NO12G02170, NO12G02170 (gene) Nannochloropsis oceanica

Overview
NameNO12G02170
Unique NameNO12G02170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1993
Alignment locationchr12:623645..625637 -

Link to JBrowse

Properties
Property NameValue
DescriptionAutophagy protein 16
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:623645..625637 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR013923Autophagy-rel_prot_16
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of NO12G02170 vs. NCBI_GenBank
Match: EWM25855.1 (autophagy protein 16 [Nannochloropsis gaditana])

HSP 1 Score: 734.6 bits (1895), Expect = 2.500e-208
Identity = 383/588 (65.14%), Postives = 438/588 (74.49%), Query Frame = 0
Query:   12 TSIHWRIHILRLLQQQNEEETQPFRGIIQSYTQIARQNQALKLHLEHLEKELVILRHGAAEISGSSVGSXXXXXXXKEDQVRKLHRKVLRLQEELTDKFRLEVQGTTSQLQMSKEIQDLFQKCQAARAESEASKAEVEGLRAREPAFVAQAAMATTDLEIVQGELGRARARLDAVEKERTRLRAQNEELIQRIVGEKSRNADEMNRMTELVEQMRVQLRAQGVQAGSQGGVNSQKADLAMSLQSPGRDGLPSRCYQQFKAHATDVNDVAYNENGAWLATAGGDGYVRVWEERTGRLKTTLHGADVMLGLDFRGDFVVGGSSDHTCKLWSLASERVHRTFVGHSGNVYAVKMVAGDGRAILTGGADRTIRLWDVGRVNCKQILRSGSTCNGLDIGMDGHVPVSAHQDGGLRVWDLRAGNPSMIVRAFETQATSVQYGQNFTVLANSRDNVIKIVDTRTFETLHVLRHEDYRTFLNWSRACFSPSSAYVAAGSANGQFFIWDAVTGDVKSTLN--ADAMPSLSGSGGRMGIRNXXXXXXXXXXXXXXXXXXXXVVESGR-------GITNCAWKGQQLATCTKGGDVCLW 591
            T+ HWR  +L  L+QQN+ E +PFRGII SYT +ARQNQ LK H++H EKELV LRH A E   S           K++Q RKL  KV RLQEELTDK RLEVQGTTSQL MSKEIQDLFQK Q +RAE+E  + EV+G RARE    AQA MAT DLEIVQ EL R RARL+ VEKE   +R QNEEL++R+VGEKS NA+EMNRMTELVE+MR QL+A+ ++  S   V +     A+       D LPS C QQF+AHA DVND+ Y + G WLATAGGDG VRVWE  +GRLK TLHG DVMLGLDFRGDFVVGGSSDHTCKLWSLAS R+HRTFVGHSGNVYAVK++AGD RA+LTGGADRTIRLWDVGR +C+QILRSGSTCNGLDIGMDGH PVSAHQDGGLR WDLRAGNP+MIVRAFETQATSVQYGQNFT LANSRDN +KI+DTRTFETLHVLRHEDYRTFLNWSRACFSPSS+YVAAGSA GQ F+W+  +G++KS L+   D+  S S S     +R                        SG        GI +CAWK  +L+ CT+ G+VC+W
Sbjct:   13 TAAHWRTSVLNALKQQNDVEVEPFRGIILSYTDLARQNQVLKAHVDHQEKELVTLRHEALEQRDSKGQGGAGACGAKDEQTRKLQSKVQRLQEELTDKLRLEVQGTTSQLNMSKEIQDLFQKWQLSRAEAEKLRTEVDGFRAREATLEAQAGMATRDLEIVQEELKRVRARLNTVEKEYLDVRRQNEELVRRMVGEKSHNAEEMNRMTELVERMRAQLKARNLEIESTQAVAADVEIEAVPSSGLRTDELPSHCNQQFRAHAADVNDLVYCDTGQWLATAGGDGKVRVWEAGSGRLKATLHGQDVMLGLDFRGDFVVGGSSDHTCKLWSLASGRLHRTFVGHSGNVYAVKLIAGDLRAVLTGGADRTIRLWDVGRASCRQILRSGSTCNGLDIGMDGHAPVSAHQDGGLRFWDLRAGNPTMIVRAFETQATSVQYGQNFTALANSRDNALKIIDTRTFETLHVLRHEDYRTFLNWSRACFSPSSSYVAAGSATGQLFVWETASGEMKSILSHAPDSRHSFSSSPEHDELRCQGMSLSASGDRIRTSSEALDGSTSGAGQRGGGGGIISCAWKASRLSACTRSGNVCIW 600          
BLAST of NO12G02170 vs. NCBI_GenBank
Match: XP_003294930.1 (hypothetical protein DICPUDRAFT_160021 [Dictyostelium purpureum] >EGC28544.1 hypothetical protein DICPUDRAFT_160021 [Dictyostelium purpureum])

HSP 1 Score: 215.7 bits (548), Expect = 3.900e-52
Identity = 157/545 (28.81%), Postives = 280/545 (51.38%), Query Frame = 0
Query:    2 VVAPASSLRSTSIHWRIHILRLLQQQNEEETQPFRGIIQSYTQIARQNQALKLHLEHLEKELVILRHGA----AEISGSSVGSXXXXXXXKEDQVRKLHRKVLRLQEELTDKFRLEVQGTTSQLQMSKEIQDLFQKCQAARAESEASKAEV----EGLRAREPAFVAQAAMATTDLEIVQGELGRARARLDAVEKERTRLRAQNEELIQRIVGEKSRNADEMNRMTELVEQMRVQLRAQGVQAGSQGGVNSQKADLAMSLQSPGRDG----------------LPSRCYQQFKAHATDVNDVAYNENGAWLATAGGDGYVRVWEERTGRLKTTLHGA-DVMLGLDF--RGDFVVGGSSDHTCKLWSLASERVHRTFVGHSGNVYAVKMVAGDGRAILTGGADRTIRLWDVGRVNCKQILRSGSTCNGLDI-GMDGHVPVSAHQDGGLRVWDLRAGNPSMIVRAF-ETQATSVQYG--QNFTVLANSRDNVIKIVDTRTFETLHVLRHEDYRTFLNWSRACFSPSSAYVAAGSANGQFFIWDAVTG 516
            +++ AS   ++   W+  I+R L  +N+ +T  +  I++ Y+ + ++ + L       EKE+V LR  A              XXXXXXX      ++ +K+ +LQE+LT+ ++   +  TS L ++ + +DL  +  +   E + +K  +    + ++  E   + +  ++    +I++ EL   +      E +  +L  +N  L++R + +K+  A +MN   +  ++M  Q     V    +  V    A++ + + S   +                 LPS+  +++ AH +++  +A+N  G  +A+ GGD  V+VW+  +G+ K TL GA   ++ ++F    + V+G S+D++ +LWS    R   T  GH G VY  K    +   ++TG  DRTI+LWD+ +  C + +   S+CN L I G  G+  VS H D  +R WD   G P+ ++ +  E Q TS+      +  +L NSRD+ +KI+DTRTFET+   + ++YR  LNW++A +SP  AY+A+GS +G   IWDA  G
Sbjct:   17 IISIASQSFNSIPEWKRDIIRQLNYRNQNQTNCYSDIMKIYSDLLKRERTLNDRTLLYEKEIVSLRKDANRXXXXXXXXXXXXXXXXXXXXXXXXEEMEQKLYKLQEDLTNSYKRNAENATSILNLNDKNKDLQNEIMSKEIEVDRAKQVLQQNDDAIKRLEMTIIEKENVS----QILRDELTSLQTEYLHNESKVVKLEQENSSLVERWLRKKNEEASKMNEANDFYQKMVEQRDLSFVSPAKKSQVPDSYANVVVDISSEEAEKSKIPNIEKGVFTKEALLPSKAKRRWTAHNSEIYCIAFNTMGNLMASGGGDKAVKVWDIISGQTKATLLGASQSIMSVEFSPNDETVLGTSNDNSARLWSTELGRSRHTLTGHIGKVYTGKFF--NPNRVVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLAILGGTGNHLVSGHVDHSVRFWDSNIGEPTHVLSSIHEGQITSITNSPVNSHHILTNSRDHTLKIIDTRTFETIRTFKDQEYRNGLNWTKAAWSPDGAYIASGSIDGSICIWDANNG 555          
BLAST of NO12G02170 vs. NCBI_GenBank
Match: XP_643673.1 (autophagy protein 16 [Dictyostelium discoideum AX4] >O15736.1 RecName: Full=Protein tipD >AAB70659.1 TipD [Dictyostelium discoideum] >EAL69727.1 autophagy protein 16 [Dictyostelium discoideum AX4])

HSP 1 Score: 209.9 bits (533), Expect = 2.100e-50
Identity = 151/556 (27.16%), Postives = 277/556 (49.82%), Query Frame = 0
Query:    2 VVAPASSLRSTSIHWRIHILRLLQQQNEEETQPFRGIIQSYTQIARQNQALKLHLEHLEKELVILRHGAAEISGSSVGSXXXXXXXKE----------DQVRKLHRKVLRLQEELTDKFRLEVQGTTSQLQMSKEIQDLFQKCQAARAESEASKA----EVEGLRAREPAFVAQAAMATTDLEIVQGELGRARARLDAVEKERTRLRAQNEELIQRIVGEKSRNADEMNRMTELVEQMRVQLRAQGVQAGSQGGVNSQKADLAMSLQS---------------PGRDGLPSRCYQQFKAHATDVNDVAYNENGAWLATAGGDGYVRVWEERTGRLKTTLHGAD---VMLGLDFRGDFVVGGSSDHTCKLWSLASERVHRTFVGHSGNVYAVKMVAGDGRAILTGGADRTIRLWDVGRVNCKQILRSGSTCNGLDI-GMDGHVPVSAHQDGGLRVWDLRAGNPSMIVRAF-ETQATSVQYGQNFT--VLANSRDNVIKIVDTRTFETLHVLRHEDYRTFLNWSRACFSPSSAYVAAGSANGQFFIWDAVTGDVKSTL 522
            +++ ++   ++ + W+  I+R L  +N+ +T  +   ++ YT + ++ + L       EKE+V LR+            XXXXXXX              + ++ +K+ +LQE+LT+ ++      +S L ++ + +DL  +  +   E E  ++    +++ ++  E   + +  ++    +I++ EL   +      E +  +L  +N  L++R + +K+  A +MN   +  ++M  Q  +   +A  Q  ++   ++L + L                      LPS+  +++  H +++  +A+N  G  LAT GGD  V+VW+  +G+ K+TL GA    V +      + ++G S+D++ +LW+    R   T  GH G VY  K +  +   ++TG  DRTI+LWD+ +  C + +   S+CN L I G  G    S H D  +R WD  AG P+ ++ +  E Q TS+      T  +L NSRD+ +KI+D RTF+T+   +  +YR  LNW++A +SP   Y+A+GS +G   IWDA  G     L
Sbjct:   30 IISTSAQSFNSIVEWKRDIIRQLNDRNQNQTNNYSEFMRIYTDLLKRERTLNDRTLLYEKEIVSLRNXXXXXXXXXXXXXXXXXXXXXXXXXXVSGMGSTIEEMEQKLFKLQEDLTNSYKRNADNASSILLLNDKNKDLQNELMSKEIEIERIRSTIQQDLDSIKRLEMVVIEKENVS----QIIRDELSSLQTEFLHNESKVVKLEQENSSLVERWLRKKNEEASKMNEANDFYQKMVEQRDSTPAKAAVQ--LSESISNLVVKLPDANDVPIPIVLERGVFSSEAMLPSKAKKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFI--NSNRVVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIRTFKDPEYRNGLNWTKASWSPDGRYIASGSIDGSICIWDATNGKTVKVL 577          
BLAST of NO12G02170 vs. NCBI_GenBank
Match: GAY00842.1 (Hypothetical protein PINS_008701 [Pythium insidiosum])

HSP 1 Score: 195.3 bits (495), Expect = 5.400e-46
Identity = 150/514 (29.18%), Postives = 244/514 (47.47%), Query Frame = 0
Query:   22 RLLQQQNEEETQPFRGIIQSYTQIARQNQALKLHLEHLEKELVILRHGAAEISGSSVGSXXXXXXXKEDQVRKLHRKVL-RLQEELTDKFRLEVQGTTSQLQMSKEIQDLFQKCQAARAESE--ASKAEVEGLRAREPAFVAQAAMATTDLEIVQGELGRARARLDAVEKERTRLRAQNEELIQRIVGEKSRNADEMNRMTELVEQMRVQLR-AQGVQAGSQGGVNSQKADLAMSLQSPGR--DGLPSRCYQQFKAHATDVNDVAYNENGAWLATAGGDGYVRVWEERTGRLKTTLHGAD-----VMLGLDFRGDFVVGGSSDHTCKLWSLASERVHRTFVGHSGNVYAVKMVAGDGRAILTGGADRTIRLWDVGRVNCKQILRSGSTCNGLDIGMDGHVPVSAHQDGGLRVWDLRAGNPSMIVRAFET-QATSVQYGQNFT-VLANSRDNVIKIVDTRTFETLHVLRHEDYRTFLNWSRACFSPSSAYVAAGSANGQFFIWDAVTGDVKSTLN 523
            RLL ++N  E + FR +I SY Q+  ++ A       L     +    +A +   S            D V + +   + +L++EL+DK         SQLQ+  E + L Q+ Q    + E  A + E E L   +     +       L +V+ EL R +  L+A E++   LR +  EL  +++  KS    +     E  ++M    R   G  + S       +A   + +    +    + SR  Q  +AHAT+VN V +N +G  L +   DG VR WE  + R      G       + + +   G+ V+G   D  C +W + + RV +T  GH G V   +        ++TG +DR++R+WDV +    Q +   S+CN L + + G    SAHQDG +R WD R+  P   +      Q TSV + ++   +L NSRDN ++++DTRTFE++  LRH+ Y    +W++A  SP  AY AAG ANG  F+W+ ++G ++  L+
Sbjct:   14 RLLDERNRREVEYFRELIASYQQLLFRSNA----TGSLAASSALSMSRSASLHRPSTPPEVSGASDASDAVAQRYLSTIQQLEKELSDKNAQLATYAGSQLQLVNESKQLLQERQQWEHQLEXFAKRLEEEMLLNEQKDXAMKE--LNDALLLVREELVRHKELLEATEQDNAALRTRIRELEAQLL-RKSEMMQQWLEAHEPPDEMTTPRRXPSGRXSXSMASQEMAEAVSRLIVDQSVKISSRVVSRVAQSIRAHATEVNSVCFNASGKVLFSGSSDGTVRAWEATSCRAMGEYRGTGTAHPLLCVRVSEDGEMVLGTGCDRKCFVWRVGTGRVFQTLTGHKGKVLXAEFSTLAPNEVITGSSDRSLRVWDVAKGRSVQSVNCRSSCNDLAMALGGQF-ASAHQDGAVRFWDARSKQPLRELSGLHADQVTSVSFSRDGNRLLTNSRDNTLQLLDTRTFESVVTLRHDAYHAGFDWAQASLSPDGAYAAAGGANGHVFLWNTISGKLERELS 519          
BLAST of NO12G02170 vs. NCBI_GenBank
Match: XP_022932333.1 (autophagy-related protein 16 [Cucurbita moschata] >XP_022932342.1 autophagy-related protein 16 [Cucurbita moschata] >XP_023530786.1 autophagy-related protein 16 [Cucurbita pepo subsp. pepo] >XP_023530787.1 autophagy-related protein 16 [Cucurbita pepo subsp. pepo] >XP_023530788.1 autophagy-related protein 16 [Cucurbita pepo subsp. pepo] >XP_023530789.1 autophagy-related protein 16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.2 bits (487), Expect = 4.600e-45
Identity = 134/448 (29.91%), Postives = 211/448 (47.10%), Query Frame = 0
Query:  104 EELTDKFRLEVQGT-TSQLQMSKEIQDLFQKCQAARAESEASKAEVEGL-----RAREPA--FVAQAAMATTDLEIVQGELGRARARLDAVEKERTRLRAQNEELIQRIVGEKSRNADEMNRMTELVEQMRVQLRAQGVQAGSQGGVNSQKADLAMSLQSPGRDGLPSRCYQQFKAHATDVNDVAYNENGAWLATAGGDGYVRVWEERTGRLKTTLHGA-----DVMLGLDFRGDFVVGGSSDHTCKLWSLASERVHRTFVGHSGNVYAVKMVAGDGRAILTGGADRTIRLWDVGRVNCKQILRSGSTCNGLDIGMDGHVPVSAHQDGGLRVWDLRAGNPSMIVRAFETQATSVQYGQN-FTVLANSRDNVIKIVDTRTFETLHVLRHEDYRTFLNWSRACFSPSSAYVAAGSANGQFFIWDAVTGDVKSTLNADAMPSLSGSGGRMG 538
            +E  +K  LE+Q    +Q ++S+++     + +A+++  E   A ++ L     RAR+      A   M    +E+   E    +A+L+A+  +     A+N  LI R + +K ++A+ +N    L E M  +L+A G++  +Q  V+          +      +PS C    +AH      + +  N   L + G D  V+VW+  TG L +TLHG      D+ +  D R   V+  SS +    W + S RV  T  GHS  V AV +     R +++   DRTI++WD+ +  C + L   S CN +   MDG    S H DG LR+WD++ G     V       TS+   +N  T+L + RDN+  + D R+ E    LR    R   NWSR+C SP   +VAAGSA+G   +W     D+ STL       L  S   +G
Sbjct:   50 KEKAEKLELELQQCYKAQSRLSEQLVVEVAEGRASKSSIEEKDATIDNLQQELTRARDECSQLKADLEMKIKAMELAISESQELKAQLEAMTIKAKNTEAENNMLIDRWMLQKMKDAERLNEANALYEDMIDRLKASGLEKLAQQQVDGVVRQSEEGAEYFVESTVPSVCKHSIRAHEGGCGTILFENNSGKLISGGQDRTVKVWDTNTGSLSSTLHGCLGSVLDLAVTHDNRS--VIAASSSNNLYAWDVGSGRVRHTLTGHSDKVCAVDVSKISSRHVVSAAYDRTIKIWDLQKGYCTKTLIFPSNCNAVRFSMDGQTICSGHMDGNLRLWDIQTGKLLSEVAGHSLAVTSLSLSRNGNTILTSGRDNLHNLFDIRSLEVCGTLRASGNRVASNWSRSCISPDDNHVAAGSADGSVHVWSISKHDIVSTLKEHTASVLCCSWSGLG 495          
BLAST of NO12G02170 vs. NCBI_GenBank
Match: XP_011653271.1 (PREDICTED: protein tipD [Cucumis sativus] >KGN63513.1 hypothetical protein Csa_1G002820 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 1.900e-43
Identity = 135/457 (29.54%), Postives = 213/457 (46.61%), Query Frame = 0
Query:   89 EDQVRKLHRKVLRLQEELTDKFRLEVQGTTSQLQMSKE--IQDLFQKCQAARAESEASKAEVEGLRAREPAFVAQAAMATTDLEIVQGELGRARARLDAVEKERTRLRAQNEELIQRIVGEKSRNADEMNRMTELVEQMRVQLRAQGVQAGSQGGVNSQKADLAMSLQSPGRDGLPSRCYQQFKAHATDVNDVAYNENGAWLATAGGDGYVRVWEERTGRLKTTLHGA-----DVMLGLDFRGDFVVGGSSDHTCKLWSLASERVHRTFVGHSGNVYAVKMVAGDGRAILTGGADRTIRLWDVGRVNCKQILRSGSTCNGLDIGMDGHVPVSAHQDGGLRVWDLRAGNPSMIVRAFETQATSVQYGQN-FTVLANSRDNVIKIVDTRTFETLHVLRHEDYRTFLNWSRACFSPSSAYVAAGSANGQFFIWDAVTGDVKSTLNADAMPSLSGSGGRMG 538
            E ++++ ++   RL E+L  +   EV+ T+  L   KE  I +L Q+   AR E    KA++E              +    LE+   E    + +L+A+  +     A+N+ L+ R + +K ++A+ +N    L E M  +L+A G++  +Q  V+          +      +PS C  + + H      + +  N   L + G D  V++W+  TG L +TLHG      D+ +  D R   V+  SS +    W ++S RV  T  GHS  V AV +     R +++   DRTI++WD+ +  C +     S CN +   MDG    S H DG LR+WD++ G     V       TS+   +N  T+L + RDN+  + D R+ E    LR    R   NWSR+C SP   YVAAGSA+G   +W     D+ STL       L  S   +G
Sbjct:   57 ELELQQCYKAQSRLSEQLVVEV-AEVR-TSKSLIGEKEAVIDNLEQELSRARDECSQLKADLE--------------IKLKALELALCENQEIKTQLEAMTVKAKNAEAENKMLVDRWMLQKMQDAERLNEANALYEDMIDRLKASGLEKLAQQQVDGVVRQSEEGAEFFVESTVPSVCKHRIRGHEGGCGTILFENNSGKLISGGQDRTVKLWDTNTGSLSSTLHGCLGSVLDLAITHDNRS--VIAASSSNNLYAWDISSGRVRHTLTGHSDKVCAVDVSKVSSRYVVSAAYDRTIKIWDLQKGYCTKTFIFASNCNAVRFSMDGQTICSGHVDGNLRLWDIQTGKLISEVAGHSLAVTSLSLSRNGNTILTSGRDNLHNLFDIRSLEVCGTLRASGNRVASNWSRSCISPDDNYVAAGSADGSVHVWSISKHDIVSTLKESTASVLCCSWSGLG 495          
BLAST of NO12G02170 vs. NCBI_GenBank
Match: XP_022882793.1 (autophagy-related protein 16 [Olea europaea var. sylvestris])

HSP 1 Score: 186.4 bits (472), Expect = 2.500e-43
Identity = 142/514 (27.63%), Postives = 228/514 (44.36%), Query Frame = 0
Query:   89 EDQVRKLHRKVLRLQEELTDKFRLEVQGTTSQLQMSKEIQDLFQKCQAARAESEASKAEVEGLRAREPAFVAQAAMATTDLEIVQGELGRARARLDAVEKERTRLRAQNEELIQRIVGEKSRNADEMNRMT----ELVEQMRVQLRAQGVQAGSQGGVNSQKADLAMSLQSPGRDGLPSRCYQQFKAHATDVNDVAYNENGAWLATAGGDGYVRVWEERTGRLKTTLHGA-----DVMLGLDFRGDFVVGGSSDHTCKLWSLASERVHRTFVGHSGNVYAVKMVAGDGRAILTGGADRTIRLWDVGRVNCKQILRSGSTCNGLDIGMDGHVPVSAHQDGGLRVWDLRAGNPSMIVRAFETQATSVQYGQNFT-VLANSRDNVIKIVDTRTFETLHVLRHEDYRTFLNWSRACFSPSSAYVAAGSANGQFFIWDAVTGDVKSTLNADAMPSLSGSGGRMGIRNXXXXXXXXXXXXXXXXXXXXVVESGRGITNCAWK--GQQLATCTKGGDVCLW 591
            E ++++ ++   RL E+L     +EV  +     + +E + L    Q     +E S A  E  R+R  A + + + A   LE++  E    + +L+A     +   A+N+ LI R + +K ++A+ +N       ++++Q++V    Q  +    G V   +      ++SP    +P+ C Q+  AH      + +  N + L + G D  +++W+  TG    TLHG      D+ +  D R   V+  SS +   +W ++S RV  T  GH   V AV +     R++++   DRTI++WD+ +  C   L   S CN L   MDG    S H DG LR+WD++ G     V A     TS+   +N   +L + RDN+  + D RT E    LR   YR   NWSR+C S    YVA+GS +G   IW      + STL     P LS                                        C+W   G+ LAT  K G++C+W
Sbjct:   55 EVELQQCYKAQARLSEQLV----VEVADSRVSKALVQEKEALISDLQ-----NELSLARDE--RSRLTACLEEKSKA---LELLMNEHQSLKEQLEATTLRASNAEAENKMLIDRWMLQKMKDAERLNDANSVYGDILDQLKVSSIEQLARQQVDGVVRQSEEGAECYIESP----IPTTCRQRIPAHNGGCASILFEYNSSKLMSGGQDQTIKIWDTNTGSQSQTLHGCLGTVLDLCITHDNRS--VIAASSANNLYVWDVSSGRVRHTLTGHVDKVCAVDVSKVSTRSVVSAAYDRTIKVWDLHKGYCVNTLLFQSNCNTLCFSMDGETICSGHVDGNLRLWDIKTGKLLSEVAAHSLAITSLSLSRNGNMILTSGRDNLHNLFDIRTLEICATLRSNGYRVASNWSRSCISADDGYVASGSVDGSVHIWSVANAKIVSTLKEHTAPVLS----------------------------------------CSWSGLGKPLATSDKNGNICIW 508          
BLAST of NO12G02170 vs. NCBI_GenBank
Match: XP_008464485.1 (PREDICTED: autophagy-related protein 16 [Cucumis melo])

HSP 1 Score: 186.0 bits (471), Expect = 3.300e-43
Identity = 134/457 (29.32%), Postives = 212/457 (46.39%), Query Frame = 0
Query:   89 EDQVRKLHRKVLRLQEELTDKFRLEVQGTTSQLQMSKE--IQDLFQKCQAARAESEASKAEVEGLRAREPAFVAQAAMATTDLEIVQGELGRARARLDAVEKERTRLRAQNEELIQRIVGEKSRNADEMNRMTELVEQMRVQLRAQGVQAGSQGGVNSQKADLAMSLQSPGRDGLPSRCYQQFKAHATDVNDVAYNENGAWLATAGGDGYVRVWEERTGRLKTTLHGA-----DVMLGLDFRGDFVVGGSSDHTCKLWSLASERVHRTFVGHSGNVYAVKMVAGDGRAILTGGADRTIRLWDVGRVNCKQILRSGSTCNGLDIGMDGHVPVSAHQDGGLRVWDLRAGNPSMIVRAFETQATSVQYGQN-FTVLANSRDNVIKIVDTRTFETLHVLRHEDYRTFLNWSRACFSPSSAYVAAGSANGQFFIWDAVTGDVKSTLNADAMPSLSGSGGRMG 538
            E ++++ ++   RL E+L  +   EV+ T+  L   KE  I +L Q+    R E    KA++E              +    LE+   E    + +L+A+  +     A+N+ L+ R + +K ++A+ +N    L E M  +L+A G++  +Q  V+          +      +PS C  + + H      + +  N   L + G D  V++W+  TG L +TLHG      D+ +  D R   V+  SS +    W ++S RV  T  GHS  V AV +     R +++   DRTI++WD+ +  C +     S CN +   MDG    S H DG LR+WD++ G     V       TS+   +N  T+L + RDN+  + D R+ E    LR    R   NWSR+C SP   YVAAGSA+G   +W     D+ STL       L  S   +G
Sbjct:   57 ELELQQCYKAQSRLSEQLVVEV-AEVR-TSKSLIAEKEAVIDNLEQELSRTRDECSQLKADLE--------------IKIKALELALCENQEIKTQLEAMTVKAKNAEAENKMLVDRWMLQKMQDAERLNEANALYEDMIDRLKASGLEKLAQQQVDGVVRQSEEGAEFFVESTVPSVCKHRIRGHEGGCGTILFENNSGKLISGGQDRTVKLWDTNTGSLSSTLHGCLGSVLDLAITHDNRS--VIAASSSNNLYAWDISSGRVRHTLTGHSDKVCAVDVSKVSSRYVVSAAYDRTIKIWDLQKGYCTKTFIFASNCNAVRFSMDGQTICSGHVDGNLRLWDIQTGKLISEVAGHSLAVTSLSLSRNGNTILTSGRDNLHNLFDIRSLEVCGTLRASGNRVASNWSRSCISPDDNYVAAGSADGSVHVWSISKHDIVSTLKESTASVLCCSWSGLG 495          
BLAST of NO12G02170 vs. NCBI_GenBank
Match: XP_006280326.1 (autophagy-related protein 16 [Capsella rubella] >EOA13224.1 hypothetical protein CARUB_v10026249mg [Capsella rubella])

HSP 1 Score: 185.7 bits (470), Expect = 4.300e-43
Identity = 132/457 (28.88%), Postives = 213/457 (46.61%), Query Frame = 0
Query:  104 EELTDKFRLEVQGTTSQLQMSKEIQDLFQKCQAARAESEASKA------------EVEGLRAREPAFVAQAAM--ATTDLEIVQGELGRARARLDAVEKERTRLRAQNEELIQRIVGEKSRNADEMNRMTELVEQMRVQLRAQGVQAGSQGGVNSQKADLAMSLQSPGRD-----GLPSRCYQQFKAHATDVNDVAYNENGAWLATAGGDGYVRVWEERTGRLKTTLHGA---DVMLGLDFRGDFVVGGSSDHTCKLWSLASERVHRTFVGHSGNVYAVKMVAGDGRAILTGGADRTIRLWDVGRVNCKQILRSGSTCNGLDIGMDGHVPVSAHQDGGLRVWDLRAGNPSMIVRAFETQATSVQYGQNFT-VLANSRDNVIKIVDTRTFETLHVLRHEDYRTFLNWSRACFSPSSAYVAAGSANGQFFIWDAVTGDVKSTLNADAMPSLSGSGGRMG 538
            +E T+K   E+Q      Q  K    L ++     AES  SKA            + +  + RE     Q  +   T  ++++  E    R++L+ +     +  ++N+ LI R + +K ++A+ +N   +L E+M  +L+A G+++     +  Q+ D  +     G D      +PS C  +  AH      + +  N   L T G D  V++W+  +G L  +L+G+    + L +      V+  SS +   +W ++S RV  T  GH+  V AV +     R +++   DRTI+LWD+ +  C   +   S CN + + +DG    S H DG LR+WD++ G     V    +  TSV   +N   +L + RDNV  + DTRT E    LR    R   NWSR+C SP   YVAAGSA+G   +W    G++ S L     P L  S   +G
Sbjct:   49 KEKTEKLETELQ------QCYKAQSRLSEQLVIEVAESRTSKAFLQEKELLIIDLQKDLTQTREECTRLQEELDDKTKTVDVLITENQEIRSQLEEMTNRAQKAESENKMLIDRWMLQKMQDAERLNEANDLYEEMLAKLKANGLES-----LARQQVDGIVRRNEDGTDHFVESTIPSTCGHRIHAHEGGCGSIIFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDLAVTHDNKSVIAASSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFASNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGTVHVWSLSNGNIVSVLKEQTSPILCCSWSGIG 494          
BLAST of NO12G02170 vs. NCBI_GenBank
Match: XP_012198889.1 (hypothetical protein SPRG_22135 [Saprolegnia parasitica CBS 223.65] >KDO30499.1 hypothetical protein SPRG_22135 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 185.3 bits (469), Expect = 5.600e-43
Identity = 118/359 (32.87%), Postives = 181/359 (50.42%), Query Frame = 0
Query:  168 DLEIVQGELGRARARLDAVEKERTRLRAQNEELIQRIVGEKSRNADEMNRMTEL--VEQMRVQLRAQGVQAGSQGGVNSQKADLAMSLQSPGRDGLPSRCYQQFKAHATDVNDVAYNENGAWLATAGGDGYVRVWEERTGRLKTTLHGAD-----VMLGLDFRGDFVVGGSSDHTCKLWSLASERVHRTFVGHSGNVYAVKMVAGDGRAILTGGADRTIRLWDVGRVNCKQILRSGSTCNGLDIGMDGHVPVSAHQDGGLRVWDLRAGNP-SMIVRAFETQATSVQYGQN-FTVLANSRDNVIKIVDTRTFETLHVLRHEDYRTFLNWSRACFSPSSAYVAAGSANGQFFIWDAVTGDV 518
            ++ +++ EL R R R +  E+E    R +  EL  ++V +    A+ + +  EL  V   +  +R   + AG  GG +S      +SLQ            +  +AHAT+VN V +N +G  + +A  DG VR W+  + + K    G       + + +   G+ V+G   D  C++W + + R+  T +GH G VYA + +      +LTGGADR+IR+WDV      +     STCN + +G+ G    SAHQD  +R WD R   P   +      Q TSV Y  + + +L NSRDN +K++DTRT+  L       Y    NWS+A  +P  AY+AAGS  G   IWDA++  V
Sbjct:  443 EMHVLREELNRQRVRAELAEQETEEFRRRVRELESQLVQKSKMMAELVLQEPELKPVPLRQEAMRRDELPAG--GGPSS-----LVSLQHG----------KSIRAHATEVNSVCFNGSGKIVFSASSDGTVRAWDAHSCQAKADYRGLGMSQPLICVRVSEDGELVLGTGCDRICQVWRVGTGRIAHTLLGHKGKVYAAEFLLDRTNEVLTGGADRSIRVWDVVSGRNLKSFSCRSTCNDIAVGVGGQF-ASAHQDAAVRFWDARTKAPIHELSDVHSDQITSVSYASDGYKLLTNSRDNTLKLLDTRTYGELGTYTAPSYVCGFNWSKASLTPDGAYIAAGSTTGAVLIWDALSQQV 783          
The following BLAST results are available for this feature:
BLAST of NO12G02170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25855.12.500e-20865.14autophagy protein 16 [Nannochloropsis gaditana][more]
XP_003294930.13.900e-5228.81hypothetical protein DICPUDRAFT_160021 [Dictyostel... [more]
XP_643673.12.100e-5027.16autophagy protein 16 [Dictyostelium discoideum AX4... [more]
GAY00842.15.400e-4629.18Hypothetical protein PINS_008701 [Pythium insidios... [more]
XP_022932333.14.600e-4529.91autophagy-related protein 16 [Cucurbita moschata] ... [more]
XP_011653271.11.900e-4329.54PREDICTED: protein tipD [Cucumis sativus] >KGN6351... [more]
XP_022882793.12.500e-4327.63autophagy-related protein 16 [Olea europaea var. s... [more]
XP_008464485.13.300e-4329.32PREDICTED: autophagy-related protein 16 [Cucumis m... [more]
XP_006280326.14.300e-4328.88autophagy-related protein 16 [Capsella rubella] >E... [more]
XP_012198889.15.600e-4332.87hypothetical protein SPRG_22135 [Saprolegnia paras... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL126nonsL126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR008ngnoR008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010133NSK010133Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G02170.1NO12G02170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
tipDgene4687Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G02170.1NO12G02170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G02170 ID=NO12G02170|Name=NO12G02170|organism=Nannochloropsis oceanica|type=gene|length=1993bp
ATGGTGGTAGCACCCGCCTCATCCTTGAGGTCCACCTCCATACATTGGAG
GATACACATCTTGCGCCTCCTCCAGCAGCAGAACGAGGAGGAGACGCAGC
CTTTTCGTGGCATCATTCAGAGCTgtaagtgtatgtatcctcggattgcg
ctcttgctccctcccttcgagcaatgagaaccattgacgtgaggctccgt
caatttcccttgttttattcgtgatttcggatgcatcaagtatgactgca
tgccttggagcagtctcttcagctctgcgcaataaaactacctcacaaca
cataatgttcccccatgtccactcacatacctcaacgtcagACACACAAA
TCGCCCGGCAGAACCAGGCCCTTAAACTTCATTTGGAGCACCTAGAAAAG
GAGCTAGTCATTTTGCGACATGGAGCTGCAGAAATCAGCGGGAGCAGTGT
AGGAAGCGGGGCCGGAACGGGGGAAGGTAAGGAGGATCAAGTTCGAAAAC
TGCATCGCAAAGTCCTGCGCCTCCAGGAAGAACTTACGGACAAATTCCGT
CTCGAGGTGCAGGGAACGACGTCTCAGCTGCAAATGAGCAAGGAGATCCA
GGATTTGTTTCAAAAATGTCAAGCGGCGCGGGCGGAGTCTGAGGCTTCAA
AAGCTGAGGTGGAGGGACTGCGGGCGCGGGAGCCGGCATTCGTAGCACAG
GCAGCCATGGCGACAACAGATCTGGAGATCGTGCAAGGCGAGTTAGGCCG
CGCGCGGGCGCGATTAGATGCTGTGGAAAAGGAACGCACGAGGCTACGTG
CCCAGAACGAGGAGTTGATTCAGCGGATAGTAGGGGAGAAGTCGCGCAAT
GCCGATGAAATGAACCGAATGACCGAGCTCGTGGAGCAGATGCGGGTCCA
GCTCAGAGCACAGGGCGTACAGGCCGGAAGTCAGGGGGGTGTAAATAGTC
AGAAAGCGGACTTGGCGATGTCTCTCCAGTCGCCGGGGAGAGATGGACTG
CCTTCGCGGTGCTACCAACAATTTAAGGCACACGCCACGGACGTCAACGA
CGTGGCTTACAATGAGAATGGTGCCTGGCTGGCCACCGCGGGTGGAGACG
GGTATGTTCGTGTGTGGGAAGAAAGGACGGGTCGCCTGAAAACGACATTA
CATGGAGCGGATGTGATGCTGGGGTTGGATTTTCGGGGAGATTTTGTGGT
GGGGGGAAGCAGCGACCACACCTGCAAGCTGTGGAGCCTGGCTTCCGAAC
GCGTGCATCGCACGTTTGTTGGACATTCAGGTAACGTCTATGCAGTAAAA
ATGGTGGCGGGGGATGGGCGTGCAATTCTAACTGGAGGTGCGGACCGAAC
TATCCGCTTGTGGGATGTAGGGAGAGTTAATTGCAAACAGATTTTGCGGT
CGGGCTCGACGTGTAATGGGCTGGATATAGGCATGGATGGCCATGTGCCC
GTCTCAGCGCACCAGGATGGAGGTCTTCGTGTGTGGGATCTACGTGCTGG
AAACCCTAGTATGATTGTGCGGGCATTTGAGACGCAAGCAACCTCGGTGC
AGTATGGGCAGAATTTTACGGTGCTTGCCAACTCTCGTGACAATGTCATT
AAAATCGTTGACACGCGGACGTTTGAGACCCTCCATGTTCTGCGCCATGA
GGATTACCGAACCTTTCTCAACTGGTCCCGGGCTTGTTTCTCCCCTTCTA
GTGCCTACGTAGCTGCAGGATCGGCTAATGGGCAGTTCTTCATCTGGGAT
GCCGTCACAGGTGATGTGAAGTCTACCCTGAATGCCGACGCCATGCCATC
TTTGAGCGGCAGTGGGGGACGGATGGGTATAAGGAACAATTCGTTTTCCA
GCTCGCATGATGGTGGTGGCAGTAGTTCCAGTAGTAGTGCCAGTGGTGTG
GTGGAGAGTGGAAGGGGGATCACAAATTGTGCATGGAAAGGGCAGCAATT
GGCGACGTGCACCAAGGGCGGGGACGTATGTCTGTGGGGATGA
back to top

protein sequence of NO12G02170.1

>NO12G02170.1-protein ID=NO12G02170.1-protein|Name=NO12G02170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=592bp
MVVAPASSLRSTSIHWRIHILRLLQQQNEEETQPFRGIIQSYTQIARQNQ
ALKLHLEHLEKELVILRHGAAEISGSSVGSGAGTGEGKEDQVRKLHRKVL
RLQEELTDKFRLEVQGTTSQLQMSKEIQDLFQKCQAARAESEASKAEVEG
LRAREPAFVAQAAMATTDLEIVQGELGRARARLDAVEKERTRLRAQNEEL
IQRIVGEKSRNADEMNRMTELVEQMRVQLRAQGVQAGSQGGVNSQKADLA
MSLQSPGRDGLPSRCYQQFKAHATDVNDVAYNENGAWLATAGGDGYVRVW
EERTGRLKTTLHGADVMLGLDFRGDFVVGGSSDHTCKLWSLASERVHRTF
VGHSGNVYAVKMVAGDGRAILTGGADRTIRLWDVGRVNCKQILRSGSTCN
GLDIGMDGHVPVSAHQDGGLRVWDLRAGNPSMIVRAFETQATSVQYGQNF
TVLANSRDNVIKIVDTRTFETLHVLRHEDYRTFLNWSRACFSPSSAYVAA
GSANGQFFIWDAVTGDVKSTLNADAMPSLSGSGGRMGIRNNSFSSSHDGG
GSSSSSSASGVVESGRGITNCAWKGQQLATCTKGGDVCLWG*
back to top
Synonyms
Publications