NO13G00500, NO13G00500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO13G00500 vs. NCBI_GenBank
Match: EWM22888.1 (hypothetical protein Naga_100160g4 [Nannochloropsis gaditana]) HSP 1 Score: 428.3 bits (1100), Expect = 6.400e-116 Identity = 284/528 (53.79%), Postives = 324/528 (61.36%), Query Frame = 0 Query: 390 LKELVEDLERQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQYRATDERDRRKWAEVLEESCVVTMPITPYRFFPRREVQNGLRVIQGIDAVMADASSLRLMVEAVRWSSLAIASSSCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTVHFGEGGGMSMSAPVTIMYEVSPEDIIMSKDTLMCRWTMRSESSNYIPSSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDARSLFVGEGGRSNKDPSSGKKCNGGTGAGGEREDGREGGMVNYNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIVELGVEGMLYCRFNDQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGACQRAATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEGQPLDLLEGSTLAPGTGFMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHANAGXXXXXXXXXXXXXVPTPTHILGILRKV 918 LKELV+DLERQRKEE +AKD+ ++A+EEV HRNTVV FL RA DERDRRKWA+VL+E CV+T+PITPYRFFPR EV NG+RV+QG+DAVMADASSLRL++EAV WS+L A S + E G + PV + Y V+ +DIIMSKDTLMCRWT+R+ S SS P XXXXXXXXX XXXXXXXXXXXXXX G P +GK G GA GE G E G + + +E GVEGMLYCRFN+QD+LTSVE++FDVMTVMQQLQRA+G+ C++LIVPNSLEGACQRAATARVLV+AEAPYPVLHVNEHWT+LRGQTQVDVEGQPLDLLEG++ APG+ FMV EVMGGRPASCIMLVFKACRQAFTGYLQLFPLHA G PTHILGILRKV Sbjct: 415 LKELVDDLERQRKEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHNGVRVVQGLDAVMADASSLRLLMEAVGWSALERAHSPSSAPPSFVSSLNASSPSGWKIGAGVEGDAADRDIKE--------EHGARAGFPPVRLEYLVNAQDIIMSKDTLMCRWTLRTSRSR---SSFPSAHVSSRPPSSRPDXXXXXXXXXRHXXXXXXXXXXXXXXXXXXXXXXXXTGPXXXXPQAGK---GSVGAHGE---GEEAGNTS----------NLPVDRSNSAGKYTGTPLQQGPRKNGRAIQGVSRSKRASQQRDSDVLDKLEFGVEGMLYCRFNEQDKLTSVEMVFDVMTVMQQLQRAAGIPCEYLIVPNSLEGACQRAATARVLVRAEAPYPVLHVNEHWTNLRGQTQVDVEGQPLDLLEGASEAPGSRFMVDEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHAAPGGGRGGERGRL-----APTHILGILRKV 910
BLAST of NO13G00500 vs. NCBI_GenBank
Match: XP_005855046.1 (hypothetical protein NGA_2048610, partial [Nannochloropsis gaditana CCMP526] >EKU21313.1 hypothetical protein NGA_2048610, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 129.4 bits (324), Expect = 6.200e-26 Identity = 62/88 (70.45%), Postives = 75/88 (85.23%), Query Frame = 0 Query: 390 LKELVEDLERQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQYRATDERDRRKWAEVLEESCVVTMPITPYRFFPRREVQNGLRVIQG 478 LKELV+DLERQR+EE +AKD+ ++A+EEV HRNTVV FL RA DERDRRKWA+VL+E CV+T+PITPYRFFPR EV G+RV+QG Sbjct: 14 LKELVDDLERQREEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHKGVRVVQG 101
BLAST of NO13G00500 vs. NCBI_GenBank
Match: XP_005852796.1 (hypothetical protein NGA_2048620, partial [Nannochloropsis gaditana CCMP526] >EKU23036.1 hypothetical protein NGA_2048620, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 129.4 bits (324), Expect = 6.200e-26 Identity = 62/88 (70.45%), Postives = 75/88 (85.23%), Query Frame = 0 Query: 390 LKELVEDLERQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQYRATDERDRRKWAEVLEESCVVTMPITPYRFFPRREVQNGLRVIQG 478 LKELV+DLERQR+EE +AKD+ ++A+EEV HRNTVV FL RA DERDRRKWA+VL+E CV+T+PITPYRFFPR EV G+RV+QG Sbjct: 12 LKELVDDLERQREEEDRAKDVLASRALEEVHHRNTVVHSFLHCRARDERDRRKWAQVLDEDCVLTLPITPYRFFPRGEVHKGVRVVQG 99
BLAST of NO13G00500 vs. NCBI_GenBank
Match: CBN74261.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 100.1 bits (248), Expect = 4.000e-17 Identity = 119/533 (22.33%), Postives = 195/533 (36.59%), Query Frame = 0 Query: 390 LKELVEDLE----RQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQYRATDERDRRKWAEVLEESCVVTMPITPYRFFPRREVQNGLRVIQGIDAVMADASSLRLMVEAVRWSSLAIASSSCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTVHFGEGGGMSMSAPVTIMYEVSPEDIIMSKDTLMCRWTMRSESSNYIPSSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDARSLFVGEGGRSNKDPSSGKKCNGGTGAGGEREDGREGGMVNYNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIVELGVEGMLYCRF-NDQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGACQRAATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEGQPLDLLEG-STLAPGTGFMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHANAGXXXXXXXXXXXXXVPTPTHILGILRK 917 L+E VE L+ R + KA++L T +E + +N ++ F+++R + ++R KWAE+++E +T+PITPYR+F R V N RV++GID VM D SL ++VE++ +L + + G G G V ++ E++ D++ S +T MC + +R+ ++ V G R E GML +F L ++E +FDV ++MQQLQ+ G + +VPN+ GACQ + ARV++ A P+ V+ N+ WT L G +Q D+ GQ L ++G T A G + E+ GR AS ++ +K+ F YL+++PL + T THILG+L++ Sbjct: 31 LQEQVEKLKQLHARGKXXXXKARELSTR--MEVLKRQN--LRTFMKFRCKNVKNREKWAEIVDERVTMTLPITPYRWFNGRCVFNDSRVLRGIDDVMTDNGSLAVLVESLGCGTL-----------------------------------------PWRQEMEKGHGHG------VELVCEMADNDMLTSHNTAMCSFVLRTTNA------------------------------------------------------VKHGARR------------------------------------------------------------------------------------------EWRCRGMLSAKFIAGSAMLVAIEHVFDVTSLMQQLQKVVGEEKEMPVVPNTTRGACQPSNEARVIMTATPPHTVVCCNQAWTKLCGYSQEDIRGQTLKAIQGPRTDAGGLAALNREIERGRAASAVLPNYKSDGSEFLNYLRVYPLVGDGRG--------------TVTHILGVLQE 354
BLAST of NO13G00500 vs. NCBI_GenBank
Match: OEU22021.1 (hypothetical protein FRACYDRAFT_267125 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 95.9 bits (237), Expect = 7.500e-16 Identity = 54/143 (37.76%), Postives = 81/143 (56.64%), Query Frame = 0 Query: 745 VEGMLYCRFNDQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGACQRAAT-ARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEGQP-LDLLEGSTLAPGTGFMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPL 886 V GML F+ ++L S+E++FD M MQQL A+G + + ++P SLE A ARV+ +A +PY V+HVNE WT L TQ + EG+P L LL G + G + +V GRPA + + ++F ++ +PL Sbjct: 122 VPGMLRANFSKNNKLLSMELVFDAMGFMQQLDGANGGNINAQVIPGSLEMALVPCPNEARVITEATSPYRVVHVNEQWTRLTSYTQTEAEGKPLLHLLLGDSSGSGADESLEDVTNGRPACSTNIHHRKIGKSFVDFMCSYPL 264
BLAST of NO13G00500 vs. NCBI_GenBank
Match: XP_002293039.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89500.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 92.8 bits (229), Expect = 6.400e-15 Identity = 55/154 (35.71%), Postives = 84/154 (54.55%), Query Frame = 0 Query: 740 IVELGVEGMLYCRFNDQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGA-CQRAATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEGQPLDLLEGSTLAPGTG-------FMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPL 886 + E + GML F+ ++L +VE++FD M QQL+RASG I+PNSLE A + ARV+ A+APYP++ VNE WT + G TQ+D EG+ L +L G P G ++ V G+ A + + + + F ++ +PL Sbjct: 848 LAECVMPGMLRASFSATNKLKNVEMIFDAMGFCQQLERASGNEGMAQIIPNSLEMALTPNSEEARVITLAQAPYPIVSVNESWTRITGFTQLDAEGKDLSILHGERTDPDAGRRSGFPAHDMASVSQGQCACSVNVHYDINGREFLNFMSSYPL 1001 HSP 2 Score: 81.3 bits (199), Expect = 1.900e-11 Identity = 41/106 (38.68%), Postives = 65/106 (61.32%), Query Frame = 0 Query: 390 LKELVEDLERQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQYRATDERDRRKWAEVLEESCVVTMPITPYRFFPRREVQNGLRVIQGIDAVMADASSLRLMVEAV 496 LKELV+ L+ +R E+S+ + + E D R V+ FL Y A E D KW +LEE + P+TPYR F R E+ G R+++G++A++ DA+S+ +M+E + Sbjct: 355 LKELVDGLQAERSEDSRKRRVAVQHLAEIQDIRRKVMHTFLGYHAKFEGDVGKWKTILEEDFWLKQPVTPYRSFRRTEIDKGSRILKGVNAMIGDAASMSVMIETI 460
BLAST of NO13G00500 vs. NCBI_GenBank
Match: GAX23481.1 (hypothetical protein FisN_14Hh349 [Fistulifera solaris]) HSP 1 Score: 90.5 bits (223), Expect = 3.200e-14 Identity = 57/148 (38.51%), Postives = 86/148 (58.11%), Query Frame = 0 Query: 747 GMLYCRFNDQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGA-CQRAATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEGQP-LDLLEG------STLAPG-TGFMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPL 886 GML F+ +++L+S+EI++D M MQQL+RASG I+P SLE A ARV+ AE P+ +++VNE WT + G TQ++VEG+ + LLEG + + PG ++ EV GRPA + + Q F ++ +PL Sbjct: 551 GMLRASFSSRNKLSSIEIVYDAMGFMQQLERASGNEGSAQIIPGSLEMALAPTQLEARVITLAEPPFKIVNVNEAWTRITGYTQMEVEGKEYISLLEGEGTVQEAKVRPGKPHHLLEEVAMGRPACSTNIHYGKDGQDFIEFVCSYPL 698
BLAST of NO13G00500 vs. NCBI_GenBank
Match: GAX13640.1 (hypothetical protein FisN_14Lh349 [Fistulifera solaris]) HSP 1 Score: 89.7 bits (221), Expect = 5.400e-14 Identity = 56/148 (37.84%), Postives = 85/148 (57.43%), Query Frame = 0 Query: 747 GMLYCRFNDQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGA-CQRAATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEGQP-LDLLEG------STLAPG-TGFMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPL 886 GML F+ +++L S+EI++D M MQQL+RASG I+P SLE A ARV+ AE P+ +++VNE WT + G TQ++VEG+ + LLEG + + PG ++ EV GRPA + + + F ++ +PL Sbjct: 551 GMLRASFSSRNKLLSIEIVYDAMGFMQQLERASGNEGSAQIIPGSLEMALAPTHLEARVITLAEPPFKIVNVNEAWTRITGYTQMEVEGKEYISLLEGEGTVQEAKIRPGKPNHLLEEVAMGRPACSTNIHYSKDGRDFIEFVCSYPL 698 HSP 2 Score: 71.6 bits (174), Expect = 1.500e-8 Identity = 40/116 (34.48%), Postives = 66/116 (56.90%), Query Frame = 0 Query: 390 LKELVEDLERQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQYRATDERDRRKWAEVLEESCVVTMPITPYRFFPRREVQNGLRVIQGIDAVMADASSLRLMVEAV-----RWSSL 501 LKELVE L +R EE + + + E + R VV+ FL++ + E D RKW + E++ + P+TPYR F R E++ R +G+ A++ +A+SL +M+E + RW + Sbjct: 142 LKELVEGLHAERIEEVRQRRVAIQHMAEVQNVRRNVVRDFLRFLSKYETDERKWKTLAEDNFCLKQPVTPYRSFRRCEIEKECRCSRGVQAMICEAASLSVMIENIGSRSSRWMQI 257
BLAST of NO13G00500 vs. NCBI_GenBank
Match: XP_002179181.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49004.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 87.0 bits (214), Expect = 3.500e-13 Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = 0 Query: 390 LKELVEDLERQRKEESKAKDLRTNQAIEEVDHRNTVVKKFLQYRATDERDRRKWAEVLEESCVVTMPITPYRFFPRREVQNGLRVIQGIDAVMADASSLRLMVEAV-----RWSSL 501 L+ELVE L +R EE + + + E+ + R VV+ FLQY + E D RKW +LE+ + P+TPYR FPR E++ R+ +GID+++ D +SL +MVE + RW + Sbjct: 224 LRELVEGLHSERTEEVRRRRVAIQHLAEKQNVRKKVVRNFLQYGSNYETDERKWGTILEDDFYLKQPVTPYRSFPRAEIEKECRISRGIDSIINDGASLSVMVEGIGSRSTRWMQM 339
BLAST of NO13G00500 vs. NCBI_GenBank
Match: GAX18390.1 (hypothetical protein FisN_15Lh315 [Fistulifera solaris]) HSP 1 Score: 87.0 bits (214), Expect = 3.500e-13 Identity = 50/151 (33.11%), Postives = 87/151 (57.62%), Query Frame = 0 Query: 742 ELGVEGMLYCRFNDQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGACQRA-ATARVLVKAEAPYPVLHVNEHWTSLRGQTQVDVEG-QPLDLLEGSTLAPG-TGFMVSEVMGGRPASCIMLVFKACRQAFTGYLQLFPLHANA 890 E+ +GML C+FN+ ++T E+MFDVM M QL++A+G S F ++PN+++ CQRA V+ AE PY ++ VN+ W + G + +V G + +L+ S + +M+ E+ RP + ++ K + F ++ LFPL ++ Sbjct: 408 EVVKQGMLCCKFNNAHKITGFELMFDVMAFMLQLKQAAG-SDGFSVIPNTVQ-TCQRAFDKPMVMTLAEPPYTIMQVNQKWEEMTGYSAEEVVGKESCSILQNSDSSTSHLHYMMDEIRYKRPTAAYLINSKKSGELFRHFVLLFPLSTDS 556 The following BLAST results are available for this feature:
BLAST of NO13G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00500 ID=NO13G00500|Name=NO13G00500|organism=Nannochloropsis oceanica|type=gene|length=3714bpback to top protein sequence of NO13G00500.1 >NO13G00500.1-protein ID=NO13G00500.1-protein|Name=NO13G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=999bpback to top Synonyms
Publications
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