NO13G02320, NO13G02320 (gene) Nannochloropsis oceanica

Overview
NameNO13G02320
Unique NameNO13G02320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3065
Alignment locationchr13:642281..645345 +

Link to JBrowse

Properties
Property NameValue
DescriptionLysine-specific demethylase 4c isoform 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:642281..645345 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
IPR003349JmjN
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO13G02320 vs. NCBI_GenBank
Match: EWM21898.1 (lysine-specific demethylase 4c isoform 1 [Nannochloropsis gaditana])

HSP 1 Score: 930.6 bits (2404), Expect = 3.700e-267
Identity = 487/794 (61.34%), Postives = 563/794 (70.91%), Query Frame = 0
Query:    1 MSKTSCPVFRPTMDEFKNFSAYIDKIDSKIGDAGLCKIIPPEGWYTPPTEAELEEMLEERQLLIPPIKQCVSGLRGVYQLGLMDSKKLSVRDFRALAHKNEPDYETSYEERERLFWRSMGPVTPPPLYGADMSGSLFRDGASGWNLAELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPASQKRFESMAQSLDPQGFRGCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEYVITFPASYHAGFNHGFNVAEATNFTTERWLSKGREAKVCRCQPYSVHINMDDFAAKLEAKRAADRAKVEALPSKTGKIERKRILKRLGHTGWLAWHEQEEDARVQEXXXXXXXXXXXXXXXXXXXXXAKLRELQEGTYDPAVGAKRRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAEQELWDFRCSCGEICSSETPVANWPKGAMFQCTGCLTWSHTRCLYSKDVAPRKAFCAGCHQVLKTLEGLGANWHTGRQIDVRSRVVVCRGPRGLDEGTVTMLGEGMARVYFKGLRQPKKKRKGGRRVAGELEDVRPTKEQAAPVEEWINITSNRFLSRERIKTALAAFNFQSAEARESGVRLEMRKKARLEQQRLQCEEQGHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMC----VTFSASDRGTMGRXXXXXXXXXXXXLAGGFAYPSSLMRGVPLPNADAAVRHAKFQKDLARSKKAFRGLFSRTQKVESALAGGYQPYRGPQGQEISVFDGKWSD 791
            MS T+CPVFRP+ +EFKNFSAYIDKIDS++G+AGLCKIIPPEGWY  PTEAE E M  ER L++PPIKQCVSGLRGVYQLGLMD KK++V+DF+ALA K EPD   SY E ERLFWRSMGP+ PPPLYGADMSGSLFRD ASGWNL+ELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPP +Q+RFES+AQSL+PQGFR CSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGE+V+TFPASYHAGFNHGFN+AEATNF+TERWLSKGREAKVCRCQPYSVHINMDDFAAKL AKRAAD+A+VEALP+KT KI+RK+IL+RL + GW+AW EQEE+AR  E                      K+R L  GT    VG        XXXXXXXX                              LA Q+ WDFRC CG   +S  PV +WPKGA+FQC GCL WSHTRCLYSKD APR+AFCAGCHQVL+ LE  GA+W TGR+I +RS+VVVCRGPRGL+EG+VTM+GEGMARVYFKG+++P+K+ + G    GE       K    P+EEW+N+ S+RFLSRER++ AL  F+ QS   ++  +  E  K    + Q+++  EQG Y                               G C    V  ++S RG+                 G   +P+ L+RGVPLP+A AAVRHAKFQKDLARSKKAFR LFS T+  E+     Y  Y        S+FDG+WSD
Sbjct:    1 MSSTTCPVFRPSREEFKNFSAYIDKIDSRVGNAGLCKIIPPEGWYDTPTEAEFEGMWAERGLVVPPIKQCVSGLRGVYQLGLMDGKKMAVKDFQALAKKTEPDQAMSYSEIERLFWRSMGPLAPPPLYGADMSGSLFRDRASGWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEFVVTFPASYHAGFNHGFNIAEATNFSTERWLSKGREAKVCRCQPYSVHINMDDFAAKLAAKRAADQARVEALPNKTSKIDRKKILRRLSYIGWMAWREQEEEARRVEEALAVKERQRLQREQTNLRRKEKVRRLNGGTLSLTVG-------EXXXXXXXXSAEDSEERVGGDEGEDEEDGGPARQGLEVDLAAQKQWDFRCRCGVAATSGAPVQSWPKGAIFQCAGCLAWSHTRCLYSKDHAPRRAFCAGCHQVLQRLEASGADWPTGRRIKLRSKVVVCRGPRGLEEGSVTMIGEGMARVYFKGMKKPRKRDRAG--APGETW----PKALKRPMEEWVNVMSSRFLSRERVQAALGQFSLQSIPTQDCAIS-ESIKMQTPQPQKIKL-EQGLY----------------------HHGDVATSAGHCCRDQVISASSLRGS------GAAQPPANTKRGMAPHPAPLLRGVPLPDAQAAVRHAKFQKDLARSKKAFRSLFSPTRNAEAVPGVSYSRYHA--AHNASIFDGEWSD 749          
BLAST of NO13G02320 vs. NCBI_GenBank
Match: PRP83144.1 (jumonji domain containing protein [Planoprotostelium fungivorum])

HSP 1 Score: 320.5 bits (820), Expect = 1.700e-83
Identity = 164/317 (51.74%), Postives = 211/317 (66.56%), Query Frame = 0
Query:    7 PVFRPTMDEFKNFSAYIDKIDSKIGDAGLCKIIPPEGWYTPPTEAELEEMLEERQLLIP-PIKQCVSGLRGVYQLGLMDSKKLSVRDFRALAHKNEPDYETSYEER---ERLFWRSMGPVTPPPLYGADMSGSL---FRDGASGWNLAELDNMIKLL--PSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPASQKRFESMAQSLDPQGFRGCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEYVITFPASYHAGFNHGFNVAEATNFTTERWLSKGREAKVCRCQPYSVHINMDDFAA 315
            PVF PTM+EFK+F+ Y++ I SK  + G+CKIIPP  W  P   +E      E  L+IP PIKQ VSG +GVYQL L++   +++  F   A K++    + Y+E    +R FW+++      P+YGADMSGSL   F++    WN   L +++ +L    NLPGITT  LYFGMW+AMFA+H EDMNL+SINYLH G PKSWYS+ P    R E +AQSL P+ +RGC EFLRHKTS+ SP +L ++ IP   +VQE GE+VITFP SYH GFNHGFN AEA NF TE W+  GR+AK C CQ  +  I+MD F A
Sbjct:   12 PVFTPTMEEFKDFAKYVESIQSKCVN-GICKIIPPPEWGQPFDYSEYIGENAEGDLIIPCPIKQIVSGNKGVYQLLLVEQPNMTLSKFATNADKHKRTKASKYQENDSVDRSFWKNV--KFDYPMYGADMSGSLFKSFKNPPEVWNPNSLPSILNVLGATQNLPGITTPYLYFGMWKAMFAWHVEDMNLFSINYLHFGEPKSWYSVAPEHGPRLERLAQSLFPEQYRGCPEFLRHKTSLISPSILAQNKIPVTKVVQEVGEFVITFPYSYHCGFNHGFNCAEAVNFATESWIEWGRKAKFCTCQSDTAQIDMDSFEA 325          
BLAST of NO13G02320 vs. NCBI_GenBank
Match: CCI43005.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 318.5 bits (815), Expect = 6.600e-83
Identity = 153/324 (47.22%), Postives = 215/324 (66.36%), Query Frame = 0
Query:    4 TSCPVFRPTMDEFKNFSAYI-DKIDSKIGDAGLCKIIPPEGWYTPPTEAELEEMLEERQLLIPPIKQCVSGLRGVYQLGLMDSKKLSVRDFRALAHK---NEPDYETSYEERERLFWRSMGPVTPPPLYGADMSGSLFRDGA-SGWNLAELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPASQKRFESMAQSLDPQGFRGCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEYVITFPASYHAGFNHGFNVAEATNFTTERWLSKGREAKVCRCQPYSVHINMDDFAAKLEAKRAA 323
            T CPVF P+ ++F +FS+YI ++I+ K    G+CKI+PP+GW+    + +++ ++E       P+ Q V+G +GV+ + L++ K L+ ++F+ +A +    EP   +  +E ER FW++M     PP+YGAD+ GSLF   + S WNL EL  +  L    LPG+T +MLYFGMWRAMFAFHTEDM+LYSINYLH G+PK WY IPP +   FE  AQ++ P+ +  C +FLRHK S+ SP  L+  GIP +  +Q  GE+VITFP +YH+GFN GFN+AEA NF T RW+  G  A+VC+C P SV I+MDDF   L +   A
Sbjct:   10 TICPVFYPSQEQFTSFSSYIREEIEPKCSHIGICKIVPPKGWFIRNYD-DIDYVVEH------PVSQHVAGKKGVFNIDLVERKSLTAQEFKEIAAQCTDGEPQDLSKMDEIERAFWKNMRSTMDPPIYGADIEGSLFDSSSNSTWNLNELKTI--LCRIELPGVTRSMLYFGMWRAMFAFHTEDMDLYSINYLHHGKPKFWYCIPPHAASTFERAAQAIYPEKYHSCHQFLRHKNSMISPNQLKAFGIPVYKTLQSEGEFVITFPTAYHSGFNLGFNIAEAVNFATLRWIPFGLRARVCKCSPESVRIDMDDFLTSLFSSEIA 324          
BLAST of NO13G02320 vs. NCBI_GenBank
Match: CCA18657.1 (hypothetical protein TRIADDRAFT_27796 [Albugo laibachii Nc14])

HSP 1 Score: 315.1 bits (806), Expect = 7.300e-82
Identity = 154/333 (46.25%), Postives = 219/333 (65.77%), Query Frame = 0
Query:    4 TSCPVFRPTMDEFKNFSAYI-DKIDSKIGDAGLCKIIPPEGWYTPPTEAELEEMLEERQLLIPPIKQCVSGLRGVYQLGLMDSKKLSVRDFRALAHK---NEPDYETSYEERERLFWRSMGPVTPPPLYGADMSGSLFRDGA-SGWNLAELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPASQKRFESMAQSLDPQGFRGCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEYVITFPASYHAGFNHGFNVAEATNFTTERWLSKGREAKVCRCQPYSVHINMDDFAAKLEAKRAADRAKVEALP 332
            T+CPVF P+ ++F +FS+YI  +++ K  D G+CKI+PP+GW+    + +++ ++E       P+ Q V+G +GV+ + L++ K L+ ++F+ +A +    EP      +E ER FW+SM      P+YGAD+ GSLF     S WNL +L  +  L    LPG+T +MLYFGMWRAMFAFHTEDM+LYSINYLH G+PK WY IPP +   FE  AQ++ P+ +  C +FLRHK S+ SP  L+  GIP +  +Q  GE+VITFP +YH+GFN GFN+AEA NF T RW+  G  A+VC+C P SV I+MDDF   L    ++ +AK + +P
Sbjct:   10 TNCPVFYPSQEQFTSFSSYIRQEVEPKCSDIGICKIVPPKGWFIRNYD-DVDFVVEH------PVSQHVAGKKGVFNIDLVEKKSLTAQEFKEIAAQCSDGEPRDLFKMDEIERAFWKSMRSTMDAPIYGADIEGSLFDSSCNSTWNLNDLKTI--LCRIELPGVTRSMLYFGMWRAMFAFHTEDMDLYSINYLHHGKPKFWYCIPPHAASAFERAAQAMYPEKYHSCHQFLRHKNSMISPNQLKAFGIPVYKTLQSEGEFVITFPTAYHSGFNLGFNIAEAVNFATLRWVPFGLRARVCKCSPESVRIDMDDFLISL---FSSGKAKSDDIP 330          
BLAST of NO13G02320 vs. NCBI_GenBank
Match: XP_024581064.1 (DNA damage-responsive repressor GIS1/RPH1, jumonji superfamily [Plasmopara halstedii] >CEG44695.1 DNA damage-responsive repressor GIS1/RPH1, jumonji superfamily [Plasmopara halstedii])

HSP 1 Score: 313.2 bits (801), Expect = 2.800e-81
Identity = 145/316 (45.89%), Postives = 211/316 (66.77%), Query Frame = 0
Query:    6 CPVFRPTMDEFKNFSAYI-DKIDSKIGDAGLCKIIPPEGWYTPPTEAELEEMLEERQLLIPPIKQCVSGLRGVYQLGLMDSKKLSVRDFRA---LAHKNEPDYETSYEERERLFWRSMGPVTPPPLYGADMSGSLFRDG-ASGWNLAELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPASQKRFESMAQSLDPQGFRGCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEYVITFPASYHAGFNHGFNVAEATNFTTERWLSKGREAKVCRCQPYSVHINMDDFAAKL 317
            CPV+ PT  EF++F+ YI   ++ +  + G+CK+IPP GW+     +   ++ + +  +  P+ Q V+G +G++ + L++ K +S  +F A   +A+  EP       + ER FW+ +     PP+YGAD+  SLF D  A  WNL +L+ +++ +  +LPG+T +MLYFGMWRAMFAFHTEDM+LYSINYLH G+PK WY +PP +  + E  AQS+ P+ +  C++FLRHKTS+ SP  L+E G+PF    Q+PGE+VITFPA+YH GFN GFN+AEA NF T  W+  G +AK+C+C P SV I+MD F  +L
Sbjct:   17 CPVYYPTHTEFQSFATYIRTVVEPQCANIGICKVIPPSGWF-----SRSYDISQLKCQVKAPVCQHVAGKKGIFNVDLVERKSMSPEEFHAVANVANNQEPKDNDDLLDVERRFWKGLRGTMDPPIYGADIVASLFGDADALSWNLNDLNTILRTI--DLPGVTQSMLYFGMWRAMFAFHTEDMDLYSINYLHTGKPKFWYGVPPHAATQLERAAQSMFPEKYHECTQFLRHKTSLISPARLKEFGVPFFRACQKPGEFVITFPATYHQGFNFGFNIAEAVNFATLHWIPYGLKAKICKCHPDSVRIDMDSFLMRL 325          
BLAST of NO13G02320 vs. NCBI_GenBank
Match: XP_008607938.1 (hypothetical protein SDRG_04063 [Saprolegnia diclina VS20] >EQC38346.1 hypothetical protein SDRG_04063 [Saprolegnia diclina VS20])

HSP 1 Score: 309.7 bits (792), Expect = 3.100e-80
Identity = 155/332 (46.69%), Postives = 210/332 (63.25%), Query Frame = 0
Query:    2 SKTSCPVFRPTMDEFKNFSAYI-DKIDSKIGDAGLCKIIPPEGWYTPPTEAELEEMLEERQLLIPPIKQCVSGLRGVYQLGLMDSKKLSVRDFRALA-HKNEPDYETSYEERERLFWRSMGPVTPPPLYGADMSGSLFRDGA--SGWNLAELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPASQKRFESMAQSLDPQGFRGCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEYVITFPASYHAGFNHGFNVAEATNFTTERWLSKGREAKVCRCQPYSVHINMDDFAAKLEAKRAADRAKVEA 330
            S    PVFRPT  EF +F  YI   ++ +    GLCKI+PP GW      A           +  P+ Q V+G +GV+ + L++ K +++  F+ALA  K+   +    +  ER FW+ + P   PP+YGAD+ GSLF+D A  + WN+  LD +++ +  +LPG+T AMLYFGMWRAMFA HTEDM+LYSIN+LH GRPK WY IPP S  + E +AQSL P+    C +FLRHKTS+ +P  LRE  +PF+ +VQ PGE+VITFP SYH GFN GFN+AE+ NF T RW+  GR AK+C C P  V I++D F   + +   +DR   +A
Sbjct:   18 SMVDAPVFRPTPSEFASFPRYIRTVVEPQCQTIGLCKIVPPLGWV-----ARASGYDNVAFDIHTPLSQHVAGKKGVFNVDLVERKSMTLDAFKALAVAKDTVTHLLDDDAIERAFWKGLRPTMEPPVYGADLVGSLFQDDALSNPWNVNNLDTILRSV--DLPGVTQAMLYFGMWRAMFALHTEDMDLYSINFLHTGRPKFWYGIPPQSAAKLERVAQSLFPEKDMTCHQFLRHKTSLIAPTKLREHSVPFYKVVQRPGEFVITFPGSYHQGFNMGFNIAESVNFATLRWVGLGRAAKLCHCVPGQVRIDLDAFVHSIFSSPGSDRLDADA 342          
BLAST of NO13G02320 vs. NCBI_GenBank
Match: CCA18660.1 (hypothetical protein TRIADDRAFT_27796 [Albugo laibachii Nc14])

HSP 1 Score: 309.3 bits (791), Expect = 4.000e-80
Identity = 153/339 (45.13%), Postives = 220/339 (64.90%), Query Frame = 0
Query:    4 TSCPVFRPTMDEFKNFSAYI-DKIDSKIGDAGLCKIIPPEGWYTPPTEAELEEMLEERQLLIPPIKQCVSGLRGVYQLGLMDSKKLSVRDFRALAHK---NEPDYETSYEERERLFWRSMGPVTPPPLYGADMSGSLFRDGA-SGWNLAELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPASQKRFESMAQSLDPQGFRGCSEFLRHKTSIFSPKVLRESGIPFH------TLVQEPGEYVITFPASYHAGFNHGFNVAEATNFTTERWLSKGREAKVCRCQPYSVHINMDDFAAKLEAKRAADRAKVEALP 332
            T+CPVF P+ ++F +FS+YI  +++ K  D G+CKI+PP+GW+    + +++ ++E       P+ Q V+G +GV+ + L++ K L+ ++F+ +A +    EP      +E ER FW+SM      P+YGAD+ GSLF     S WNL +L  +  L    LPG+T +MLYFGMWRAMFAFHTEDM+LYSINYLH G+PK WY IPP +   FE  AQ++ P+ +  C +FLRHK S+ SP  L+  GIP +      + ++  GE+VITFP +YH+GFN GFN+AEA NF T RW+  G  A+VC+C P SV I+MDDF   L    ++ +AK + +P
Sbjct:   10 TNCPVFYPSQEQFTSFSSYIRQEVEPKCSDIGICKIVPPKGWFIRNYD-DVDFVVEH------PVSQHVAGKKGVFNIDLVEKKSLTAQEFKEIAAQCSDGEPRDLFKMDEIERAFWKSMRSTMDAPIYGADIEGSLFDSSCNSTWNLNDLKTI--LCRIELPGVTRSMLYFGMWRAMFAFHTEDMDLYSINYLHHGKPKFWYCIPPHAASAFERAAQAMYPEKYHSCHQFLRHKNSMISPNQLKAFGIPVYKVGNALSFIESEGEFVITFPTAYHSGFNLGFNIAEAVNFATLRWVPFGLRARVCKCSPESVRIDMDDFLISL---FSSGKAKSDDIP 336          
BLAST of NO13G02320 vs. NCBI_GenBank
Match: ETM45306.1 (hypothetical protein L914_09600 [Phytophthora parasitica])

HSP 1 Score: 307.0 bits (785), Expect = 2.000e-79
Identity = 146/317 (46.06%), Postives = 210/317 (66.25%), Query Frame = 0
Query:    6 CPVFRPTMDEFKNFSAYI-DKIDSKIGDAGLCKIIPPEGWYTPPTE-AELEEMLEERQLLIPPIKQCVSGLRGVYQLGLMDSKKLSVRDFRAL---AHKNEPDYETSYEERERLFWRSMGPVTPPPLYGADMSGSLFRDG-ASGWNLAELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPASQKRFESMAQSLDPQGFRGCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEYVITFPASYHAGFNHGFNVAEATNFTTERWLSKGREAKVCRCQPYSVHINMDDFAAKL 317
            CP F PT  EF++F+ YI   ++ +  + G+CK+IPP GW+T   + ++L+  +        P+ Q V+G +G++ + L++ K +S  +F+A+   A   EP+      E ER FW+ +     PP YGAD+  +LF D  A  WNL +L+ +++ +  +LPG+T +MLYFGMWRAMFAFHTEDM+LYSINY+H G+PK WY +PP +  + E  AQS+ P+    C +FLRHKTS+ SP  L+E G+PF+   Q+PGE++ITFPA+YH GFN GFN+AEA NF T  W+  G +AKVC+C P SV I+MD F  K+
Sbjct:   22 CPEFYPTRTEFQSFATYIRTVVEPQCANIGICKVIPPRGWFTRSYDISQLDCQVR------APVCQHVAGKKGIFNVDLVERKTMSPVEFQAMTDAATDKEPEDTEDPLEVERRFWKGLRGTMDPPTYGADIVSTLFSDADALSWNLNDLNTILRKI--DLPGVTQSMLYFGMWRAMFAFHTEDMDLYSINYVHTGKPKFWYGVPPDAAPQLERAAQSMFPEKHHECHQFLRHKTSLISPARLKEFGVPFYRAFQKPGEFIITFPATYHQGFNLGFNIAEAVNFATLHWIPYGLKAKVCKCLPDSVRIDMDSFLTKI 330          
BLAST of NO13G02320 vs. NCBI_GenBank
Match: ETP43407.1 (hypothetical protein F442_09836 [Phytophthora parasitica P10297])

HSP 1 Score: 307.0 bits (785), Expect = 2.000e-79
Identity = 146/317 (46.06%), Postives = 210/317 (66.25%), Query Frame = 0
Query:    6 CPVFRPTMDEFKNFSAYI-DKIDSKIGDAGLCKIIPPEGWYTPPTE-AELEEMLEERQLLIPPIKQCVSGLRGVYQLGLMDSKKLSVRDFRAL---AHKNEPDYETSYEERERLFWRSMGPVTPPPLYGADMSGSLFRDG-ASGWNLAELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPASQKRFESMAQSLDPQGFRGCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEYVITFPASYHAGFNHGFNVAEATNFTTERWLSKGREAKVCRCQPYSVHINMDDFAAKL 317
            CP F PT  EF++F+ YI   ++ +  + G+CK+IPP GW+T   + ++L+  +        P+ Q V+G +G++ + L++ K +S  +F+A+   A   EP+      E ER FW+ +     PP YGAD+  +LF D  A  WNL +L+ +++ +  +LPG+T +MLYFGMWRAMFAFHTEDM+LYSINY+H G+PK WY +PP +  + E  AQS+ P+    C +FLRHKTS+ SP  L+E G+PF+   Q+PGE++ITFPA+YH GFN GFN+AEA NF T  W+  G +AK+C+C P SV I+MD F  KL
Sbjct:   22 CPEFYPTRTEFQSFATYIRTVVEPQCANIGICKVIPPRGWFTRSYDISQLDCQVR------APVCQHVAGKKGIFNVDLVERKTMSPVEFQAMTDAATDKEPEDTEDPLEVERRFWKGLRGTMDPPTYGADIVSTLFGDADALSWNLNDLNTILRKI--DLPGVTQSMLYFGMWRAMFAFHTEDMDLYSINYVHTGKPKFWYGVPPDAAPQLERAAQSMFPEKHHECHQFLRHKTSLISPARLKEFGVPFYRAFQKPGEFIITFPATYHQGFNLGFNIAEAVNFATLHWIPYGLKAKICKCLPDSVRIDMDSFLTKL 330          
BLAST of NO13G02320 vs. NCBI_GenBank
Match: ETI45507.1 (hypothetical protein F443_09933 [Phytophthora parasitica P1569])

HSP 1 Score: 306.6 bits (784), Expect = 2.600e-79
Identity = 146/317 (46.06%), Postives = 210/317 (66.25%), Query Frame = 0
Query:    6 CPVFRPTMDEFKNFSAYI-DKIDSKIGDAGLCKIIPPEGWYTPPTE-AELEEMLEERQLLIPPIKQCVSGLRGVYQLGLMDSKKLSVRDFRAL---AHKNEPDYETSYEERERLFWRSMGPVTPPPLYGADMSGSLFRDG-ASGWNLAELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPASQKRFESMAQSLDPQGFRGCSEFLRHKTSIFSPKVLRESGIPFHTLVQEPGEYVITFPASYHAGFNHGFNVAEATNFTTERWLSKGREAKVCRCQPYSVHINMDDFAAKL 317
            CP F PT  EF++F+ YI   ++ +  + G+CK+IPP GW+T   + ++L+  +        P+ Q V+G +G++ + L++ K +S  +F+A+   A   EP+      E ER FW+ +     PP YGAD+  +LF D  A  WNL +L+ +++ +  +LPG+T +MLYFGMWRAMFAFHTEDM+LYSINY+H G+PK WY +PP +  + E  AQS+ P+    C +FLRHKTS+ SP  L+E G+PF+   Q+PGE++ITFPA+YH GFN GFN+AEA NF T  W+  G +AKVC+C P SV I+MD F  K+
Sbjct:   22 CPEFYPTRTEFQSFATYIRTVVEPQCANIGICKVIPPRGWFTRSYDISQLDCQVR------APVCQHVAGKKGIFNVDLVERKTMSPVEFQAMTDAATDKEPEDTEDPLEVERRFWKGLRGTMDPPTYGADIVSTLFGDADALSWNLNDLNTILRKI--DLPGVTQSMLYFGMWRAMFAFHTEDMDLYSINYVHTGKPKFWYGVPPDAAPQLERAAQSMFPEKHHECHQFLRHKTSLISPARLKEFGVPFYRAFQKPGEFIITFPATYHQGFNLGFNIAEAVNFATLHWIPYGLKAKVCKCLPDSVRIDMDSFLTKI 330          
The following BLAST results are available for this feature:
BLAST of NO13G02320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21898.13.700e-26761.34lysine-specific demethylase 4c isoform 1 [Nannochl... [more]
PRP83144.11.700e-8351.74jumonji domain containing protein [Planoprotosteli... [more]
CCI43005.16.600e-8347.22unnamed protein product [Albugo candida][more]
CCA18657.17.300e-8246.25hypothetical protein TRIADDRAFT_27796 [Albugo laib... [more]
XP_024581064.12.800e-8145.89DNA damage-responsive repressor GIS1/RPH1, jumonji... [more]
XP_008607938.13.100e-8046.69hypothetical protein SDRG_04063 [Saprolegnia dicli... [more]
CCA18660.14.000e-8045.13hypothetical protein TRIADDRAFT_27796 [Albugo laib... [more]
ETM45306.12.000e-7946.06hypothetical protein L914_09600 [Phytophthora para... [more]
ETP43407.12.000e-7946.06hypothetical protein F442_09836 [Phytophthora para... [more]
ETI45507.12.600e-7946.06hypothetical protein F443_09933 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001665NSK001665Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02320.1NO13G02320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|112384gene_6780Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100231g8gene8540Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02320.1NO13G02320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02320 ID=NO13G02320|Name=NO13G02320|organism=Nannochloropsis oceanica|type=gene|length=3065bp
TGCCTCAACCCCATCCCCACAACCACAGTAGAGCCAGTGGAACGATTTGC
GCAGGAAACGACCGTAGCGGCAAGCCACGCCTAGGATTAGGAGACAAGCG
GAGGACCTGAGGTTCATCACCGCTCTGGCTAGTCACACCTTCACCGTTCG
TGTTGACGACATAAACTTTGCGCCTTCTGGGGAAGCAGTCGCGAGAGCCC
CTCAAACACGCCGCATTGCGGCGACTATCTCTATCTTTCGTCACCGCCGT
CCTATCACGGCCCACCGAACTTTCCATCAGAACCATGTCCAAAACATCCT
GTCCGGTCTTCCGGCCGACGATGGACGAGTTTAAGAATTTCTCTGCGTAC
ATTGATAAGATCGACAGCAAGATCGGCGATGCTGGCCTTTGCAAAATCAT
TCCTCCCGAGGGGTGGTACACTCCTCCGACGGAGGCCGAGTTGGAGGAAA
TGTTGGAGGAGAGGCAGCTGCTGATTCCGCCCATCAAGCAGTGCGTCTCG
GGCCTGCGCGGTGTTTACCAGCTCGGGCTCATGGACAGTAAGAAGCTGAG
CGTCAGGGATTTCCGAGCGCTTGCGCACAAAAATGAGCCGGATTATGAGA
CGTCGTACGAGGAGCGGGAACGTTTGTTCTGGAGGAGCATGGGGCCCGTG
ACCCCGCCCCCTCTGTACGGCGCGGACATGAGCGGGTCACTCTTCCGGGA
CGGGGCAAGTGGCTGGAATCTGGCAGAACTTGACAACATGATCAAATTGC
TGCCGTCCAATTTGCCGGGGATTACGACTGCGATGCTTTATTTCGGAATG
TGGCGGGCCATGTTTGCCTTCCACACCGAGGATATGAACCTCTATAGCAT
CAACTACCTCCATGCCGGCCGCCCCAAGAGTTGGTATTCCATCCCCCCTG
CCTCTCAGAAGCGGTTCGAGAGCATGGCGCAGTCATTGGATCCACAGGGA
TTCCGTGGCTGTTCTGAATTTTTGCGACACAAGACCAGTATATTTTCGCC
CAAGGTATTGCGGGAATCCGGTATCCCATTCCACACCCTCGTCCAGGAGC
CCGGTGAATACGTGATTACCTTTCCTGCCTCCTATCACGCCGGATTCAAC
CACGGTTTCAATGTTGCAGAAGCGACGAATTTCACGACAGAACGCTGGTT
GAGTAAGGGAAGGGAGGCCAAGGTTTGTCGATGCCAGCCTTATTCTGTGC
ACATTAATATGGACGACTTTGCCGCCAAGCTCGAAGCCAAGCGTGCCGCT
GACCGGGCGAAGGTCGAGGCATTGCCTAGCAAGACAGGTAAGATTGAACG
TAAGAGGATTCTGAAGCGCCTGGGGCACACCGGATGGCTGGCCTGGCACG
AGCAAGAGGAGGACGCAAGGGTGCAGGAGAAGATGAGGTCGCAGAAGGAG
CGACAGCGCCTGCAGCGGGAGCGGACATACTTGCGACGCAGGGCGAAATT
GAGGGAGTTGCAGGAGGGCACGTATGACCCGGCTGTAGGGGCCAAGCGGC
GGGCGGGCGGCCCTGACGATTATACGTTAGGAGGGTCGGAGGAGGAGACG
GAGGGGAGCGTGGAGGAGGAAGGGAGCGGACATTCTATTGAAGAGGAGGA
GGAGAGAAGAGAGGGGGGGGAGGAGGTTTTGGCGGAGCAGGAGCTGTGGG
ACTTTCGATGTTCGTGTGGTGAGATTTGCAGTAGCGAGACACCGGTGGCG
AACTGGCCAAAGGGGGCCATGTTTCAGTGCACGGGCTGCTTAACCTGGTC
GCACACCCGCTGTCTCTATAGCAAGGATGTGGCGCCTCGGAAGGCGTTTT
GTGCGGGATGTCATCAGGTGCTGAAGACGTTGGAAGGTTTGGGTGCGAAC
TGGCATACTGGGCGTCAGATCGACGTTCGGTCGCGGGTGGTTGTGTGTCG
GGGGCCGCGGGGGCTTGACGAGGGAACGGTAACCATGCTCGGGGAGGGGA
TGGCGCGTGTTTATTTTAAAGGTCTCAGACAGCCTAAGAAGAAGAGAAAA
GGAGGACGGAGAGTGGCCGGAGAACTGGAAGATGTGAGACCGACGAAGGA
GCAGGCGGCTCCGGTAGAGGAGTGGATCAACATCACATCCAACCGCTTTT
TGAGTAGAGAGAGGATCAAGACAGCCCTCGCTGCCTTCAACTTCCAGTCA
GCTGAGGCGAGGGAATCTGGCGTTAGGTTGGAAATGAGGAAGAAGGCTCG
TTTAGAGCAGCAACGACTGCAGTGTGAAGAGCAGGGGCATTACCGCCATC
GTCAACACAGCTCTCCTTCGACGTCCTCCTCCGCTGCTGCTGCTGCTGCT
GCTGCTGCTTTTGCAAGCACGCCCCACCACTCAAGCGGAATGTGCGTGAC
CTTCTCTGCCTCTGATCGCGGCACCATGGGCCGAGCAGCAGCAGCAGCAG
CACCAGCACCAGCACCGACGCTGGCGGGTGGTTTTGCTTATCCTTCCTCC
CTGATGCGGGGCGTGCCTTTGCCTAACGCCGATGCAGCTGTTCGGCATGC
GAAATTTCAGAAGGACCTCGCGCGGAGCAAGAAGGCCTTTCGAGGCCTCT
TCTCCCGGACGCAGAAGGTGGAGTCGGCGCTGGCTGGGGGTTATCAACCG
TATCGTGGCCCGCAGGGGCAGGAAATCTCAGTATTTGATGGGAAGTGGTC
GGATGACGAGGAAGAGGAGGATGAGGGAGGTAAAGAGGCTGGAGCTGTGA
GTGAGCGCGGGGACAACTCTGTGGTGATGGCAAAGGCTGACGACACGAAA
GGCTGCACTAATGAGGGCAAGGATCAACAGACGACGGACCCCTCCAAGCC
GGCTGCAGCCCCTACATTGATCCGGTCAACTGCCTCCTCCTCCTACTATT
ACCCTCCCCCCGCTGCCTCCCATTCTTCATCCTCCGCCTACCAATATCTC
CAGCAACAACACCAGCAGCGGACGCAGGCAGCCAATGTCCAAGGCCAACA
GTATGCAACATCCACCAAGTCTTCATATTTCTCTTCCCCTTCTTCCACAT
TCTCGTCCATGCCCTCGGCGTCGGGGGCGGTCGCGCCTGCGGCTGAGGCG
AAAGAGTTGAAGTAG
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protein sequence of NO13G02320.1

>NO13G02320.1-protein ID=NO13G02320.1-protein|Name=NO13G02320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=927bp
MSKTSCPVFRPTMDEFKNFSAYIDKIDSKIGDAGLCKIIPPEGWYTPPTE
AELEEMLEERQLLIPPIKQCVSGLRGVYQLGLMDSKKLSVRDFRALAHKN
EPDYETSYEERERLFWRSMGPVTPPPLYGADMSGSLFRDGASGWNLAELD
NMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSW
YSIPPASQKRFESMAQSLDPQGFRGCSEFLRHKTSIFSPKVLRESGIPFH
TLVQEPGEYVITFPASYHAGFNHGFNVAEATNFTTERWLSKGREAKVCRC
QPYSVHINMDDFAAKLEAKRAADRAKVEALPSKTGKIERKRILKRLGHTG
WLAWHEQEEDARVQEKMRSQKERQRLQRERTYLRRRAKLRELQEGTYDPA
VGAKRRAGGPDDYTLGGSEEETEGSVEEEGSGHSIEEEEERREGGEEVLA
EQELWDFRCSCGEICSSETPVANWPKGAMFQCTGCLTWSHTRCLYSKDVA
PRKAFCAGCHQVLKTLEGLGANWHTGRQIDVRSRVVVCRGPRGLDEGTVT
MLGEGMARVYFKGLRQPKKKRKGGRRVAGELEDVRPTKEQAAPVEEWINI
TSNRFLSRERIKTALAAFNFQSAEARESGVRLEMRKKARLEQQRLQCEEQ
GHYRHRQHSSPSTSSSAAAAAAAAAFASTPHHSSGMCVTFSASDRGTMGR
AAAAAAPAPAPTLAGGFAYPSSLMRGVPLPNADAAVRHAKFQKDLARSKK
AFRGLFSRTQKVESALAGGYQPYRGPQGQEISVFDGKWSDDEEEEDEGGK
EAGAVSERGDNSVVMAKADDTKGCTNEGKDQQTTDPSKPAAAPTLIRSTA
SSSYYYPPPAASHSSSSAYQYLQQQHQQRTQAANVQGQQYATSTKSSYFS
SPSSTFSSMPSASGAVAPAAEAKELK*
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Synonyms
Publications