NO13G00930, NO13G00930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00930 vs. NCBI_GenBank
Match: EWM21760.1 (TB2/DP1/HVA22-related protein [Nannochloropsis gaditana]) HSP 1 Score: 392.1 bits (1006), Expect = 2.100e-105 Identity = 235/391 (60.10%), Postives = 284/391 (72.63%), Query Frame = 0 Query: 14 TAGGDHGPTLVQKLVLLKDNMLKMVDLKMEKHPALTLRPQLLELEKKTNVPAPALFIIGSSLSVLILVLILSMEGVALAAGFTYPLLGSLKAIKMSEPVVMKFFIKYFLLYSLLNLSDTYLPIFPSLPLYYIFKTLFLLWAFNPKTQGANIIYTALRPFLLPRLGIAIRAATAEASGQGGQHLKKSKKGEKAGGELVTAMVGTEGIXXXXXXXXXXXXXXXXXXXXXPTITLRIELAARGLEMPAEPERLDTLCQLRILPAGLKRGXXXXXXXXXXXXXKAERKPALDEGQWYKSRLHTSQPQDAPDWRNDPQFLRVPTLDDNVLEVLVVNKMSWKDQPLGRVRLPLKGLTFPVDTTLPLEAPHKAELAEEGAGGDDGEEGGMQGELEIHL 405 ++GG G T +Q+L ++KDN+LK V+ +ME++P+LT+R LL++EKK NVPAPALFI+GSS VL+LVL++SMEGVAL G YPLLG+LKAIK+ E V+KFFI+YFLL++ LNL +T+LP+ LPLYY+ K LFL WAFNPKTQGA ++Y LRP LLP LGIA+ A+ AE S GG G XXXXXXXXXXXXXXXXX +I LRIELAARGLE PAEPERLDTLCQLRILP R+ ALDEGQWYKSR++T+ PQDAPDWR+DPQFLRVPT +DNVLEVL+VNKMSW+D PLGRVRLPL+GL+FP++TTLPLE P E E GG++ E G +QGELEIHL Sbjct: 2 SSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETFLPL-SRLPLYYLGKLLFLAWAFNPKTQGARLVYGTLRPLLLPHLGIALGASGAEQSRPGG---------------------GXXXXXXXXXXXXXXXXXXXXXSGEGASIHLRIELAARGLEKPAEPERLDTLCQLRILP--------------MTGGHSEVRRAALDEGQWYKSRINTAPPQDAPDWRHDPQFLRVPTTEDNVLEVLIVNKMSWRDHPLGRVRLPLRGLSFPIETTLPLEDPFGDEREE---GGEENERGEVQGELEIHL 353
BLAST of NO13G00930 vs. NCBI_GenBank
Match: XP_005854717.1 (peroxin-1, partial [Nannochloropsis gaditana CCMP526] >EKU21644.1 peroxin-1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 369.4 bits (947), Expect = 1.400e-98 Identity = 220/363 (60.61%), Postives = 267/363 (73.55%), Query Frame = 0 Query: 11 SSSTAGGDHGPTLVQKLVLLKDNMLKMVDLKMEKHPALTLRPQLLELEKKTNVPAPALFIIGSSLSVLILVLILSMEGVALAAGFTYPLLGSLKAIKMSEPVVMKFFIKYFLLYSLLNLSDTYLPIFPSLPLYYIFKTLFLLWAFNPKTQGANIIYTALRPFLLPRLGIAIRAATAEASGQGGQHLKKSKKGEKAGGELVTAMVGTEGIXXXXXXXXXXXXXXXXXXXXXPTITLRIELAARGLEMPAEPERLDTLCQLRILPAGLKRGXXXXXXXXXXXXXKAERKPALDEGQWYKSRLHTSQPQDAPDWRNDPQFLRVPTLDDNVLEVLVVNKMSWKDQPLGRVRLPLKGLTFPVDTTLPL 374 +S ++GG G T +Q+L ++KDN+LK V+ +ME++P+LT+R LL++EKK NVPAPALFI+GSS VL+LVL++SMEGVAL G YPLLG+LKAIK+ E V+KFFI+YFLL++ LNL +T+LP+ LPLYY+ K LFL WAFNPKTQGA ++Y LRP LLP LGIA+ A+ AE S GG G XXXXXXXXXXXXXXXXX +I LRIELAARGLE PAEPERLDTLCQLRILP R+ ALDEGQWYKSR++T+ PQDAPDWR+DPQFLRVPT +DNVLEVL+VNKMSW+D PLGRVRLPL+GL+FP++TTLPL Sbjct: 1334 TSMSSGGAQGQTPMQRLTIMKDNVLKKVERQMEQYPSLTMRSSLLDMEKKVNVPAPALFILGSSSLVLLLVLLVSMEGVALLVGLAYPLLGALKAIKVQEAHVIKFFIQYFLLFNALNLLETFLPL-SRLPLYYLGKLLFLAWAFNPKTQGARLVYGTLRPLLLPHLGIALGASGAEQSRPGG---------------------GXXXXXXXXXXXXXXXXXXXXXSGEGASIHLRIELAARGLEKPAEPERLDTLCQLRILP--------------MTGGHSEVRRAALDEGQWYKSRINTAPPQDAPDWRHDPQFLRVPTTEDNVLEVLIVNKMSWRDHPLGRVRLPLRGLSFPIETTLPL 1660
BLAST of NO13G00930 vs. NCBI_GenBank
Match: OWZ23307.1 (putative membrane protein [Phytophthora megakarya]) HSP 1 Score: 76.3 bits (186), Expect = 2.500e-10 Identity = 48/147 (32.65%), Postives = 86/147 (58.50%), Query Frame = 0 Query: 34 MLKMVDLKMEKHPALTLRPQLLELEKKTNVPAPALFIIGSSLSVLILVLILSMEGVALAAGFTYPLLGSLKAIKMSEPVVMKFFIKYFLLYSLLNLSDTYLPIFPS-LPLYYIFKTLFLLWAFNPKTQGANIIY-TALRPFLLPRLG 179 M K+++ K + L +++ELEK+T V +F +G+ L+ ++L ++ E V GF YP S KAI ++ Y+++Y+ NL+++ +F S +P Y+ FK FL+W ++P TQG+N+IY T ++P++ P +G Sbjct: 1 MDKLLEYKEKISAKLERYEKVVELEKQTGVDKFYIFCVGALLAGILLFVVGGEELVVGLVGFIYPAYMSFKAINTPGTGDDTQWLTYWVVYAFFNLTESITDLFLSWIPFYFFFKIAFLVWTYHPSTQGSNVIYNTLIKPYVAPHVG 147
BLAST of NO13G00930 vs. NCBI_GenBank
Match: XP_002899586.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY61946.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 73.9 bits (180), Expect = 1.300e-9 Identity = 47/147 (31.97%), Postives = 85/147 (57.82%), Query Frame = 0 Query: 34 MLKMVDLKMEKHPALTLRPQLLELEKKTNVPAPALFIIGSSLSVLILVLILSMEGVALAAGFTYPLLGSLKAIKMSEPVVMKFFIKYFLLYSLLNLSDTYLPIFPS-LPLYYIFKTLFLLWAFNPKTQGANIIY-TALRPFLLPRLG 179 M K+++ K + L +++ELEK+T V +F +G+ L+ ++L ++ E V GF YP S KAI ++ Y+++YS NL+++ + S +P Y+ K FL+W+++P TQG+N+IY T ++P++ P +G Sbjct: 1 MDKLLEYKEKISAKLERYDKIVELEKQTGVDKFYIFCVGALLAGILLFVVGGEELVVGLVGFIYPAYMSFKAINTPGTTDDTQWLTYWVVYSFFNLTESITDLVLSWVPFYFFIKIAFLVWSYHPSTQGSNVIYNTLIKPYVAPHVG 147
BLAST of NO13G00930 vs. NCBI_GenBank
Match: POM68017.1 (ER membrane protein DP1/Yop1 [Phytophthora palmivora var. palmivora] >POM75375.1 ER membrane protein DP1/Yop1 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 73.6 bits (179), Expect = 1.600e-9 Identity = 47/147 (31.97%), Postives = 85/147 (57.82%), Query Frame = 0 Query: 34 MLKMVDLKMEKHPALTLRPQLLELEKKTNVPAPALFIIGSSLSVLILVLILSMEGVALAAGFTYPLLGSLKAIKMSEPVVMKFFIKYFLLYSLLNLSDTYLPIFPS-LPLYYIFKTLFLLWAFNPKTQGANIIY-TALRPFLLPRLG 179 M K+++ K + L +++ELEK+T V +F +G+ L+ ++L ++ E V GF YP S KAI ++ Y+++Y+ NL+++ + S +P Y+ FK FL+W ++P TQG+N+IY T ++P++ P +G Sbjct: 1 MDKLLEYKEKISAKLERYEKVVELEKQTGVDKFYIFCVGALLAGILLFVVGGEELVVGLVGFIYPAYMSFKAINTPGTGDDTQWLTYWVVYAFFNLTESITDLILSWIPFYFFFKIAFLVWTYHPTTQGSNVIYNTLIKPYVAPHVG 147
BLAST of NO13G00930 vs. NCBI_GenBank
Match: CCA19585.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 72.8 bits (177), Expect = 2.800e-9 Identity = 45/126 (35.71%), Postives = 73/126 (57.94%), Query Frame = 0 Query: 52 PQLLELEKKTNVPAPALFIIGSSLSVLILVLILSMEGVALAAGFTYPLLGSLKAIKMSEPVVMKFFIKYFLLYSLLNLSDTYLP-IFPSLPLYYIFKTLFLLWAFNPKTQGANIIYTA-LRPFLLP 176 P+++ELEKKT + LF+ S++++ +L LI + GF YP S KA K ++ Y+++Y++ L + L +F SLP+Y+ FK FL+W F P T GA +IY A ++P++ P Sbjct: 19 PKIVELEKKTGIDKFYLFVSISTVALALLYLIGGQPLMVKLVGFIYPSYESFKAADKLTSKSSKTWLSYWIVYAVFCLLEPVLDYVFSSLPMYFFFKIGFLVWCFLPSTMGAQVIYQAVMKPYIAP 144
BLAST of NO13G00930 vs. NCBI_GenBank
Match: XP_009526688.1 (hypothetical protein PHYSODRAFT_354597 [Phytophthora sojae] >EGZ17630.1 hypothetical protein PHYSODRAFT_354597 [Phytophthora sojae]) HSP 1 Score: 71.6 bits (174), Expect = 6.200e-9 Identity = 47/147 (31.97%), Postives = 85/147 (57.82%), Query Frame = 0 Query: 34 MLKMVDLKMEKHPALTLRPQLLELEKKTNVPAPALFIIGSSLSVLILVLILSMEGVALAAGFTYPLLGSLKAIKMSEPVVMKFFIKYFLLYSLLNLSDTYLPIFPS-LPLYYIFKTLFLLWAFNPKTQGANIIYTAL-RPFLLPRLG 179 M K+++ K + L +++ELEK+T V +F +G+ L+ ++L ++ E V GF YP S KAI ++ Y+++Y+ NL+++ + S +P Y+ FK FL+W+++P TQG+ IIY +L +P++ P +G Sbjct: 1 MDKVLEYKEKISAKLERYEKIVELEKQTGVDKFYIFCVGALLAGILLFVVGGEELVVGLVGFIYPAYMSFKAINTPGTGDDTQWLTYWVVYAFFNLTESITDLVLSWIPFYFFFKIAFLVWSYHPSTQGSTIIYNSLIKPYVAPHVG 147
BLAST of NO13G00930 vs. NCBI_GenBank
Match: ETI30790.1 (hypothetical protein F443_22117 [Phytophthora parasitica P1569] >ETK71184.1 hypothetical protein L915_21513 [Phytophthora parasitica] >ETL24635.1 hypothetical protein L916_21377 [Phytophthora parasitica] >ETL77844.1 hypothetical protein L917_21236 [Phytophthora parasitica] >ETM31098.1 hypothetical protein L914_21245 [Phytophthora parasitica] >ETO74486.1 hypothetical protein F444_09821 [Phytophthora parasitica P1976] >ETP00580.1 hypothetical protein F441_22011 [Phytophthora parasitica CJ01A1] >ETP28748.1 hypothetical protein F442_21981 [Phytophthora parasitica P10297] >KUF81343.1 Receptor expression-enhancing protein 5 [Phytophthora nicotianae]) HSP 1 Score: 71.6 bits (174), Expect = 6.200e-9 Identity = 47/147 (31.97%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 34 MLKMVDLKMEKHPALTLRPQLLELEKKTNVPAPALFIIGSSLSVLILVLILSMEGVALAAGFTYPLLGSLKAIKMSEPVVMKFFIKYFLLYSLLNLSDTYLPIFPS-LPLYYIFKTLFLLWAFNPKTQGANIIYTAL-RPFLLPRLG 179 M K+++ K + L +++ELEK+T V +F +G+ L+ ++L ++ E V GF YP S KAI ++ Y+++YS NL+++ + S +P Y+ K FL+W ++P TQG+N+IY +L +P++ P +G Sbjct: 1 MDKLMEYKEKISAKLERYDKIVELEKQTGVDKFYIFCVGALLAGILLFVVGGEELVVGLVGFIYPAYMSFKAINTPGTTDDTQWLTYWVVYSFFNLTESVTDLVLSWVPFYFFIKIGFLVWCYHPSTQGSNLIYNSLIKPYVAPHVG 147
BLAST of NO13G00930 vs. NCBI_GenBank
Match: CCI42223.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 66.6 bits (161), Expect = 2.000e-7 Identity = 40/124 (32.26%), Postives = 70/124 (56.45%), Query Frame = 0 Query: 52 PQLLELEKKTNVPAPALFIIGSSLSVLILVLILSMEGVALAAGFTYPLLGSLKAIKMSEPVVMKFFIKYFLLYSLLNLSDTYLP-IFPSLPLYYIFKTLFLLWAFNPKTQGANIIYTA-LRPFL 174 P+++ELEKKT + +F+ S++++ +L I + GF YP S +A K ++ Y+++Y++ L + L +F SLP+Y+ K FL+W F P T GA +IY A ++P++ Sbjct: 19 PKIVELEKKTGIDKFYIFVTISTIALALLYAIGGQPLMVKLVGFVYPSYQSFRAADKVSSTSSKVWLAYWIVYAVFCLIEPVLDYVFSSLPMYFFVKVGFLVWCFLPSTMGAQVIYQAVMKPYI 142
BLAST of NO13G00930 vs. NCBI_GenBank
Match: CCA27992.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 65.9 bits (159), Expect = 3.400e-7 Identity = 43/145 (29.66%), Postives = 81/145 (55.86%), Query Frame = 0 Query: 36 KMVDLKMEKHPALTLRPQLLELEKKTNVPAPALFIIGSSLSVLILVLILSMEGVALAAGFTYPLLGSLKAIKMSEPVVMKFFIKYFLLYSLLNLSDTYLPIFPS-LPLYYIFKTLFLLWAFNPKTQGANIIY-TALRPFLLPRLG 179 +M+ ++EK+ +L ELE+KT + +F G + + L +I + GF YP S KA+ S+ ++ Y+++++L N+++ + S +PLY++ KT FL+W ++P T GAN+IY ++P++ P +G Sbjct: 9 EMISTRLEKY------SKLRELEEKTGIEKFYIFSAGLLVLGVFLFVIGGARLIIKLLGFLYPAYQSFKALSSSDVKDDTQWLTYWVVFALYNITEPITDLLLSWIPLYFLLKTGFLVWCYHPNTLGANVIYHNVIKPYIAPHVG 147 The following BLAST results are available for this feature:
BLAST of NO13G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00930 ID=NO13G00930|Name=NO13G00930|organism=Nannochloropsis oceanica|type=gene|length=1764bpback to top protein sequence of NO13G00930.1 >NO13G00930.1-protein ID=NO13G00930.1-protein|Name=NO13G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=408bpback to top Synonyms
Publications
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