NO13G01200, NO13G01200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01200 vs. NCBI_GenBank
Match: CBN76021.1 (MutS protein homolog 4 [Ectocarpus siliculosus]) HSP 1 Score: 425.2 bits (1092), Expect = 4.700e-115 Identity = 320/812 (39.41%), Postives = 456/812 (56.16%), Query Frame = 0 Query: 39 MSPLRTHVLQTHVCQDSQSYAETIDLLLELRPREILLHDGSRKKTLAQKISLLSQHPEVRARSCLPVFVSRNYFDQDRGAELVRKLSMHTLDQELFLSYTFLASAHCLLKYMGSTFAVRFPPRCLKVLSGYGYGGRLVIDRHSVKDLELVSNARTASQKESLFGCINKTKTDVGGKELKKNLLAPLTDRTTIEGRLDLVEFLIAQGGPEVINSLQTALGCLTALDRMLAGIAVVEVKEDVTSAKKMIHTVVLLKMFLTQALQLVDELAQLL---------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPAFAEISALLQEMISESTVHERNAKTRRLQECFAVSAGLCGLLDVARKTFLQSVEDIYALASTYAKEHGLPELRMLHSTSRGYYLSLPSSLVDLPPLFIQASVVKKQLHCTTQELASLSRAADESANQCVLLTCAVLRDTLLGRVR-EHVESLFKAVEAIALLDMMLSFADLVVSDELGPWTRPIISGGGEGGREDGALAVKQGRHPVVCHYVPG--FVPNDVFAGRFGNVVVVSGVNGSGKTVFVKTLALIVVLAQIGCFVPAEAASIPIRDRLLTSLSTSDDMECNLSTFMSEMRRAAYVLDSLSPRSLVILDELGRGTSTIDGSALSYAVAEALLSARALSFFVTHYRLLILSPDQHQNGGLSKFYGNVKHIHMSAVLT-------------EDTRQLSFMHRVQEGPSAITSGYGIALAADVGFPEDVIVDAERVKCLLEAQEERXXXXXXXXXXXXXXGWKYEVLRRLMLLK 808 M+ + V+Q QDSQSYA+T+ L + P EILLHDG+R + LA K+ + ++ C +FVSR YFDQD+GAEL+++L+ ++D +L YT LA+++CL++Y+ ++ F L+V + G G + IDR + K+LEL+++AR+ QK+SLFG IN T+T VG + L+ +L P TD TIE RLDLV F + G V NS LG T LDRML+ + V + +A + I T++ L+ L LV L + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L ++++ST + RN R +ECFAV A + G+LDVAR TFLQS+EDIY A +EH ++++ S SRGY+L +P+ VDLPP IQA K + CTT+E++SLS A+E+ +L+T V++ TL +R E +++LF E++ALLDM+ FADLV L + RP ++ DG ++++ GRHP+V FVPND + F N VV+G N SGK+ ++K LIV++AQ+GC+VPAE A IP+R LL+ + T DD+E N+STF+ EMR A V+ +DELGRGTS +G A+++AVAE LLS+ A + FVTHY Q GL+ Y NV++IH+ L L ++H+ +G GYGI A G P +++ +A ++ + + YE+LR L LK Sbjct: 1 MNTANSSVIQVSWVQDSQSYAKTLAALQGVDPDEILLHDGTRGRVLASKV--VGAFHQIEKSCCRVLFVSRQYFDQDKGAELLKRLASGSVDADLMSKYTALAASYCLIRYVENSTGSTFADASLRVRTDSGGDGSMYIDRSTAKELELITDARSGGQKKSLFGVINHTRTAVGARLLRSTILGPCTDIATIEERLDLVTFFLTMEG--VFNSTLKVLGEFTDLDRMLSDLVTVPKQVTPVTAGRSIATLICLRHTLRLMAPLVQALEEGVRESGQQSTARRDGGGGEGEYDERFHNGDDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSVLTDSTSYTRNPAALRHEECFAVRADVDGMLDVARTTFLQSMEDIYRAADAMTEEHSY-QVKVSCSVSRGYHLIIPAG-VDLPPGLIQAVQNTKTIACTTEEVSSLSDRANEAVRTALLITHDVIQ-TLADEIRTEALDALFAVTESVALLDMIFGFADLVTLSPLA-FCRPEVTA-------DGPMSIRGGRHPIVGAVQEDWKFVPNDTYMSPFINFRVVTGPNNSGKSTYLKQAGLIVLMAQMGCYVPAEMAVIPVRTSLLSRIGTGDDLENNVSTFLMEMREIAQVM----------IDELGRGTSNREGLAVAWAVAEKLLSSSAYTLFVTHY---------SQMPGLADLYPNVENIHLQTALAPXXXXXXXXXXXXXXXXALRYLHKALDGRCDPGDGYGIRTAEMCGLPWEIVEEARVLRTQVIDATKAKEIKGSAGAPSEAEKDAYELLRTLATLK 778
BLAST of NO13G01200 vs. NCBI_GenBank
Match: XP_002287292.1 (DNA mismatch repair mutS protein, partial [Thalassiosira pseudonana CCMP1335] >EED94735.1 DNA mismatch repair mutS protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 380.6 bits (976), Expect = 1.300e-101 Identity = 243/678 (35.84%), Postives = 374/678 (55.16%), Query Frame = 0 Query: 107 VSRNYFDQDRGAELVRKLS-MHTLDQELFLSYTFLASAHCLLKYMGSTFAVRFPPRCLKVLSGYGYGGRLVIDRHSVKDLELVSNARTASQKESLFGCINKTKTDVGGKELKKNLLAPLTDRTTIEGRLDLVEFLIAQGGPEVINSLQTALGCLTALDRMLAGIAVVEVKEDVTSAKKMIHTVVLLKMFLTQALQLVDELAQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPAFAEISALLQEMISESTVHERNAKTRRLQECFAVSAGLCGLLDVARKTFLQSVEDIYALASTYAKEHGLPELRMLHSTSRGYYLSLPSSL-VDLPPLFIQASVVKKQLHCTTQELASLSRAADESANQCVLLTCAVLRDTLLGRVREHVESLFKAVEAIALLDMMLSFADLVVSDELGPWTRPIISGGGEGGREDGALAVKQGRHPVVCHYVPGFVPNDVFAGRFGNVVVVSGVNGSGKTVFVKTLALIVVLAQIGCFVPAEAASIPIRDRLLTSLSTSDDMECNLSTFMSEMRRAAYVLDSLSPRSLVILDELGRGTSTIDGSALSYAVAEALLSARALSFFVTHYRLLILSPDQHQNGGLSKFYGNVKH----IHMSAVLTEDTRQLSFMHRVQEGPSAITSGYGIALAADVGFPEDVIVDAERVKCLLEAQEE 779 V R+YFDQ +GAEL+RKL+ T D L Y L+S++ +L+Y CL + G R+ IDR ++ +LEL+ NA+T SL G I+ TKT VGG+ L+ NL+AP T TI RLDLV+ L+ E + L L +D+MLA +A+ K+ T ++ + + + L L+ A +L PA A + + + +EST + +N+ R QECFA+ G++DV RK FL +V+DIY LA YA+ + + + + +T+RGYYLS+ + L +DLP +FIQ + +HCTT+E+ SL+ A E+ +L+T A +++ +L R+H + L +AIALLDM FAD V S + PW RP++S + + G + FVPND ++ N V++G+NGSGK+ ++K +ALIV+LA GC+VPAE A +PIRD++ T + T+DD E N+STF+ EM+ A++ +S + +SL +LDELGR TS DG A+++AV+E LL+ RA++FFVTHY Q L++ Y NV++ H+S V ED +++ H++ GP YG+ +AA G+PED + +A +++ LE Q++ Sbjct: 1 VPRSYFDQTKGAELLRKLARQDTYDATLVEEYILLSSSYAVLQYAQLCLGAELSRHCLTLDINVGGNHRMNIDRSTMVNLELMINAKTGRNAHSLVGTIDCTKTSVGGRLLRTNLMAPPTRLDTIHARLDLVDSLLED--EEFFYVVMEHLEDLPDVDKMLAYVALAPRKKRQTVTARIASRGISALVCIKSILSLIPSFAHVL--------------------EQTRHQLLRAILIATKQPALARVLDAVTNIFTESTTYNKNSHAMRHQECFALKPNTDGMMDVLRKAFLANVDDIYRLADEYAEAYDI-TVSVKETTARGYYLSVSADLGLDLPQIFIQPVKNGRFIHCTTEEVYSLNCRAQENVQDLLLMTHARIQE-VLEVARDHYDCLASLSDAIALLDMCHCFADNVASSRM-PWCRPVLSDREKHPNNQEDASSSAGGN--------DFVPNDTYSSALQNFTVITGINGSGKSTYLKQIALIVILAHCGCYVPAEEALVPIRDQICTRIGTTDDQEHNISTFLLEMKETAFICNSTTEKSLFLLDELGRATSNEDGVAVAWAVSEYLLTKRAMTFFVTHY---------PQISKLAEVYPNVQNQHLGSHISPVYNEDGSNINYTHKILPGPCKAAGDYGLEMAATCGWPEDNLENARKIR--LEVQQK 634
BLAST of NO13G01200 vs. NCBI_GenBank
Match: GAX09541.1 (DNA mismatch repair protein MSH4 [Fistulifera solaris]) HSP 1 Score: 374.4 bits (960), Expect = 9.600e-100 Identity = 264/794 (33.25%), Postives = 421/794 (53.02%), Query Frame = 0 Query: 23 IVCVV-ENRGREVAIATM---SPLRTHVLQTHVCQDSQSYAETIDLLLELRPREILLHDGSRKKTLAQKISLLSQHPEVRARSCLPVFVSRNYFDQDRGAELVRKLS-MHTLDQELFLSYTFLASAHCLLKYMGSTFAVRFPPRCLKVLSGYGYGGRLVIDRHSVKDLELVSNARTASQKESLFGCINKTKTDVGGKELKKNLLAPLTDRTTIEGRLDLVEFLIAQGGPEVINSLQTALGCLTALDRMLAGIAVV--EVKEDVT--------SAKKMIHTVVLLKMFLTQ----ALQLVDELAQLL--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPAFAEISALLQEMISESTVHERNAKTRRLQECFAVSAGLCGLLDVARKTFLQSVEDIYALASTYAKEHGLPELRMLHSTSRGYYLSLPSSL-VDLPPLFIQASVVKKQLHCTTQELASLSRAADESANQCVLLTCAVLRDTLLGRVREHVESLFKAVEAIALLDMMLSFADLVVSDELGPWTRPIISGGGEGGRED-------GALAVKQGRHP-VVCHYVPGFVPNDVFAGRFGNVVVVSGVNGSGKTVFVKTLALIVVLAQIGCFVPAEAASIPIRDRLLTSLSTSDDMECNLSTFMSEMRRAAYVLDSLSPRSLVILDELGRGTSTIDGSALSYAVAEALLSARALSFFVTHYRLLILSPDQHQNGGLSKFYGNVKHIHMSAVLTE-----DTRQLSFMHRVQEGPSAITSGYGIALAADVGFPEDVIVDAERV 770 +VC + EN RE A++ SP + HV + + QSYAET+ L LRP EILL++G LA+KI L + H E C+ F+SR++FDQ RGAEL+R++S T D + Y L+S H +L Y + F L + G R+ +DR S+ LEL+ NA+TA +SL GCI++TKT VG + L+ NL++P + TI+ RL+LV+ + G + + L L +D+ML+ IA + ++KED A + I +V +K L+ AL L L L+ S P E+ + + +E T RN R +ECFA+ L+ V R+TFL++V+DI+ A YA+ + +++ +++ RGY+L++P+ + DLP +F+Q + + + CTT+E+ASL+ A ++ +L+T +++ ++ R + L +A+ALLDM SFAD V + PW+RP++ E RED A ++ G P VV FV ND +A + ++SG+NGSGK+ ++K +A+I +LAQ G +VPAE AS+PIRD+L + +DD E N+STFM EM+ A++ ++ + RSLV++DELGR TS DG A+++A E LL ++++FFV+HY L + + V+++H+SA + + D ++ + H+VQ G +++ YG+ LAA G+P DV+ A + Sbjct: 118 VVCAISENLARETCAASLDVSSPTQLHVTKQ---GNGQSYAETLACLEILRPHEILLNEGRSNSPLARKI-LETFHTE-NGEGCVVKFISRSFFDQTRGAELLRRVSRADTYDLTIVEEYILLSSVHAVLHYTQTNLGGSFARNSLFLSVNAGGLHRMTVDRSSILQLELLVNAKTAKVADSLIGCIDRTKTTVGSRLLRSNLMSPSSSIGTIQTRLELVDIFL--GDADFFFEIMDHLTALPDVDKMLSNIAFIPKDIKEDPAVNIVQRRKVASRGISALVSIKTTLSSLPSLALALNSHLETLVRRFGETERDQQQDDDLRTIRTDRSTLMVGLGGMGEVQRFHLLRAVVFTVSQPELDEVLQAVNAIFTEHTHFTRNNHAMRHKECFALKCDEADLMAVLRQTFLRNVDDIHKKADEYAEIYNF-HVQVRYTSVRGYFLAVPAEIGSDLPAVFLQPAKAGRFITCTTEEIASLNARATDNIQDLLLMTHDRIQE-VIDYARARYDPLAALCDAVALLDMCHSFADHVTLVKT-PWSRPVVF---ERFREDDESSDATNAFVIRNGHFPIVVAGEDKAFVANDTYAPASKPLTIISGINGSGKSTYLKQIAIITILAQCGSYVPAERASVPIRDQLCCRIGNTDDQEHNISTFMQEMKETAFICNNSNTRSLVLVDELGRATSNEDGVAIAWATCEYLLKKQSITFFVSHYPQLTCMAETYPQ--------LVQNVHLSASVGQATGENDIGEIRYTHKVQPGACNVSADYGVELAAHCGWPWDVVRAASEI 890
BLAST of NO13G01200 vs. NCBI_GenBank
Match: GAX29332.1 (DNA mismatch repair protein MSH4 [Fistulifera solaris]) HSP 1 Score: 366.3 bits (939), Expect = 2.600e-97 Identity = 264/790 (33.42%), Postives = 413/790 (52.28%), Query Frame = 0 Query: 23 IVCVV-ENRGREVAIATM---SPLRTHVLQTHVCQDSQSYAETIDLLLELRPREILLHDGSRKKTLAQKISLLSQHPEVRARSCLPVFVSRNYFDQDRGAELVRKLS-MHTLDQELFLSYTFLASAHCLLKYMGSTFAVRFPPRCLKVLSGYGYGGRLVIDRHSVKDLELVSNARTASQKESLFGCINKTKTDVGGKELKKNLLAPLTDRTTIEGRLDLVEFLIAQGGPEVINSLQTALGCLTALDRMLAGIAVV--EVKEDVT--------SAKKMIHTVVLLKMFLTQ----ALQLVDELAQLL--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPAFAEISALLQEMISESTVHERNAKTRRLQECFAVSAGLCGLLDVARKTFLQSVEDIYALASTYAKEHGLPELRMLHSTSRGYYLSLPSSL-VDLPPLFIQASVVKKQLHCTTQELASLSRAADESANQCVLLTCAVLRDTLLGRVREHVESLFKAVEAIALLDMMLSFADLVVSDELGPWTRPII---SGGG-EGGREDGALAVKQGRHP-VVCHYVPGFVPNDVFAGRFGNVVVVSGVNGSGKTVFVKTLALIVVLAQIGCFVPAEAASIPIRDRLLTSLSTSDDMECNLSTFMSEMRRAAYVLDSLSPRSLVILDELGRGTSTIDGSALSYAVAEALLSARALSFFVTHY----RLLILSPDQHQNGGLSKFYGNVKHIHMSAVLTEDTRQLSFMHRVQEGPSAITSGYGIALAADVGFPEDVIVDAERV 770 +VC + EN RE A++ SP + HV + + QSYAET+ L LRP EILL++G LA+KI L + H E C+ F+SR++FDQ RGAEL+R++S T D + Y L+S H L Y + F L + G R+ +DR S+ LEL+ NA+TA SL GCI++TKT VG + L+ NL++P + TI+ RL+LV+ + G + + L L +D+ML+ IA + ++KED A + I +V +K L+ AL L L L+ S P E+ + + +E+T R +ECFA+ L+ V R+TFL++V+DI+ A YA+ + +++ +++ RGY+L++P+ + DLP +F+Q + + + CTT+E+ASL+ A ++ +L+T +++ +L R + L +A+ALLDM SFAD V + PW+RP++ SG E A ++ G P VV F+ ND +A + ++SG+NGSGK+ ++K +A+I +LAQ G +VPAE AS+PIRD+L + +DD E N+STFM EM+ A++ ++ + RSLV++DELGR TS DG A+++A E LL ++++FFV+HY R+ P QN LS G A D ++ + H+VQ G +++ YG+ LAA G+P DV+ A + Sbjct: 118 VVCAISENLARETCAASLDVSSPTQLHVTKQ---GNGQSYAETLACLEILRPHEILLNEGRSNSPLARKI-LETFHTE-NGEGCVVKFISRSFFDQTRGAELLRRVSRADTYDPTIVEEYILLSSVHAALHYTQTHLGGSFARNSLFLSVNAGGLHRMTVDRSSILQLELLVNAKTAKVANSLIGCIDRTKTTVGSRLLRSNLMSPSSSIGTIQTRLELVDIFL--GDADFFFEIMDHLTALPDVDKMLSNIAFIPKDIKEDPAVNIVQRRQVASRGISALVSIKTTLSSLPSLALALNTHLETLVRRFGQTEQEQQQDDDLRTVRTDRSTLLVGLGGTGEVQRFHLLRAVLFTVSQPELDEVLQAVNNIFTENTHXXXXXXXXRHKECFALKCDEADLMTVLRQTFLRNVDDIHKKADEYAEIYNF-HVQVRYTSVRGYFLAVPAEVGSDLPSVFLQPAKAGRFITCTTEEIASLNARATDNIQDLLLMTHDRIQE-VLDYARARYDPLAALCDAVALLDMCHSFADHVTLVKT-PWSRPVVFERSGEDVESSDATNAFIIRNGHFPIVVAGEDKAFIANDTYAPANKPLTIISGINGSGKSTYLKQIAIITILAQCGSYVPAERASVPIRDQLCCRIGNTDDHEHNISTFMQEMKETAFICNNSNSRSLVLVDELGRATSNEDGVAIAWATCEYLLKTQSMTFFVSHYPQLTRMAETYPQLVQNVHLSASVGR-------ATGENDIGEIRYTHKVQPGACNVSADYGVELAAHCGWPWDVVRAASEI 890
BLAST of NO13G01200 vs. NCBI_GenBank
Match: XP_024582857.1 (dna mismatch repair protein [Plasmopara halstedii] >CEG46488.1 dna mismatch repair protein [Plasmopara halstedii]) HSP 1 Score: 346.7 bits (888), Expect = 2.100e-91 Identity = 235/760 (30.92%), Postives = 394/760 (51.84%), Query Frame = 0 Query: 22 LIVCVVENRGREVAIATMSPLRTHVLQTHVCQDSQSYAETIDLLLELRPREILLHDGSRKKTLAQKISLLSQHPEVRARSCLPVFVSRNYFDQDRGAELVRKLSMHTLDQELFLSYTFLASAHCLLKYMGSTFAVRFPPRCLKVLSGYGYGGRLVIDRHSVKDLELVSNARTASQKESLFGCINKTKTDVGGKELKKNLLAPLTDRTTIEGRLDLVEFLIAQGGPEVINSLQTALGCLTALDRMLAGIAVVEVKEDVTSAKKMIHTVVLLKMFLTQALQLVDELAQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPAFAEISALLQEMISESTVHERNAKTRRLQECFAVSAGLCGLLDVARKTFLQSVEDIYALASTYAKEHGLPELRMLHSTSRGYYLSLPSSLVDLPPLFIQASVVKKQLHCTTQELASLSRAADESANQCVLLTCAVLRDTLLGRVREHVESLFKAVEAIALLDMMLSFADLV-VSDELGPWTRPIISGGGEGGREDGALAVKQGRHPVVCHYVPG--FVPNDVFAGRFGNVVVVSGVNGSGKTVFVKTLALIVVLAQIGCFVPAEAASIPIRDRLLTSLSTSDDMECNLSTFMSEMRRAAYVLDSLSPRSLVILDELGRGTSTIDGSALSYAVAEALLSARALSFFVTHYRLLILSPDQHQNGGLSKFYGNVKHIHMSAVLTEDTRQLSFMHRVQEGPSAITSGYGIALAADVGFPEDVIVDAERVKCLLEAQEE 779 LI V ENR RE+ I + + + L DS SY + LL +P EIL+ + S+ K + ++I SC V ++R YFDQ +GAE ++++ +++D + +Y +AS C++KY+ V + +K++ +L++D+ ++ LELV A+ +SL +N T+T G + L+ +L P TI R ++V + P + L LDR+L+ + V +++ I +V+ LK L ++V L F I A ++ ++++ R+A +R+QECFAV AG+ G+LDVAR+T+L ++E I+ + TY + G P +R+ ++ RGY+L++P ++ +LP FI+ + + C+T+ L SL+ E+ L+ V++ LL ++R ++ VE+IALLDM+LSF ++V +S P+TRP ++ E G +K+GRHP+V + ++P+D F +V+G N +GK+ +++ ALI ++AQ+GC+VPA A+IPIRDR+ T TSDDME N S+F EM A++L++ + RSLV++DELGRGT+ +G+A+++++ E L+ A + F THY HQ LS+ Y + HM A +T T F + +++GP T YGI AA G P +I +AE + ++ E Sbjct: 62 LIAAVAENRAREIGICAIDLVSPYELLLWTVIDSHSYVNALSLLKAYQPVEILVTETSKAKKVNEEIC-----KNFAGSSCRVVPLARKYFDQTKGAEDIKRVMANSVDINIGRNYVAMASVACVMKYIEYIQGVYIAEKSMKIVISPSI-CKLLMDQATISSLELVQGAQGRKDNQSLCKMLNNTQTSAGNRLLRSTILQPTCHLKTIHARHEVVGVFL--DNPAWYFDVMEELREFVDLDRLLSQLVFVPKAITPRASRIAIGSVIALKHMLDCLPKMVSCL------------------EAASVKLDQPCTLLDSIIVILRDEQFTGIKADIERVVNDRVKVCRSAAQKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEVVHTYKENIGFP-IRLNYTARRGYHLAVPVNIKELPSSFIERVTNRNVICCSTKVLVSLNVRLTEAVTAVYKLSNDVIQQ-LLDKIRPRASAMHAMVESIALLDMLLSFVNVVALSPPDRPYTRPTVT-------EHGNFIIKKGRHPLVECVLKDRRYIPSDTFFDPSSTFHLVTGPNCAGKSTYLRATALITIMAQMGCYVPASDAAIPIRDRICTRFGTSDDMEENASSFAVEMTETAFILETCTSRSLVLIDELGRGTANDEGAAIAWSIGEELIQRGAFTCFATHY---------HQLNYLSQLYPRCRCYHMGAGIT--TNSFHFRYVLKDGPFPSTDMYGIKTAALSGLPTGLIREAEEIYQTVQLNRE 775
BLAST of NO13G01200 vs. NCBI_GenBank
Match: ETL96185.1 (hypothetical protein L917_06196 [Phytophthora parasitica]) HSP 1 Score: 343.2 bits (879), Expect = 2.400e-90 Identity = 239/776 (30.80%), Postives = 396/776 (51.03%), Query Frame = 0 Query: 13 ATVEDEQDDLIVCVVENRGREVAIATMSPLRTHVLQTHVCQDSQSYAETIDLLLELRPREILLHDGSRKKTLAQKISLLSQHPEVRARSCLPVFVSRNYFDQDRGAELVRKLSMHTLDQELFLSYTFLASAHCLLKYMGSTFAVRFPPRCLKVLSGYGYGGRLVIDRHSVKDLELVSNARTASQKESLFGCINKTKTDVGGKELKKNLLAPLTDRTTI------EGRLDLVEFLIAQGGPEVINSLQTALGCLTALDRMLAGIAVVEVKEDVTSAKKMIHTVVLLKMFLTQALQLVDELAQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPAFAEISALLQEMIS------ESTVHER-----NAKTRRLQECFAVSAGLCGLLDVARKTFLQSVEDIYALASTYAKEHGLPELRMLHSTSRGYYLSLPSSLVDLPPLFIQASVVKKQLHCTTQELASLSRAADESANQCVLLTCAVLRDTLLGRVREHVESLFKAVEAIALLDMMLSFADLV-VSDELGPWTRPIISGGGEGGREDGALAVKQGRHPVVCHYVP--GFVPNDVFAGRFGNVVVVSGVNGSGKTVFVKTLALIVVLAQIGCFVPAEAASIPIRDRLLTSLSTSDDMECNLSTFMSEMRRAAYVLDSLSPRSLVILDELGRGTSTIDGSALSYAVAEALLSARALSFFVTHYRLLILSPDQHQNGGLSKFYGNVKHIHMSAVLTEDTRQLSFMHRVQEGPSAITSGYGIALAADVGFPEDVIVDAER 769 A +E LI V ENR RE+ I + + + L DS SY +T+ LL +P E+L+ + S+ + ++IS C V ++R YFDQ +GAE ++++ + +D + +Y +AS C++KY+ V + +KV+ +L++D+ +V LELV R + +SL +N T+T G + L+ +L P T+ + R ++V + P + L LDR+L + V ++ I +V+ LK L +LV L P + I +L E + E VH+R +A +R+QECFAV AG+ G+LDVAR+T+L ++E I+ + Y + G+P +R+ ++ RGY+L++P + DLP FI+ K + C+T+ L SL+ E+ L+ V++ LL ++R ++ VE+IALLDM+LSF ++V +S P+TRPI++ E G + +K+GRHP+V + ++P+D F +++G N +GK+ +++ ALI ++AQ+GC+VPA ASIPIRDR+ T TSDDME N STF EM A++L++ + +SLV++DELGRGT+ +G+A+++++ E L+ + + F THY HQ L++ Y + HM +T + F + +++GP + YGI AA G P ++I +AER Sbjct: 56 AELESRSSFLIAAVAENRAREIGICAIDLVSPYELLLWTVIDSHSYVDTVALLKAYQPVEVLVVETSKSGKVNEEIS-----KRFTGSKCRVVPLARKYFDQTKGAEDIKRVMANNVDINIGRNYVVMASVACVMKYIEYIQGVYIAEKSMKVVLSPS-TRKLLMDQATVSSLELVQGTRGRNDNQSLCKMLNNTQTSAGNRLLRSTMLQPTCHLKTMYPSAYNQARQEVVGIFL--DNPAWFFDVMEELSGFVDLDRLLNQLVFVPKVITPRVSRIAIGSVIALKHTLECLPRLVSSL-----------------------------ETTSIKLDQPCPLLDSVIQSLRDEQFTWIKEDIERVVHDRVKVCTSAAQKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEVVHMYKENLGIP-IRINYTARRGYHLAVPVNAKDLPASFIERVTTKTVICCSTKALVSLNVRLKEALTAVYKLSNDVIQQ-LLDKIRPRASTMHAMVESIALLDMLLSFVNVVALSPPDQPYTRPIVT-------EHGNMIIKKGRHPLVERVLKDRAYIPSDSFFDPLSTFHIITGPNCAGKSTYLRATALITIMAQMGCYVPASEASIPIRDRICTRFGTSDDMEENASTFAVEMTETAFILEACTSKSLVLIDELGRGTANDEGAAIAWSIGEELIERGSYTCFATHY---------HQLNRLAQLYPRCRCYHMGT--ESNTNSVHFRYVLKDGPFPSSGMYGIKTAAQSGLPAELIREAER 774
BLAST of NO13G01200 vs. NCBI_GenBank
Match: ETM49355.1 (hypothetical protein L914_06312 [Phytophthora parasitica] >ETP47435.1 hypothetical protein F442_06560 [Phytophthora parasitica P10297]) HSP 1 Score: 343.2 bits (879), Expect = 2.400e-90 Identity = 239/776 (30.80%), Postives = 396/776 (51.03%), Query Frame = 0 Query: 13 ATVEDEQDDLIVCVVENRGREVAIATMSPLRTHVLQTHVCQDSQSYAETIDLLLELRPREILLHDGSRKKTLAQKISLLSQHPEVRARSCLPVFVSRNYFDQDRGAELVRKLSMHTLDQELFLSYTFLASAHCLLKYMGSTFAVRFPPRCLKVLSGYGYGGRLVIDRHSVKDLELVSNARTASQKESLFGCINKTKTDVGGKELKKNLLAPLTDRTTI------EGRLDLVEFLIAQGGPEVINSLQTALGCLTALDRMLAGIAVVEVKEDVTSAKKMIHTVVLLKMFLTQALQLVDELAQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPAFAEISALLQEMIS------ESTVHER-----NAKTRRLQECFAVSAGLCGLLDVARKTFLQSVEDIYALASTYAKEHGLPELRMLHSTSRGYYLSLPSSLVDLPPLFIQASVVKKQLHCTTQELASLSRAADESANQCVLLTCAVLRDTLLGRVREHVESLFKAVEAIALLDMMLSFADLV-VSDELGPWTRPIISGGGEGGREDGALAVKQGRHPVVCHYVP--GFVPNDVFAGRFGNVVVVSGVNGSGKTVFVKTLALIVVLAQIGCFVPAEAASIPIRDRLLTSLSTSDDMECNLSTFMSEMRRAAYVLDSLSPRSLVILDELGRGTSTIDGSALSYAVAEALLSARALSFFVTHYRLLILSPDQHQNGGLSKFYGNVKHIHMSAVLTEDTRQLSFMHRVQEGPSAITSGYGIALAADVGFPEDVIVDAER 769 A +E LI V ENR RE+ I + + + L DS SY +T+ LL +P E+L+ + S+ + ++IS C V ++R YFDQ +GAE ++++ + +D + +Y +AS C++KY+ V + +KV+ +L++D+ +V LELV R + +SL +N T+T G + L+ +L P T+ + R ++V + P + L LDR+L + V ++ I +V+ LK L +LV L P + I +L E + E VH+R +A +R+QECFAV AG+ G+LDVAR+T+L ++E I+ + Y + G+P +R+ ++ RGY+L++P + DLP FI+ K + C+T+ L SL+ E+ L+ V++ LL ++R ++ VE+IALLDM+LSF ++V +S P+TRPI++ E G + +K+GRHP+V + ++P+D F +++G N +GK+ +++ ALI ++AQ+GC+VPA ASIPIRDR+ T TSDDME N STF EM A++L++ + +SLV++DELGRGT+ +G+A+++++ E L+ + + F THY HQ L++ Y + HM +T + F + +++GP + YGI AA G P ++I +AER Sbjct: 56 AELESRSSFLIAAVAENRAREIGICAIDLVSPYELLLWTVIDSHSYVDTVALLKAYQPVEVLVVETSKSGKVNEEIS-----KRFTGSKCRVVPLARKYFDQTKGAEDIKRVMANNVDINIGRNYVVMASVACVMKYIEYIQGVYIAEKSMKVVLSPS-TRKLLMDQATVSSLELVQGTRGRNDNQSLCKMLNNTQTSAGNRLLRSTMLQPTCHLKTMYPSAYNQARQEVVGIFL--DNPAWFFDVMEELSGFVDLDRLLNQLVFVPKVITPRVSRIAIGSVIALKHTLECLPRLVSSL-----------------------------ETTSIKLDQPCPLLDSVIQSLRDEQFTWIKEDIERVVHDRVKVCTSAAQKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEVVHMYKENLGIP-IRINYTARRGYHLAVPVNAKDLPASFIERVTTKTVICCSTKALVSLNVRLKEALTAVYKLSNDVIQQ-LLDKIRPRASTMHAMVESIALLDMLLSFVNVVALSPPDQPYTRPIVT-------EHGNMIIKKGRHPLVERVLKDRAYIPSDSFFDPLSTFHIITGPNCAGKSTYLRATALITIMAQMGCYVPASEASIPIRDRICTRFGTSDDMEENASTFAVEMTETAFILEACTSKSLVLIDELGRGTANDEGAAIAWSIGEELIERGSYTCFATHY---------HQLNRLTQLYPRCRCYHMGT--ESNTNSVHFRYVLKDGPFPSSGMYGIKTAAQSGLPAELIREAER 774
BLAST of NO13G01200 vs. NCBI_GenBank
Match: XP_009827973.1 (hypothetical protein, variant 2 [Aphanomyces astaci] >ETV82304.1 hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 342.4 bits (877), Expect = 4.000e-90 Identity = 242/765 (31.63%), Postives = 398/765 (52.03%), Query Frame = 0 Query: 23 IVCVVENRGREVAIATMSPLRTHVLQTHVCQDSQSYAETIDLLLELRPREILLHDGSRKKTLAQKISLLSQHPEVRARSCLPVFVSRNYFDQDRGAELVRKLSMHTLDQELFLSYTFLASAHCLLKYMGSTFAVRFPPRCLKVLSGYGYGGRLVIDRHSVKDLELVSNARTASQKESLFGCINKTKTDVGGKELKKNLLAPLTDRTTIEGRLDLVEFLIAQGGPEVINSLQTALGCLTALDRMLAGIAVVEVKEDVTSAKKMIHTVVLLKMF------LTQALQLVDELAQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPAFAEISALLQEMISESTVHERNAKTRRLQECFAVSAGLCGLLDVARKTFLQSVEDIYALASTYAKEHGLPELRMLHSTSRGYYLSLPSSLVDLPPLFIQASVVKKQLHCTTQELASLSRAADESANQCVLLTCAVLRDTLLGRVREHVESLFKAVEAIALLDMMLSFADLV-VSDELGPWTRPIISGGGEGGREDGALAVKQGRHPVVCHYVPG--FVPNDVFAGRFGNVVVVSGVNGSGKTVFVKTLALIVVLAQIGCFVPAEAASIPIRDRLLTSLSTSDDMECNLSTFMSEMRRAAYVLDSLSPRSLVILDELGRGTSTIDGSALSYAVAEALLSARALSFFVTHYRLLILSPDQHQNGGLSKFYGNVKHIHMSAVLTEDTRQLSFMHRVQEGPSAITSGYGIALAADVGFPEDVIVDAERVKCLLEAQEE 779 I V E + REV I + H L D+ ++ ETI LL +P EILL + ++ ++L Q+I + C V ++R YFDQ +GA+ +++++M+ LD L +Y + S C++KY+ V + +K + L++D ++V LEL+ A++ S ++SL I+ T+T VG + L+ +L P +D TI GR +V L+ P + L L L+ ++A + +V ++ + ++V LK L LQ +D + LL F +I ++++I ++ +++A+ ++Q FAV +GL G LD+ R TF+ ++ I+ Y +++ +++ HS SRGY+LS+ + D+PP+F + K + CTT++ +SL+ A E + L+ +++ LL +R H SL+ VE IA LDM+LSFA+LV +S P+T P ++ E G L++ QGRH ++ + FVPND VV+G N SGK+ +KT+A+I VLA IGC+VPA ASI +RDRL T TSDDM+ N STF EM+ A++LD+ + RSLV++DELGRGTS +G A++++V+E+L+ A F TH+ H LS+ Y + + H+ A T D L F +++++GP+ + GYG+ +A G P+ V A + + +EE Sbjct: 48 IAVVAEGKCREVGITGIDISAPHELLISNMVDTHTFMETISLLDAYQPDEILLVETNKARSLHQEI-----RKHFKNSMCRIVPIARKYFDQAKGADDLKRIAMNCLDMSLLKNYIVMGSVACMVKYVEFIQGVYIAQKTIKAVVNTA-SPVLLMDYNTVSSLELMRGAKSGSTQQSLVSRIDYTQTSVGKRLLRTTILRPNSDLETINGRQQVVGTLLDH--PSTFFDAREILPELPDLEILMAQLVIVPKLATTRVFEQGVASIVALKSTLDALPRLKTCLQSIDSNSTLL----------------------------KAIVSSLQHEEFRQIQDSIRKVIDPNSHWKKSARHMKIQGSFAVKSGLDGKLDLTRSTFVDIMDAIHQQVVEYQEKYAF-NVKLNHSASRGYHLSIANLRQDIPPMFEECVKFNKSIACTTKQFSSLNSRATECIQEVYALSYGMIQ-KLLDEIRPHAASLYSMVENIATLDMLLSFANLVALSPADQPYTCPEVT-------EHGCLSINQGRHSLIETMMQDQPFVPNDTHLDVVVTFNVVTGPNCSGKSTHLKTVAVITVLAHIGCYVPAVEASIALRDRLFTRFGTSDDMQENASTFTVEMQETAFILDNCTCRSLVLMDELGRGTSNEEGFAIAWSVSESLMKKGAFCLFATHF---------HGLRELSELYPSCSNYHLQAT-TTDKNILRFQYKLKDGPTELRHGYGLMMAKVCGLPKSVCELASSLHPTVALREE 757
BLAST of NO13G01200 vs. NCBI_GenBank
Match: XP_009827974.1 (hypothetical protein, variant 3 [Aphanomyces astaci] >ETV82305.1 hypothetical protein, variant 3 [Aphanomyces astaci]) HSP 1 Score: 342.4 bits (877), Expect = 4.000e-90 Identity = 242/765 (31.63%), Postives = 398/765 (52.03%), Query Frame = 0 Query: 23 IVCVVENRGREVAIATMSPLRTHVLQTHVCQDSQSYAETIDLLLELRPREILLHDGSRKKTLAQKISLLSQHPEVRARSCLPVFVSRNYFDQDRGAELVRKLSMHTLDQELFLSYTFLASAHCLLKYMGSTFAVRFPPRCLKVLSGYGYGGRLVIDRHSVKDLELVSNARTASQKESLFGCINKTKTDVGGKELKKNLLAPLTDRTTIEGRLDLVEFLIAQGGPEVINSLQTALGCLTALDRMLAGIAVVEVKEDVTSAKKMIHTVVLLKMF------LTQALQLVDELAQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPAFAEISALLQEMISESTVHERNAKTRRLQECFAVSAGLCGLLDVARKTFLQSVEDIYALASTYAKEHGLPELRMLHSTSRGYYLSLPSSLVDLPPLFIQASVVKKQLHCTTQELASLSRAADESANQCVLLTCAVLRDTLLGRVREHVESLFKAVEAIALLDMMLSFADLV-VSDELGPWTRPIISGGGEGGREDGALAVKQGRHPVVCHYVPG--FVPNDVFAGRFGNVVVVSGVNGSGKTVFVKTLALIVVLAQIGCFVPAEAASIPIRDRLLTSLSTSDDMECNLSTFMSEMRRAAYVLDSLSPRSLVILDELGRGTSTIDGSALSYAVAEALLSARALSFFVTHYRLLILSPDQHQNGGLSKFYGNVKHIHMSAVLTEDTRQLSFMHRVQEGPSAITSGYGIALAADVGFPEDVIVDAERVKCLLEAQEE 779 I V E + REV I + H L D+ ++ ETI LL +P EILL + ++ ++L Q+I + C V ++R YFDQ +GA+ +++++M+ LD L +Y + S C++KY+ V + +K + L++D ++V LEL+ A++ S ++SL I+ T+T VG + L+ +L P +D TI GR +V L+ P + L L L+ ++A + +V ++ + ++V LK L LQ +D + LL F +I ++++I ++ +++A+ ++Q FAV +GL G LD+ R TF+ ++ I+ Y +++ +++ HS SRGY+LS+ + D+PP+F + K + CTT++ +SL+ A E + L+ +++ LL +R H SL+ VE IA LDM+LSFA+LV +S P+T P ++ E G L++ QGRH ++ + FVPND VV+G N SGK+ +KT+A+I VLA IGC+VPA ASI +RDRL T TSDDM+ N STF EM+ A++LD+ + RSLV++DELGRGTS +G A++++V+E+L+ A F TH+ H LS+ Y + + H+ A T D L F +++++GP+ + GYG+ +A G P+ V A + + +EE Sbjct: 48 IAVVAEGKCREVGITGIDISAPHELLISNMVDTHTFMETISLLDAYQPDEILLVETNKARSLHQEI-----RKHFKNSMCRIVPIARKYFDQAKGADDLKRIAMNCLDMSLLKNYIVMGSVACMVKYVEFIQGVYIAQKTIKAVVNTA-SPVLLMDYNTVSSLELMRGAKSGSTQQSLVSRIDYTQTSVGKRLLRTTILRPNSDLETINGRQQVVGTLLDH--PSTFFDAREILPELPDLEILMAQLVIVPKLATTRVFEQGVASIVALKSTLDALPRLKTCLQSIDSNSTLL----------------------------KAIVSSLQHEEFRQIQDSIRKVIDPNSHWKKSARHMKIQGSFAVKSGLDGKLDLTRSTFVDIMDAIHQQVVEYQEKYAF-NVKLNHSASRGYHLSIANLRQDIPPMFEECVKFNKSIACTTKQFSSLNSRATECIQEVYALSYGMIQ-KLLDEIRPHAASLYSMVENIATLDMLLSFANLVALSPADQPYTCPEVT-------EHGCLSINQGRHSLIETMMQDQPFVPNDTHLDVVVTFNVVTGPNCSGKSTHLKTVAVITVLAHIGCYVPAVEASIALRDRLFTRFGTSDDMQENASTFTVEMQETAFILDNCTCRSLVLMDELGRGTSNEEGFAIAWSVSESLMKKGAFCLFATHF---------HGLRELSELYPSCSNYHLQAT-TTDKNILRFQYKLKDGPTELRHGYGLMMAKVCGLPKSVCELASSLHPTVALREE 757
BLAST of NO13G01200 vs. NCBI_GenBank
Match: XP_008892044.1 (hypothetical protein PPTG_02616 [Phytophthora parasitica INRA-310] >ETI49723.1 hypothetical protein F443_06517 [Phytophthora parasitica P1569] >ETN22820.1 hypothetical protein PPTG_02616 [Phytophthora parasitica INRA-310] >ETO78437.1 hypothetical protein F444_06583 [Phytophthora parasitica P1976]) HSP 1 Score: 342.0 bits (876), Expect = 5.300e-90 Identity = 233/765 (30.46%), Postives = 392/765 (51.24%), Query Frame = 0 Query: 13 ATVEDEQDDLIVCVVENRGREVAIATMSPLRTHVLQTHVCQDSQSYAETIDLLLELRPREILLHDGSRKKTLAQKISLLSQHPEVRARSCLPVFVSRNYFDQDRGAELVRKLSMHTLDQELFLSYTFLASAHCLLKYMGSTFAVRFPPRCLKVLSGYGYGGRLVIDRHSVKDLELVSNARTASQKESLFGCINKTKTDVGGKELKKNLLAPLTDRTTI------EGRLDLVEFLIAQGGPEVINSLQTALGCLTALDRMLAGIAVVEVKEDVTSAKKMIHTVVLLKMFLTQALQLVDELAQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPAFAEISALLQEMISESTVHERNAKTRRLQECFAVSAGLCGLLDVARKTFLQSVEDIYALASTYAKEHGLPELRMLHSTSRGYYLSLPSSLVDLPPLFIQASVVKKQLHCTTQELASLSRAADESANQCVLLTCAVLRDTLLGRVREHVESLFKAVEAIALLDMMLSFADLV-VSDELGPWTRPIISGGGEGGREDGALAVKQGRHPVVCHYVP--GFVPNDVFAGRFGNVVVVSGVNGSGKTVFVKTLALIVVLAQIGCFVPAEAASIPIRDRLLTSLSTSDDMECNLSTFMSEMRRAAYVLDSLSPRSLVILDELGRGTSTIDGSALSYAVAEALLSARALSFFVTHYRLLILSPDQHQNGGLSKFYGNVKHIHMSAVLTEDTRQLSFMHRVQEGPSAITSGYGIALAADVGFPEDVIVDAER 769 A +E LI V ENR RE+ I + + + L DS SY +T+ LL +P E+L+ + S+ + ++IS C V ++R YFDQ +GAE ++++ + +D + +Y +AS C++KY+ V + +KV+ +L++D+ +V LELV R + +SL +N T+T G + L+ +L P T+ + R ++V + P + L LDR+L + V ++ I +V+ LK L +LV L F I ++ ++++ +A +R+QECFAV AG+ G+LDVAR+T+L ++E I+ + Y + G+P +R+ ++ RGY+L++P + DLP FI+ K + C+T+ L SL+ E+ L+ V++ LL ++R ++ VE+IALLDM+LSF ++V +S P+TRPI++ E G + +K+GRHP+V + ++P+D F +++G N +GK+ +++ ALI ++AQ+GC+VPA ASIPIRDR+ T TSDDME N STF EM A++L++ + +SLV++DELGRGT+ +G+A+++++ E L+ + + F THY HQ L++ Y + HM +T + F + +++GP + YGI AA G P ++I +AER Sbjct: 56 AELESRSSFLIAAVAENRAREIGICAIDLVSPYELLLWTVIDSHSYVDTVALLKAYQPVEVLVVETSKSGKVNEEIS-----KRFTGSKCRVVPLARKYFDQTKGAEDIKRVMANNVDINIGRNYVVMASVACVMKYIEYIQGVYIAEKSMKVVLSPS-TRKLLMDQATVSSLELVQGTRGRNDNQSLCKMLNNTQTSAGNRLLRSTMLQPTCHLKTMYPSAYNQARQEVVGIFL--DNPAWFFDVMEELSGFVDLDRLLNQLVFVPKVITPRVSRIAIGSVIALKHTLECLPRLVSSL------------------ETTSIKLDQPCPLLDSVIQSLRDEQFTWIKEDIERVVNDRVKVCTSAAQKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEVVHMYKENLGIP-IRINYTARRGYHLAVPVNAKDLPASFIERVTTKTVICCSTKALVSLNVRLKEALTAVYKLSNDVIQQ-LLDKIRPRASTMHAMVESIALLDMLLSFVNVVALSPPDQPYTRPIVT-------EHGNMIIKKGRHPLVERVLKDRAYIPSDSFFDPLSTFHIITGPNCAGKSTYLRATALITIMAQMGCYVPASEASIPIRDRICTRFGTSDDMEENASTFAVEMTETAFILEACTSKSLVLIDELGRGTANDEGAAIAWSIGEELIERGSYTCFATHY---------HQLNRLAQLYPRCRCYHMGT--ESNTNSVHFRYVLKDGPFPSSGMYGIKTAAQSGLPAELIREAER 774 The following BLAST results are available for this feature:
BLAST of NO13G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01200 ID=NO13G01200|Name=NO13G01200|organism=Nannochloropsis oceanica|type=gene|length=3727bpback to top protein sequence of NO13G01200.1 >NO13G01200.1-protein ID=NO13G01200.1-protein|Name=NO13G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=870bpback to top Synonyms
Publications
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