATTGTGACA
TTGGCTATCTCCATACAACCCACGGTCCACCCTCCTTATTTTCTCTTTGG
ACATTATCCAACCTGGCATCACAATGCCAAAAGAAGGGGGTTCGGTTTTA
GGCGATGACATGGCTACTGTGAGAGAACATGCGCCCTTTGTCCATCGCAG
TGCAGGTCCCAAGTCTCATCCTGCTTGTAGCCTTGTCCGTGCCCCCCTCG
CTTGAAACCGGGCTATTGACCTCGTTTTCCCTTCTTGTCCTGTGAAGCCA
ACCACCACATACACGTACGATTTGCGGTGCACACCCCCCTCCGCCTTAAC
ATGGTGGCGCAGGAGGCGTTGCACTCTGTGAGCGTTGCTGCACGTAAGGT
AACAGATGCATGTCCCCACCCCCCAAGACGACTCGCCAGGGCCACAAAAC
TTCCTTTTCTCTCCCCACCATCGTTCTTTCCTTCTCCATCCGCCAGGCCA
ATCCGCTTGAGGCTGCTCAGTCTTACACACTCAGCCAAGCATTTCATTCC
AAACTTATTCACAGCGAGTCCACGAATTGGTAGAGGCAGAAACGTAGAAG
CACGTCCTCGAGTGTGGAGCTTGCGGTTCTCGCAAGCCCTCACCACTTCT
CGTCTCGGAACTCCATCGTCATCTCGTCATCCACCACCCACAACATAAAA
CACCACAGAGAGAGCGTTGCACGCCAGCCGCAACAGTAGCAGCATGACCA
ATTCTACTGAAGCCACGGAGGTCTCCCCTCCGGCCGCCGAGGCTGCGGAG
GAGAGCAAGCCCAAGgtatgtatatgtgaccgcgtgttgagagccccgct
tcttccacaccgctccttcgattccattccaatcagcaaatgtctcctta
ttcttgtgcgtcaatgccacagtatttctccttgctatcaactacctgac
aatgcttcaagttcttgcctcctctatctcaccctccctccacccgtcca
tccctccctgcctccacctcttcatcagGCTCCCAAGGCCCTCCCCGCCG
GCCCCCGCCCCGACAAGCGCAATCTCGACAAGGCCGTAGGTGCCCTGCAA
GCCGAGATCGACAAGCTGAACGAGAACATTGCGGGGTATGATAAAAAGAT
GGAGGAAATCAAGAAGAAGATTGACGTGGCCATGGCCGCACGGTCTGGAG
AACAGGACGAGTTATCCAAGGAAAGGGCGAAACGTGACGCCATCAAGGCG
GAGCTCGACAAGATCAAGGCGGAGAAGgttagtgagcaataaagaaatta
gcagaggagaggtgcaacatgtcgatctcgaaagcatcccacagtacagt
gttgcctacctttttccccgttcgttccttccccgccctcccttcctcct
tctccagGACACCCTCTCGGCTGAGTTCGACCGAGTCAAGGGGAAGGTGG
ACACGGCCATCGACGCAAGCAAGAACGCGAAGCAAAGCTTGAAGTTTCGA
TCTGTCGAGGAGATTGACGCGGAGATGAGCCGCCTGAACAAGCTTCAGAG
CACCACGTCCATGACTTTGGGCGAGGAGAAGAAGCTGGTCAAGGAGCTGG
AGAGCCTCCGCGGGCAGAAGCGACAGCTGTCTGCGTTAGGGGCGTCGGAG
GGACAGATCAAGAACGATAAGGACGAAAGGGCGCGGATCCAGGGGCTGTT
GAAGGCGAAAAGAGACGCCTTCACCGAGTGCCTGGGGCGGCTGACTGCGC
AGAGGGAGGTGTGTGATGCGGTGCAGGCGAAGGAGAATGGCGGCGAGGGG
GGAAAGAAGGGTCTAATCCCCACATTACATGATGAAAGGAACGTATTCTG
GAAAAAGAAGTCGGAGGCTATCACCCAGATCAAGGCGATTCGTGAGCAGG
TTAAGGGAAAGTGGGATGAGTTCAAGGCGGCGAGGAAGGAGTGGGAGGCG
TTCATGGATGAGGAGAGGAAGGTGAGGGAAGCGGAGCGGAAAGCCCAGAA
GGAGGAATGGGAGAGGAAGCGAGAGGAGGAGGAGGCCAAGAAAATTCCGT
TTGAGGAGGAAATGGCTCTGTGCGACTACCTATCAAATTACTTGAAGACT
ACCTTTTTAGTCGAGAAGGAGACAGCCACCGCGGCGGTTGCAGCAGCTGC
GGTGGCGGCGGCGGCGGGGCCGGCGGCGGCTTTTGAGCATGATGGGATGA
CATTACAGGCTTTCAGGAGAGAGGATGAGGAGGAGGAGCGGTGGGTGGGG
GGCGGGAAGAAGAAGAAGGAGAAGAAGCCTGAGGGGGGGAAGAAGAAAAA
CAGCTCCTTGACACACTCTCCGGAGCTGCTGGCGTCGTTTGCGCTTCTGA
AACTTGACGCACCGAGTAAGAAGGACGGGGTTGAGGCGGCGGTGGTGGCA
CTGAAGGAGAAGAAAGAGTGGTTCTCAGTCCAGCCCCGCCCGATCAAGAA
GAAGGCGGAGCCCAAGGAAAAGGAGGAAGGGGAGGAGGGCATGGGGGAAA
ACGGAGAGGCGGATCCGGTTGCTGGGGAGGAGGGTGGAAATGCCGGAAAC
AGTAAGGGAGGGAAGGGAAAGGGGGGGAGAGGTGGGGAGAAGAAGGCGGC
GACTAAGGAATTTAAACGATCGGATGACGATTTCCCCACGTTGGGCGCTA
CGGTGGCGGCCCCAGCGGCTAAAGCCGAGGCGTAAAAAGGGGAGAGAGAT
ATTTTAAAATAGTTGGAGGGAACGAACGAGTGAAGATAATTTGGCTTGTC
ACGCATGCATGCGATAAGGTGGTAAGATCGATCGGGAAAGGAGACAGGGA
ATGGATGGTAGCAAGGCTTTGAGTGAGGTAACAAATGATGAAGAAAGAAA
GGAGGGATTTATAGGTAGAGCACAAATCGAGACGTCAGATAGGGTGGAGG
AAGAAATTGCGCGCGTGTGATAGTGAGAGAGTGAAATACACAGGCAATCG
TAGGCCATGATCAAAAAGGCCGACAGTCGACCCGCATTACATTCTTAATT
ATTATTATTCATTATTTTTCTATTTTATTTTTATTTTATTAATTTCATTG
TAATGACAACGGCGGAGAGAGTGCAGGGAAAGAAAGAGAGGTACGCAGTC
TGTTCAAAATCCTGATAGTTGGAGGACGAGGGAAAGTGGGAAAGAAGGAG
GTCTTGAAGCCGCCTCAGCAGGTTGGAAAATTTTCATGTGGGAGAAAAAT
AAGTAGAGTTCAGTAATGAGTAGCAAGAGAAGAAGGAAAGTAGATGGATG
AGGATGAGCAGGAGTGACAGCAGCAGGAGCAGCAGGTTAAGGAGGAGGAG
GAGGAGGAGGAGGAAAGGAAGGTGGGAGAAGAGCAGGGGTAGCATTAATG
CTGACAGCAGCACGTCACTTAGGATGGAGCAGCGGTAGTAGCAGAAGCAG
AAGTAGGAGCAGGGACAGGAGCAGGAGCCGGGGCAGCAGTATCAGTATCG
TGACTTCCTGGTCACGGCGGGAGTGAGCAAGCGAGGGGGGATGCGAGGAT
GAGGTGGCTTTTTGATCCTTGAGGGTAGATAGGAAAGGTAGAGAAACGAA
GACCATCATTTGTTACCACCACAACAGGAAGGAGAAATAATCAGAGGAAA
TAAAGGGATGAGGGCTTAGCATGGGCTTGTCCTCATTCTTCTATGATTCA
CTCAGCTGTCTCACGGCGCGGAAGGAAGGAAGGAGAAGGGGGAAAGATGA
TCCACAAAACTCTTCAGGAAGAGAGTGATGGAAAGGACAAGGATCAGGAA
GAGAGTGACGGAAAGGACAAGGATGGCTGATCGACAACCATAACATGAGC
AGCAACAACACACAAAACAAAAAGGAAATTTCGACGCTAAGAAATGAGGT
TGAAGGAAAGTGAAGGAAAAGGAGTCGCAGCCACGAAAGAACGT
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protein sequence of NO13G02780.1

>NO13G02780.1-protein ID=NO13G02780.1-protein|Name=NO13G02780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=533bp
MTNSTEATEVSPPAAEAAEESKPKAPKALPAGPRPDKRNLDKAVGALQAE
IDKLNENIAGYDKKMEEIKKKIDVAMAARSGEQDELSKERAKRDAIKAEL
DKIKAEKDTLSAEFDRVKGKVDTAIDASKNAKQSLKFRSVEEIDAEMSRL
NKLQSTTSMTLGEEKKLVKELESLRGQKRQLSALGASEGQIKNDKDERAR
IQGLLKAKRDAFTECLGRLTAQREVCDAVQAKENGGEGGKKGLIPTLHDE
RNVFWKKKSEAITQIKAIREQVKGKWDEFKAARKEWEAFMDEERKVREAE
RKAQKEEWERKREEEEAKKIPFEEEMALCDYLSNYLKTTFLVEKETATAA
VAAAAVAAAAGPAAAFEHDGMTLQAFRREDEEEERWVGGGKKKKEKKPEG
GKKKNSSLTHSPELLASFALLKLDAPSKKDGVEAAVVALKEKKEWFSVQP
RPIKKKAEPKEKEEGEEGMGENGEADPVAGEEGGNAGNSKGGKGKGGRGG
EKKAATKEFKRSDDDFPTLGATVAAPAAKAEA*
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Synonyms
Publications