NO13G00160, NO13G00160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00160 vs. NCBI_GenBank
Match: WP_076400903.1 (NUDIX domain-containing protein [Insolitispirillum peregrinum]) HSP 1 Score: 94.7 bits (234), Expect = 6.000e-16 Identity = 56/140 (40.00%), Postives = 76/140 (54.29%), Query Frame = 0 Query: 143 INQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLD----HSVLEFYPRCFMTTDAIYNDDMGAVKYHFVISQMVC-WASPEAAPIAADDAKDIRWMTLPQLRGLD 278 +++YP P+ AV VVVR L L VQR P W PGG + +GE + A REL EET ++ H L P F + D I D +GAV+YHFV++ ++C W S + +A DDA D W TLP++ LD Sbjct: 3 VSRYPRGPQPAVLAVVVREERL------LLVQRKNPPDAGCWGFPGGRLMLGETLAAGAVRELREETAVEAVARHGTL---PAAFASLDVIERDIVGAVRYHFVLTAVLCQWQSGDG--VAGDDAADCAWRTLPEILALD 131
BLAST of NO13G00160 vs. NCBI_GenBank
Match: OGO23290.1 (hypothetical protein A2Z28_03315 [Chloroflexi bacterium RBG_16_51_9]) HSP 1 Score: 94.0 bits (232), Expect = 1.000e-15 Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 146 YPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGAVKYHFVISQMVC-WASPEAAPIAADDAKDIRWMTLPQLRGLDTDAIFRGVIE 288 YP P AV+ ++ + L ++RSKEP +W++PGG +E+GE + QA RE+ EE +++ V R F TT+ I DD G VKYH+V+ M+ +A E A DA++ RW+T +L LD R V+E Sbjct: 12 YPAHPTVAVSAIIFKE------ERVLMIKRSKEPNKGKWSIPGGGIELGETLDQAVKREVREECSIEIEV----ERVFYTTENIIRDDDGRVKYHYVLVDMLAKYAGGETK--AQSDAEECRWVTAEELSELDITPRLRAVLE 142
BLAST of NO13G00160 vs. NCBI_GenBank
Match: OGO42110.1 (hypothetical protein A2137_06310 [Chloroflexi bacterium RBG_16_58_8]) HSP 1 Score: 94.0 bits (232), Expect = 1.000e-15 Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 0 Query: 146 YPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGAVKYHFV-ISQMVCWASPEAAPIAADDAKDIRWMTLPQLRGLDTDAIFRGVI 287 YP FPR V +VV+R L V+R+KEP +W++PGG E+GE + +AA RE++EE ++ + R T D I D+ G VKYHF+ I + + S EA A DA++ RW+ + ++ GLD + R ++ Sbjct: 12 YPEFPRVGVGVVVIR------DERILMVKRAKEPYKGKWSIPGGGQELGETLYEAARREVIEECSISVEI----DRLXXTVDEIIRDEKGRVKYHFIDIDVLGRYISGEAR--AQSDAEECRWVAIGEMAGLDIPSNLRDML 141
BLAST of NO13G00160 vs. NCBI_GenBank
Match: XP_005852043.1 (hypothetical protein CHLNCDRAFT_133014 [Chlorella variabilis] >EFN59941.1 hypothetical protein CHLNCDRAFT_133014 [Chlorella variabilis]) HSP 1 Score: 92.4 bits (228), Expect = 3.000e-15 Identity = 55/160 (34.38%), Postives = 77/160 (48.12%), Query Frame = 0 Query: 135 VAPPEQPVINQ------YPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLD-----------HSVLEFYPRCFMTTDAIYNDDMGAVKYHFVISQMVCW-ASPEAAPIAADDAKDIRWMTLPQLRGL 277 V P +P + Q YP PR V +VV+R P + E L ++R+KEP W PGGS+E+GE ++ A RE +EET L +S +P D++ DD G + YH+ I + P AP ADD +W + QLRGL Sbjct: 29 VLPEAEPEVQQAGKVHVYPDEPRVGVGVVVLRQLPPDRQPEVLLIRRAKEPAKGLWCFPGGSLELGETLVDCAVRETLEETGLRLRSAPIPEGELYSDCLDFPSPIAAADSLTRDDGGRLLYHYAIINLAAVPEDPHQAPEPADDVDGAQWFPVSQLRGL 188
BLAST of NO13G00160 vs. NCBI_GenBank
Match: PRW60395.1 (General transcription factor IIH subunit 2 [Chlorella sorokiniana]) HSP 1 Score: 92.4 bits (228), Expect = 3.000e-15 Identity = 51/148 (34.46%), Postives = 75/148 (50.68%), Query Frame = 0 Query: 141 PVINQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLD-----------HSVLEFYPRCFMTTDAIYNDDMGAVKYHF-VISQMVCWASPEAAPIAADDAKDIRWMTLPQLRGL 277 P + YP PR V IVV+R P E L ++R+KEP +W PGGS+E+GE +++ A RE +EET + L+F P ++DA+ D+ G + YH+ +I+ P P+ DD W + QLRGL Sbjct: 461 PKVRNYPDEPRVGVGIVVLRQLPPAHTPEVLLIRRAKEPSKGKWCFPGGSLELGETLVECAVRETLEETGIRLRNAPRQGQVFSDALDF-PSPVSSSDAMIRDEQGRLMYHYAIINLAAAPEDPHQPPVPTDDVDAADWFPVSQLRGL 607
BLAST of NO13G00160 vs. NCBI_GenBank
Match: GAX21888.1 (hypothetical protein FisN_30Hu089 [Fistulifera solaris]) HSP 1 Score: 91.3 bits (225), Expect = 6.600e-15 Identity = 64/167 (38.32%), Postives = 84/167 (50.30%), Query Frame = 0 Query: 148 VFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEET--TLDHSVLEFYPRCFMTTDAIYNDDMGAVKYHFVISQMVCWA------SPEAAPIAADDAKDIRWMTLPQLRGLDTDAIFRGVIEVVETVERLVDVGCITKADL 307 + PRAAV++VV + YL VQR KEP +W+ PGG +E GE L AA REL EET H LE+YP T+D+I YH++I+Q C+A S AADDA D+ W TL + LDT G+ EV+ + L G + L Sbjct: 13 MIPRAAVSVVV--HCQWSSQNYYLLVQRGKEPAKGKWSFPGGKIEWGESTLAAAVRELREETKWATHHHPLEWYPGTVCTSDSI------GSTYHYLIAQ--CYAQVTFPVSELPVVAAADDAADVGWWTLDDMETLDTTP---GLSEVIRRIALLSQHGMLPTVSL 166
BLAST of NO13G00160 vs. NCBI_GenBank
Match: XP_011395866.1 (hypothetical protein F751_0357 [Auxenochlorella protothecoides] >KFM22999.1 hypothetical protein F751_0357 [Auxenochlorella protothecoides]) HSP 1 Score: 90.5 bits (223), Expect = 1.100e-14 Identity = 57/151 (37.75%), Postives = 75/151 (49.67%), Query Frame = 0 Query: 147 PVFPRAAVNIVVVRARPLNMGR-EYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTL----------------DHSVLE---FYPRCFMTTDAIYNDDMGAVKYHFVISQMV-CWASPEAAPIAADDAKDIRWMTLPQLRGL 277 P P V + VV R L+ G E L ++R+K P W PGGS+E+GE ++Q A RE +EET L H L YP F+ DAI DD GA+ +H+ I + +PEAA + DDA D RW + LRGL Sbjct: 453 PSKPEPRVGVGVVVLRELSPGNPETLLIRRAKAPNKGDWCFPGGSLELGETLVQCAVRETLEETGLRLRCRLPQAEHGQPDARHPPLSPDLAYPSSFIAGDAITYDDAGALAFHYAIVNVAGVPENPEAAVVPGDDAADARWFPVTDLRGL 603
BLAST of NO13G00160 vs. NCBI_GenBank
Match: PNW80936.1 (hypothetical protein CHLRE_07g336000v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 90.1 bits (222), Expect = 1.500e-14 Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = 0 Query: 146 YPVFPRAAVNIVVVRARPLNMG--REYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLD-----------------HSVLEFYPRCFMTTDAIYNDDMGAVKYHFVISQM--VCWASPEAAPIAADDAKDIRWMTLPQLRGL 277 YP PR V +VV R P+ G E L V+R+KEP +W LPGGS+E+GE + AARE+ EE L+ +L+ P F D I + G +K+H+ + ++ VC + P AAP+ DDA W+ L ++RG+ Sbjct: 67 YPREPRVGVGVVVFRTPPVLGGPEPEVLLVRRAKEPDKGRWCLPGGSLELGETLADCAAREVKEEAGLNLLGATDGSSSASSGPAPWDLLKNGPIPFAAVDVIRKEPGGGIKFHYAVIEVAAVC-SDPAAAPVPGDDADGAIWVPLSKMRGM 217
BLAST of NO13G00160 vs. NCBI_GenBank
Match: PQM54334.1 (phosphohydrolase [Deltaproteobacteria bacterium]) HSP 1 Score: 88.6 bits (218), Expect = 4.300e-14 Identity = 54/146 (36.99%), Postives = 75/146 (51.37%), Query Frame = 0 Query: 142 VINQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGAVKYHF-VISQMVCWASPEAAPIAADDAKDIRWMTLPQLRGLDTDAIFRGVI 287 +I +YP P V +VV+R G E L VQR K P QW++PGG +GE ++QA REL+EET V P D I DD G ++YH+ ++ W S E + DDA DI+W+T +L L I + +I Sbjct: 3 IIREYPERPFVGVGVVVLR------GDEVLLVQRVKAPYKGQWSIPGGKQRLGETVMQAVHRELLEET----GVKIEXPTLLDVVDVIVPDDNGNIQYHYTLVDYKAEWLSGECC--SGDDADDIKWVTFDELSSLKLLEITKEII 136
BLAST of NO13G00160 vs. NCBI_GenBank
Match: WP_008161504.1 (NUDIX domain-containing protein [Achromobacter arsenitoxydans] >EHK66457.1 NUDIX domain-containing protein 4 [Achromobacter arsenitoxydans SY8]) HSP 1 Score: 88.2 bits (217), Expect = 5.600e-14 Identity = 51/127 (40.16%), Postives = 70/127 (55.12%), Query Frame = 0 Query: 171 LFVQRSKEPGTDQWALPGGSVEIGEEMLQAAARELVEETTLDHSVLEFYPRCFMTTDAIYNDDMGAVKYHFVISQMVC-WASPEAAPIAADDAKDIRWMTLPQLRGLDTDAIFRGVIEVVETVERLV 297 L V+R+ P D+WA PGG ++ GE + AAAREL+EET + L R F D DD GA++ HF++ ++C W S E P+A DDA+D RW+ L L G F GV E+ L+ Sbjct: 23 LLVRRANPPDQDRWAFPGGKIDAGERLEAAAARELLEETGVTAEPL----RVFDAVDVFDRDDAGALRRHFILIAVLCRWRSGE--PVAGDDARDARWVPLSDLDGHALATSF-GVAELAHKAAALM 142 The following BLAST results are available for this feature:
BLAST of NO13G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00160 ID=NO13G00160|Name=NO13G00160|organism=Nannochloropsis oceanica|type=gene|length=4757bpback to top protein sequence of NO13G00160.1 >NO13G00160.1-protein ID=NO13G00160.1-protein|Name=NO13G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=354bpback to top Synonyms
Publications
|