NO12G03430, NO12G03430 (gene) Nannochloropsis oceanica

Overview
NameNO12G03430
Unique NameNO12G03430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1947
Alignment locationchr12:940385..942331 +

Link to JBrowse

Properties
Property NameValue
DescriptionCystathionine gamma-synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:940385..942331 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR000277Cys/Met-Metab_PyrdxlP-dep_enz
Homology
BLAST of NO12G03430 vs. NCBI_GenBank
Match: XP_012194614.1 (hypothetical protein SPRG_01022 [Saprolegnia parasitica CBS 223.65] >KDO34960.1 hypothetical protein SPRG_01022 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 334.0 bits (855), Expect = 1.000e-87
Identity = 212/545 (38.90%), Postives = 290/545 (53.21%), Query Frame = 0
Query:   68 LRKTLGAPIPLNDHAVSVTMPKWQHVVGYEEGDADVTDKLVLGYPRFVYHPFVKQLVDVWKAHAVEVGAIAAHEVVGALPFPSLGTAERCRRFLEDAHAHEPGFPVNLHPVGVMDTYIVTFPSFAAGEAKAYWQHSGEILSSRKAARVL--ASLGHPVSTLVNGFPSAAPLSSXXXXXXXXXTAVGEARPGCYRQALKERISALTGQREEDVYLTISGMAAIFKAFHICKQAR---PNRRVVVFGFTYLDTLKICLRKEWNSHGVHFLGRGDVADLKTLEGILKEEEIMAVFTEFPSNPLLQCPDLGKLTELGREYGFPVVVDDTISNFDNVDLMGAERGREGGGYGGIDMSVSSLTKLFSGKGDVMAGSLVLNGKSPSYKELRRAMEEGKEGGREGGLGDDAELYEEDAKVVWENGRDFEERSRRINETTRGLVEWLVGEEGVEEVSYPSRTQKEIYDRFR---RREGGYGGLFSVSLKEG-LSPTAFYDALDVYKGPSLGTNFTLACPYTLLAHYNELDFARSHGVCPNLVRVSVGLEGLESL 604
            L   LG P+P + HAVSV+MPKW HV  YE+G  ++   L  GYPRFVYH +VK L + W    V+      +E   A   P+   A+RC  FL   H   P   +++ P+   D + +  P+ AA   KA+WQHSGEI SSR A  VL   S G P  + ++G P+ A                           L++RI +L     + V L  SGMA+IF AF + ++ R   P + ++V GF YLDTLK+  R EW++  V F  RGD ADL  ++ I   + + A+FTEFPSNPLL   DL +L  +   +   +VVDDT+ ++ NV+++     RE  G+   D+  +SLTK+FSG G VM GSLV N  SP    L             G L  D+ L+E+DA  +  +  D   R  R+N T   +   L     VE + YP       Y+ F         +G L SV L  G  +  AFYDAL   KGPSLGTNFTL+CPYTLLAHY+ELD+  S GV  +L+R+S+GLE ++ +
Sbjct:    6 LNAALGEPLPDDVHAVSVSMPKWSHVERYEQGCPELHASLRSGYPRFVYHGYVKDL-NGWCTKYVD------NESQTARVLPTQAVAKRCEAFL---HRSFPDAAIDIVPLHACDAHAIVLPTIAAACFKAFWQHSGEITSSRLAEHVLNAVSNGTPSPSRMDGTPTHA--------------------------LLRDRIGSLYDVPSDHVNLYPSGMASIFAAFRLVQKLRGHLPGKTILV-GFPYLDTLKMLRRSEWSTGDVLFFPRGDAADLDAIDAI---DHMHAIFTEFPSNPLLHSTDLPRLAAIAHRHNTLLVVDDTVGSY-NVNVL-----RETNGHAA-DLVATSLTKIFSGTGTVMGGSLVANPSSPLLDTLL------------GALAGDSFLFEDDAAALLHDSDDLAARLTRVNATAASVASRLESHPKVERIFYPKYVDTLAYEHFNLAAAATDAHGPLLSVVLHGGQAAAKAFYDALTFAKGPSLGTNFTLSCPYTLLAHYDELDYVESCGVPRDLIRISIGLEAVDEI 491          
BLAST of NO12G03430 vs. NCBI_GenBank
Match: GBG29388.1 (Cystathionine gamma-lyase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 332.4 bits (851), Expect = 3.000e-87
Identity = 216/558 (38.71%), Postives = 292/558 (52.33%), Query Frame = 0
Query:   72 LGAPIPLND-HAVSVTMPKWQHVVGYEEGDADVTDKLVLGYPRFVYHPFVKQLVDVWKAHAVEVGAIAAHEVVGALPFPSLGTAERCRRFLEDAHAHEPGFPVNLHPVGVMDTYIVTFPSFAAGEAKAYWQHSGEILSSRKAARVLASLGHPV--STLVNG---FPSAAPL-SSXXXXXXXXXTAVGEARPGCY--RQALKERISALTGQREEDVYLTISGMAAIFKAFHICK-----QARPNRRVVVFGFTYLDTLKICLRKEWNSHGVHFLGRGDVADLKTLEGILKEEEIMAVFTEFPSNPLLQCPDLGKLTELGREYGFPVVVDDTISNFDNVDLMGAERGREGGGYGGIDMSVSSLTKLFSGKGDVMAGSLVLNGKSPSYKELRRAMEEGKEGGREGGLGDDAELYEEDAKVVWENGRDFEERSRRINETTRGLVEWLVGEEGVEEVSYPSRTQKEIYDRFRR--REGGYGGLFSVSLKEGLSPTAFYDALDVYKGPSLGTNFTLACPYTLLAHYNELDFARSHGVCPNLVRVSVGLEGLESLKEAFRVALEA 614
            LG  +P  D HAV V+MP W  VV YEEGD +V  +L  GYPRFV+   VKQL     A A E   + AH    A+  PS   A R + FL           V+LH       +  TFP     +AK +WQHSGEI+SSR+AA VL  +      +    G      A  L  +          A   A+   Y  R+AL +RI ++  +   +VYL  +GMAAI     + K     + +P  R VVFGF YLDTLK+   +     G  F GRGD AD + L  +L+ E I  +F EFPSNPLL  PDL +L  L  E+GF ++VDD++    NVDL G          GG D+  +SLTK FSG G+VM GSLVLN + P Y  L+  ++   E            L+ EDA+V+ +   D E R  + N TT  L++ L     V+++ +PS    E+YDR++R     GYG LFSV  K       FY+ L + K P  GTNF++ CPYT++AHYNEL++A   GV  +L+R+ +G+E    L   F  AL++
Sbjct:  432 LGQSLPPKDYHAVGVSMPSWDDVVRYEEGDPNVHAQLSAGYPRFVFLHAVKQLF----AKAEE---LFAHPNERAMVLPSARIALRFQAFLGSKQ-------VDLHDCFAHGAFAATFPEELMPQAKKFWQHSGEIISSRQAAAVLDVIDRTCFENARTRGKREVRKAQTLDKAEAPDARMPPAAPHSAKQADYSSREALLKRIGSIMHENPRNVYLFPTGMAAIASTQRLLKLSSQWEEKP-LRTVVFGFPYLDTLKLAQLESSLGSGCTFFGRGDEADFQDLRKLLETERISGLFCEFPSNPLLMAPDLARLRSLADEFGFALIVDDSVVGSSNVDLTGP---------GGADIICTSLTKQFSGSGNVMGGSLVLNSEGPLYSVLKSRIDHDHE----------ENLWYEDAQVLLKACADLEARVAQTNATTMTLIDHLSKSPHVKKIYHPSCVGTELYDRYKRDVPHAGYGSLFSVVFKNPQHAQRFYNKLQIPKSPGFGTNFSMTCPYTVIAHYNELEWAAEFGVDESLIRIWIGMEDARELVAKFDAALDS 955          
BLAST of NO12G03430 vs. NCBI_GenBank
Match: XP_023471343.1 (PLP-dependent transferase [Rhizopus microsporus ATCC 52813] >ORE11815.1 PLP-dependent transferase [Rhizopus microsporus var. microsporus] >PHZ17635.1 PLP-dependent transferase [Rhizopus microsporus ATCC 52813])

HSP 1 Score: 331.6 bits (849), Expect = 5.200e-87
Identity = 233/613 (38.01%), Postives = 309/613 (50.41%), Query Frame = 0
Query:   71 TLGAPIPLN-DHAVSVTMPKWQHVVGYEEGDADVTDKLVLGYPRFVYHPFVKQLVDVWKAHAVEVGAIAAHEVVGALPFPSLGTAERCRRFLEDAHAHEPG-FPVNLHPVGVMDTY------IVTFPSFAAGEAKAYWQHSGEILSSRKAARVLASLG-------------HPVSTLVN------GFPSAAPLSSXXXXXXXXXTAVGEARPG---------CYRQALKERISA---------------------LTGQR------EEDVYLTISGMAAIFKAFHICKQ-ARPNRRVVVFGFTYLDTLKICLRKEWNSHGVHFLGRGDVADLKTLEGILKE-EEIMAVFTEFPSNPLLQCPDLGKLTELGREYGFPVVVDDTISNFDNVDLMGAERGREGGGYGGIDMSVSSLTKLFSGKGDVMAGSLVLNGKSPSYKELRRAMEEGKEGGREGGLGDDAELYEEDAKVVWENGRDFEERSRRINETTRGLVEWLVGEEGVEEVSYPSRTQKEIYD--RFRRREGGYGGLFSVSLKEGLSPTAFYDALDVYKGPSLGTNFTLACPYTLLAHYNELDFARSHGVCPNLVRVSVGLEGLESLKEAFRVALEAARK 617
            T GA IP +  HAVSVT+P WQ  + YEEG+  VT K+  GYPRF  HP +++L       +  + A         + FPS   AE CR F+   +    G   +    +   ++Y      IV FP  A   AK +WQHSG+I+SSR A   L+ L               P  TL        G   A              T   E R G           + ALK RI+                      LTG+R      EEDVYL   GM+AIF A          + + V FGF Y DTLKI   ++W + G HF G G+   +  +E  L+  E ++++F E PSNPLL+ P+L +L  L  +YGF +VVD+TI NF N+D++              D+ VSSLTK+FSG  +VM GSLVLN KS  YK+L+ A++   E            ++ EDA  +  N R F+ERS+ IN+    L ++L   E V++V YP    +E YD  + +  + GYGGLFSV LK+  S   F+D L   KGPSLGTNFTLACPYT+LAHY ELD+A  +GV   LVRVSVGLE  E L   F+ AL+A  +
Sbjct:   10 TAGAAIPAHTPHAVSVTLPTWQDNIYYEEGNPIVTSKMECGYPRFFIHPLIQKL-------SARLVAKFGKPNDSCMLFPSHKVAESCRAFMHRYYQQPLGTIRIAEFEIAAPESYERVPIHIVLFPQDAFPIAKQFWQHSGDIISSRMAEYCLSILDGNQNTPEPTKQEIKPKLTLGGRSQSHYGSKHAKQSKHEEESVSGEQTTYLEERYGRNLPVQFAKNAKVALKRRIAGILTDVSVDDHLTTSNVEEQRQLTGERGIQGLSEEDVYLYPCGMSAIFHAHQYAMAIGDASLKSVCFGFPYTDTLKIL--QKWGA-GCHFYGLGEDKCIDEMEQRLQAGERVLSLFCELPSNPLLKSPNLKRLRSLADQYGFLIVVDETIGNFCNIDVL-----------SWADVVVSSLTKVFSGDSNVMGGSLVLNPKSAYYKQLKDALKHDYED----------LVWSEDAVFLERNSRTFKERSKIINQNAEALCDFLASHEKVQKVFYPKYVCREYYDAVKHKTEDAGYGGLFSVLLKDERSAAQFFDNLKCAKGPSLGTNFTLACPYTILAHYTELDWANEYGVSRYLVRVSVGLEDREKLMSMFKQALDAVNQ 591          
BLAST of NO12G03430 vs. NCBI_GenBank
Match: ORX49114.1 (PLP-dependent transferase [Hesseltinella vesiculosa])

HSP 1 Score: 330.1 bits (845), Expect = 1.500e-86
Identity = 242/629 (38.47%), Postives = 316/629 (50.24%), Query Frame = 0
Query:   72 LGAPIPLN-DHAVSVTMPKWQHVVGYEEGDADVTDKLVLGYPRFVYHPFVKQLVDVWKAHAVEVGAIAAHEVVGALPFPSLGTAERCRRFLEDAH--AHE----------PGFPVN-----LHPVGVMDTYIVTFPSFAAGEAKAYWQHSGEILSSRKAARVLASLGHPVSTLVNGFPSA--APLSSXXXXXXXXXTAVGEAR------------------------------PGCYRQALKERISAL---------------------------TGQR------EEDVYLTISGMAAIFKAFHIC-KQARPNRRVVVFGFTYLDTLKICLRKEWNSHGVHFLGRGDVADLKTLEGILKE-EEIMAVFTEFPSNPLLQCPDLGKLTELGREYGFPVVVDDTISNFDNVDLMGAERGREGGGYGGIDMSVSSLTKLFSGKGDVMAGSLVLNGKSPSYKELRRAMEEGKEGGREGGLGDDAELYEEDAKVVWENGRDFEERSRRINETTRGLVEWLVGEEGVEEVSYPSRTQKEIYDRFRRREGGYGGLFSVSLKEGLSPTAFYDALDVYKGPSLGTNFTLACPYTLLAHYNELDFARSHGVCPNLVRVSVGLEGLESLKEAFRVALEAAR 616
            +G+ IP +  HAVSVT+P W+  +GYEEGD  VT K+  GYPRF  HP +++L     A  ++     + +    + FPS   AE+CR F++  +  AHE             PV+     L PV V   Y+V FP+ A   AK YWQH+G+I+SSR A   L  L    +   N   +A  A L           TA G A                                G  ++AL+ RI+ +                           TGQR      E DVYL  +GM+AI+ A  I  K    +R  V FGF Y DTLKI L+K     G HF G GD A L  LE +L   E I+++F E PSNPLL+ PD+ +L  L  ++GF +VVD+TI NF NV+++              D++VSSLTK+FSG  +VM GSLVLN     Y  L  A++   E            ++ EDA  +  N RDF  RS+RINE T  L E LV    V  V YP  T  E Y + +  +GGYGGLFSV LK     + F+D L+  KGPSLGTNFTLA PYT+LAHY ELD+A+  GV  +LVRVSVGLE  + L   F  AL + +
Sbjct:   11 VGSAIPAHTPHAVSVTLPTWEANIGYEEGDTKVTSKMECGYPRFFIHPHIQKLC----ARLLQKFGKPSEK---GMLFPSRNIAEKCRVFMKKYYTPAHERTGLVRIAECEVAPVDTASCELQPVSV---YLVLFPADAFPVAKQYWQHAGDIVSSRLAEYCLRILDQNDAATNNSADAAPTAMLGPKKQGRYGRPTASGTATTAKPSASNQEDVDQQFFLEERYGRNLPVAFAGQAKRALRRRIAGVLTEAEEIHKALTSEQTTDADLEKQRGRTGQRGIKGLSENDVYLYPTGMSAIYHAHQIAMKVGDASRHSVCFGFPYTDTLKI-LQK--FGPGCHFYGLGDDASLDELELLLASGESILSLFCEIPSNPLLKTPDIHRLRTLADKHGFLLVVDETIGNFCNVNVL-----------EWADIAVSSLTKVFSGDSNVMGGSLVLNPNRRFYTALVEALKSDYED----------VMWNEDAVFLERNSRDFRSRSKRINENTEALCEMLVKHPKVVGVYYPKYTCTEHYHKVKNIQGGYGGLFSVMLKNEQQASQFFDNLNCAKGPSLGTNFTLASPYTILAHYTELDWAKQFGVERHLVRVSVGLEEHDRLLAMFESALNSVQ 605          
BLAST of NO12G03430 vs. NCBI_GenBank
Match: EIE87144.1 (hypothetical protein RO3G_11855 [Rhizopus delemar RA 99-880])

HSP 1 Score: 329.7 bits (844), Expect = 2.000e-86
Identity = 233/617 (37.76%), Postives = 312/617 (50.57%), Query Frame = 0
Query:   71 TLGAPIPLN-DHAVSVTMPKWQHVVGYEEGDADVTDKLVLGYPRFVYHPFVKQLVDVWKAHAVEVGAIAAHEVVGALPFPSLGTAERCRRFLEDAHAHEPG------FPVNLHPVGVMDTYIVTFPSFAAGEAKAYWQHSGEILSSRKAARVLASL---------GHPVSTLV-----------NGFPSAAPLSSXXXXXXXXXTA---------VGEARPGCY----RQALKERISA-----------------------LTGQR------EEDVYLTISGMAAIFKAFHICKQARPNR--RVVVFGFTYLDTLKICLRKEWNSHGVHFLGRGDVADLKTLEGILKE-EEIMAVFTEFPSNPLLQCPDLGKLTELGREYGFPVVVDDTISNFDNVDLMGAERGREGGGYGGIDMSVSSLTKLFSGKGDVMAGSLVLNGKSPSYKELRRAMEEGKEGGREGGLGDDAELYEEDAKVVWENGRDFEERSRRINETTRGLVEWLVGEEGVEEVSYPSRTQKEIYD--RFRRREGGYGGLFSVSLKEGLSPTAFYDALDVYKGPSLGTNFTLACPYTLLAHYNELDFARSHGVCPNLVRVSVGLEGLESLKEAFRVALEA 614
            T+G+ IP +  HAVSV  P WQ  + YEEG+  VT K+  GYPRF  HPF++QL       +  + A        ++ FPS   AE CR F+   +    G      F +       +  +I  FP  A   AK +WQHSG+I+ SR A   L  L         G P   L            + + S   +S           A          G   P  +    + AL+ RI+                        LTG+R      EEDVYL   GM+AI+ A H C     ++  + V FGF Y DTLKI   ++W + G HF G G+   +  LE +L+  E+I+++F E PSNPLL+ P++ ++  L  +YGF VVVD+TI NF NVD++              D+  SSLTK+FSG  +VM GS++LN KS  Y +L+ A++   E            L+ E+A  +  N R F+ERS+ IN+ T  L ++LV  E V +V YP  T +E YD  + +  E GYGGLFSV LK+  S   FYD L   KGPSLGTNFTLA PYT+LAHY ELD+A  +GVC  LVRVSVGLE  E L   F+ AL A
Sbjct:   10 TVGSSIPAHTPHAVSVMFPTWQDNIYYEEGNPIVTSKMECGYPRFFIHPFIQQL-------SARLTAKFGKPGDSSMLFPSHKAAESCRAFMNRYYQSPTGTVRIAEFEIVSPESERVPIHIALFPQDAFPIAKQFWQHSGDIICSRMAEYCLRVLDAKDEGGKEGSPSDDLYRPKLTMGGRSRSHYSSKQQISKSANSGDEKVAAEQATYLEERYGRNLPVKFANNAKIALRRRIAGILTDVPIEDQAVNSSSSVEEQRKLTGERGIKGLSEEDVYLYPCGMSAIYHA-HQCAMLIGDKTLKSVCFGFPYTDTLKIL--QKWGA-GCHFYGLGEEESIDELEQMLESGEKILSLFCELPSNPLLKSPNIKRIRRLADQYGFLVVVDETIGNFCNVDVV-----------SWADVVASSLTKVFSGDSNVMGGSMILNPKSKYYHQLKEALKTDYED----------LLWSEEAVFLERNSRTFKERSKVINQNTEALCDFLVTHEKVHKVFYPKYTCRENYDAVKHKTEEAGYGGLFSVLLKDEKSAAQFYDHLKCAKGPSLGTNFTLASPYTILAHYTELDWAAKYGVCRYLVRVSVGLEDREKLLSMFKDALNA 594          
BLAST of NO12G03430 vs. NCBI_GenBank
Match: OQS00443.1 (cystathionine gamma-synthase [Achlya hypogyna])

HSP 1 Score: 328.6 bits (841), Expect = 4.400e-86
Identity = 212/554 (38.27%), Postives = 296/554 (53.43%), Query Frame = 0
Query:   68 LRKTLGAPIPLNDHAVSVTMPKWQHVVGYEEGDADVTDKLVLGYPRFVYHPFVKQLVDVWKAHAVEVGAIAAHEVVGALPFPSLGTAERCRRFLEDAHAHEPGFPVNLHPVGVMDTYIVTFPSFAAGEAKAYWQHSGEILSSRKAARVLASLGHPVSTLVNGFPSAAPLSSXXXXXXXXXTAVGEARPGCYRQALKERISALTGQREEDVYLTISGMAAIFKAFHICKQAR---PNRRVVVFGFTYLDTLKICLRKEWNSHGVHFLGRGDVADLKTLEGILKEEEIMAVFTEFPSNPLLQCPDLGKLTELGREYGFPVVVDDTISNFDNVDLMGAERGREGGGYGGIDMSVSSLTKLFSGKGDVMAGSLVLNGKSPSYKELRRAMEEGKEGGREGGLGDDAELYEEDAKVVWENGRDFEERSRRINETTRGLVEWLVGEEGVEEVSYPSRTQKEIYDRFRRREG---GYGGLFSVSLKEG-LSPTAFYDALDVYKGPSLGTNFTLACPYTLLAHYNELDFARSHGVCPNLVRVSVGLEGLESLKEAFRVALEAA 615
            L   LG P+P + HAVSV+MPKW HV  YE+G  D+   L  GYPRFVYH +VK+L      +A       A     A   P+L  A+RCR F+   H+H P   +++ P+  ++ + +  PS AAG  K +WQHSGEILSSR A ++LA+L                             ++G          L++RI+ L     + V L  SGMA+IF AF + ++ R   P + V+V GF YLDTLK+  R EW+   V F  RGD  D+  ++   K E I A+FTEFPSNPLL+  DL +L  +   +   +VVDDT+ ++ NV+++     +E   +   D+  +SLTK+F G G VM GSLV++ +SP    L  A            L  D+ LYE DA  +     D + R  RIN T   +   L     VE + YP      +Y+ F  +      +G L S+ L+ G  +  +FYDAL + KGPSLGTNFTLACPYTLLAHY+ELD+  S GV  +L+R+S+GLE ++ +      AL  A
Sbjct:    7 LSAPLGDPLPDHVHAVSVSMPKWSHVERYEQGCPDLHAALRGGYPRFVYHAYVKEL------NAYVHERFIADVAKAAFVLPTLDVAQRCRAFV--LHSH-PTVAIDVLPLPGIEAHAIVLPSDAAGSFKPFWQHSGEILSSRLAEQLLAAL-----------------------RATETPSLGRMDGSQVHSDLRQRIAGLYDVPAQHVSLYPSGMASIFAAFRLVQRLRGHLPGQTVLV-GFPYLDTLKMLRRPEWSGGDVRFFPRGDQDDIDAID---KLEHIHAIFTEFPSNPLLRSTDLPRLAAIAHRHNTVLVVDDTVGSY-NVNVL-----KETDSHAA-DLVATSLTKIFCGTGTVMGGSLVVSPESPHVAALLDA------------LASDSFLYEGDAVALLAASEDLQPRLARINATAATIASRLQAHPMVEAIYYPKFIDTALYEHFNPQAAATDAHGPLLSLVLRGGQAAAKSFYDALTLAKGPSLGTNFTLACPYTLLAHYDELDYVESCGVPRDLLRISIGLEDVDEVWAILSSALVTA 505          
BLAST of NO12G03430 vs. NCBI_GenBank
Match: OQS06771.1 (cystathionine gamma-synthase [Thraustotheca clavata])

HSP 1 Score: 327.8 bits (839), Expect = 7.500e-86
Identity = 212/555 (38.20%), Postives = 295/555 (53.15%), Query Frame = 0
Query:   68 LRKTLGAPIPLNDHAVSVTMPKWQHVVGYEEGDADVTDKLVLGYPRFVYHPFVKQLVDVWKAHAVEVGAIAAHEVVGALPFPSLGTAERCRRFLEDAHAHEPGFPVNLHPVGVMDTYIVTFPSFAAGEAKAYWQHSGEILSSRKAARVLASL-GHPVSTLVNGFPSAAPLSSXXXXXXXXXTAVGEARPGCYRQALKERISALTGQREEDVYLTISGMAAIFKAFHI---CKQARPNRRVVVFGFTYLDTLKICLRKEWNSHGVHFLGRGDVADLKTLEGILKEEEIMAVFTEFPSNPLLQCPDLGKLTELGREYGFPVVVDDTISNFDNVDLMGAERGREGGGYGGIDMSVSSLTKLFSGKGDVMAGSLVLNGKSPSYKELRRAMEEGKEGGREGGLGDDAELYEEDAKVVWENGRDFEERSRRINETTRGLVEWLVGEEGVEEVSYP---SRTQKEIYDRFRRREGGYGGLFSVSLKEG-LSPTAFYDALDVYKGPSLGTNFTLACPYTLLAHYNELDFARSHGVCPNLVRVSVGLEGLESLKEAFRVALEAA 615
            L   LGAP+P + HAVSV+MPKW+HV  YE+G  D+   L  GYPRFVYH +VK L     A   EV  +   + +  L  P+L  AERCR F+E      P   V +  + V+D + +  P  AA   K++WQHSGE++SSR A  +L  L    V   +       P  +                      AL+ERI +L      +V L  SGMA+IF AF +    KQ+ P + V+V GF YLDTLK+  R EW++  V F  RGD  D+  ++ +   E I A+FTEFPSNPLLQ  DL +L  +   +   +VVDDT+ ++ NV+++    G         D+  SSLTK+F G G VM GSL+ N  SP +  ++  +E            +D+ L+E+D   + +   D   R  RIN T   +   L     VE + YP   + +Q E Y+        +G L S+ ++ G  +   FYDAL   KGPSLGTNFTL+CPYTLLAHY+ELD+  S GV  +L+R+S+GLE +E +      AL+ A
Sbjct:    7 LSADLGAPLPDHVHAVSVSMPKWEHVERYEQGCPDLHAALRSGYPRFVYHTYVKAL----NARYHEVFGLDTSKTLFVL--PTLTVAERCRDFIECTF---PKDCVEIKSLCVIDAHAIIVPVEAAACFKSFWQHSGELISSRLAHYILDVLQNRQVGEKIEFKMDLTPAHT----------------------ALRERIGSLYTTSGSNVNLYPSGMASIFAAFRLVQKLKQSTPGKTVLV-GFPYLDTLKMMRRTEWSNGDVLFFPRGDKNDIDAIDAL---ENIHAIFTEFPSNPLLQSTDLPRLAAIAHRHNTVLVVDDTVGSY-NVNVLSETHGH------AADLVASSLTKIFCGTGTVMGGSLIANPASPLFSTIQSLLE------------NDSFLFEDDVVALLQASEDIHARLARINATAATIAYRLKHHSMVETIYYPKYINTSQYEHYNSKAAESDAHGPLLSLVVRGGQTAAKTFYDALTFAKGPSLGTNFTLSCPYTLLAHYDELDYVESCGVPRDLIRISIGLEDVEEVWSCLERALDKA 507          
BLAST of NO12G03430 vs. NCBI_GenBank
Match: XP_502938.1 (YALI0D17402p [Yarrowia lipolytica CLIB122] >CAG81130.1 YALI0D17402p [Yarrowia lipolytica CLIB122] >AOW04192.1 hypothetical protein YALI1_D21408g [Yarrowia lipolytica] >SEI36332.1 YALIA101S11e01354g1_1 [Yarrowia lipolytica])

HSP 1 Score: 327.4 bits (838), Expect = 9.800e-86
Identity = 216/572 (37.76%), Postives = 288/572 (50.35%), Query Frame = 0
Query:   72 LGAPIPLN-DHAVSVTMPKWQHVVGYEEGDADVTDKLVLGYPRFVYHPFVKQLVDVWKAHAVEVGAIAAHEVVGALPFPSLGTAERCRRFLEDAHAHEP------GFPVNLHPVGVMDTYIVTFPSFAAGEAKAYWQHSGEILSSRKAARVLASL-------GHPVSTLVNGF--------PSAAPLSSXXXXXXXXXTAVGEARPGCY----RQALKERISA-LTGQREEDVYLTISGMAAIFKAFHICKQARPNRRVVVFGFTYLDTLKICLRKEWNSHGVHFLGRGDVADLKTLEGILKEEEIMAVFTEFPSNPLLQCPDLGKLTELGREYGFPVVVDDTISNFDNVDLMGAERGREGGGYGGIDMSVSSLTKLFSGKGDVMAGSLVLNGKSPSYKELRRAMEEGKEGGREGGLGDDAELYEEDAKVVWENGRDFEERSRRINETTRGLVEWLVGEEGVEEVSYP-SRTQKEIYDRFRRREGGYGGLFSVSLKEGLSPTAFYDALDVYKGPSLGTNFTLACPYTLLAHYNELDFARSHGVCPNLVRVSVGLEGLESLKEAFRVALEAAR 616
            +G PIP N  HAVSVT+P W+  V YEEG+  V  K+  GYPRF  H  +++L    +      G         A  FP+   A+RCR F+     H+         P N   V  +    V  P       K YWQH+GE +SSR     L          GH      N F         SA P+S             G    G +    ++AL++RIS+ +    + DV+L  +GM AIF A     +   + + + FGF Y+DTL I LRK     GVHFLG G+  D+  +E + KEE+I+A+F E PSNPLL+ PDL +L  L  +Y F ++VDDT+ N  N+D+           +   D+  SSLTK+FSG  +VM G +VLN KSP Y + +  +E   E            ++ EDA  +  N RDF ER+  IN+    +VE L     V++V YP +   K  Y+  +   GGYGGL S+ L +  S   F+D L   KGPSLGTNFTL CPY +LAHY ELDF  S GV  NLVR+SVGLE  E L   F  AL   +
Sbjct:   11 VGCPIPENTPHAVSVTLPTWEATVAYEEGEDWVVQKMSSGYPRFFVHSRIQELCAWAEQRYGRPGEC-------AWAFPTFEIAKRCRDFVRARSDHKKIRIMQLTTPHNDEGVPPVTIVFVFVPVALKPICKQYWQHTGEGISSRLGEFCLEEFSVIPKTDGHVKD--YNAFHGSKFEEKVSAKPISESAEMQTFVEERFGRNLDGKFAAEAKEALQKRISSQIKHCSQNDVFLYPTGMTAIFSAHRAILEIAGDHKSICFGFPYVDTLNI-LRK--FGPGVHFLGNGEDVDIDEVERLCKEEKILALFCEVPSNPLLKTPDLKRLRALADKYNFAIIVDDTVGNMLNIDV-----------HDYADVVASSLTKVFSGDSNVMGGCVVLNSKSPWYSKFQETLEHQYED----------TVWGEDAIYLERNSRDFAERNSHINQNAEAVVELLEKSPLVKKVFYPKTAPSKHHYEAIKTENGGYGGLVSIVLNDEDSAKRFFDTLQTAKGPSLGTNFTLTCPYAILAHYGELDFVESFGVDRNLVRISVGLEPKEELIRVFEKALSVCQ 549          
BLAST of NO12G03430 vs. NCBI_GenBank
Match: XP_001395073.2 (cystathionine gamma-synthase [Aspergillus niger CBS 513.88])

HSP 1 Score: 326.6 bits (836), Expect = 1.700e-85
Identity = 220/581 (37.87%), Postives = 307/581 (52.84%), Query Frame = 0
Query:   72 LGAPIPLN-DHAVSVTMPKWQHVVGYEEGDADVTDKLVLGYPRFVYHPFVKQLVDVWKAHAVEVGAIAAHEVVGALPFPSLGTAERCRRFLEDAHAHEPGFPVNLHPVGV------------MDTYI--VTFPSFAAGEAKAYWQHSGEILSSRKAARVLASL-----GHPVST--LVNGFPSAAPLSSXXXXXXXXXTAVGEARPGCYR-------------QALKERI--SALTGQREEDVYLTISGMAAIFKAFHICKQARPNRRVVVFGFTYLDTLKICLRKEWNSHGVHFLGRGDVADLKTLEG-ILKEEEIMAVFTEFPSNPLLQCPDLGKLTELGREYGFPVVVDDTISNFDNVDLMGAERGREGGGYGGIDMSVSSLTKLFSGKGDVMAGSLVLNGKSPSYKELRRAMEEGKEGGREGGLGDDAELYEEDAKVVWENGRDFEERSRRINETTRGLVEWLVGEEGVEEVSYPS-RTQKEIYDRFRRREGGYGGLFSVSLKEGLSPTAFYDALDVYKGPSLGTNFTLACPYTLLAHYNELDFARSHGVCPNLVRVSVGLEGLESLKEAFRVALEA 614
            +G P+P + DHAVSV++P W+  V YEEG++ V DK+  GYPRF  HP ++ L     A  + V    + E+  A+ FPSL T+  C  FL+     E   P N+  +               D+ +  V +P   A  AK  WQH+G  +SSR+A   L +L     G   +T  + +G      +            A G+AR    R             +AL+E+     + G  E DV+L  +GM++IF A  +   A+   + + FGF Y DTLKI   ++W   G  F G G   DL  LE  +LK E  +A+FTEFP NPLL+ PDL ++  L   Y F VVVD+T+ NF N++++              D+ VSSLTK+FSG  +VM GS VLN     Y  L+       E            L+ EDA  +  N RDF  R  +IN+TT  +   L     V++V YP   + K +Y+ FR + GGYGGLFSV+     +  AF+D L+V KGPSLGTNFTL+CPYTLLAHY+EL++A S GV  +LVR+SVGLE +  L++ F+ AL+A
Sbjct:    5 IGGPVPPHTDHAVSVSLPTWKANVAYEEGESWVVDKMQCGYPRFFIHPIIQDL-----AREI-VRRYGSPELETAILFPSLKTSGVCYSFLKSKILAEE--PCNVRTIDFALPIQGEDAPSGTDSILSCVIYPIQHAPIAKQVWQHTGNGISSRRAEFCLNALRDGTTGTNTTTRNMQDGREHVQFIEERFGRNLSTSLA-GQARLAVRRRIAGVLTADMELNEALEEKSGEGRVAGLTESDVFLFPTGMSSIFNAHQMLMAAKGEMKSICFGFPYTDTLKIL--QKWGP-GCLFYGHGSSEDLDDLESQLLKGERFLALFTEFPGNPLLKAPDLKRIRSLADRYNFAVVVDETVGNFLNINVLPY-----------ADIVVSSLTKIFSGDSNVMGGSAVLNPHGHYYGSLKNIFAREYED----------NLWAEDAVFLERNSRDFVSRIDKINKTTEDITAMLEDSPLVKQVYYPKYNSSKPLYEAFRNQSGGYGGLFSVTFHSTAAAVAFFDHLEVLKGPSLGTNFTLSCPYTLLAHYSELEWASSFGVDFDLVRISVGLEDVSDLRQRFQQALKA 552          
BLAST of NO12G03430 vs. NCBI_GenBank
Match: ESK84433.1 (cystathionine gamma-synthase [Moniliophthora roreri MCA 2997] >KTB35903.1 hypothetical protein WG66_11520 [Moniliophthora roreri])

HSP 1 Score: 326.6 bits (836), Expect = 1.700e-85
Identity = 224/622 (36.01%), Postives = 309/622 (49.68%), Query Frame = 0
Query:   71 TLGAPIPLN-DHAVSVTMPKWQHVVGYEEGDADVTDKLVLGYPRFVYHPFVKQLVDVWKAHAVEVGAIAAHEVVGALPFPSLGTAERCRRFLEDAHAHEPGFPVNLHPV-------------------GVMDTYIVTFPSFAAGEAKAYWQHSGEILSSRKAARVLASL------------------------GHPVSTLVNGFPSAAPLSSXXXXXXXXXTAVGE--------ARPGCYRQALKERISALTGQREE------------DVYLTISGMAAIFKAFHICKQARPNRRVVVFGFTYLDTLKICLRKEWNSHGVHFLGRGDVADLKTLEGILKEE--------EIMAVFTEFPSNPLLQCPDLGKLTELGREYGFPVVVDDTISNFDNVDLMGAERGREGGGYGGIDMSVSSLTKLFSGKGDVMAGSLVLNGKSPSYKELRRAMEEGKEGGREGGLGDDAELYEEDAKVVWENGRDFEERSRRINETTRGLVEWLVGEEG------VEEVSYPSRTQKEIYDRFRRREGGYGGLFSVSLKEGLSPTAFYDALDVYKGPSLGTNFTLACPYTLLAHYNELDFARSHGVCPNLVRVSVGLEGLESLKEAFRVALEAA 615
            TLG+P+P N  HA+SV++P W+  V YEEG+  V +K+V GYPRF  HP +++L  + +   ++ GA    +    L FP+   AE CR F++   +      + + P                     ++D +IV FPS     AK +WQH+G  +SSR A   L  L                         + V     GF S  P            T + E        A     ++AL+ RI+    + +E            DVYL  SGM AI+ A  +    RP  + V FGF Y DTLK+   ++W   G HF G G  +D+  LE +L+ E         I+A+FTEFPSNPLL+  DL +L +L  +Y F +V+D+TI NF NV ++              D+ VSSLTK+FSG  +VM GSLVLN +   Y  L+  M+   E         DA  +++DA  +  N RDF  R + I+     +  +L   +       ++EV YP     E Y R R   GG GGLFSV+     +  AF+DAL VYKGPSLGTNFTLACP+T+LAHY EL +A  +GV   LVR+SVG+E    L EAF VAL+AA
Sbjct:    4 TLGSPVPPNTPHAISVSLPTWRDNVDYEEGERRVVEKMVCGYPRFFIHPSIQKLASICE---LKFGA----QGESCLLFPTKNVAEECRAFIQHRSSKARLIQLLICPEDKEKANMLVNSDQDCGCNDSLVDLHIVLFPSDDFPIAKQFWQHAGSGISSRLAEHCLGLLPDTSPPTTPTAAVTPIPAKKVHNRHYSVKESAKGFSSPPPSPMAETLSKDQATYLEERYGRNLPIASAAIAKRALRRRIAGTLVRDDEETAKIKGRVCENDVYLFPSGMNAIWNAHQLALSTRPQAKSVCFGFPYTDTLKVL--QKWGP-GCHFFGHGLDSDIDQLEALLEAETKSNPSTPPILALFTEFPSNPLLRSADLPRLRKLADKYDFLIVIDETIGNFINVQVLPY-----------ADVVVSSLTKVFSGASNVMGGSLVLNPQGRHYSVLKAYMDATHE--------RDA-YFDQDAIFLERNSRDFARRCKIIDANADAICTFLYNHKSNSPNSPIKEVFYPKYITPEHYSRCRLPGGGDGGLFSVTFTSKKASEAFFDALPVYKGPSLGTNFTLACPFTILAHYTELVWAGEYGVEEGLVRISVGMEETPKLLEAFDVALKAA 595          
The following BLAST results are available for this feature:
BLAST of NO12G03430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_012194614.11.000e-8738.90hypothetical protein SPRG_01022 [Saprolegnia paras... [more]
GBG29388.13.000e-8738.71Cystathionine gamma-lyase [Aurantiochytrium sp. FC... [more]
XP_023471343.15.200e-8738.01PLP-dependent transferase [Rhizopus microsporus AT... [more]
ORX49114.11.500e-8638.47PLP-dependent transferase [Hesseltinella vesiculos... [more]
EIE87144.12.000e-8637.76hypothetical protein RO3G_11855 [Rhizopus delemar ... [more]
OQS00443.14.400e-8638.27cystathionine gamma-synthase [Achlya hypogyna][more]
OQS06771.17.500e-8638.20cystathionine gamma-synthase [Thraustotheca clavat... [more]
XP_502938.19.800e-8637.76YALI0D17402p [Yarrowia lipolytica CLIB122] >CAG811... [more]
XP_001395073.21.700e-8537.87cystathionine gamma-synthase [Aspergillus niger CB... [more]
ESK84433.11.700e-8536.01cystathionine gamma-synthase [Moniliophthora rorer... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010304NSK010304Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03430.1NO12G03430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|625734gene_5516Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100222g5gene4814Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03430.1NO12G03430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03430 ID=NO12G03430|Name=NO12G03430|organism=Nannochloropsis oceanica|type=gene|length=1947bp
ACAGGCTATACTAACAGGGCATTACGTCAAGCAGCTGGGGGATTGTTTCG
AATGCTCCGCCGGCCTCTGTTGTGCTTGTACGGCCACGCTGCGAGGCCAG
AACCATCAGTGTTGCCATCATCATCAACGCTTGCTCGCGCTTTGACCTCC
GTCACTGCCACTGCTAGTACCCAGTCCTTTCATAAAATATGCACGCGGCC
CTTGCCAACACCAAGGCAAAGATACCGCCACACCGATGCCACTGCAGTAC
AGCTGCGGAAGACGCTGGGTGCGCCCATCCCCTTGAATGACCACGCCGTG
TCCGTGACCATGCCCAAGTGGCAGCACGTGGTGGGTTACGAGGAAGGCGA
CGCCGACGTGACCGACAAGCTTGTGCTAGGATACCCCCGCTTTGTCTACC
ATCCGTTCGTGAAGCAATTGGTTGATGTGTGGAAGGCACATGCTGTCGAG
GTAGGCGCCATCGCCGCACATGAAGTGGTTGGGGCCCTGCCCTTCCCCTC
ACTAGGTACAGCGGAGCGTTGCCGTCGTTTCCTGGAAGATGCGCACGCGC
ACGAGCCAGGGTTTCCTGTGAATTTGCATCCTGTGGGTGTCATGGACACT
TACATTGTCACATTCCCCTCTTTTGCCGCAGGAGAGGCGAAGGCATACTG
GCAACACAGTGGGGAAATCTTGTCCTCGCGCAAGGCCGCGCGGGTGCTGG
CGTCGTTGGGTCATCCTGTCTCTACCTTGGTCAACGGCTTCCCATCTGCT
GCCCCTCTCTCCTCCTCTACTTCGTCCTCTACTGTAGCTGCAACGGCAGT
GGGCGAGGCAAGGCCTGGGTGCTACCGACAGGCCTTGAAGGAACGAATAA
GCGCCTTGACCGGTCAACGGGAGGAAGACGTGTACCTGACAATCAGTGGC
ATGGCCGCCATCTTCAAGGCATTCCATATATGCAAGCAAGCCCGTCCGAA
CCGTCGGGTGGTGGTGTTCGGCTTCACCTACCTCGACACCCTCAAGATTT
GTCTACGGAAGGAGTGGAACAGTCATGGGGTCCATTTCCTGGGAAGGGGC
GACGTCGCCGATCTCAAGACACTCGAGGGCATCCTGAAAGAAGAGGAGAT
TATGGCGGTGTTCACCGAGTTTCCTTCAAATCCCTTGCTCCAGTGTCCAG
ATCTGGGGAAATTAACGGAGCTGGGGAGGGAGTATGGGTTCCCGGTGGTG
GTGGATGACACGATTTCGAACTTTGACAATGTGGATCTGATGGGAGCCGA
ACGAGGGAGGGAGGGCGGGGGGTATGGAGGGATAGACATGAGTGTCAGTA
GCTTGACGAAGCTGTTTTCGGGCAAGGGGGATGTGATGGCCGGTAGTTTG
GTGTTGAACGGCAAGAGCCCTTCATATAAGGAGTTGAGGCGGGCGATGGA
GGAAGGGAAAGAGGGGGGGAGGGAGGGAGGGTTAGGGGACGATGCAGAGT
TGTATGAGGAGGACGCAAAGGTTGTATGGGAGAACGGGAGGGATTTTGAG
GAAAGGTCGAGGAGAATCAACGAGACGACGAGGGGGCTGGTAGAATGGCT
GGTGGGGGAGGAGGGGGTGGAGGAAGTGTCTTACCCCAGTAGGACCCAAA
AAGAGATATACGATCGCTTCCGACGGAGGGAGGGAGGATACGGGGGACTC
TTTTCTGTGTCGTTGAAGGAGGGGCTGTCGCCGACGGCGTTTTATGATGC
CTTGGACGTGTATAAAGGGCCTAGTCTGGGAACGAATTTCACGCTGGCAT
GCCCATACACCCTCCTCGCCCACTACAACGAGCTGGACTTCGCAAGGAGT
CACGGCGTGTGCCCGAATCTGGTGCGGGTGTCGGTGGGTTTGGAAGGATT
GGAGAGCTTGAAGGAGGCGTTCAGGGTGGCCCTGGAAGCGGCAAGAAAGC
CGTTGCCGGAGAATGGATTGTACTTCCCACCGGGCTTGAGGATGTAG
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protein sequence of NO12G03430.1

>NO12G03430.1-protein ID=NO12G03430.1-protein|Name=NO12G03430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=632bp
MLRRPLLCLYGHAARPEPSVLPSSSTLARALTSVTATASTQSFHKICTRP
LPTPRQRYRHTDATAVQLRKTLGAPIPLNDHAVSVTMPKWQHVVGYEEGD
ADVTDKLVLGYPRFVYHPFVKQLVDVWKAHAVEVGAIAAHEVVGALPFPS
LGTAERCRRFLEDAHAHEPGFPVNLHPVGVMDTYIVTFPSFAAGEAKAYW
QHSGEILSSRKAARVLASLGHPVSTLVNGFPSAAPLSSSTSSSTVAATAV
GEARPGCYRQALKERISALTGQREEDVYLTISGMAAIFKAFHICKQARPN
RRVVVFGFTYLDTLKICLRKEWNSHGVHFLGRGDVADLKTLEGILKEEEI
MAVFTEFPSNPLLQCPDLGKLTELGREYGFPVVVDDTISNFDNVDLMGAE
RGREGGGYGGIDMSVSSLTKLFSGKGDVMAGSLVLNGKSPSYKELRRAME
EGKEGGREGGLGDDAELYEEDAKVVWENGRDFEERSRRINETTRGLVEWL
VGEEGVEEVSYPSRTQKEIYDRFRRREGGYGGLFSVSLKEGLSPTAFYDA
LDVYKGPSLGTNFTLACPYTLLAHYNELDFARSHGVCPNLVRVSVGLEGL
ESLKEAFRVALEAARKPLPENGLYFPPGLRM*
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Synonyms
Publications