NO12G01450, NO12G01450 (gene) Nannochloropsis oceanica

Overview
NameNO12G01450
Unique NameNO12G01450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3160
Alignment locationchr12:449353..452512 -

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial-processing peptidase subunit beta
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:449353..452512 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003824catalytic activity
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR011249Metalloenz_LuxS/M16
IPR011765Pept_M16_N
IPR007863Peptidase_M16_C
Homology
BLAST of NO12G01450 vs. NCBI_GenBank
Match: GAX97335.1 (mitochondrial-processing peptidase subunit beta [Pythium insidiosum])

HSP 1 Score: 382.5 bits (981), Expect = 1.900e-102
Identity = 212/477 (44.44%), Postives = 298/477 (62.47%), Query Frame = 0
Query:    2 MMRRVG--RAVSSPSI-SSAHSLRRGLASLPGYVTSAPAAVTSRLSNGISVATEAGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKG--------YENEVAKIGGAVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAVLAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLIDFMKGNFTGSRMAVAGTGGVTAEGLAANVGGWSVANGLVGALDGPAV------PSVFTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASGVGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLAWYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLTYGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYNWIRRRSYWLRY 462
            M+ +VG  R + S ++ S A S+   + + P YV +APA   + L+NG+ VA+E    + A + VWI AGSR+E    +GA++ +  +A KG         E E+  +GG + A+TSRE TV  A V K DV  A  +L  ++ N K  +A ++ E+  +L EME V    HE+++ + LH TAF    L + I G  E + NL ++ L D++  ++T  RM VAG G V  E L        +A    G L   +       P+ F GSDVR + D  PLAHVA+ FE   WTS+   PLLV+QT++G WD+ SG G N +S L + VAE ELA S+ AFN  Y+DTGLFGVY VA + KL DL WYT+ AL+++VH+T++EEVE AK QLK+N L  +   +   + +GRQ+LTYGR ++PAE FAR+DA+  A V+  AD+V+ND++H+LA +GP+HELPDYN+IRRRSYWLRY
Sbjct:    1 MLAKVGALRPLQSRAVLSRAQSVAAAVQNYPSYVLNAPATEVTTLANGLRVASEGSHGETATIGVWIGAGSRFEXEKNNGAAHFLEHMAFKGTSKRTQQQLEVEIENMGGHLNAYTSREQTVYYAKVFKKDVPKAMDILSDILQNSKLDEAAIERERDVILREMEEVN-KQHEEVIXDRLHETAFMGQGLGRTILGPIENIKNLKKADLEDYIATHYTAPRMVVAGAGAVDHEQLV------QLAQNAFGDLPTKSTSAPTFEPARFVGSDVRIKDDEMPLAHVAIAFEGFSWTSEHAFPLLVMQTLLGQWDRTSGAGMNMSSKLGQVVAEKELAHSFMAFNTCYQDTGLFGVYAVADQYKLNDLTWYTMEALVRLVHKTSDEEVERAKTQLKANMLMQLDGTSPICEDIGRQLLTYGRRLTPAEIFARIDAVDAAAVRKTADEVINDKEHSLAALGPIHELPDYNFIRRRSYWLRY 470          
BLAST of NO12G01450 vs. NCBI_GenBank
Match: XP_008608265.1 (mitochondrial processing peptidase [Saprolegnia diclina VS20] >EQC38673.1 mitochondrial processing peptidase [Saprolegnia diclina VS20])

HSP 1 Score: 381.7 bits (979), Expect = 3.200e-102
Identity = 213/461 (46.20%), Postives = 286/461 (62.04%), Query Frame = 0
Query:   17 SAHSLRRGLA--SLPGYVTSAPAAVTSRLSNGISVATEAGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKG--------YENEVAKIGGAVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAVLAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLIDFMKGNFTGSRMAVAGTGGVTAEGLAANVGGWSVANGLVGALDGPAVPSV--------FTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASGVGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLAWYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLTYGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYNWIRRRSYWL 460
            S   L RG +  S P YV +APA   + L+NG+ VA+E G  + A V VWI AGSRYE  + +GA++ +  +A KG         E E+  +GG + A+TSRE TV  A V K DV  A  +L  ++ N K  +A ++ E+  +L EME V     E+++F+ LH TAF    L + I GS E V +L +  L D++  ++T  RM VAG G V    L        +A    G L  P  P V        F GSD+R R D  PLAHVA+GFE  GWTS+   PLLV+QT++GSWD+ S  G N +S L + VAE ELA S+ +FN  Y+DTGLFGVY V  + KL DL WY + A++++VH+T++EEVE AK QLK++ L  +   +   + +GRQ L YGR ++PAE FAR+DA+  A V+A ADQVVND++HALA VGP+HELPDYN+IRRRSYWL
Sbjct:    5 SVQRLSRGFSSKSFPAYVLNAPATEVTTLANGLRVASEGGHGETATVGVWIGAGSRYETEANNGAAHFLEHMAFKGTAKRTQQQLEMEIENMGGHLNAYTSREQTVYYAKVFKKDVPQALDILSDILQNSKLDEAAIERERDVILREMEEVN-KQQEEVIFDRLHETAFMGNGLGRTILGSEENVRSLSKGDLQDYIATHYTAPRMVVAGAGAVDHSQLV------DLAQNCFGNL--PTEPRVAPTLETPRFVGSDIRIRDDDMPLAHVAIGFEGYGWTSEHSFPLLVMQTLLGSWDRTSSAGMNMSSKLGQVVAEQELAHSFMSFNTCYQDTGLFGVYAVGDKYKLNDLTWYIMEAMVRLVHKTSDEEVERAKTQLKASILMQLDGSSPVCEDIGRQFLVYGRRLTPAEIFARIDAVDAAAVRATADQVVNDKEHALAAVGPIHELPDYNFIRRRSYWL 456          
BLAST of NO12G01450 vs. NCBI_GenBank
Match: XP_012201539.1 (hypothetical protein SPRG_07363 [Saprolegnia parasitica CBS 223.65] >KDO27764.1 hypothetical protein SPRG_07363 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 379.0 bits (972), Expect = 2.100e-101
Identity = 211/461 (45.77%), Postives = 286/461 (62.04%), Query Frame = 0
Query:   17 SAHSLRRGLA--SLPGYVTSAPAAVTSRLSNGISVATEAGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKG--------YENEVAKIGGAVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAVLAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLIDFMKGNFTGSRMAVAGTGGVTAEGLAANVGGWSVANGLVGALDGPAVPSV--------FTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASGVGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLAWYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLTYGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYNWIRRRSYWL 460
            S   L RG +  S P YV +APA   + L+NG+ VA+E G  + A V VWI AGSRYE  + +GA++ +  +A KG         E E+  +GG + A+TSRE TV  A V K DV  A  +L  ++ N K  +A ++ E+  +L EME V     E+++F+ LH TAF    L + I GS E V +L +  L D++  ++T  RM VAG G V    L        +A    G L  P  P V        F GSD+R R D   LAHVA+GFE  GWTS+   PLLV+QT++GSWD+ S  G N +S L + VAE ELA S+ +FN  Y+DTGLFGVY V  + KL DL WY + A++++VH+T++EEVE AK QLK++ L  +   +   + +GRQ+L YGR ++PAE FAR+DA+  A V+A ADQV+ND++HALA VGP+HELPDYN+IRRRSYWL
Sbjct:    5 SVQRLSRGFSSKSFPAYVLNAPATEVTTLANGLRVASEGGHGETATVGVWIGAGSRYETEANNGAAHFLEHMAFKGTAKRTQQQLEMEIENMGGHLNAYTSREQTVYYAKVFKKDVPQALDILSDILQNSKLDEAAIERERDVILREMEEVN-KQQEEVIFDRLHETAFMGNGLGRTILGSEENVRSLSKGDLQDYIATHYTAPRMVVAGAGAVDHSQLV------DLAQNCFGNL--PTEPRVAPTLETPRFVGSDIRLRDDDMSLAHVAIGFEGYGWTSEHSFPLLVMQTLLGSWDRTSSAGMNMSSKLGQVVAEQELAHSFMSFNTCYQDTGLFGVYAVGDKYKLNDLTWYIMEAMVRLVHKTSDEEVERAKTQLKASILMQLDGSSPVCEDIGRQLLVYGRRLTPAEIFARIDAVDAAAVRATADQVINDKEHALAAVGPIHELPDYNFIRRRSYWL 456          
BLAST of NO12G01450 vs. NCBI_GenBank
Match: XP_008862015.1 (hypothetical protein H310_00858, partial [Aphanomyces invadans] >ETW08210.1 hypothetical protein H310_00858, partial [Aphanomyces invadans])

HSP 1 Score: 377.9 bits (969), Expect = 4.600e-101
Identity = 205/462 (44.37%), Postives = 291/462 (62.99%), Query Frame = 0
Query:   15 ISSAHSLRRGLASLPGYVTSAPAAVTSRLSNGISVATEAGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKG--------YENEVAKIGGAVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAVLAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLIDFMKGNFTGSRMAVAGTGGVTAEGLAANVGGWSVANGLVGALDGPAVPSV---------FTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASGVGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLAWYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLTYGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYNWIRRRSYWL 460
            +S +++ +   +S P YV +APA   + L+NG+ VA+E G  + A V VWI AGSRYE  + +GA++ +  +A KG         E E+  +GG + A+TSRE TV  A V K DV  A  +L  ++ N K  +A ++ E+  +L EME V     E+++F+ LH TAF    L + I GS   V +L +  L D++  ++T  RM +AG G V  + L        +A    G L  P  P V         F GSD+R R D  PLAHVA+GFE+ GWTS+   PLLV+QT++GSWD+ S  G N +S LS+ VAE ELA S+  FN +Y+DTG+FGVY VA + KL DL WY + +L+++VH+T+++EVE AK QLK++ L  +   +   + +GRQ+L YGR ++PAE FAR+DA+  A V+ VAD V+ND++HALA VGP+HELPDYN+IRRRSYW+
Sbjct:   33 LSRSYASKAAPSSFPAYVLNAPATEVTTLANGLRVASEGGHGETATVGVWIGAGSRYETEANNGAAHFLEHMAFKGTAKRTQQQLEVEIENMGGHLNAYTSREQTVYYAKVFKKDVPQALDILSDILQNSKLDEAAIERERDVILREMEEVN-KQQEEVIFDRLHETAFLGNGLGRTILGSEANVRSLTKGDLQDYIATHYTAPRMVIAGAGAVDHQQLV------DLAQHSFGNL--PTEPRVPVPEFGPVKFVGSDIRIRDDDLPLAHVAIGFESYGWTSENSFPLLVMQTLLGSWDRTSSAGLNASSKLSQVVAEQELAHSFMTFNTSYQDTGIFGVYAVADKYKLNDLTWYVMESLVRLVHKTSDDEVERAKTQLKASILMQLDGSSAVAEDIGRQLLVYGRRLTPAEIFARIDAVDAAAVRKVADDVINDKEHALAAVGPIHELPDYNFIRRRSYWV 485          
BLAST of NO12G01450 vs. NCBI_GenBank
Match: XP_009829539.1 (hypothetical protein H257_06124 [Aphanomyces astaci] >ETV80592.1 hypothetical protein H257_06124 [Aphanomyces astaci])

HSP 1 Score: 375.2 bits (962), Expect = 3.000e-100
Identity = 208/467 (44.54%), Postives = 295/467 (63.17%), Query Frame = 0
Query:    3 MRRVGRAVSSPSISSAHSLRRGLASLPGYVTSAPAAVTSRLSNGISVATEAGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKG--------YENEVAKIGGAVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAVLAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLIDFMKGNFTGSRMAVAGTGGVTAEGLAANVGGWSVAN-GLVGALDGPAV-PSVFTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASGVGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLAWYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLTYGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYNWIRRRSYWL 460
            ++R+ R+ +S +  S        +S P YV +APA   + L+NG+ VA+E G  + A V VWI AGSRYE  + +GA++ +  +A KG         E E+  +GG + A+TSRE TV  A V K DV  A  +L  ++ N K  +A ++ E+  +L EME V     E+++F+ LH TAF    L + I GS   V +L +  L D++  ++T  RM +AG G V  + L  ++   S  N      +  PA  P  F GSD+R R D  PLAHVA+GFE+ GWTS+   PLLV+QT++GSWD+ S  G N +S LS+ VAE ELA S+  FN +Y+DTG+FGVY VA + KL DL WY + AL+++VH+TT++EVE AK QLK++ L  +   +   + +GRQ+L YGR ++PAE FAR+DA+  A V+  AD V+ND++HALA VGP+HELPDYN+IRRRSYW+
Sbjct:    6 IQRLSRSYASKAAPS--------SSFPAYVLNAPATEVTTLANGLRVASEGGHGETATVGVWIGAGSRYETEANNGAAHFLEHMAFKGTAKRTQQQLEVEIENMGGHLNAYTSREQTVYYAKVFKKDVPQALDILSDILQNSKLDEAAIERERDVILREMEEVN-KQQEEVIFDRLHETAFLGNGLGRTILGSEANVRSLSKGDLQDYIATHYTAPRMVIAGAGAVDHQQL-VDLAQHSFGNLPTEPRVPVPAFEPVKFVGSDIRIRDDDLPLAHVAIGFESYGWTSENSFPLLVMQTLLGSWDRTSSAGLNASSKLSQVVAEQELAHSFMTFNTSYQDTGIFGVYAVADKYKLNDLTWYVMEALVRLVHKTTDDEVERAKTQLKASILMQLDGSSPVCEDIGRQLLVYGRRLTPAEIFARIDAVDAAAVRKTADDVINDKEHALAAVGPIHELPDYNFIRRRSYWV 462          
BLAST of NO12G01450 vs. NCBI_GenBank
Match: GAX16784.1 (mitochondrial-processing peptidase subunit alpha [Fistulifera solaris])

HSP 1 Score: 373.2 bits (957), Expect = 1.100e-99
Identity = 201/465 (43.23%), Postives = 288/465 (61.94%), Query Frame = 0
Query:    8 RAVSSPSISSAHSLRRGLASLPGYVTSAPAAVTSRLSNGISVATE-AGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKG--------YENEVAKIGGAVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAVLAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLIDFMKGNFTGSRMAVAGTGGVTAEGLA--ANVGGWSVANGLVGALDGPAVPSVFTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASGVGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLAWYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLTYGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYNWIRRRSYWLRY 462
            R +    +SSA ++       P YV  AP    + L +G+ VA+E     + A V VWI+AGSRYE  + +G ++ +  L+ KG         E E+  +GG + A+TSRE TV  A V K D+  A  +L  ++ N K  D  ++ E+  +L EM  +     E+L+ +HLHATA+Q T L + I G  E + +L R  L+D+++ ++T  RM +A  G V    L   A+    +V     G LD P  P++FTGSD   +F+S   AH+AL +ETA WTS+   PLL++Q ++GS+D+  G+G+N  S L + VAENELA SY AFN  YKDTGLFG+Y V P+NK++D+ W  ++ L+++VH  ++EEVE AK  LK+  L+ +   A   + +GRQ+LTYGR M+PAE F+R+DA+ V D+KA A + +NDQDHALA VG +HELPDYNWIR  SYWLRY
Sbjct:   13 RTIQRARVSSA-AVAASTPQFPDYVLRAPTTDVTTLDSGLRVASETVQGSETATVGVWIDAGSRYETAANNGVAHFLEHLSFKGTSKRTQQQLEVEIENMGGHLNAYTSREQTVYFAKVFKNDLKKAVEILSDILLNSKLDDGAIERERDVILREMSEIN-KQQEELVLDHLHATAYQGTGLGRTILGPEENIRSLTRKDLVDYIQQHYTAPRMVIAAAGAVQHTELCDLASQYFGNVPTVPAGGLDVPMDPAIFTGSDYLVKFNSDDTAHIALAYETASWTSEYAFPLLLMQGMLGSYDRTQGLGRNHASRLGQEVAENELAHSYAAFNSCYKDTGLFGLYMVCPDNKVDDMMWTVMNNLVRLVHSPSDEEVERAKLNLKATMLAGLDGHANTAEDIGRQLLTYGRRMTPAEIFSRIDAVTVDDIKATAAKFINDQDHALAAVGGIHELPDYNWIRSHSYWLRY 475          
BLAST of NO12G01450 vs. NCBI_GenBank
Match: GBG27027.1 (Mitochondrial-processing peptidase subunit beta [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 369.4 bits (947), Expect = 1.600e-98
Identity = 201/460 (43.70%), Postives = 284/460 (61.74%), Query Frame = 0
Query:   22 RRGLA--------SLPGYVTSAPAAVTSRLSNGISVATEAGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKGYEN--------EVAKIGGAVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAVLAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLIDFMKGNFTGSRMAVAGTGGVTAEGLA----ANVGGWSV--ANGLVGALDGPAVPSVFTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASGVGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLAWYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLTYGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYNWIRRRSYWL 460
            RRGLA        + P Y+  APA   S L NG+ VA+E G  D A V VWI+AGSRYE    +G ++ +  +A KG  N        E+  +GG + A+TSRE TV  A V K D+  A  +L  ++ N  F  A +D E+  ++ EME V  +  E+++F+ LH TA+  T L + I G  E + ++ R  L  +++ ++T  RM VAG G V  + L+       GG      N +  A++    P+ FTGS++R R DS PLAH+AL FE+AGW S+   PL+V+QT++G W + SG+G NG S L +++AENE A S  +FN  YKDTGLFGVY VA    + DL ++TL +++++ H TTEEEV  A+ QLK+  L+ +   +   + +GR MLTYGR +SPAE FAR+DA+  A VK  A++ +NDQD A+A +GPLHELPDYNW+RRR+YWL
Sbjct:   10 RRGLATAAAASANAFPEYILKAPATEVSTLGNGLRVASEGGHGDTATVGVWIDAGSRYETAKNNGVAHFLEHMAFKGTSNRTQTQLEMEIENMGGHLNAYTSREQTVYYAKVFKDDIPKAMEILSDILQNATFDPAAIDRERDVIMREMEEVEKE-QEEVVFDRLHETAYMGTGLGRTILGPTENIMSISRDDLRSYIETHYTAPRMVVAGAGAVDHQQLSELSEKYFGGLPTESPNAVAAAME----PARFTGSEIRIRQDSEPLAHIALAFESAGWASEHAYPLMVMQTMLGCWSRTSGLGANGGSKLCQSIAENECAHSIMSFNSCYKDTGLFGVYAVAEPTSVNDLMFHTLESMVRLCHHTTEEEVARARTQLKATMLAHLDGSSQVCEDIGRSMLTYGRRLSPAEIFARIDAVDAAAVKTAANKFINDQDVAMAAIGPLHELPDYNWLRRRTYWL 464          
BLAST of NO12G01450 vs. NCBI_GenBank
Match: GAX10525.1 (mitochondrial-processing peptidase subunit alpha [Fistulifera solaris])

HSP 1 Score: 364.8 bits (935), Expect = 4.000e-97
Identity = 200/466 (42.92%), Postives = 289/466 (62.02%), Query Frame = 0
Query:    8 RAVSSPSISSAHSLRRGLASLPGYVTSAPAAVTSRLSNGISVATE-AGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKG--------YENEVAKIGGAVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAVLAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLIDFMKGNFTGSRMAVAGTGGVT-AE--GLAANVGGWSVANGLVGALDGPAVPSVFTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASGVGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLAWYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLTYGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYNWIRRRSYWLRY 462
            R +    +SSA ++       P YV  AP    + L +G+ VA+E     + A V VWI+AGSRYE  + +G ++ +  L+ KG         E E+  +GG + A+TSRE TV  A V K D+  A  +L  ++ + K  +  ++ E+  +L EM  +     E+L+ +HLHATA+Q T L + I G  E + +L R  L+D+++ ++T  RM +A  G V  AE   LA+   G +V     G L     P++FTGSD   +F+S   AH+AL +ETA WTS+   PLL++Q ++GS+D+  G+G+N  S L + VAENELA SY AFN  YKDTGLFG+Y V P+NK++D+ W  ++ L+++VH  ++EEVE AK  LK+  L+ +   A   + +GRQ+LTYGR M+PAE F+R+DA+ V D+KA A + +NDQDHALA VG +HELPDYNWIR  SYWLRY
Sbjct:   13 RTIQRARVSSA-AVAASTPQFPDYVLRAPTTDVTTLDSGLRVASETVQGSETATVGVWIDAGSRYETAANNGVAHFLEHLSFKGTSKRTQQQLEVEIENMGGHLNAYTSREQTVYFAKVFKNDLKKAVEILSDILLHSKLDEGAIERERDVILREMSEIN-KQQEELVLDHLHATAYQGTGLGRTILGPEENIRSLTRKDLVDYIQQHYTAPRMVIAAAGAVQHAELCDLASEYFG-NVPTVPAGGLGVAMDPAIFTGSDYLVKFNSEDTAHIALAYETASWTSEYAFPLLLMQGMLGSYDRTQGLGRNHASRLGQEVAENELAHSYAAFNSCYKDTGLFGLYMVCPDNKVDDMMWTVMNNLVRLVHSPSDEEVERAKLNLKATMLAGLDGHANTAEDIGRQLLTYGRRMTPAEIFSRIDAVTVDDIKATAAKFINDQDHALAAVGGIHELPDYNWIRSHSYWLRY 475          
BLAST of NO12G01450 vs. NCBI_GenBank
Match: XP_002180975.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47627.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 363.6 bits (932), Expect = 9.000e-97
Identity = 197/458 (43.01%), Postives = 285/458 (62.23%), Query Frame = 0
Query:   16 SSAHSLRRGLASLPGYVTSAPAAVTSRLSNGISVATE-AGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKGYEN--------EVAKIGGAVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAVLAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLIDFMKGNFTGSRMAVAGTGGVTAE---GLAANVGGWSVANGLVGALDGPAVPSVFTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASGVGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLAWYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLTYGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYNWIRRRSYWLRY 462
            SS  +L    A+ P YV  AP    + L +G+ VA+E     + A V VWI+AGSRYE    +G ++ +  LA KG E         E+  +GG + A+TSRE TV  A V K DV  A  +L  ++ + K  +A +D E+  +L EM  V     E+L+ +HLHATAFQ T L + I G  E + +L R+ L+D+++ ++T  RM +AG G +  +   GLA+   G  +       L+    P++FTGSD   +F+S   AH+A+ FE A WTS+   PL+++Q ++GS+++  G+G+N  S L + VAE+ELA S +AFN  YKD GLFGVY VAP+ K++DL W+ ++ L+++VH  +EEEVE AK  LK+  L  +   A   + +GRQ+LTYGR M+PAE F+R+DA+   D++A A + +NDQDHALA VG +HELPDY W+RR SYWLRY
Sbjct:   18 SSRCALSTATAAFPDYVLRAPTTDVTTLDSGLRVASETVQGSETATVGVWIDAGSRYETARNNGVAHFLEHLAFKGTEQRTQPQLELEIENMGGHLNAYTSREQTVYFAKVFKDDVGKAVEILSDILLHSKLDEAAIDRERDVILREMAEVN-KQQEELVLDHLHATAFQGTGLGRTILGPEENIRSLSRTDLVDYIQQHYTAPRMVIAGAGAIDHDQLCGLASQHFG-ELPTAPKDGLELAMEPAIFTGSDYLVKFNSDDTAHIAIAFEAASWTSEYAFPLMLMQIMLGSYNRTQGLGRNHASRLCQEVAEHELAHSVSAFNTCYKDIGLFGVYMVAPDKKVDDLMWHVMNNLVRLVHTPSEEEVERAKLNLKAIMLMGLDGHANVAEDIGRQLLTYGRRMTPAEIFSRIDAVTKDDIRATAAKFINDQDHALAAVGGIHELPDYTWVRRHSYWLRY 473          
BLAST of NO12G01450 vs. NCBI_GenBank
Match: CCI44798.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 349.4 bits (895), Expect = 1.800e-92
Identity = 194/467 (41.54%), Postives = 279/467 (59.74%), Query Frame = 0
Query:    8 RAVSSPSIS---SAHSLRRGLASLPGYVTSAPAAVTSRLSNGISVATEAGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKG--------YENEVAKIGGAVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAVLAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLIDFMKGNFTGSRMAVAGTGGVTAEGLAANVGGWSVANGLVGALDGPAV---PSVFTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASGVGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLAWYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLTYGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYNWIRRRSYWLR 461
            R + SP  S   +  ++ + +   P YV +APA   + L +G+ VA+E    + A V VWI AGSRYE    +GA++ +  +A KG         E E+  +GG + A+TSRE TV  A V K D+  A  +L  ++ N +  +  +  E+  +L EME V    HE+++F+ LH TA+    L + I G  E + +L +  L D++  ++T  RM +AG G +  + L   +   S  N      +  A+   P+ F GSD+R   DS  L HVAL FE   WTS+   PLL++QT+IGSWD+  G G N +S L + VAE+EL  SY+AFN  Y DTGLFGVY VA  +KL D  WYTL +L+++VH+TTEEEVE AK QLK++ L  +   +   + +GRQ+LTYGR ++PAE F R+D +    V+  A QV+ND+ HALA VGP+ ELPDY +IR+RSYW++
Sbjct:    3 RKLCSPKFSTYAANATVSQAVHRFPSYVINAPATEVTTLPSGLRVASEGSHGETATVGVWIGAGSRYETEKNNGAAHFLEHMAFKGTCRRTQQQLEMEIENMGGHLNAYTSREQTVYYAKVFKKDIPRALDILSDILQNSRLDEIAIARERDVILREMEEVN-KQHEEVVFDRLHETAYMGNGLGRTILGPQENIRSLSKQDLRDYIATHYTADRMVIAGAGAIDHQEL-VQLAEKSFGNLPTTPSNSQAIKLDPARFIGSDIRVPNDSESLVHVALAFEGFSWTSEYAFPLLIMQTLIGSWDRTDGAGLNSSSKLGQAVAEHELVHSYSAFNTCYHDTGLFGVYAVADPHKLNDFMWYTLESLVRLVHKTTEEEVERAKIQLKASMLMQLDGSSPICEDIGRQLLTYGRRLTPAEIFMRIDTVDATSVRRTATQVINDKAHALAAVGPVQELPDYAFIRKRSYWVK 467          
The following BLAST results are available for this feature:
BLAST of NO12G01450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX97335.11.900e-10244.44mitochondrial-processing peptidase subunit beta [P... [more]
XP_008608265.13.200e-10246.20mitochondrial processing peptidase [Saprolegnia di... [more]
XP_012201539.12.100e-10145.77hypothetical protein SPRG_07363 [Saprolegnia paras... [more]
XP_008862015.14.600e-10144.37hypothetical protein H310_00858, partial [Aphanomy... [more]
XP_009829539.13.000e-10044.54hypothetical protein H257_06124 [Aphanomyces astac... [more]
GAX16784.11.100e-9943.23mitochondrial-processing peptidase subunit alpha [... [more]
GBG27027.11.600e-9843.70Mitochondrial-processing peptidase subunit beta [A... [more]
GAX10525.14.000e-9742.92mitochondrial-processing peptidase subunit alpha [... [more]
XP_002180975.19.000e-9743.01predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CCI44798.11.800e-9241.54unnamed protein product [Albugo candida][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010068NSK010068Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01450.1NO12G01450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592072gene_5305Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100054g10gene4636Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01450.1NO12G01450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01450 ID=NO12G01450|Name=NO12G01450|organism=Nannochloropsis oceanica|type=gene|length=3160bp
TTCTCTATGTAGGTATTCTTAAACCTATTCTGTACATAGACACTTGCAAA
AAGGAGCAAGTAACCCAAGCGCCCCCGCGCCAAAAATGGGTTGGATTCCA
TCATCATCATATAAGTGTCTGCCCTCTATGCTATGTTTCTACACCCGATA
TGCGGTCGCTTCCCCGCGCATGCACAGACGAAAAGAGAGATATTCCGATG
AAGTTTGTAGGACAGCGTCGCTTGCCGTGCCTTCAGCACTATCCAACGCC
AAATCCCCTAGCTGCTTGCTGCCGCTGCCGTGAATTGACGATGATCATCG
AGAAGCCAAGCCTCCGTCTTGCATACTATAGCTATTGTCCGCATCTCTCG
CGTGCTCTTACCCACAGACAATACCCTTACCATTACATCCCGTAGGGCAT
TCGTCATCGTTTGAGTAGCGCACACAGGCCACCGCACAACCAGACCAACC
ATGATGATGCGACGCGTCGGACGGgtaagtaatcttgcgattacaacgag
agggactagagtatttgcgccttatttgtttgtttgtctgtgcttgccct
ggttattttcaacgcagtaaagatgctaagccatgtttaatgatccggga
tgatgtcagagcatcctctgagcatctcagtgcggagcgctgtttgaagg
tgtggagagtggggtgcccgcacagcggatgatgttgccacgacaacttt
ctacgtagccttcttccaagcccgaacgcggtagtttacaagtctttctc
atctttcatcgaactcctcccactcgcacactcaacctttttcaaaccta
cagGCGGTCTCTTCGCCTTCCATCTCCTCCGCCCACTCCCTCCGCCGTGG
TCTGGCTTCCCTGCCGGGGTACGTCACGTCCGCACCCGCCGCCGTCACCA
GCAGGCTCAGTAATGGTATTTCTGTCGCCACGGAGGCGGGACCAGATGAT
TTGGCTGTGGTCTCGGTGTGGATTGAGGCTGGGAGCCGTTACGAGGCCCC
GAGTCTGTCGGGGGCGTCGAATTTGATTGCTCGGCTGGCCTTGAAGGGTT
ATGAGAATGAAGTGGCCAAGATCGGGGGGGCTGTGAAAGCGTGGACATCG
CGTGAGATGACCGTGGTTTCGGCCAGCGTGCTGAAGGCGGACGTGGCGGC
AGCGACGACGTTGTTGGGGCAGGTGGTAACGAACCCGAAGTTTGGGGACG
CAGACGTGGATGCGGAGAAGGCAGCGGTGCTTGCGGAGATGGAGAGTGTA
ACGGTCGACGCGCATGAGCAGTTGTTGTTCGAACATTTGCATGCTACGGC
GTTTCAGgttgtttcttcactcactctcctgttcctccctcgttccctcc
cacctgcctattcctttccatccgtccaatccccctcatcctggatcttt
cgttgactcacgttgtaactcctatccactttcagGACACACCCCTCGCG
CAACCGATTGCTGGATCCCCGGAAACTGTGGCCAATCTACACAGGTCCTC
CCTTATTGATTTTATGAAAGGCAACTTCACCGGCAGCCGTATGGCCGTGG
CAGGGACGGGCGGCGTTACGGCGGAGGGGCTGGCAGCAAATGTGGGCGGT
TGGTCGGTGGCGAATGGACTAGTGGGGGCTTTGGATGGCCCGGCAGTGCC
GAGTGTATTTACAGGCTCGGACGTAAGGGCGCGGTTCGACTCGTATCCGg
taagtcagggagggagggagagagggagggagtggagaagaaagttagtg
tgatgaatgtacttaccttgcttcttttgctctccttgacaatgatgaca
gCTGGCGCACGTCGCACTCGGGTTCGAGACGGCCGGTTGGACGAGCAAGA
TGCAGATCCCCTTGCTGGTGGTGCAGACGATCATAGGGAGCTGGGACAAG
GCCTCGGGGGTGGGAAAGAATGGCACCTCTGCTCTTTCGCGCAATGTTGC
GGAGAACGAGCTGGCTACTTCTTACACGGCATTTAATCTCGCCTACAAGg
tacttgtctgatccagtgattaagtctgagaatggaacgagatgcttgtc
tgtaggcgggcgcgcttgtattgattcttggcgcgagttattgccttctt
caatgtttattcctttgcctttgatgggacaaagggaggggagaaaggtc
tgaaatcaggatagatatgactaagggaccgctgtgatgagatatagagc
ataaaccaaatggtatttcatcgttctgactcggcgcgtggctccgtcca
ggcgcagtgaggagaaatgttctccatcgactgagcaatcccccttcaaa
ccctccctcaagcccttcctgtccccaaactcaacatctagcattcctat
ccctccattgttcgcaacattttccccccttccccattgtgactgtggtt
ctgatgctttttctcctccctccctccctccctctctatagGATACCGGC
CTCTTCGGCGTCTACTTTGTGGCGCCCGAGAACAAGCTGGAGGACCTGGC
CTGGTACACCCTCCACGCCCTGTTGAAGGTCGTGCACCAAACAACCGAAG
AGGAGGTGGAGTATGCCAAGGCGCAACTGAAATCGAACTACCTTTCTTCC
ATCTCCTCCATTGCCGGGGCGAACGACAGCTTGGGAAGGCAGATGCTGAC
TTATGGTCGCGTGATGTCCCCGGCTGAGTTTTTTGCCCGTGTAGATGCCT
TAGGAGTGGCGGACGTGAAGGCTGTTGCTGATCAGGTGGTGAATGACCAG
GATCATGCCCTTGCTGGGGTGGGGCCTTTGCATGAGCTGCCGGATTACAA
CTGGATCCGACGCCGTTCGTACTGGTTGCGGTATTAGGCAGACGAGAAGG
AGATGGGAAAATGATCAGGAAGGAACAGCAGGAGAGCGATGATGAAGATT
ATGATAAGGGTTTTTGGATGAGGGAAGGTGGGTTGGTGGAGGGGGGAGGG
GAGGGAGGCAGGGGATAATTGTCGGAGAGAGTATTTCTTGGACAAGCCGG
GCGCGGCTTCAAGGGGGGAGAGGAATAAATAGTCTCGCACCCACAAACAT
TTATTCGAACTACCAAGAAAGAAGAAAACGACGAGAGACATGAGGATGAA
ATTGACGCCGTTGAGTGTTTTTGGTAAAGGAAGAAAGACGTGCTTTGGTA
CAAATTCAGC
back to top

protein sequence of NO12G01450.1

>NO12G01450.1-protein ID=NO12G01450.1-protein|Name=NO12G01450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MMMRRVGRAVSSPSISSAHSLRRGLASLPGYVTSAPAAVTSRLSNGISVA
TEAGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKGYENEVAKIGG
AVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAV
LAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLI
DFMKGNFTGSRMAVAGTGGVTAEGLAANVGGWSVANGLVGALDGPAVPSV
FTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASG
VGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLA
WYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLT
YGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYN
WIRRRSYWLRY*
back to top
Synonyms
Publications