NO12G02740, NO12G02740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_003057492.1 (ran-binding dexh-box helicase [Micromonas pusilla CCMP1545] >EEH59137.1 ran-binding dexh-box helicase [Micromonas pusilla CCMP1545]) HSP 1 Score: 554.3 bits (1427), Expect = 8.400e-154 Identity = 298/602 (49.50%), Postives = 386/602 (64.12%), Query Frame = 0 Query: 352 GGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDFGXXXXXXXDGGRVDEEAPNDTAMEF--MEGVVRRSDL 952 GG +LPA +L +Q+T ++WLWE++ Q AGG++GDEMGLGKTVQV+AFL L+RSG L LIV PAT++ QW EL AWAP L +LH SA + A++ A + + + + + R V LTTYE L+++R LL W Y LDEG KIRNPDA++T+CAKQL TVHRL+++G PIQN L ELWSLFDFCFPG+LGTLP F+ + A PI++GG+SNAS Q AYRCA +L++LI PYLLRRMK D+ + +P KTEQVLFC +T QR YRA + S ++ ILEG+ I VLRKI NH DL + R K A + YG+V RSGK V +VL W++QGHRVLLFSQT+QMLDILE +V + G+ Y RMDG T V R +I+ FNTD N+F+FLLTT+ GGLG++LTGA+RV+L+DPDWNP TD QARERAWR+GQ R VT+YRLVT GTIEEK+Y RQI+K ++++VL DPKQ+R F + +L +LFT +ED G V + +TA F +EG +R +D+ Sbjct: 632 GGLRLPAETYDRLLEHQKTSIKWLWEIHCQRAGGVVGDEMGLGKTVQVAAFLCALERSG-LYQPTLIVCPATMLRQWRRELRAWAPKLNCGILHESAVSAASRAAARGSKKQARCNII-----RERVRDPKGVLLTTYEHLRVMRDHLLPVRWGYAILDEGHKIRNPDADVTICAKQLQTVHRLVMTGAPIQNRLAELWSLFDFCFPGKLGTLPVFQAQFAVPIQVGGYSNASQQQVTTAYRCASMLKELISPYLLRRMKADV--DIQLPTKTEQVLFCPMTQEQREAYRAYVHSRDVEEILEGRREALGGIDVLRKIVNHPDL---------------------------------------------LERRTKAAHE-----KYGEVERSGKQLVTQKVLELWKEQGHRVLLFSQTQQMLDILEAMVAKAGYPYRRMDGATPVSQRMTLIDEFNTDANVFVFLLTTKVGGLGVNLTGADRVLLYDPDWNPSTDAQARERAWRIGQTREVTVYRLVTAGTIEEKVYHRQIYKEFLTSKVLKDPKQRRFFKAKDLADLFTWEED--------NHGQGVGGDGQIETAELFAEVEGEIRAADV 1167
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_002502040.1 (predicted protein [Micromonas commoda] >ACO63298.1 predicted protein [Micromonas commoda]) HSP 1 Score: 554.3 bits (1427), Expect = 8.400e-154 Identity = 288/564 (51.06%), Postives = 369/564 (65.43%), Query Frame = 0 Query: 352 GGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKED 916 GG ++P+ +L +QRT ++WLWEL+ Q AGGI+GDEMGLGKTVQVSAFL L+RSG R L+V PAT++ QW EL AWAP LR V+LH SA + +A + + ++ + + + V LTTYE L+L+R +L W Y LDEG KIRNPDA++T+CAKQL TVHRLI++G PIQN L ELWSLFDFCFPG+LGTLP F+ + A PI+LGG+SNAS Q AYRCA +L+DLI PYLLRRMK D+ + +PKKTEQVLFC +T QR YR+ I S ++ ILEG+ I VLRKI NH DL+ R + K YG+ RSGKL V +VL W +QGHR LLFSQT+QMLDILE + R G+ Y RMDG T V R +I+ FN D+++F+FLLTT+ GGLG++LTGA+RV+L+DPDWNP TD QARERAWR+GQ + VT+YRL+T GTIEEK+Y RQI+K ++++VL DPKQ+R F + +L +LFT +ED Sbjct: 613 GGLRIPSGTYARLLEHQRTSIKWLWELHCQRAGGIIGDEMGLGKTVQVSAFLCALERSGLYR-PTLVVCPATMLRQWRRELRAWAPALRPVILHESAVSQSALADARGNKKSARLKLLRDCVADAKG-----VLLTTYEHLRLMRDHVLSVRWGYAVLDEGHKIRNPDADVTICAKQLQTVHRLIMTGAPIQNRLSELWSLFDFCFPGKLGTLPVFQAQFAVPIQLGGYSNASQQQVVTAYRCATMLKDLISPYLLRRMKADVN--INLPKKTEQVLFCPMTGEQREAYRSYIHSRDVEEILEGRREALGGIDVLRKIVNHPDLL----------------------------------------ERTTQAHSEK----------YGEAERSGKLLVTEKVLGLWREQGHRCLLFSQTQQMLDILEAAIARAGYTYRRMDGTTPVSHRMRLIDEFNGDDDVFVFLLTTKVGGLGVNLTGADRVLLYDPDWNPSTDAQARERAWRIGQTKEVTVYRLITAGTIEEKVYHRQIYKEFLTSKVLKDPKQRRFFKAKDLADLFTWEED 1118
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_018081108.1 (PREDICTED: DNA excision repair protein ERCC-6-like [Xenopus laevis] >XP_018081109.1 PREDICTED: DNA excision repair protein ERCC-6-like [Xenopus laevis] >XP_018081111.1 PREDICTED: DNA excision repair protein ERCC-6-like [Xenopus laevis] >OCT72187.1 hypothetical protein XELAEV_18035157mg [Xenopus laevis]) HSP 1 Score: 552.7 bits (1423), Expect = 2.500e-153 Identity = 286/576 (49.65%), Postives = 374/576 (64.93%), Query Frame = 0 Query: 348 LELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLR-----------GGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTL 913 +E GF +P + +KLY YQ+TGVRWLWEL+ Q AGGILGDEMGLGKT+Q+ AFL GL S R+R G +IV PAT+M QW E + W P RVV+LH + + G+ V+ + E+ NG G + +T+Y ++L+++EL + W Y+ LDEG KIRNP+A +TV KQ T HR+ILSG+P+QNNL+ELWSLFDF FPG+LGTLP F + + PI +GG+SNASP Q + AY+CA VLRD I+PYLLRRMK D+ IL +P+K EQVLFC+LT QR +Y+ I S E+ IL G F + LRKICNH DL +G G ++ G DE +G RSGK+ V+ +L W +QGHRVLLF+Q+RQM+ I+E V+ +G+ Y++MDG T + AR +I ++N D ++F+FLLTTR GGLG++LTGANRV+++DPDWNP TD QARERAWR+GQK+ VT+YRL+T GTIEEKIY RQIFK ++NRVL DPKQ+R F S +L ELFTL Sbjct: 451 VEFDEGFCVPGSLWKKLYKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYS-RIRTRGSDYRYEGLGPSIIVCPATVMHQWVKEFHTWWPQFRVVVLHETGS--------YAGKKVKLIGELGNGRG---------IIITSYSYVRLMQEELQKYHWHYIILDEGHKIRNPNAGVTVACKQFRTPHRIILSGSPMQNNLQELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMILALPEKNEQVLFCRLTDEQRQVYQTFIDSKEVYGILNGDMQVFPGLIALRKICNHPDLFSG----GPKILK------GTRDEDLE------------------------------EEEQFGFWKRSGKMIVVEALLKIWHRQGHRVLLFTQSRQMIQIMEVFVRTRGYSYVKMDGTTTIAARQPLITKYNEDPSLFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 968
BLAST of NO12G02740 vs. NCBI_GenBank
Match: OQR72026.1 (DNA excision repair protein ERCC-6-like [Tropilaelaps mercedesae]) HSP 1 Score: 550.8 bits (1418), Expect = 9.300e-153 Identity = 289/583 (49.57%), Postives = 378/583 (64.84%), Query Frame = 0 Query: 349 ELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSG------RLRGGG--LIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLV-AGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAAD-----YGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDFG 918 E+ ++P + LY YQRTGVRWLWEL++ GGI+GDEMGLGKT+Q+ +FL L+ S RG G ++ +PAT+M QW E + W P RV +LH S + + A V + + A+G +T+Y+ + + LL + W YV LDEG KIRNPD++ T+ KQ T HR+ILSG+PIQNNL+ELWSLFDF FPG+LGTLP F E A PI GG++NA+ +Q YRCA LRD + PYLLRRMK+D+ + +P K+EQVLFCKLT RQR LY+ + SPEIR IL+G+ F + LRKICNH DL GP +E I++G E + ++P + ALK + + YG RSGKL V+ +L W+KQGHR L+FSQ+RQML ILE + R+G+ YL MDG+T + +R +IERFN D++IF+FLLTTR GGLG++LTGANR++++DPDWNP TD+QARERAWR+GQ R VTIYRL+T GTIEEKIY RQIFK ++NR+L DP+Q+R F S EL ELFTL +D G Sbjct: 380 EIDEDLRMPCSLYNSLYPYQRTGVRWLWELHQNKCGGIIGDEMGLGKTIQMISFLRALRHSNARIVGDSFRGLGPVILTSPATVMHQWVKEFHKWFPKQRVGVLHNSGSFSGKKKASLV-----RDIHTASG-----------TLITSYQGIVIYLDCLLEYEWHYVILDEGHKIRNPDSQATLAVKQFKTPHRIILSGSPIQNNLRELWSLFDFVFPGKLGTLPTFMAEFAVPITQGGYANATETQVAVGYRCASTLRDTVKPYLLRRMKRDVKANINLPPKSEQVLFCKLTQRQRDLYKNYLDSPEIRQILDGRLQIFVGLVNLRKICNHPDLYDGGPYKE-------IISGNS-----NGSFKNPEESGIGKEDSLDIVPDGVESALKMSSMEEECERNYGYFKRSGKLMVVEALLKLWKKQGHRALVFSQSRQMLRILEAFIHRRGYTYLVMDGSTTIASRQPVIERFNQDKSIFVFLLTTRVGGLGVNLTGANRIIIYDPDWNPSTDMQARERAWRIGQNRDVTIYRLMTAGTIEEKIYHRQIFKQFLTNRILNDPRQRRFFKSNELHELFTLGDDIG 934
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_002595633.1 (hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae] >EEN51645.1 hypothetical protein BRAFLDRAFT_200949, partial [Branchiostoma floridae]) HSP 1 Score: 550.4 bits (1417), Expect = 1.200e-152 Identity = 293/599 (48.91%), Postives = 373/599 (62.27%), Query Frame = 0 Query: 331 QATARRE-GMMEGETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGG-----------LIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAAD--YGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKED 916 Q AR E G G +E+ GGFKLP KLY YQ+TGVRWLWEL+ Q AGGI+GDEMGLGKT+Q FL GLQ G +R G L+VAP T++ QW E + W P +RV +LH S ++ R + E+A G V +T+Y+ + L + LL + W YV LDEG KIRNPDA++T+ KQ T HR+ILSG+P+QNNL+ELWSL DF FPG+LGTLP F + + PI GG++NA+P Q Q AY+CA VLRD I+PYLLRRMK D+ L +P K+EQVLFC++T Q+ Y+ + S E + IL+G+ F + LRKICNH DLV G PR G + D YG RSGK+ V+ +L W KQGHRVLLFSQ++QMLD++E V+ Q + Y+RMDG T + +R I +FN D +IF+FLLTTR GGLG++LTGANRV++FDPDWNP TD+QARERAWR+GQ + VTIYRL+TTGTIEEKIY RQIFK ++NRVL DP+Q+R F S ++ ELFTL D Sbjct: 481 QKQARHEAGEDSGSETSDVEMDGGFKLPGETWNKLYKYQQTGVRWLWELHSQQAGGIMGDEMGLGKTIQAIVFLYGLQ-YGNVRNRGIMTKYIGLGPCLVVAPVTVLHQWVREFHTWFPRVRVAILHESGTFTTSKD--------RLIREIARDRG---------VLVTSYQEVNLRQDSLLHYDWHYVILDEGHKIRNPDAKVTLACKQFRTPHRIILSGSPMQNNLRELWSLCDFVFPGKLGTLPVFMEQFSVPITQGGYANATPVQVQTAYKCACVLRDTINPYLLRRMKNDVKMNLNLPNKSEQVLFCRITEEQKEAYKDYLGSRECQQILDGQYQVFAGLITLRKICNHPDLVTGG------------------------------------------PRIMVGTDESTLTKDQHYGYWKRSGKMIVVNTLLKMWHKQGHRVLLFSQSKQMLDLMEEFVQDQSYTYMRMDGTTTISSRQPKITKFNKDTSIFVFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTDMQARERAWRIGQSKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVLKDPRQRRFFKSNDMYELFTLTCD 1019
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_004021608.1 (PREDICTED: DNA excision repair protein ERCC-6 isoform X1 [Ovis aries] >XP_011960929.1 PREDICTED: DNA excision repair protein ERCC-6 isoform X1 [Ovis aries]) HSP 1 Score: 550.1 bits (1416), Expect = 1.600e-152 Identity = 293/590 (49.66%), Postives = 375/590 (63.56%), Query Frame = 0 Query: 334 ARREGMMEGETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSG-RLRGGG---------LIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAAD-YGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTL 913 +RRE +G EL GFK+P + RKL+ YQ+TGVRWLWEL+ Q AGGILGDEMGLGKT+Q+ AFL GL S R RG +IV P T+M QW E + W P RV +LH + + +K R VR ++A+ G + +T+Y ++L++ ++ H W YV LDEG KIRNP+A IT+ KQ T HR+ILSG+P+QNNL+ELWSLFDF FPG+LGTLP F + + PI +GG+SNASP Q + AY+CA VLRD I+PYLLRRMK D+ L +P K EQVLFC+LT Q +Y+ I S E+ IL G+ F + LRKICNH DL +G P++ KGA D +G RSGK+ V+ +L W KQG RVLLFSQ+RQMLDILE ++ Q + YL+MDG T + +R +I R+N D ++F+FLLTTR GGLG++LTGANRV+++DPDWNP TD QARERAWR+GQK+ VT+YRL+T GTIEEKIY RQIFK ++NRVL DPKQ+R F S +L ELFTL Sbjct: 470 SRRE---DGSEESDAELDEGFKMPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSF-----THKKERLVR---DIAHCHG---------ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGEMQIFSGLVALRKICNHPDLFSGG------------------------------------------PKSLKGAPDEELGEDEFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLIARYNEDTSVFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 997
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_011989351.1 (PREDICTED: DNA excision repair protein ERCC-6 isoform X1 [Ovis aries musimon] >XP_011989350.2 PREDICTED: DNA excision repair protein ERCC-6 isoform X1 [Ovis aries musimon]) HSP 1 Score: 549.7 bits (1415), Expect = 2.100e-152 Identity = 292/590 (49.49%), Postives = 375/590 (63.56%), Query Frame = 0 Query: 334 ARREGMMEGETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSG-RLRGGG---------LIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAAD-YGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTL 913 +RRE +G EL GFK+P + RKL+ YQ+TGVRWLWEL+ Q AGGILGDEMGLGKT+Q+ AFL GL S R RG +IV P T+M QW E + W P RV +LH + + +K R VR ++A+ G + +T+Y ++L++ ++ H W YV LDEG KIRNP+A IT+ KQ T HR+ILSG+P+QNNL+ELWSLFDF FPG+LGTLP F + + PI +GG+SNASP Q + AY+CA VLRD I+PYLLRRMK D+ L +P K EQVLFC+LT Q +Y+ + S E+ IL G+ F + LRKICNH DL +G P++ KGA D +G RSGK+ V+ +L W KQG RVLLFSQ+RQMLDILE ++ Q + YL+MDG T + +R +I R+N D ++F+FLLTTR GGLG++LTGANRV+++DPDWNP TD QARERAWR+GQK+ VT+YRL+T GTIEEKIY RQIFK ++NRVL DPKQ+R F S +L ELFTL Sbjct: 470 SRRE---DGSEESDAELDEGFKMPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSF-----THKKERLVR---DIAHCHG---------ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLVALRKICNHPDLFSGG------------------------------------------PKSLKGAPDEELGEDEFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLIARYNEDTSVFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 997
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_011989352.2 (PREDICTED: DNA excision repair protein ERCC-6 isoform X2 [Ovis aries musimon]) HSP 1 Score: 549.7 bits (1415), Expect = 2.100e-152 Identity = 292/590 (49.49%), Postives = 375/590 (63.56%), Query Frame = 0 Query: 334 ARREGMMEGETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSG-RLRGGG---------LIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAAD-YGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTL 913 +RRE +G EL GFK+P + RKL+ YQ+TGVRWLWEL+ Q AGGILGDEMGLGKT+Q+ AFL GL S R RG +IV P T+M QW E + W P RV +LH + + +K R VR ++A+ G + +T+Y ++L++ ++ H W YV LDEG KIRNP+A IT+ KQ T HR+ILSG+P+QNNL+ELWSLFDF FPG+LGTLP F + + PI +GG+SNASP Q + AY+CA VLRD I+PYLLRRMK D+ L +P K EQVLFC+LT Q +Y+ + S E+ IL G+ F + LRKICNH DL +G P++ KGA D +G RSGK+ V+ +L W KQG RVLLFSQ+RQMLDILE ++ Q + YL+MDG T + +R +I R+N D ++F+FLLTTR GGLG++LTGANRV+++DPDWNP TD QARERAWR+GQK+ VT+YRL+T GTIEEKIY RQIFK ++NRVL DPKQ+R F S +L ELFTL Sbjct: 470 SRRE---DGSEESDAELDEGFKMPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSF-----THKKERLVR---DIAHCHG---------ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSGLVALRKICNHPDLFSGG------------------------------------------PKSLKGAPDEELGEDEFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLIARYNEDTSVFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTL 997
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_020192030.1 (DNA excision repair protein CSB [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 548.9 bits (1413), Expect = 3.500e-152 Identity = 314/791 (39.70%), Postives = 439/791 (55.50%), Query Frame = 0 Query: 321 REPIPGSRAAQATARREGMME------GETAG-------------------PLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFA------------------------AQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDFGXXXXXXXDGGRVDEEAPNDTAMEF---MEGV-VRRSDLKKRGERKWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKILRAVFEGRGLSSILSHDVVESGKRNTEMWVQMQEHAKRIADRA 1059 + P+PG + +A +++E +++ G+ A P+ L GG ++P + +L+ YQ+ GV+WLWEL+ Q AGGI+GDEMGLGKTVQV +FLG L SG + +++ P TL+ QW E W P +V +LH SA + + +PA K + +V+ +G + LTTYE L+++R++LL W Y LDEG +IRNP+AE+T+ KQL TVHR+I++G PIQN L ELWSLFDF FPG+LG LP FETE + PI +GG++NA+P Q AYRCA+VLRDLI PYLLRRMK D+ +PKKTEQVLFC LT QRA YRA ++S E+ I +G + I VLRKICNH DL+ + A P DYG++ RSGK++V+ +VL W+ QGHRVLLF+QT+QMLDILE + + + Y RMDG T R A+I+ FN + IFIF+LTT+ GGLG +LTGANRV++FDPDWNP TD+QARERAWR+GQKR VT+YRL+T GTIEEK+Y RQI+K ++N+VL +P+Q+R F + ++K+LFTL++D D+ +T+ F E V + D ++RGER S IL+++F+G+G+ S ++HD + S N + ++++ A ++A RA Sbjct: 340 KRPLPGKKWMKANSKKETLLDVADEDVGDAAASASVSENEDEVIEGSDGLPPVILEGGLRIPGSVYTQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGALHDSGMYK-PSIVICPVTLLQQWRREASKWYPKFKVEILHDSANSSSKKGKRYSDSESDVSWDSDQEEVTRMKPAQKWDDLISRVVNSGSG-----------LLLTTYEQLRIIREKLLDVEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFETEFSVPITVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNA--QLPKKTEQVLFCSLTQEQRATYRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLL----------------------------------------------EREQAAQNP----DYGNIERSGKMKVVEQVLKVWKDQGHRVLLFAQTQQMLDILENFLTARDYQYRRMDGLTPPKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQRRFFKARDMKDLFTLQDD--------------DKNGSTETSNIFGQLSEDVNIGAPDGEERGER-------------------------PSALPTSAEAEPSVDGDGKSDLRSDQADEESNILKSLFDGQGVHSAINHDAIMSA--NDDQKLRLEAEASQVAQRA 1025
BLAST of NO12G02740 vs. NCBI_GenBank
Match: OAQ31381.1 (hypothetical protein K457DRAFT_148691 [Mortierella elongata AG-77]) HSP 1 Score: 548.1 bits (1411), Expect = 6.100e-152 Identity = 285/597 (47.74%), Postives = 372/597 (62.31%), Query Frame = 0 Query: 350 LPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKV--------------GRFVRKVLEMANGGGQ-----------------GRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKED 916 L GGF++P I L+ YQ+T +WLWEL+ QGAGGI+GDEMGLGKT+Q+ AF+ GL SG+L +IV PATL+ QW E + W P +RV +LH S + G R+ + GGG+ R V +TTY L++ LL +W+Y+ LDEG IRNPDA+IT+ KQ T HR+ILSGTPIQNNL ELWSLFDF FPGRLGTLP F+++ A PI LGG++NAS Q Q AY+CA+VLRDLI+PYLLRRMK D+ + MPKK+EQVLFCKLT QR Y + S E+ I++GK I V+RKICNH D++ G + D DYGD +SGK+ V+ +L W+K HRVLLFSQTR MLDILE+ +KR+G+ Y RMDG T + R +++ FN ++I++FLLTT+ GGLG++LTGA+RV++FDPDWNP TD+QARERAWRLGQ R+VTIYRL+T+GT+EEKIY RQIFK ++N++L DPKQ+R F S ++ +LFTL+++ Sbjct: 394 LEGGFRIPGDIFSNLFDYQKTCTQWLWELHCQGAGGIIGDEMGLGKTIQMIAFIAGLHYSGKLDAPVIIVCPATLLKQWVKEFHRWWPPIRVAILHSSGSGMNXXXXXXXXXXXXXXXXXXXXNGTGKRQKTKKRFGGGKRRGKAVSDERTVADTLVERISAKGHVIVTTYAGLRIHSSRLLRQSWSYIVLDEGHNIRNPDADITLRCKQFKTPHRIILSGTPIQNNLNELWSLFDFVFPGRLGTLPVFQSQFAIPINLGGYANASNIQVQTAYKCAVVLRDLINPYLLRRMKVDVAS--DMPKKSEQVLFCKLTPPQRKAYEQFLKSDELNSIMDGKRHALFGIDVVRKICNHPDIL-GREQHQYD-------------------------------------------------EDYGDYTKSGKMIVVKTLLEMWQKGKHRVLLFSQTRTMLDILEKFIKREGYSYRRMDGTTPIQHRMGLVDEFNARDDIYVFLLTTKVGGLGVNLTGADRVIIFDPDWNPSTDVQARERAWRLGQTRSVTIYRLMTSGTVEEKIYHRQIFKQFLTNKILKDPKQRRFFKSHDMADLFTLEDE 938 The following BLAST results are available for this feature:
BLAST of NO12G02740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02740 ID=NO12G02740|Name=NO12G02740|organism=Nannochloropsis oceanica|type=gene|length=3410bpback to top protein sequence of NO12G02740.1 >NO12G02740.1-protein ID=NO12G02740.1-protein|Name=NO12G02740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1088bpback to top Synonyms
Publications
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