NO13G00400, NO13G00400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00400 vs. NCBI_GenBank
Match: XP_005853450.1 (hypothetical protein NGA_0436200, partial [Nannochloropsis gaditana CCMP526] >EKU22911.1 hypothetical protein NGA_0436200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 196.8 bits (499), Expect = 1.900e-46 Identity = 105/210 (50.00%), Postives = 130/210 (61.90%), Query Frame = 0 Query: 21 SPAQIIQNPDGTTAIYWTDFDFKKS--SKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNADE--GLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFN 225 +P QI+++ DGTTAIYW F KS KR F+ V AD CAPE L V A AYLVNATD S C PL P L+VRY L + TCAPTPAP++NP PF + GEGQR Q G+LAPF DRRLSA + + G+ +L +H Q I+ P C++YCS+NG + PF F+WNT T+QCFCC G C L+ +PDFN Sbjct: 9 TPPQIVEDTDGTTAIYWLGIAFTKSKGGKRRFRVKVKADKCAPETLAVDAFAYLVNATDAS--CITPLASPATLKVRY--------SKLKNAATCAPTPAPTINPTQPFVLLGEGQRFSQGGRLAPFQDRRLSAHPGSSKHGGIMALGQAGDRHLQ----SIDTPEACYEYCSLNGGKVVPFLFSWNTVTSQCFCCVGVCTPLVFDPDFN 204
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM20327.1 (hypothetical protein Naga_100406g12, partial [Nannochloropsis gaditana]) HSP 1 Score: 196.8 bits (499), Expect = 1.900e-46 Identity = 108/235 (45.96%), Postives = 138/235 (58.72%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARP-FRMLSPAQIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVL 231 + LP GLSV + RP + +P QI+++ DG TAI W F +K KR F+ V AD CAPE L V A AYL+NATD S C PL +P +++VRY K TCAPTPAP+VNP PF + GEG R Q +LAPF DRRLS + + + RQL I+ P C++YCS+NG E PF F+WN T+QCFCC G C LIV+PD+N Y+ +L Sbjct: 100 LNLPDGLSVERTAIRPSSKPYTPPQIVEDADGVTAISWQGLTFTKRKGGKRRFRVKVKADQCAPETLAVNAFAYLMNATDTS--CITPLANPAIVKVRYLKRNK--------DATCAPTPAPTVNPTQPFVLLGEGLRFSQGERLAPFEDRRLSLHTGINRHEDIFARYHPEDRQLQ--SIDTPEACYEYCSLNGGEEVPFLFSWNIMTSQCFCCAGVCTPLIVDPDYNVYEALL 322
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM20839.1 (secreted protein [Nannochloropsis gaditana]) HSP 1 Score: 195.3 bits (495), Expect = 5.400e-46 Identity = 109/237 (45.99%), Postives = 142/237 (59.92%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARPFRMLS-PAQIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALH--NADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVL 231 ++LP GLSV + RP S P QI+++ DGT+ IYW F +K K F+ V AD+CAPE L V A AYLVNAT +A C PLV+ +++VRY L ++ TCAPTPAPS+NP PF +FG GQR Q G+LAPF +RRLSA N L +LS +H Q I+ P C++YCS+N E +PFFF+WN T QCFCC C + +PD N Y+ +L Sbjct: 95 LKLPNGLSVERTTMRPSSKPSVPLQIVEDSDGTSTIYWLGIAFTKRKGGKLRFRVKVKADECAPETLAVDAFAYLVNAT--AASCITPLVNAAIVKVRY--------SKLDKAATCAPTPAPSINPTQPFVLFGAGQRFSQGGRLAPFQNRRLSARSGMNTHGTLAALSQPRDRHLQ----SIDTPEACYEYCSLNAGEETPFFFSWNIVTRQCFCCVAVCTPFVFDPDSNVYEALL 317
BLAST of NO13G00400 vs. NCBI_GenBank
Match: XP_005853337.1 (hypothetical protein NGA_0718400 [Nannochloropsis gaditana CCMP526] >EKU23024.1 hypothetical protein NGA_0718400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 194.1 bits (492), Expect = 1.200e-45 Identity = 109/231 (47.19%), Postives = 138/231 (59.74%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARP-FRMLSPAQIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALH---NADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFN 225 + LP GLSV + RP + +P QI+++ DG TAI W F +K KR F+ V AD CAPE L V A AYL+NATD S C PL +P +++VRY K TCAPTPAP+VNP PF + GEG R Q +LAPF+ R +LH N EG+ ++ Q RQL I+ P C+ YCS+NG+E PF F+WNT T+QCFCC G C LIV+PD N Sbjct: 69 LNLPDGLSVERTAMRPSSKPYTPPQIVEDADGVTAISWQGLAFTKRKGGKRRFRVKVKADQCAPETLAVDAFAYLMNATDTS--CITPLANPAIVKVRYLKRNK--------DATCAPTPAPTVNPTQPFVLLGEGLRFSQGERLAPFEDRRLSLHTEINRHEGI--IARYHPQDRQLQ--SIDTPEACYVYCSLNGSEEVPFLFSWNTVTSQCFCCAGVCTPLIVDPDSN 285
BLAST of NO13G00400 vs. NCBI_GenBank
Match: XP_005852421.1 (exported nucleotide-binding protein, partial [Nannochloropsis gaditana CCMP526] >EKU23411.1 exported nucleotide-binding protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 187.6 bits (475), Expect = 1.100e-43 Identity = 100/221 (45.25%), Postives = 132/221 (59.73%), Query Frame = 0 Query: 18 RMLSPAQIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALH--NADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGT 234 R L+P QI+ N DG T +YW F +K KR F VV A++CAPE L+V A AYLVN TD S C PL +P +++VRY +K TC PTPAPS+NP PF +FGEGQR Q +LAPF RLS L N E + +L + + Q I++P C++YCS+NG + +P FF+WNT T+QCFCC G C +PD N ++V + T Sbjct: 6 RPLTPPQIVNNADGATTMYWQRLAFIKRKGGKRRFHVVVKANECAPETLEVDASAYLVNTTDSS--CITPLANPALVKVRYSKRQK--------KATCGPTPAPSINPQQPFVLFGEGQRFSQGARLAPFQNRLSMLSSVNRHEDIMALHHLGDRQLQ----SIDSPQACYEYCSMNGGQETP-FFSWNTGTSQCFCCVGVCKPFPFDPDSNVFEVRIPRT 211
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM20247.1 (hypothetical protein Naga_100363g6, partial [Nannochloropsis gaditana]) HSP 1 Score: 187.6 bits (475), Expect = 1.100e-43 Identity = 185/346 (53.47%), Postives = 219/346 (63.29%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARPF-RMLSPAQIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGVIWTQQTNST-QQQWESITSSSDGTKLAAGAHEGFIYTSTD 341 + LP GLSV ++ RP + + +I++N DGTT IYW + F +K KR F+ V ADDCAPE L + A AY VN T A C PL + VRY +K + TCAPTP P+ NPA PF + G GQR Q G+LAPF DRRLS D + Q+RQL I+ P C++YCS+N + +PF F+WNT T QCFCC C I +PD + Y+VV+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + W SI SSSDGTKLAA + G IY STD Sbjct: 70 VNLPNGLSVERIAMRPSPKPFTSPEIVKNADGTTVIYWLNIAFSKRKGGKRRFRVKVKADDCAPESLRLNAFAYTVNGT--GASCITPLAKSATVNVRYSSSK--------NAATCAPTPVPTTNPAQPFIVLGAGQRFSQGGRLAPFQDRRLSVPSPIDMHQDKTAPSHLQNRQLQ--SIDTPDACYEYCSLNAGQETPFLFSWNTVTRQCFCCVAVCTPFIFDPDSSVYEVVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSRDWRSIASSSDGTKLAAVVYNGSIYKSTD 403
BLAST of NO13G00400 vs. NCBI_GenBank
Match: XP_005855618.1 (hypothetical protein NGA_0613100 [Nannochloropsis gaditana CCMP526] >EKU20749.1 hypothetical protein NGA_0613100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 185.3 bits (469), Expect = 5.600e-43 Identity = 99/227 (43.61%), Postives = 129/227 (56.83%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARPFRMLSPAQIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRR-LSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDF 224 + LP GL+V K +P L QI+++ DGTT ++W DF +K +K F+A D CAPE L + A A++VNATD+S C LV P ++ VRYP +L R TCAPTPAP++NP+ PF GEG R + GQLAPF RR LS + S G R L IN P +C+ YCS+NG +P PF F WN T QC+CC G C + +P F Sbjct: 69 LALPNGLNVHKTATKPSSKLYTPQIVRDLDGTTELFWEGIDFTDRKRNKGRFRAKADVDSCAPETLAINAYAFVVNATDVS--CITELVTPTIINVRYP--------SLRRGATCAPTPAPTINPSDPFVPVGEGLRFSRGGQLAPFQRRALSTPSGLSRDMSPASPEGGAWRLLQ--TINTPADCYAYCSVNGGQPPPFLFEWNRVTRQCYCCMGTCTPFVFDPAF 283
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM20153.1 (hypothetical protein Naga_101489g1 [Nannochloropsis gaditana]) HSP 1 Score: 183.3 bits (464), Expect = 2.100e-42 Identity = 99/207 (47.83%), Postives = 126/207 (60.87%), Query Frame = 0 Query: 24 QIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRRLSALH---NADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFN 225 QI+++ DG TAI W F +K KR F+ V AD CAPE L V A AYL+NATD S C PL +P +++VRY K TCAPTPAP+VNP PF + GEG R Q +LAPF+ R +LH N EG+ ++ Q RQL I+ P C+ YCS++G+E PF F+WNT T+QCFCC G C LIV+PD+N Sbjct: 12 QIVEDADGVTAISWQGLAFTKRKGGKRRFRVKVKADQCAPETLAVDAFAYLINATDTS--CITPLANPAIVKVRYLKRNK--------DATCAPTPAPTVNPTQPFVLLGEGLRFSQGERLAPFEDRRLSLHTEINRHEGI--IARYHPQDRQLQ--SIDTPEACYVYCSLSGSEEVPFLFSWNTVTSQCFCCAGVCTPLIVDPDYN 204
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM20654.1 (Quinoprotein amine dehydrogenase, beta chain [Nannochloropsis gaditana]) HSP 1 Score: 183.3 bits (464), Expect = 2.100e-42 Identity = 99/237 (41.77%), Postives = 132/237 (55.70%), Query Frame = 0 Query: 1 MELPAGLSVVKLKARPFRMLSPAQIIQNPDGTTAIYWTDFDF--KKSSKRVFQAVVMADDCAPEMLDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPFDRR-LSALHNADEGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGT 234 + LP GL+V K +P L QI+++ DGTT ++W DF +K +K F+A D CAPE L + A A++VNATD+S C LV P ++ VRYP +L R TCAPTPAP++NP+ PF GEG R + GQLAPF RR LS + S G R L IN P +C+ YCS+NG +P P F WN T QC+CC G C + +P F + ++ T Sbjct: 69 LALPNGLNVHKTATKPSSKLYTPQIVRDLDGTTELFWEGIDFTDRKRNKGRFRAKADVDSCAPETLAINAYAFVVNATDVS--CITELVTPTIINVRYP--------SLRRGATCAPTPAPTINPSDPFVPVGEGLRFSRGGQLAPFQRRALSTPSGLSRDMSPASPEGGAWRLLQ--TINTPADCYAYCSVNGGQPPPSLFEWNRVTRQCYCCMGTCTPFVFDPAFVVFVGLVPAT 293
BLAST of NO13G00400 vs. NCBI_GenBank
Match: EWM20213.1 (hypothetical protein Naga_100777g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 149.8 bits (377), Expect = 2.600e-32 Identity = 82/173 (47.40%), Postives = 104/173 (60.12%), Query Frame = 0 Query: 64 LDVTALAYLVNATDLSAYCAVPLVDPVVLRVRYPGNKKVSEHALSRSVTCAPTPAPSVNPAIPFQIFGEGQRCLQAGQLAPF-DRRLSALHNAD-EGLKSLSTIDGQHRQLPPVEINNPTECFDYCSINGNEPSPFFFNWNTATNQCFCCGGEC-DLIVEPDFNAYKVVLAGT 234 + + A AYLVNAT A + + +L VRYP +K + TCAPTPAPSVNPA PF +F EGQRC +AG+LAPF DRRLS + G + R L I++P C+ YCS+N E +PFFFNWNT T+QCFCCG C I +PD+N Y+V+L T Sbjct: 1 MTIDAFAYLVNAT---AASCITSTNSAILSVRYPKHK--------NAATCAPTPAPSVNPAQPFVLFREGQRCSEAGRLAPFEDRRLSLSSGMNRHGGDGPAQRHSGDRDLQ--SIDSPEACYAYCSLNAGEETPFFFNWNTVTSQCFCCGSVCTPFIFDPDYNLYEVLLPTT 160 The following BLAST results are available for this feature:
BLAST of NO13G00400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00400 ID=NO13G00400|Name=NO13G00400|organism=Nannochloropsis oceanica|type=gene|length=2817bpback to top protein sequence of NO13G00400.1 >NO13G00400.1-protein ID=NO13G00400.1-protein|Name=NO13G00400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=592bpback to top Synonyms
Publications
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