NO12G03330, NO12G03330 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G03330
Unique Name	NO12G03330
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2575
Alignment location	chr12:914309..916883 -

Link to JBrowse

Properties


Property Name	Value
Description	Nucleosome assembly protein 1;1

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:914309..916883 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly
GO:0006334	nucleosome assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR037231	NAP-like_sf
IPR002164	NAP_family

Homology

[Close]

BLAST of NO12G03330 vs. NCBI_GenBank
Match: BAK04589.1 (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 158.3 bits (399), Expect = 5.500e-35
Identity = 85/259 (32.82%), Postives = 140/259 (54.05%), Query Frame = 0

Query:  137 EPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            E L+P V+ R+++L+ +Q Q D                          KR  I++G V+V+   +  E   +   EGGD    G+P FWL A+  + +L   I+E D P LK+L DI+ +  +D  GF+L+F F  NP+F N+VL+K+Y   ++++++D +LE   GT I W   K       K+   KG      + K  + +SFF++F+   +PE  E +DE+  +EL  Q++ DY + ST+R++I+P A+ W+ GE
Sbjct:   52 ESLSPNVRTRVEFLRGIQSQHDEIEAKFFEERAALEAKYQKLYEPLYAKRYDIVNGVVEVDGVVK--EPTTENAAEGGDSDAKGIPDFWLTALKTNEVLTEEIQERDEPVLKYLKDIKWSRIDDPKGFKLEFFFDTNPFFKNSVLTKTY---HMVDEDDPILEKAIGTEIEWYPGKNVTQKILKKKPKKGSKNTKPITKTEECESFFNFFSPPQVPEDDEDIDEDAADELQGQMEHDYDIGSTIRDKIIPHAVSWFTGE 305

[Close]

BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_020873580.1 (nucleosome assembly protein 1;1 isoform X2 [Arabidopsis lyrata subsp. lyrata] >EFH45887.1 hypothetical protein ARALYDRAFT_492203 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 157.9 bits (398), Expect = 7.200e-35
Identity = 91/269 (33.83%), Postives = 144/269 (53.53%), Query Frame = 0

Query:  130 GAREEDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMK---PKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            G R +  E L P V+ R+D L+++Q Q D                          KR  I++G  +VE    A E I  + GE    +E GVP FWL A+ N+ ++   + E D  ALK+L DI+    E+  GF+L+F F  NPYF N VL+KSY   +++++++ +LE   GT I+W   K   C+ +K +K    KG      ++K    +SFF++F+   +P+  E +DEE  E+L   ++ DY + ST+R++I+P A+ W+ GE
Sbjct:   38 GQRSDVLENLTPIVRKRVDALRDIQSQHDELEAKFREERAILEAKYQKLYQPLYTKRYEIVNGTTEVEL---AAEDIKVDQGEEKTAEEKGVPSFWLTALKNNDVISEEVTERDEGALKYLKDIKWCKIEEPKGFKLEFFFDTNPYFKNTVLTKSY---HMIDEDEPLLEKATGTEIDWYPGK---CLTQKILKKKPKKGSKNAKPIIKTEDCESFFNFFSPPEVPDEDEDIDEERAEDLQNLMEQDYDIGSTIRDKIIPRAVSWFTGE 297

[Close]

BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_015644391.1 (PREDICTED: nucleosome assembly protein 1;1 isoform X1 [Oryza sativa Japonica Group])

HSP 1 Score: 157.9 bits (398), Expect = 7.200e-35
Identity = 101/319 (31.66%), Postives = 163/319 (51.10%), Query Frame = 0

Query:   81 MADDKNNTEAKEASPFANTTFSFTAPQGGASAPFPNLAGFSQALASAAE---GAREEDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKP-KGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            M  DK N +  +         + + P   A+    + AG   AL    +   G   +  E L+P V+ R++YL+ +Q Q D                          KR  I++G V+V+   +  E  ++   EG D    GVP FWL AM  + +L   I+E D PALK+L DI+ A  +D  GF+LDF F  NP+F N+VL+K+Y   +++++++ +LE   GT I W    KNL  +  + KP KG      + K    +SFF++F+   +P+  E +DE+  +EL  Q++ DY + +T+R++I+P A+ W+ GE
Sbjct:    1 MGGDKENLDLSD--------LNASLPAAAAALSAEDRAGLVNALKDKLQSLAGQHTDVLEALSPNVRKRVEYLREIQGQHDEIELKFFEERAALEAKYQKLYEPLYTKRYNIVNGVVEVDGGND--EPASENAAEGKDADAKGVPDFWLTAMKTNEVLSEEIQERDEPALKYLKDIKWARIDDPKGFKLDFFFDTNPFFKNSVLTKTY---HMVDEDEPILEKAIGTEIEW-YPGKNLTQKILKKKPKKGSKNAKPITKTEVCESFFNFFSPPQVPDDDEDIDEDTADELQGQMEHDYDIGTTIRDKIIPHAVSWFTGE 305

[Close]

BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_020873579.1 (nucleosome assembly protein 1;1 isoform X1 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 157.9 bits (398), Expect = 7.200e-35
Identity = 91/269 (33.83%), Postives = 144/269 (53.53%), Query Frame = 0

Query:  130 GAREEDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMK---PKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            G R +  E L P V+ R+D L+++Q Q D                          KR  I++G  +VE    A E I  + GE    +E GVP FWL A+ N+ ++   + E D  ALK+L DI+    E+  GF+L+F F  NPYF N VL+KSY   +++++++ +LE   GT I+W   K   C+ +K +K    KG      ++K    +SFF++F+   +P+  E +DEE  E+L   ++ DY + ST+R++I+P A+ W+ GE
Sbjct:   38 GQRSDVLENLTPIVRKRVDALRDIQSQHDELEAKFREERAILEAKYQKLYQPLYTKRYEIVNGTTEVEL---AAEDIKVDQGEEKTAEEKGVPSFWLTALKNNDVISEEVTERDEGALKYLKDIKWCKIEEPKGFKLEFFFDTNPYFKNTVLTKSY---HMIDEDEPLLEKATGTEIDWYPGK---CLTQKILKKKPKKGSKNAKPIIKTEDCESFFNFFSPPEVPDEDEDIDEERAEDLQNLMEQDYDIGSTIRDKIIPRAVSWFTGE 297

[Close]

BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_015644392.1 (PREDICTED: nucleosome assembly protein 1;1 isoform X2 [Oryza sativa Japonica Group] >Q5VND6.1 RecName: Full=Nucleosome assembly protein 1;1; Short=OsNAP1;1; AltName: Full=Nucleosome assembly protein 1-like 1; Short=OsNAP1_L1; Flags: Precursor >BAD68630.1 putative nucleosome assembly protein 1 [Oryza sativa Japonica Group] >BAD69039.1 putative nucleosome assembly protein 1 [Oryza sativa Japonica Group] >BAF18730.1 Os06g0149400 [Oryza sativa Japonica Group] >BAG92354.1 unnamed protein product [Oryza sativa Japonica Group] >EEE65092.1 hypothetical protein OsJ_20136 [Oryza sativa Japonica Group] >BAS96173.1 Os06g0149400 [Oryza sativa Japonica Group])

HSP 1 Score: 157.9 bits (398), Expect = 7.200e-35
Identity = 101/319 (31.66%), Postives = 163/319 (51.10%), Query Frame = 0

Query:   81 MADDKNNTEAKEASPFANTTFSFTAPQGGASAPFPNLAGFSQALASAAE---GAREEDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKP-KGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            M  DK N +  +         + + P   A+    + AG   AL    +   G   +  E L+P V+ R++YL+ +Q Q D                          KR  I++G V+V+   +  E  ++   EG D    GVP FWL AM  + +L   I+E D PALK+L DI+ A  +D  GF+LDF F  NP+F N+VL+K+Y   +++++++ +LE   GT I W    KNL  +  + KP KG      + K    +SFF++F+   +P+  E +DE+  +EL  Q++ DY + +T+R++I+P A+ W+ GE
Sbjct:    1 MGGDKENLDLSD--------LNASLPAAAAALSAEDRAGLVNALKDKLQSLAGQHTDVLEALSPNVRKRVEYLREIQGQHDEIELKFFEERAALEAKYQKLYEPLYTKRYNIVNGVVEVDGGND--EPASENAAEGKDADAKGVPDFWLTAMKTNEVLSEEIQERDEPALKYLKDIKWARIDDPKGFKLDFFFDTNPFFKNSVLTKTY---HMVDEDEPILEKAIGTEIEW-YPGKNLTQKILKKKPKKGSKNAKPITKTEVCESFFNFFSPPQVPDDDEDIDEDTADELQGQMEHDYDIGTTIRDKIIPHAVSWFTGE 305

[Close]

BLAST of NO12G03330 vs. NCBI_GenBank
Match: NP_001349524.1 (uncharacterized protein LOC100501318 [Zea mays] >AQK80411.1 Nucleosome assembly protein 1 [Zea mays])

HSP 1 Score: 157.5 bits (397), Expect = 9.500e-35
Identity = 98/308 (31.82%), Postives = 160/308 (51.95%), Query Frame = 0

Query:   92 EASPFANTTFSFTAPQGGASAPFPNLAGFSQALASAAE---GAREEDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKP-KGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            E  P+  +  + + P   A+    + AG   AL    +   G   +  E L+P V+ R+++L+ +Q Q D                          KR  I++G+V+V+   +  E  + +  EG +    GVP FWL AM  + +L   I+E D  ALK+L DI+ +  ED  GF+LDF F  NP+  N+VL+K+Y   ++++++D +LE   GT I W    KNL  +  + KP KG     ++ K    +SFF++F    +PE  E +DE+  EEL  Q++ DY + +T+R++I+P A+ W+ GE
Sbjct:    4 ENEPYVISDLNASLPAAAAALSAEDRAGLVNALKDKLQSLAGQHADVLETLSPNVRKRVEFLRGIQSQHDEIEAKFFEERVALEAKYQKLYEPLYTKRYEIVNGEVEVDGVSD--EQTSDDTAEGKEPVAKGVPEFWLTAMKTNEVLSEEIQERDEAALKYLKDIKWSRIEDPKGFKLDFFFDTNPFIKNSVLTKTY---HMVDEDDLILEKAIGTEIEW-YPGKNLTQKILKKKPKKGSKNTKLITKTEDCESFFNFFDPPQVPEDDEDIDEDTAEELQGQMEHDYDIGTTIRDKIIPHAVSWFTGE 305

[Close]

BLAST of NO12G03330 vs. NCBI_GenBank
Match: AQK80410.1 (Nucleosome assembly protein 1 [Zea mays])

HSP 1 Score: 157.5 bits (397), Expect = 9.500e-35
Identity = 98/308 (31.82%), Postives = 160/308 (51.95%), Query Frame = 0

Query:   92 EASPFANTTFSFTAPQGGASAPFPNLAGFSQALASAAE---GAREEDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKP-KGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            E  P+  +  + + P   A+    + AG   AL    +   G   +  E L+P V+ R+++L+ +Q Q D                          KR  I++G+V+V+   +  E  + +  EG +    GVP FWL AM  + +L   I+E D  ALK+L DI+ +  ED  GF+LDF F  NP+  N+VL+K+Y   ++++++D +LE   GT I W    KNL  +  + KP KG     ++ K    +SFF++F    +PE  E +DE+  EEL  Q++ DY + +T+R++I+P A+ W+ GE
Sbjct:    4 ENEPYVISDLNASLPAAAAALSAEDRAGLVNALKDKLQSLAGQHADVLETLSPNVRKRVEFLRGIQSQHDEIEAKFFEERVALEAKYQKLYEPLYTKRYEIVNGEVEVDGVSD--EQTSDDTAEGKEPVAKGVPEFWLTAMKTNEVLSEEIQERDEAALKYLKDIKWSRIEDPKGFKLDFFFDTNPFIKNSVLTKTY---HMVDEDDLILEKAIGTEIEW-YPGKNLTQKILKKKPKKGSKNTKLITKTEDCESFFNFFDPPQVPEDDEDIDEDTAEELQGQMEHDYDIGTTIRDKIIPHAVSWFTGE 305

[Close]

BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_020179921.1 (nucleosome assembly protein 1;1 isoform X2 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 157.5 bits (397), Expect = 9.500e-35
Identity = 94/293 (32.08%), Postives = 151/293 (51.54%), Query Frame = 0

Query:  106 PQGGASAPFPNLAGFSQALASAAE---GAREEDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKKDSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            P   A+    +  G   AL    +   G   +  E L+P V+ R+++L+ +Q Q D                          KR  I++G V+V+    A E  ++   EGGD    GVP FWL A+  + +L   I+E D P LK+L DI+ +  +D  GF+L+F F  NP+F N+VL+KSY   ++++++D +LE   GT I W   K       K+   KG      + K  + +SFF++F+   +P+  E +DEE  +EL  Q++ DY + ST+R++I+P A+ W+ GE
Sbjct:   18 PAAAAALSAEDRVGLVNALKDKLQSLAGQHADVLESLSPNVRTRVEFLRGIQSQHDEIETKFFEERAALEAKYQKLYEPLYAKRYDIVNGVVEVD--GVAKEPTSENAAEGGDSDAKGVPDFWLTALKTNDVLTEEIQERDEPVLKYLKDIKWSRIDDPKGFKLEFFFDTNPFFKNSVLTKSY---HMVDEDDPILEKAIGTEIEWYPGKNVTQKILKKKPKKGSKNTKPITKTEECESFFNFFSPPQVPDDDEDIDEEAADELQGQMEHDYDIGSTIRDKIIPHAVSWFTGE 305

[Close]

BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_020585055.1 (nucleosome assembly protein 1;1-like isoform X1 [Phalaenopsis equestris] >XP_020585056.1 nucleosome assembly protein 1;1-like isoform X1 [Phalaenopsis equestris])

HSP 1 Score: 157.5 bits (397), Expect = 9.500e-35
Identity = 103/315 (32.70%), Postives = 161/315 (51.11%), Query Frame = 0

Query:   88 TEAKEASPFANTTFSFTAPQGGASAPFPNLAGFSQALASAAEGARE---EDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKK----DSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            +E+K+         S   P   A       AG   AL S  +   E   E  E L+P+V+ R++ L+++Q +                            KR  I++G  +V   E A  T A++    G     GVP FWL A+  + ++   I E D  ALK L DI+C+  +D  GF+L+F F PNPYF N+VLSK+Y   ++++D+D +LE   GT I W   K   C+ +K +K K K +G    K V K    +SFF++F+   +PE  + +DE+  E+L +Q++ DY + ST+R++I+P A+ W+ GE
Sbjct:    2 SESKKQGDLNTADLSSALPSTTAGLNAEERAGLVDALKSKLQSLAELHVEAMETLSPKVKKRVEVLRDIQARHGELESKFHEERAALEAKYQKLYEPLYTKRYEIVNGMAEVVADESAEATAAEDKTNEG----KGVPDFWLTALKTNEVVSEEIHERDEDALKHLKDIRCSKLDDPKGFKLEFFFNPNPYFKNSVLSKTY---HMIDDDDPILEKAVGTEIEWFPGK---CLTQKVLKKKPK-KGSKKTKPVTKTEVCESFFNFFSPPKVPEDDDELDEDTAEQLQDQMEQDYDIGSTIRDKIIPHAVSWFTGE 305

[Close]

BLAST of NO12G03330 vs. NCBI_GenBank
Match: XP_020585057.1 (nucleosome assembly protein 1;1-like isoform X2 [Phalaenopsis equestris])

HSP 1 Score: 157.5 bits (397), Expect = 9.500e-35
Identity = 103/315 (32.70%), Postives = 161/315 (51.11%), Query Frame = 0

Query:   88 TEAKEASPFANTTFSFTAPQGGASAPFPNLAGFSQALASAAEGARE---EDDEPLAPEVQVRIDYLKNLQEQRDXXXXXXXXXXXXXXXXXXXXXXXXXXKRRAILSGDVDVEKKEEAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFLTDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLESTEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKK----DSFFHWFTAVNIPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGE 396
            +E+K+         S   P   A       AG   AL S  +   E   E  E L+P+V+ R++ L+++Q +                            KR  I++G  +V   E A  T A++    G     GVP FWL A+  + ++   I E D  ALK L DI+C+  +D  GF+L+F F PNPYF N+VLSK+Y   ++++D+D +LE   GT I W   K   C+ +K +K K K +G    K V K    +SFF++F+   +PE  + +DE+  E+L +Q++ DY + ST+R++I+P A+ W+ GE
Sbjct:    2 SESKKQGDLNTADLSSALPSTTAGLNAEERAGLVDALKSKLQSLAELHVEAMETLSPKVKKRVEVLRDIQARHGELESKFHEERAALEAKYQKLYEPLYTKRYEIVNGMAEVVADESAEATAAEDKTNEG----KGVPDFWLTALKTNEVVSEEIHERDEDALKHLKDIRCSKLDDPKGFKLEFFFNPNPYFKNSVLSKTY---HMIDDDDPILEKAVGTEIEWFPGK---CLTQKVLKKKPK-KGSKKTKPVTKTEVCESFFNFFSPPKVPEDDDELDEDTAEQLQDQMEQDYDIGSTIRDKIIPHAVSWFTGE 305

The following BLAST results are available for this feature:

BLAST of NO12G03330 vs. NCBI_GenBank

BLAST of NO12G03330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
BAK04589.1	5.500e-35	32.82	predicted protein [Hordeum vulgare subsp. vulgare]	[more]
XP_020873580.1	7.200e-35	33.83	nucleosome assembly protein 1;1 isoform X2 [Arabid...	[more]
XP_015644391.1	7.200e-35	31.66	PREDICTED: nucleosome assembly protein 1;1 isoform...	[more]
XP_020873579.1	7.200e-35	33.83	nucleosome assembly protein 1;1 isoform X1 [Arabid...	[more]
XP_015644392.1	7.200e-35	31.66	PREDICTED: nucleosome assembly protein 1;1 isoform...	[more]
NP_001349524.1	9.500e-35	31.82	uncharacterized protein LOC100501318 [Zea mays] >A...	[more]
AQK80410.1	9.500e-35	31.82	Nucleosome assembly protein 1 [Zea mays]	[more]
XP_020179921.1	9.500e-35	32.08	nucleosome assembly protein 1;1 isoform X2 [Aegilo...	[more]
XP_020585055.1	9.500e-35	32.70	nucleosome assembly protein 1;1-like isoform X1 [P...	[more]
XP_020585057.1	9.500e-35	32.70	nucleosome assembly protein 1;1-like isoform X2 [P...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL124	nonsL124	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR014	ncniR014	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR007	ngnoR007	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR006	ngnoR006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK010291	NSK010291	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO12G03330.1	NO12G03330.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|592773	gene_5508	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100333g2	gene4806	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO12G03330.1	NO12G03330.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO12G03330 ID=NO12G03330|Name=NO12G03330|organism=Nannochloropsis oceanica|type=gene|length=2575bp
ATAATTTATCGCATCTCTAAATTATGCTTTTTGGCTGTGTTGGTCATTTT
CCTTCTCCAGTGCTTATCAAATGCGAGGACACTAATTCGACTCCATGGAA
GGGGTTCTGGTGGGGAGGTTGGTCGTGGAAACCAAGAAAAGACCATACAA
CACACGATAACGAAGCAACAGGCAGAGGCCTTGAACATTTATCAAGCTTA
AAAGGTCATGCACATTGTCCATACGACTTGAAAGGGATAAAATTTTGGGC
ATGAATTTAGAGTACAAGTATGAGCTGTGGCTCAACGGGTGGTGGCCACA
CCCTTTCCACGGAATCAGAACATACAACCCCAGCATCACCACGAGCATTG
GAAGCAGCACGATTGTCGGAAGGCTCGCGAAAATTGGCAATGCGGACCAA
GCAAGTTTCTTGGCTTCCCACTCTCCAACGCTCTCTTATCGAACAACATT
TAAGCTACACCATACACCCCACAACGCGCGCGACACAGGCAGCCACTCAA
AAAATAACCATGGCTGACGACAAGAATAACACGGAGGCGAAAGAGGCGAG
TCCCTTTGCCAACACCACCTTCTCCTTTACGGCCCCTCAAGGTGGGGCCT
CTGCCCCTTTCCCCAATTTGGCCGGATTCAGCCAGGCCTTGGCTTCGGCA
GCAGAGGGTGCACGGGAGGAGGATGACGAGCCGCTTGCGCCCGAAGTACA
Ggttagaaaaaaatagcctcggtggtggtatgtacagacggctggcaagt
gtagcgtttatgcaggagtacggggacggcttcggaatcactgatcttca
cgtcatgtctctcgtcacatttgtgttttaatcgctcactcaccacattc
catctaccgcacacatcaaacccttccgtttttattttttttaagGTCCG
TATTGACTACCTGAAGAACTTGCAAGAGCAACGTGACGAGTTCATGAAGG
CCTTCCACGAGGAACGGAAAGCCCTGGTAAAGAAATATGAGGCGCTTTCT
GCCCCCTTGCTCGACAAACGCCGCGCCATCCTGTCGGGGGATGTCGACGT
GGAGAAGAAGGAGGAGGCCTGGGAGACGATTGCGAAGGAAGGCGGCGAGG
GAGGCGACGTAAAGGAGGCGGGAGTTCCTCATTTTTGGTTGCAGGCCATG
GTGAACAGTCGCTTGTTGCGAGGCATGATCGAGGAGGATGACGTGCCGGC
ACTTAAATTTTTGACAGACATTCAGTGTGCGGATAAAGAGGATGGGACAG
GCTTTCAGTTGGATTTCCACTTCGCCCCTAACCCTTACTTTACGAATGCG
GTATTGTCCAAGAGTTATGTCGTGCCCAACCTAATGGAGGATGAAGACGC
CATGTTGGAGTCTACTGAAGGGACGACAATCAATTGGACGTCAACCAAGA
AGAATCTTTGTGTGGAGGAGAAGAGGATGAAACCCAAAGGGAAGAGCCGT
GGAGGTGTGGTGCTCAAGCAGGTGAAGAAGGATAGTTTTTTCCATTGGTT
TACGGCAGTTAATATACCCGAGAGCCCGGAAGGGGTGGACGAGGAGGAGT
ATGAGGAGTTGATGGAACAGgtgcgagtggggaggggaggaagggaggat
gtaaagggataattttgtatagtgaaatgctcactttttctttttttccc
caaccaccagCTTGACCTAGACTATGCCGTCGCCTCTACGCTACGTGAGG
AAATCGTGCCGGAGGCCATCAAGTGGTACCTCGGGGAGGGAGATGATGAA
GAGAGCGAGGATGGTGATTACGAGGAGGAGAGTTCTGAGGAGAGTGAAAG
CGACCCGGAAAGCAGTGACGACGAGCCGCCGCCGCAGCCGgtacgtggat
ggcgaggaaattgagtgggaaagggaggaaggggtgggggtatgaggatg
gagagagagggaagacgactcttcgagggctaaatagtactattgcactt
caattctacatctcgatactaacatatcaacagGCCGGAGGACGGTATCC
TCGTCAGGCGGGGCGGCCGCGGCGTGGTGGGCGTTAGAACGCTTGTGGAA
GCTGTGACAGCGGAGGATAGGGGAGAAATACATTTAGCTTTGAAACAATC
AAGATTTGTTTTTACACTCGCATGCGAGGCGGCCACAAGTACAGCAGCAG
AAGCATCAGCCAAAAAAAAAACAAGCAGAGGGAAGGGGGAAAAGAGAAGG
ATAAAGAAAGGGAATGGGCAGGGCAGAGATGTAGATGGCCAAGGCCAAAG
AAAAATTGCGATTATATTCTCAATCATCATCTACTAGAAGAAAGAATTAC
ACCATTGGTCGACATCTTATTCTTGACTATATCTGTATTTGAATTCCCGT
TCAAATCGCCGTTGCCCCAACGCATCTTCGCGAATTCGTTTGCACTCAAG
AAGACAATAATCACGGTGCACGGTCCACGGGGGGGTTCTCACTCTTGTGT
ATGCGCTCGTCTATTTCTTTGTACTTTCGCCCTTAGCAAGCTGGTTTTGA
AAGCAGTCGTTTGTCTGTTTAATGCTCACAATACAACTCCCCCATGCTTG
CTTCTTTCTCCACCTCCACCTAACG

protein sequence of NO12G03330.1

>NO12G03330.1-protein ID=NO12G03330.1-protein|Name=NO12G03330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MSCGSTGGGHTLSTESEHTTPASPRALEAARLSEGSRKLAMRTKQVSWLP
TLQRSLIEQHLSYTIHPTTRATQAATQKITMADDKNNTEAKEASPFANTT
FSFTAPQGGASAPFPNLAGFSQALASAAEGAREEDDEPLAPEVQVRIDYL
KNLQEQRDEFMKAFHEERKALVKKYEALSAPLLDKRRAILSGDVDVEKKE
EAWETIAKEGGEGGDVKEAGVPHFWLQAMVNSRLLRGMIEEDDVPALKFL
TDIQCADKEDGTGFQLDFHFAPNPYFTNAVLSKSYVVPNLMEDEDAMLES
TEGTTINWTSTKKNLCVEEKRMKPKGKSRGGVVLKQVKKDSFFHWFTAVN
IPESPEGVDEEEYEELMEQLDLDYAVASTLREEIVPEAIKWYLGEGDDEE
SEDGDYEEESSEESESDPESSDDEPPPQPAGGRYPRQAGRPRRGGR*

Synonyms

Publications