NO12G02740, NO12G02740 (gene) Nannochloropsis oceanica

Overview
NameNO12G02740
Unique NameNO12G02740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3410
Alignment locationchr12:766732..770141 -

Link to JBrowse

Properties
Property NameValue
DescriptionDna excision repair protein ercc-6
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:766732..770141 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000330SNF2_N
IPR001650Helicase_C
IPR006642Znf_Rad18_put
IPR014001Helicase_ATP-bd
Homology
BLAST of NO12G02740 vs. NCBI_GenBank
Match: EWM25756.1 (dna excision repair protein ercc-6 [Nannochloropsis gaditana])

HSP 1 Score: 1054.3 bits (2725), Expect = 2.600e-304
Identity = 619/809 (76.51%), Postives = 684/809 (84.55%), Query Frame = 0
Query:  251 GKQKARGFLLVDDFADDDYEHRLDEYEAALRAMGG-SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAREPIPGSRAAQATARREGMMEGETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDFGXXXXXXXDGGRVDEEAPNDTAMEFMEGVVRRSDLKKRGERKWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKILRAVFEGRGLSSILSHDVVESGKRNTEMWVQMQEHAKRIADRA 1059
            G ++ +G L+VDDF +++Y  RL+EY   L A+G             XXXXXXXX              +   P PGSR AQATARREG+ E E AGPL LPGGF LPA INRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGL RSGRL GG L+VAPATLMSQW SEL+AWAP LRVV+LHRSAAAFAAQP  KV RFVR+VL    G G+GR     +VCL+TYESLKLLRKELL H WAYVALDEGQKIRNPDAE+T+CAKQLPT+HRLILSGTPIQNNL+ELWSLFDFCFPGRLGTLPAFETELATPIRLGG+SNA+P+QAQCAYRCALVLRDL+HPYLLRRMKKDIMTILP+PKKTEQVLFCKLT RQ+ALYRA ISSPEIRLI+EGKASHF+AITVLRKICNHADLVAGP+EEG +LM+R+VAGGGWADE XXXXXXXXXXXXXX        R    AL  VT    G V RSGK+QVLA VLPRW +QGHRVLLFSQTRQMLD+LER V+ +GW YLRMDG+TNVGARPA+IERFN D  +F+FLLTTRTGGLGISLTGANRV+LFDPDWNPQTDIQARERAWRLGQ+R VTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVD KQKRLFSSGELKELFTL+EDF             DEEAPNDTAMEFM+GVV+++D++    R+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +KILRAVF+GRGL+S+LSHDVVE+G+RNTE+W++MQ  A+++ADRA
Sbjct:    3 GSRRRQGLLMVDDFLEENYRRRLEEYRVGLGALGSPGEATALDGDEDXXXXXXXXAAPASLSGGQAEGEVTSSPRPGSRGAQATARREGLGENEVAGPLALPGGFVLPASINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLHRSGRLEGGALVVAPATLMSQWVSELFAWAPRLRVVVLHRSAAAFAAQPGPKVSRFVRRVL----GMGRGR---AGLVCLSTYESLKLLRKELLNHPWAYVALDEGQKIRNPDAEVTICAKQLPTIHRLILSGTPIQNNLRELWSLFDFCFPGRLGTLPAFETELATPIRLGGYSNATPTQAQCAYRCALVLRDLVHPYLLRRMKKDIMTILPLPKKTEQVLFCKLTPRQQALYRAVISSPEIRLIVEGKASHFRAITVLRKICNHADLVAGPDEEGTELMARLVAGGGWADEWXXXXXXXXXXXXXXXXXXXXXXRE---ALASVTEGTMGAVCRSGKMQVLAAVLPRWARQGHRVLLFSQTRQMLDLLERFVRSRGWEYLRMDGSTNVGARPALIERFNQDTRVFVFLLTTRTGGLGISLTGANRVILFDPDWNPQTDIQARERAWRLGQRRPVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDAKQKRLFSSGELKELFTLREDFAG-----------DEEAPNDTAMEFMDGVVKKADVE---GRRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDNKILRAVFKGRGLASVLSHDVVEAGRRNTELWMEMQARARQVADRA 787          
BLAST of NO12G02740 vs. NCBI_GenBank
Match: CBJ29096.1 (SNF2 family protein [Ectocarpus siliculosus])

HSP 1 Score: 632.9 bits (1631), Expect = 1.900e-177
Identity = 404/971 (41.61%), Postives = 520/971 (53.55%), Query Frame = 0
Query:  107 EGEPTVSCPVCGRGVPVQDKTQPDAELSQHLDRCMRTSRRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFVDXXXXXXXXXXXXXXXXXXXXXXLKTEAPLSLRLPTG-----QRKAVTAAAVKDGKGKKKEK--QMIGGKQKARGFLLVDDFADDDYEHRLDEYEAALRAMGGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAREPIPGSRAAQATARREGMMEGETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQP--AYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKED-----FGXXXXXXXDGGRV-----DEEAPNDTAMEFMEGVVRRSDLKKRGERKWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKILRAVFEGRGLSSILSHDVVESGKRNTEMWVQMQEHAKRIADRA 1059
            E    V CPVC + V V D   PD  LS+H+DRC R++RRR+                          XXXXXXXX      V+                          + L   L TG     +RKA   A V   +  + +   +++GG Q      LVDDF D+D+E R  +      A G                                                        +  +A   EL  G  L   I ++L+ +QRTGVRW+W+L+RQGAGGI+GDEMGLGKTVQVSAFLG L  S  +R   LI+ PAT++S W +EL+ WAP LRVV+LHR   AF A    + K+   +R++L               VV + +YE +K L+  LL   W Y  LDEGQ+IRNPDAE+T+  KQ+ TVHRLIL+GTPIQNNL+ELWSLFDF FPGRLGTLPAFE E A PIR+GG++NASP QA+ AYRCALVLRDLI PYLLRR KKD+  I+ +P KTEQVLFC+LT+ QR LY   + S E++ +L      F+AI +LRK+CNH DLV    +  V  ++     GG +D                        +      +   + +  +V RSGKL VL ++LP W KQGHRVLLFSQTRQML I+ER V    W Y R+DG+T VG R  +I+RFN DE++FI LLTTRTGG+G++LTGA+RV+LFDPDWNP TD+QARER+WR+GQ+R VT+YRLVT GTIEEKIY RQIFKTA++NRVL DPKQ+R+FS+ EL +LFTL +D     F          GRV     +++  N    E    V R++  KK   R+                                                      + +L+A++EG  LSS+  HD+ E   R T    +M+E AKR A RA
Sbjct:  229 EKNAAVQCPVCAQMVTVDDPANPDICLSRHMDRCTRSARRRSCRQAGEARGLEKGSDASTRPRASSRGXXXXXXXXRGQDSDVNGGHLAAK----------------SRSSALVDHLGTGVTRAKRRKASGQAVVHGSESSETDAALKVLGGGQS-----LVDDFDDEDFETRKAQVVDLSVANGVGE-----------------------------------------------------DSLSANSAELGDGLILDDGIAQRLFQFQRTGVRWMWQLHRQGAGGIVGDEMGLGKTVQVSAFLGALHGSSVMR-RALILCPATVLSHWMAELHIWAPQLRVVVLHRCVQAFNAVSGNSGKLRALIRRIL-----------GWPEVVVVASYEGMKSLKAFLLPCNWDYCVLDEGQRIRNPDAEVTLICKQIRTVHRLILTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFANPIRVGGYANASPMQARLAYRCALVLRDLIQPYLLRRQKKDLEDIIHLPAKTEQVLFCRLTSYQRRLYSEFLESTEVKSVLSRTMRAFRAIGILRKLCNHPDLVCRFGDSVVTRLASHQIWGGDSD---------------------ASEKEEDDTAEESKSDNDHEVQRSGKLLVLQQILPLWHKQGHRVLLFSQTRQMLSIIERFVVNNEWSYGRLDGSTPVGNRQTLIDRFNNDESMFIMLLTTRTGGVGVNLTGADRVILFDPDWNPSTDMQARERSWRVGQRRQVTVYRLVTAGTIEEKIYHRQIFKTALTNRVLQDPKQRRMFSADELGDLFTLGDDGASDGFTDTIDLFQGEGRVRFPQGEQQGSNSRRSEGASDVRRKNGRKKSPSRR---GNRVARRESASPSSSPLLGTATVTIAPASGDEERKSSVDGDQDSEKSKGDDNAVLQALYEGAPLSSVFHHDLAEGSGRMTMEQKRMEEAAKRAAQRA 1089          
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_002286143.1 (rad54-like protein, partial [Thalassiosira pseudonana CCMP1335] >EED95784.1 rad54-like protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 596.3 bits (1536), Expect = 1.900e-166
Identity = 305/573 (53.23%), Postives = 389/573 (67.89%), Query Frame = 0
Query:  346 GPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGD---VARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKED 916
            G +   GG ++PA IN +L+ YQR G+RW+WELY  GAGG +GDEMGLGKTVQVS+FLG +  + R     L+V PAT++S W SEL  WAP LR +++HRS          +   +  +  +   G G        +V +TTYES++          W+YV LDEGQKIRNPDAE+T+  K+L T +RL++SGTPIQN+L+ELWSLFDF FPGRLGTLPAFE E A PI+ GG+SNASP Q Q AYRCA+VLRDLI+PYLLRR KKDI  +  MP KTEQVLFC+L+++QR+LY   + S E+  ++ G     KA+TVLRKICNH DLV GP+   +D +    +     D                                      YGD   V  SGKLQVLA++LP W KQGHR +LF Q R+ L+I+E+  ++Q W + R+DGNTNV +R  ++++FN DE+ F  L+TTRTGG+G+++TGANRVV+FDPDWNPQTD QARERAWR GQK+ VT+YRL+T GTIEEKIYQRQIFKTAI+N+VL DPKQ+RLFS  +LK+LFTLK D
Sbjct:   15 GAVVYEGGLEVPAWINDRLFPYQRIGLRWMWELYCVGAGGCVGDEMGLGKTVQVSSFLGAM-AANRFIDSVLVVCPATMLSHWLSELAVWAPGLRRIMVHRSG---------ETDDYEEQGADAFCGTG--------IVLVTTYESIRRSPDVYASFDWSYVVLDEGQKIRNPDAEVTLAVKRLRTPNRLLMSGTPIQNDLRELWSLFDFVFPGRLGTLPAFEAEFAEPIKRGGYSNASPMQVQLAYRCAIVLRDLINPYLLRRQKKDIKEVHRMPGKTEQVLFCRLSSKQRSLYEDYLRSDEVMGVMRGSVQLLKAVTVLRKICNHPDLVVGPDGRTLDSVQEESSSDNDDD-----------------------------------GCFYGDERFVEVSGKLQVLAKILPLWHKQGHRFILFCQWRKTLNIIEQFTRKQNWKFARLDGNTNVASRQKLVDKFNNDESYFCMLMTTRTGGVGLNVTGANRVVIFDPDWNPQTDAQARERAWRFGQKKDVTVYRLITAGTIEEKIYQRQIFKTAITNQVLQDPKQRRLFSQKDLKDLFTLKAD 534          
BLAST of NO12G02740 vs. NCBI_GenBank
Match: ORY79839.1 (SNF2 family N-terminal domain-domain-containing protein [Protomyces lactucaedebilis])

HSP 1 Score: 569.7 bits (1467), Expect = 1.900e-158
Identity = 307/591 (51.95%), Postives = 383/591 (64.81%), Query Frame = 0
Query:  327 SRAAQATARREGMME----GETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILER-LVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTL 913
            +RAAQ     E M E      T   L   GGF++P  I+  L+ YQ+T V+WLWEL+ QG GGI+GDEMGLGKTVQV +FL GL  SG+L G  LIVAPAT+M  W  E + W P LRV +LH S  A  A      G  VRKV++     G         V +TTY  L   R+ L   AW+Y  LDEG KIRNPDAE+++ AKQL TVHRLILSGTPIQNNL ELWSLFDFCFPGRLGTLP F  + A PI +GG++NAS  Q Q A++CA VLRDLI PYLLRRMK D+     +PKK+EQVLFCKLT +QR  Y   ++S E+  IL GK      + VLRKICNH DLV     + + L  R                                             +DYGD ++SGK+QV+  +L  W+++GHR LLF+Q RQMLDILER +V  +G+ Y RMDG T +  R A+++ FNT+ +I +FLLTTR GGLG++LTGA+RVV++DPDWNP TD+QARERAWRLGQK+ VTI+RL+T+GTIEEKIY RQIFK  ++N++L DPKQ+R F   +L +LF+L
Sbjct:  261 ARAAQGAGVDEDMDEVLQPHPTEPSLAFNGGFQIPGDIHPSLFDYQKTCVQWLWELHAQGCGGIIGDEMGLGKTVQVISFLAGLSHSGKLDGPVLIVAPATVMQMWVKEFHKWWPPLRVCILHSSGEATRA------GSNVRKVVQNVVNEGH--------VLVTTYAGLTSYREMLGPVAWSYAILDEGHKIRNPDAEVSLAAKQLRTVHRLILSGTPIQNNLTELWSLFDFCFPGRLGTLPIFHAQFALPINIGGYANASNVQVQTAFKCACVLRDLISPYLLRRMKADVAA--DLPKKSEQVLFCKLTDKQRTAYERFLASGEMEAILNGKRQVLFGVDVLRKICNHPDLV-----DRLQLQKR---------------------------------------------SDYGDSSKSGKMQVVKALLELWKREGHRTLLFAQGRQMLDILERYVVSLEGFNYRRMDGTTPIVQRQALVDEFNTNADIHVFLLTTRVGGLGVNLTGADRVVIYDPDWNPSTDVQARERAWRLGQKKDVTIFRLMTSGTIEEKIYHRQIFKQFLTNKILRDPKQRRFFKMNDLHDLFSL 785          
BLAST of NO12G02740 vs. NCBI_GenBank
Match: XP_002176801.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51264.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 565.8 bits (1457), Expect = 2.800e-157
Identity = 287/543 (52.85%), Postives = 374/543 (68.88%), Query Frame = 0
Query:  375 LWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDFG 918
            +W+L+++ AGGI+GDEMGLGKTVQ S+F+G L  S +L+   LI++PAT++  W +EL  WAP LR +L+H+S       P++                G G       V LTTYE+++        HAW+YV LDE QKIRNPDA+IT+  K++ T HRL +SGTPIQN+LKELWSLFDF FPGRLGTLPAFE E A  I+ GG+SNASP Q Q AYRCA+VLRDLI+PYLLRR KKD++ +  MP KTE VLFC+L+ RQRALY A + S E+  +++G    F A+T+LRKICNH DL   P+E   +   R     G+ ++               E   +                    V RSGKL+VL+++LP W+KQGHRVL+F Q R+MLDI+ERL+  + W + R+DGNTNV +R  ++++FN+DE+ F  L TTRTGG+G++LTGANR++L+DPDWNPQTD QARERAWR GQ+R VT+YRL+T GTIEEKIYQRQIFKTA+SN+VL DP+Q+RLFS  +L++LFTLK D G
Sbjct:    1 MWKLHQEEAGGIIGDEMGLGKTVQASSFIGVLAASRKLK-SVLIISPATMLQHWLNELAVWAPGLRRILIHQSGEDLETLPSHSF-------------CGTG------YVVLTTYENVRRNTDIYTEHAWSYVVLDEAQKIRNPDADITLACKRIRTPHRLAMSGTPIQNDLKELWSLFDFVFPGRLGTLPAFEQEFADTIKRGGYSNASPMQVQLAYRCAMVLRDLINPYLLRRQKKDVIEVSRMPGKTEHVLFCRLSQRQRALYEAFLLSDEVTKVVKGSKQLFAAVTMLRKICNHPDLACDPDEASFESFVR----NGYVNQGDLDEDLSDLDSDIGEEKSL--------------------VERSGKLEVLSKILPLWKKQGHRVLIFCQWRKMLDIIERLIMLKEWKFGRLDGNTNVASRQRLVDQFNSDESYFGMLCTTRTGGVGLNLTGANRIILYDPDWNPQTDAQARERAWRFGQEREVTVYRLITAGTIEEKIYQRQIFKTALSNKVLQDPRQRRLFSQKDLRDLFTLKADAG 499          
BLAST of NO12G02740 vs. NCBI_GenBank
Match: GAX09892.1 (DNA excision repair protein ERCC-6 [Fistulifera solaris])

HSP 1 Score: 565.5 bits (1456), Expect = 3.700e-157
Identity = 292/587 (49.74%), Postives = 384/587 (65.42%), Query Frame = 0
Query:  346 GPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRS------AAAFAAQPAYKVGRFVRKV----LEMANGGGQGRXXXXXVVC------LTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASH-FKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKED 916
            G  +L GG  +PA IN +L+ YQR  + W+WEL++Q  GGI+GDEMGLGKTVQVS+FLG +  S +LR   L+VAPAT++  W +EL  WAP +R +++H S      +   ++    K+ +++++V    +  A              C      +TTYE+++        H W+YV LDE QKIRNPDAEIT+  K++ T HRL +SGTPIQN+L+ELWSLFDF +PGRLGTLPAFETE   PI+ GG+SNASP Q Q AYRCAL LRDLI+PYLLRR KK++  +  MP KTE VLFC++T RQR +Y A I S  +  +L G+++    AIT+LRKICNH DLV  P+E                 E               E   M                      RSGKL+VL+++LP W KQGHRVL+F Q + MLDI++R +  +GW + R+DGNTNVGAR  +++ FN+DE+ F  L TTRTGG+G++LTGANR++L+DPD+NP TD QARERAWR GQ++ VTIYRL+  GTIEEKIYQRQIFKTA+SN++L DPKQ+RLFS  E+ +LF+L  D
Sbjct:  372 GERKLQGGLYIPAWINNRLFGYQRESLEWMWELHQQQVGGIIGDEMGLGKTVQVSSFLGVMAASRKLR-SILVVAPATMLQHWLNELSTWAPGIRRIVIHSSGELDGESRTMSSAFLRKMDQWLKRVRVDRVNEAIDAEDRENMEPHCFCGTGYAVVTTYENVRRNADIYANHNWSYVVLDEAQKIRNPDAEITLACKKIRTPHRLAMSGTPIQNDLRELWSLFDFVYPGRLGTLPAFETEFGDPIKRGGYSNASPMQVQLAYRCALTLRDLINPYLLRRQKKEVKEVSRMPSKTEHVLFCRITQRQRDMYEAYIRSDNVTGLLRGRSNRLLAAITMLRKICNHPDLVCDPDESSFQAFLNNGNSNKPGRESDSEDALTDFEDVKDEETLM---------------------ERSGKLEVLSKILPLWNKQGHRVLIFCQWKMMLDIIQRFMLLKGWKFGRLDGNTNVGARQRLVDEFNSDESYFALLCTTRTGGVGLNLTGANRIILYDPDFNPSTDAQARERAWRFGQEKEVTIYRLICAGTIEEKIYQRQIFKTALSNKILQDPKQRRLFSQREIHDLFSLSAD 936          
BLAST of NO12G02740 vs. NCBI_GenBank
Match: GAX14417.1 (DNA excision repair protein ERCC-6 [Fistulifera solaris])

HSP 1 Score: 562.8 bits (1449), Expect = 2.400e-156
Identity = 291/588 (49.49%), Postives = 386/588 (65.65%), Query Frame = 0
Query:  346 GPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKV-----------------LEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASH-FKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKED 916
            G  +L GG  +PA IN +L+ YQR  + W+WEL++Q  GGI+GDEMGLGKTVQVS+FLG +  S +LR   L+V+PAT++  W +EL  WAP +R +++H S            G F+RK+                  E  +              +TTYE+++        H W+YV LDE QKIRNPDAEIT+  K++ T HRL +SGTPIQN+L+ELWSLFDF +PGRLGTLPAFETE   PI+ GG+SNASP Q Q AYRCAL LRDLI+PYLLRR KK++  +  MP KTE VLFC++T RQR +Y A I S  +  +L G+++    AIT+LRKICNH DLV  P+E       ++    G +++               +          K     VT  +     RSGKL+VL+++LP W KQGHRVL+F Q + ML+I++R +  +GW + R+DGNTN+GAR  +++ FN+DE+ F  L TTRTGG+G++LTGANR++L+DPD+NP TD QARERAWR GQ++ VTIYRL+  GTIEEKIYQRQIFKTA+SN++L DPKQ+RLFS  E+ +LF+L  D
Sbjct:  370 GEQKLQGGLYIPAWINNRLFGYQRESLEWMWELHQQQVGGIIGDEMGLGKTVQVSSFLGVMAASRKLR-SILVVSPATMLQHWLNELATWAPGIRRIVIHSSGELDGESRNISSG-FLRKLDQWLKRVRVDRVNEAIDAEDRDSMEPHSFCGTGYAIVTTYENVRRNADIYANHNWSYVVLDEAQKIRNPDAEITLACKKIRTPHRLAMSGTPIQNDLRELWSLFDFVYPGRLGTLPAFETEFGDPIKRGGYSNASPMQVQLAYRCALTLRDLINPYLLRRQKKEVKEVSRMPSKTEHVLFCRITQRQREMYEAYIRSDNVTGLLRGRSNRLLAAITMLRKICNHPDLVCDPDES-----FQVFLNNGNSNKPGRESDSEDALSDFDD---------VKDVKDEVTLME-----RSGKLEVLSKILPLWNKQGHRVLIFCQWKMMLNIIQRFMLLKGWKFGRLDGNTNIGARQRLVDEFNSDESYFALLCTTRTGGVGLNLTGANRIILYDPDFNPSTDAQARERAWRFGQEKEVTIYRLICAGTIEEKIYQRQIFKTALSNKILQDPKQRRLFSQREIHDLFSLSAD 936          
BLAST of NO12G02740 vs. NCBI_GenBank
Match: PRW57121.1 (CHROMATIN REMODELING 8 [Chlorella sorokiniana])

HSP 1 Score: 561.6 bits (1446), Expect = 5.300e-156
Identity = 286/565 (50.62%), Postives = 377/565 (66.73%), Query Frame = 0
Query:  352 GGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDF 917
            GG++LPA +  +L+ YQRT V+W+WEL+ Q AGGI+GDEMGLGKT+QV +FL GL  SG  R   LIV PAT++ QW  EL AW P  RV LLH SA + +A  A +  RF R + E+A             + LTTYE+++L R EL+G  W YV LDEG KIRNPDAE+T+ AKQ+ TVHR+++SG+PIQN L ELWSLFDF FPG+LGTLP F  + A PI++GG++NA+P Q   AY+CA++LRDLI PYLLRR K D+     +P+KTEQVLFC LT  QR LY+  +SS E++ I  G  +    I +LRKICNH DL+     E                                                   A DYG+  RSGK+QVLA+VL  W +QGH+ L+F+QT+QMLDI+E+  + QG+ Y RMDG+T+V  R  +I+ FN +  +F FLLTTR GGLG++LTGANRV+L+DPDWNP TD+QARERAWR+GQ R V IYRL+T+GTIEEK+Y RQ++K  ++++VL DP+Q+R F + +L +LFTL +++
Sbjct:  514 GGYRLPADVWNRLFDYQRTAVKWMWELHTQRAGGIIGDEMGLGKTIQVISFLAGLHHSGLFR-PSLIVCPATVLRQWLRELRAWWPLFRVALLHDSARSGSAAGA-RPSRF-RLIQEIARS--------DCGILLTTYETMRLQRAELVGVDWGYVVLDEGHKIRNPDAEVTLAAKQMQTVHRIVMSGSPIQNRLTELWSLFDFVFPGKLGTLPVFTAQFALPIQIGGYANANPLQVSTAYKCAVILRDLIAPYLLRRRKVDVRA--QLPQKTEQVLFCTLTGEQRTLYKGYLSSKELQEIFAGSRTALAGIDILRKICNHPDLLERAKWE--------------------------------------------------AAQDYGNPERSGKMQVLAKVLRHWREQGHKALVFTQTQQMLDIVEKHAQAQGYTYHRMDGSTSVATRARLIDDFNNNPEVFCFLLTTRVGGLGVNLTGANRVLLYDPDWNPSTDVQARERAWRIGQTREVVIYRLITSGTIEEKVYHRQVYKHFLTDKVLRDPRQRRFFKAKDLTDLFTLGDEY 1015          
BLAST of NO12G02740 vs. NCBI_GenBank
Match: PSC71103.1 (CHROMATIN REMODELING 8 [Micractinium conductrix])

HSP 1 Score: 561.6 bits (1446), Expect = 5.300e-156
Identity = 285/568 (50.18%), Postives = 376/568 (66.20%), Query Frame = 0
Query:  352 GGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLH---RSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDF 917
            GGF+LP+ +  +L+ YQRT V+W+WEL+ Q AGGI+GDEMGLGKT+Q+ AFL GL  SG  R   LIV PAT++ QW  EL AW P  RV LLH   RS A  A +P+    R ++++ +  +G           + LTTYE+++L R ELL   W YV LDEG KIRNPDAE+T+ AKQ+ TVHR+I+SG+PIQN L ELWSLFDF FPG+LGTLP F  + A PI++GG++NASP Q   AY+CA++LRDLI PYLLRR K D+ T   +P KTEQVLFC LT  QR+LYR  ++S E++ I  G  +    I +LRK+CNH DL+     E  +                                                  DYG+  RSGK+QVLA VL  W   GH+ L+F+QT+QMLDILE+    QG+ Y RMDG+T+V  R  +++ FNT+ ++F FLLTTR GGLG++LTGANRV+L+DPDWNP TD+QARERAWR+GQ R V IYRL+T+GTIEEK+Y RQ++K  ++++VL DP+Q+R F + +L +LFTL +++
Sbjct:  485 GGFRLPSDVWERLFDYQRTAVKWMWELHTQRAGGIIGDEMGLGKTIQIIAFLAGLHHSGLFR-PTLIVCPATVLRQWLRELRAWWPLFRVALLHDSARSGAGAARRPSRT--RIIKEIGQSGSG-----------ILLTTYETMRLQRGELLDVEWGYVVLDEGHKIRNPDAEVTLVAKQVQTVHRIIMSGSPIQNRLTELWSLFDFVFPGKLGTLPIFTAQFALPIQIGGYANASPLQVSTAYKCAVILRDLIAPYLLRRRKADVRT--QLPAKTEQVLFCTLTPEQRSLYRGYLASKELQEIFAGNRAALAGIDILRKVCNHPDLLERAKWEATE--------------------------------------------------DYGNAERSGKMQVLARVLQHWHAAGHKALVFTQTQQMLDILEKHTAAQGYTYHRMDGSTSVAQRARLMDDFNTNPDVFCFLLTTRVGGLGVNLTGANRVLLYDPDWNPSTDVQARERAWRIGQTREVVIYRLITSGTIEEKVYHRQVYKHFLTDKVLRDPRQRRFFKAKDLTDLFTLGDEY 986          
BLAST of NO12G02740 vs. NCBI_GenBank
Match: PRP77131.1 (hypothetical protein PROFUN_14545 [Planoprotostelium fungivorum])

HSP 1 Score: 555.4 bits (1430), Expect = 3.800e-154
Identity = 288/595 (48.40%), Postives = 384/595 (64.54%), Query Frame = 0
Query:  322 EPIPGSRAAQATARREGMMEGETAGPLELPGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVSAFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAAFAAQPAYKVGRFVRKVLEMANGGGQGRXXXXXVVCLTTYESLKLLRKELLGHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELWSLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRDLIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIRLILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEXXXXXXXXXXXXXXXEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLAEVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARPAMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQARERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRLFSSGELKELFTLKEDF 917
            E I  S +  A   ++ +MEG+          ++LP +++  L+ YQRTGVRW+WEL+ Q AGGI+GDEMGLGKT+Q   FL GL  S  L G  +IV+PATLM QW +E++ W P  RVVLLH S++        K  R  +KV++   G   G       V +TTYE ++L +  LL   W Y+ LDEG +IRNPDA+ T+  K+ PT HRL+LSG+PIQNNL ELWS+FDF FPG+LGTLP F+ E   PI LGG+ NASP Q   AY+CA++LR+LI PYLLRR+K +++    +PKK EQVL C LT  QR +Y   + S E+  IL+GK +    I +LRKICNH DL+   + E  +                                                  DYG+V RSGKL+V+ ++LP W  +GH+VLLF+QT+QM+DILE  +  +G  YLRMDG+T + +R  ++E +NTD +I++FLL+T+ GGLG++L GANRV++FDPDWNP  D+QARERAWR+GQKR VTIYRL+T+GTIEEKIY RQIFK  +++R+L DPKQKRLF    LK+LFTL E++
Sbjct:  429 ETIVSSTSFSADREKDTVMEGD----------YRLPYQMSEALFEYQRTGVRWMWELHTQAAGGIIGDEMGLGKTIQTICFLAGLHYSKLLDGPIIIVSPATLMQQWVNEIHKWWPPFRVVLLHDSSSV-------KGNR--KKVMKTVTGRKGG-------VLITTYEGVRLNQDLLLSEYWDYIVLDEGHRIRNPDADTTLAMKRFPTPHRLVLSGSPIQNNLTELWSVFDFVFPGKLGTLPTFQQEFVYPISLGGYVNASPIQLTTAYKCAVLLRELIKPYLLRRLKSNVLQ--QLPKKNEQVLLCHLTREQRDVYEKFLKSDEVVSILDGKRNALYGIDILRKICNHPDLLERKSNERPE--------------------------------------------------DYGNVDRSGKLKVMEQLLPLWRDEGHKVLLFAQTKQMMDILETFLVMKGMSYLRMDGDTPIKSRAYIVESYNTDTSIYVFLLSTKVGGLGLNLVGANRVIIFDPDWNPSNDMQARERAWRIGQKRDVTIYRLITSGTIEEKIYHRQIFKQFLTDRILKDPKQKRLFKYKHLKDLFTLGEEY 945          
The following BLAST results are available for this feature:
BLAST of NO12G02740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25756.12.600e-30476.51dna excision repair protein ercc-6 [Nannochloropsi... [more]
CBJ29096.11.900e-17741.61SNF2 family protein [Ectocarpus siliculosus][more]
XP_002286143.11.900e-16653.23rad54-like protein, partial [Thalassiosira pseudon... [more]
ORY79839.11.900e-15851.95SNF2 family N-terminal domain-domain-containing pr... [more]
XP_002176801.12.800e-15752.85predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX09892.13.700e-15749.74DNA excision repair protein ERCC-6 [Fistulifera so... [more]
GAX14417.12.400e-15649.49DNA excision repair protein ERCC-6 [Fistulifera so... [more]
PRW57121.15.300e-15650.62CHROMATIN REMODELING 8 [Chlorella sorokiniana][more]
PSC71103.15.300e-15650.18CHROMATIN REMODELING 8 [Micractinium conductrix][more]
PRP77131.13.800e-15448.40hypothetical protein PROFUN_14545 [Planoprotosteli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL127nonsL127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR009ngnoR009Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02740.1NO12G02740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02740.1NO12G02740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02740 ID=NO12G02740|Name=NO12G02740|organism=Nannochloropsis oceanica|type=gene|length=3410bp
ATGAAGCCGCAGCAGCAGAAAGGGGACGAGTATTCGCCAGGAGAAGCGGA
AGAAGCAGCCGAAGCTGCACCAGCAGCCGAAGCATCATCAACAGCAGCAA
CAGCACCAGTGACGGCATCAATTATGCATCCAGCAGAATCCGACGCCAAG
CGGAATCAAAAAAGGAAGAAACAGGCCTTCCCCAGAGGTCACGGCCCAAA
ACTGTCCTCGGCGACCAGCAGCTGCCGTCGCGCCCGCAGCAGCAGCAGCA
GCAGCAATGATATGGCGATTGTAATGGATGATAATAAAAAGAAGGGAACG
GACAAGGAGGGAGAGGAGGAAGGCGAGCCCACTGTTTCGTGCCCTGTGTG
TGGGAGGGGTGTGCCTGTTCAGGATAAGACCCAACCGGACGCTGAGCTTT
CGCAGCATTTGGACCGATGCATGCGTACGTCACGAAGGCGGGCTAGCGCG
GCATATAAGGACGAGGAGGACGAGGAGGACAAGGAGGGGTATAAAAAGAA
AAAAGTCAATAAGGAGGAGATAAAAGAGTCGAAGGAGGGAGTGAGGAAGG
AAGTGATGGATTTTGTGGACGTCGAGTCGTCGGACGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGGGAAGGAAGACGACGATGACCTAAAAACTGAAGC
GCCACTCTCTCTTCGGCTTCCGACTGGGCAGCGTAAGGCCGTTACTGCTG
CTGCTGTGAAAGATGGGAAAGGGAAGAAAAAGGAGAAGCAGATGATTGGA
GGGAAGCAAAAGGCGAGAGGCTTCCTGTTGGTGGATGACTTCGCGGACGA
TGATTATGAGCATAGGTTGGACGAGTATGAGGCGGCGTTGAGAGCGATGG
GGGGGAGCAGTGGTGACGAGGAGGAGGAGGAGGAGGAGGAGGAAGATGAG
GTGGAGGGGAAGGACGAGGGTAGTGGAACTGGTGGTGCTGGTGGGGGTGG
CAGTATTGCGAGGGAGCCTATACCTGGCTCGCGTGCTGCCCAAGCGACGG
CACGGAGGGAGGGAATGATGGAGGGGGAGACGGCGGGGCCATTGGAATTG
CCTGGTGGCTTCAAGTTGCCCGCGAGGATAAATCGGAAATTGTATTGGTA
CCAACGTACGGGGGTAAGGTGGTTGTGGGAGCTGTACAGGCAAGGGGCGG
GCGGTATATTAGGGGATGAAATGGGTTTGGGTAAGACGGTGCAGGTGTCT
GCATTTTTGGGCGGGCTGCAAAGAAGTGGAAGGCTCAGAGGCGGAGGATT
GATTGTGGCACCGGCGACGTTGATGAGCCAGTGGGCAAGCGAATTGTATG
CGTGGGCGCCATGGCTGCGGGTAGTGCTGCTGCATCGGTCGGCGGCGGCG
TTTGCGGCGCAGCCTGCGTATAAAGTGGGACGTTTTGTCAGGAAGGTCTT
GGAGATGGCGAATGGGGGAGGACAAGGAAGGAGGGGAGGAGGGGGTGTGG
TATGTCTGACGACTTATGAGAGTTTGAAACTCCTGAGGAAGGAGTTGCTG
GGCCATGCTTGGGCTTATGTGGCGTTGGACGAAGGACAGAAGATAAGGAA
CCCAGATGCGGAGgtaggtaggaaagagagggacgggcggtggaagggag
gatgtgtgggtttttgtgtatggtttggtcgtgtattgcagctctgtcca
tcacctcactaacactccctccctccctttcccctcctttcctcctcccc
tcccaccagATCACAGTCTGTGCCAAGCAGCTTCCAACCGTCCACCGGCT
CATACTCTCCGGCACTCCCATCCAAAACAATTTAAAAGAACTCTGGTCAT
TGTTTGATTTCTGTTTCCCGGGGCGTCTGGGGACCTTGCCGGCGTTCGAG
ACAGAGCTCGCGACCCCGATTAGATTAGGAGGATTCAGCAATGCAAGCCC
GAGCCAGGCTCAGTGTGCATACCGATGTGCCTTGGTCTTGCGCGATTTGA
TCCATCCGTATTTGCTGAGGAGGATGAAGAAGGATATCATGACGATCTTG
CCAATGCCGAAGAAAACGGAACAGGTATTGTTCTGTAAGCTCACGGCACG
TCAGCGAGCGCTGTACCGTGCCGCTATTTCCTCTCCTGAGATACGATTGA
TTTTGGAAGGGAAGGCGTCACATTTCAAGGCGATTACGGTGTTGAGAAAG
ATATGTAACCACGCAGACCTGGTCGCAGGGCCGAATGAGGAAGGCGTTGA
TCTGATGTCGCGAATCGTAGCCGGCGGGGGATGGGCGGATGAGTGGCACG
AAAGCGACGATGAGGACGACGACGAGGATGGGGTGGATGAGGCGGCGAGA
ATGGTCATGCCACGCGCAGCGAAAGGAGCCTTGAAGCCAGTGACAGCTGC
AGATTATGGTGACGTAGCCCGGTCGGGGAAGCTGCAGGTGCTTGCTGAAG
TCTTGCCAAGGTGGGAGAAGCAGGGGCATCGTGTCCTCCTATTTTCCCAG
ACCCGCCAGATGCTCGATATTCTGGAACGATTAGTGAAGCGACAGGGATG
GGGATACTTACGGATGGATGGTAACACGAACGTAGGAGCTCGTCCAGCGA
TGATTGAACGCTTCAATACCGACGAGAATATTTTCATTTTTCTCCTGACT
ACACGGACGGGGGGATTGGGGATTTCCTTGACTGGTGCGAACCGCGTAGT
GCTTTTTGACCCCGACTGGAACCCACAGACGGACATTCAGGCAAGAGAGA
GAGCGTGGCGGCTGGGGCAGAAGCGGGCTGTGACGATATACAGATTGGTG
ACGACAGGGACAATCGAGGAGAAGATTTATCAAAGGCAGATCTTCAAGAC
GGCGATTTCGAATCGGGTTTTGGTGGACCCGAAGCAGAAGCGGTTGTTCT
CCTCGGGGGAGTTGAAGGAGCTATTCACATTAAAAGAGGATTTTGGAGGA
GGAGGAGGGGGCCAAAGGGATGGCGGTAGGGTGGATGAGGAGGCGCCTAA
TGATACAGCGATGGAATTTATGGAGGGGGTGGTAAGGAGGTCGGATTTGA
AGAAGAGAGGTGAGAGGAAGTGGGAAAAGAAGAAGGAGGGAGAGAAGAAG
GAGAAGCGAAGGGAAGAAGAAGAAAGAGAAGGGGAACTGCGCGAGGACGA
CGATGAGGGAAGCGTGGGCGTGCCTGTGGAATATGAAGAAGAGCAAGAGC
AGGAGCAGGGGCAGCAGCAGGACGAAGAAGACAGTAAGATATTGCGGGCT
GTCTTTGAAGGCCGGGGACTGTCCAGCATCCTTAGTCACGACGTGGTCGA
GTCCGGGAAACGAAACACTGAAATGTGGGTACAAATGCAAGAACATGCCA
AACGCATCGCCGACCGGGCAGCTGCGGCTCTCCAGGATTCAGCAGCCTTG
GTCCTGGCGACGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCGGGG
AGGGGGGTGA
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protein sequence of NO12G02740.1

>NO12G02740.1-protein ID=NO12G02740.1-protein|Name=NO12G02740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1088bp
MKPQQQKGDEYSPGEAEEAAEAAPAAEASSTAATAPVTASIMHPAESDAK
RNQKRKKQAFPRGHGPKLSSATSSCRRARSSSSSSNDMAIVMDDNKKKGT
DKEGEEEGEPTVSCPVCGRGVPVQDKTQPDAELSQHLDRCMRTSRRRASA
AYKDEEDEEDKEGYKKKKVNKEEIKESKEGVRKEVMDFVDVESSDEEEEE
EEEEEGKEDDDDLKTEAPLSLRLPTGQRKAVTAAAVKDGKGKKKEKQMIG
GKQKARGFLLVDDFADDDYEHRLDEYEAALRAMGGSSGDEEEEEEEEEDE
VEGKDEGSGTGGAGGGGSIAREPIPGSRAAQATARREGMMEGETAGPLEL
PGGFKLPARINRKLYWYQRTGVRWLWELYRQGAGGILGDEMGLGKTVQVS
AFLGGLQRSGRLRGGGLIVAPATLMSQWASELYAWAPWLRVVLLHRSAAA
FAAQPAYKVGRFVRKVLEMANGGGQGRRGGGGVVCLTTYESLKLLRKELL
GHAWAYVALDEGQKIRNPDAEITVCAKQLPTVHRLILSGTPIQNNLKELW
SLFDFCFPGRLGTLPAFETELATPIRLGGFSNASPSQAQCAYRCALVLRD
LIHPYLLRRMKKDIMTILPMPKKTEQVLFCKLTARQRALYRAAISSPEIR
LILEGKASHFKAITVLRKICNHADLVAGPNEEGVDLMSRIVAGGGWADEW
HESDDEDDDEDGVDEAARMVMPRAAKGALKPVTAADYGDVARSGKLQVLA
EVLPRWEKQGHRVLLFSQTRQMLDILERLVKRQGWGYLRMDGNTNVGARP
AMIERFNTDENIFIFLLTTRTGGLGISLTGANRVVLFDPDWNPQTDIQAR
ERAWRLGQKRAVTIYRLVTTGTIEEKIYQRQIFKTAISNRVLVDPKQKRL
FSSGELKELFTLKEDFGGGGGGQRDGGRVDEEAPNDTAMEFMEGVVRRSD
LKKRGERKWEKKKEGEKKEKRREEEEREGELREDDDEGSVGVPVEYEEEQ
EQEQGQQQDEEDSKILRAVFEGRGLSSILSHDVVESGKRNTEMWVQMQEH
AKRIADRAAAALQDSAALVLATQQQQQQQQQQQRGGG*
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Synonyms
Publications