NO12G01270, NO12G01270 (gene) Nannochloropsis oceanica

Overview
NameNO12G01270
Unique NameNO12G01270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1522
Alignment locationchr12:399689..401210 -

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Properties
Property NameValue
Descriptionhigh-affinity nickel-transport family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:399689..401210 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
[Close]
BLAST of NO12G01270 vs. NCBI_GenBank
Match: EWM25911.1 (hypothetical protein Naga_100048g26 [Nannochloropsis gaditana])

HSP 1 Score: 337.4 bits (864), Expect = 6.500e-89
Identity = 226/434 (52.07%), Postives = 258/434 (59.45%), Query Frame = 0 
Query:    3 AISPEEAGKLIVTGLTFGCIHVLTGADHLSALATLSVGSRWKAFGLGIRWGLGHSTGLILVAAILLGLGDRIDPKVLEHACSWIVGVFMILLGAWGILKARKHEMVRQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARIGVAEAAEISPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEEMGVELMPPHHFNSSAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGINDRHSNDKNTSRSKQSLSSSCAITNTSSTTGISSSPPQHRRGIAEATEPFLERECNEGYHGFLVRLRQCLRVDLESHAVQRIVAFSVGIVHGIAGPGGVLGVLPAARLHSWPKASLYLATFCLSSTLIMGIFAALYGECTSRLGSARNIEYKLELFSASLSIIVGVLWMAMILAGKLDVVF 437
            A+SP EAGKLI TGL FGCIHVL+GADHLSALATL+VGSR+KAFGLGIRWGLGHS+GLILVA I+LGLGD+IDPKVLEH CSWIVGVFMI LG WGI KAR++E +R  A                                    +    A A   SP            XXXXXXXXXXXXXXXXXX      +EL+P         +                                             R  ND+  +         C +    ++     SP +       A+EPFLE +          R   CLRVDLES  VQR+VAF VGIVHGIAGPGGVLGVLPAARLHSWPKA++YLATFCLSSTLIMGIFAALYGECTSRLG+ARNIE++LE+FSASLS+IVGVLWM++ILAGKLD VF
Sbjct:    9 AVSPAEAGKLIATGLAFGCIHVLSGADHLSALATLAVGSRFKAFGLGIRWGLGHSSGLILVALIILGLGDKIDPKVLEHTCSWIVGVFMIALGVWGIYKARRNEAIRNAAATMEGKETRGRSSLRGVEGMEEGRDPASEYGNAQDTSDGTHALAQSESP-----------PXXXXXXXXXXXXXXXXXXXXXXXXLELVPTSQAKREGSRSEGGDGKEDCG--------------------------------GSRRVNDETDAIDCAHEEQPCGMQEQDAS---EKSPERD----MSASEPFLEEDQGRRRQSLPKRCLACLRVDLESPTVQRVVAFGVGIVHGIAGPGGVLGVLPAARLHSWPKATIYLATFCLSSTLIMGIFAALYGECTSRLGAARNIEFRLEIFSASLSLIVGVLWMSLILAGKLDSVF 392
[Close]
BLAST of NO12G01270 vs. NCBI_GenBank
Match: XP_009839707.1 (hypothetical protein H257_13758 [Aphanomyces astaci] >ETV70642.1 hypothetical protein H257_13758 [Aphanomyces astaci])

HSP 1 Score: 174.1 bits (440), Expect = 9.600e-40
Identity = 133/432 (30.79%), Postives = 183/432 (42.36%), Query Frame = 0 
Query:   10 GKLIVTGLTFGCIHVLTGADHLSALATLSVGSRWKAFGLGIRWGLGHSTGLILVAAILLGLGDRIDPKVLEHACSWIVGVFMILLGAWGILKARK--HEMVRQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARIGVAEAAEISPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEEMGVELMPPHHFNSSAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGINDRHSNDKNTSRSKQSLSSSCAITNTSSTTGISSSPPQHRRGIAEATEPFLERECNEGYHGFLVRLRQCL-RVDLESHAVQRIVAFSVGIVHGIAGPGGVLGVLPAARLHSWPKASLYLATFCLSSTLIMGIFAALYGECTSRLGSARN-IEYKLELFSASLSIIVGVLWMAMILAGKLDVVFG 438
            GKL+ T L FG  HVL+G DHLSALATLS GS W++F LG+RWG GHS GLI++A I + L D ++ + L+     +VGVFMI LG +GI  A K  H+   Q                                             +++ S L S                              +   E  P     SS  K                                                ND +      +L  +                            P  +   N   H +  R R+C+ RV++++   Q+  A  VGI+HGIAGPGG+LGV+PA R H+W ++ +YL TFCL+S +IMG+FAALYGE TSRLG     I +++ +FSA LSI VG+LW+ ++  GK+  VFG
Sbjct:   14 GKLVATALGFGVFHVLSGPDHLSALATLSAGSSWRSFALGVRWGCGHSIGLIIMALIFILLDDSLNLEKLDIVTEVVVGVFMIALGVYGIYSAHKKFHDPDHQGHAHGGTPSTCTCKQRPYEEVPCRLS---------------STGRSSDASDLPS------------------------ASSPPTDPSSEQSPSPSVKSSQTKLIPAVQVDDASVSSF---------------------------------NDNSEVSDADTLEIAXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLAKGRSNA--HDYRRRWRRCVPRVNMDNPTTQKATALIVGIIHGIAGPGGILGVMPAVRYHNWLRSMVYLGTFCLTSIIIMGLFAALYGELTSRLGQRSTIIAFRINVFSAVLSIGVGILWITLVALGKMKAVFG 371
[Close]
BLAST of NO12G01270 vs. NCBI_GenBank
Match: XP_009839706.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV70643.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 174.1 bits (440), Expect = 9.600e-40
Identity = 133/432 (30.79%), Postives = 183/432 (42.36%), Query Frame = 0 
Query:   10 GKLIVTGLTFGCIHVLTGADHLSALATLSVGSRWKAFGLGIRWGLGHSTGLILVAAILLGLGDRIDPKVLEHACSWIVGVFMILLGAWGILKARK--HEMVRQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARIGVAEAAEISPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEEMGVELMPPHHFNSSAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGINDRHSNDKNTSRSKQSLSSSCAITNTSSTTGISSSPPQHRRGIAEATEPFLERECNEGYHGFLVRLRQCL-RVDLESHAVQRIVAFSVGIVHGIAGPGGVLGVLPAARLHSWPKASLYLATFCLSSTLIMGIFAALYGECTSRLGSARN-IEYKLELFSASLSIIVGVLWMAMILAGKLDVVFG 438
            GKL+ T L FG  HVL+G DHLSALATLS GS W++F LG+RWG GHS GLI++A I + L D ++ + L+     +VGVFMI LG +GI  A K  H+   Q                                             +++ S L S                              +   E  P     SS  K                                                ND +      +L  +                            P  +   N   H +  R R+C+ RV++++   Q+  A  VGI+HGIAGPGG+LGV+PA R H+W ++ +YL TFCL+S +IMG+FAALYGE TSRLG     I +++ +FSA LSI VG+LW+ ++  GK+  VFG
Sbjct:   14 GKLVATALGFGVFHVLSGPDHLSALATLSAGSSWRSFALGVRWGCGHSIGLIIMALIFILLDDSLNLEKLDIVTEVVVGVFMIALGVYGIYSAHKKFHDPDHQGHAHGGTPSTCTCKQRPYEEVPCRLS---------------STGRSSDASDLPS------------------------ASSPPTDPSSEQSPSPSVKSSQTKLIPAVQVDDASVSSF---------------------------------NDNSEVSDADTLEIAXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLAKGRSNA--HDYRRRWRRCVPRVNMDNPTTQKATALIVGIIHGIAGPGGILGVMPAVRYHNWLRSMVYLGTFCLTSIIIMGLFAALYGELTSRLGQRSTIIAFRINVFSAVLSIGVGILWITLVALGKMKAVFG 371
[Close]
BLAST of NO12G01270 vs. NCBI_GenBank
Match: XP_009536036.1 (hypothetical protein PHYSODRAFT_527679 [Phytophthora sojae] >EGZ07864.1 hypothetical protein PHYSODRAFT_527679 [Phytophthora sojae])

HSP 1 Score: 167.2 bits (422), Expect = 1.200e-37
Identity = 132/437 (30.21%), Postives = 184/437 (42.11%), Query Frame = 0 
Query:    2 TAISPEEAGKLIVTGLTFGCIHVLTGADHLSALATLSVGSRWKAFGLGIRWGLGHSTGLILVAAILLGLGDRIDPKVLEHACSWIVGVFMILLGAWGILKARKHEMVRQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARIGVAEAAEISPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEEMGVELMPPHHFNSSAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGINDRHSNDKNTSRSKQSLSSSCAITNTSSTTGISSSPPQHRRGIAEATEPFLERECNEGYHGFLVRLRQCLRVDLESHAVQRIVAFSVGIVHGIAGPGGVLGVLPAARLHSWPKASLYLATFCLSSTLIMGIFAALYGECTSRL-GSARNIEYKLELFSASLSIIVGVLWMAMILAGKLDVVFG 438
            +++S    GK+I TGL  G +HVLTG DHLSALA ++ GS W+AF LGIRWG GHS GL+++A I    G  +D   +    +++VG FMI LG W  +  RK    + K                                     A  G AE+   S   +                                 VELMP                                                    ++ R  +  + S S   L      ++ +  TG + SP    R  A    P          H +      C  V  E+ A Q+I+A  VGI+HG AGPGG+LGVLPA  L+ W K+  YL +FC++S  IMG+FAALYGE T RL G++  +E+++ +FSA  S IVGV W+ +  +G++D V G
Sbjct:   13 SSLSGASLGKIISTGLLLGVVHVLTGPDHLSALAAMTTGSSWRAFALGIRWGCGHSIGLVVMALIFFAAGQTVDLDAVGGYLNYVVGFFMIALGIWTAVHVRKKYQTQLK-----------------------------EGVQSLVSAEGGRAESNRASRSSTGATPTNL--------------------------VELMP----------------------------------------------------LSQRIVSIASPSSSFHLLIKEDGASSAADATGTAVSP----REKASKLHP----------HSW----NCCRSVSFENPATQKIMALLVGIIHGFAGPGGILGVLPAVVLNDWVKSVAYLGSFCVASIFIMGVFAALYGEVTGRLGGNSLVMEFRIGIFSAFFSFIVGVAWIGLQASGQMDAVLG 324
[Close]
BLAST of NO12G01270 vs. NCBI_GenBank
Match: XP_008881082.1 (hypothetical protein H310_14896 [Aphanomyces invadans] >ETV90297.1 hypothetical protein H310_14896 [Aphanomyces invadans])

HSP 1 Score: 166.8 bits (421), Expect = 1.500e-37
Identity = 138/435 (31.72%), Postives = 198/435 (45.52%), Query Frame = 0 
Query:   10 GKLIVTGLTFGCIHVLTGADHLSALATLSVGSRWKAFGLGIRWGLGHSTGLILVAAILLGLGDRIDPKVLEHACSWIVGVFMILLGAWGILKARK-----HEMVRQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARIGVAEAAEISPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEEMGVELMPPHHFNSSAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGINDRHSNDKNTSRSKQSLSSSCAITNTSSTTGISSSPPQHRRGIAEATEPFLERECNEGYHGFLVRLRQCL-RVDLESHAVQRIVAFSVGIVHGIAGPGGVLGVLPAARLHSWPKASLYLATFCLSSTLIMGIFAALYGECTSRLGS-ARNIEYKLELFSASLSIIVGVLWMAMILAGKLDVVFG 438
            GKL+ T L FG  HV++G DHLSALATLS GS W++F LG+RWG GHS GLI++A I + L D ++ + L+     +VGVFMI LG  G+  A K     H++                                               ++A  S  +S              XXXXXXXXXXXX   + + ++   P H +  +                                            +++  S+                    ++  G S +  +  RG                      R R+C+ +VD+E+   Q+  A  VGIVHGIAGPGG+LGV+PA R H+W ++ +YL TFC +S +IMG+FAA+YGE TSRLG  +  + Y++ +FSA LSI VG+LW+ ++  GK+  VFG
Sbjct:   14 GKLVATALGFGVFHVMSGPDHLSALATLSAGSSWRSFALGVRWGCGHSIGLIIMAFIFILLDDSLNLEKLDIVTEVVVGVFMIGLGVHGVYNANKKLGDPHQLGHSHGGSGPSSDSHSKPKEQPYEEVPCVCD-----------------DSARSSRRRSISDESPAPTLHADPXXXXXXXXXXXXTHKKRIVMDEKDPAHVSRPS---------------------------------VELVENDKDTAVDELESSGTXXXXXXXXXXXXXXXXXXNAPLGQSRAQKKELRG----------------------RWRRCVPQVDMENPTTQKATALLVGIVHGIAGPGGILGVMPAVRYHNWMRSMVYLGTFCATSIVIMGLFAAMYGELTSRLGQRSAVVAYRINVFSAVLSIGVGILWIVLVALGKMKAVFG 376
[Close]
BLAST of NO12G01270 vs. NCBI_GenBank
Match: XP_012198499.1 (hypothetical protein SPRG_04703 [Saprolegnia parasitica CBS 223.65] >KDO30802.1 hypothetical protein SPRG_04703 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 162.9 bits (411), Expect = 2.200e-36
Identity = 129/436 (29.59%), Postives = 190/436 (43.58%), Query Frame = 0 
Query:   12 LIVTGLTFGCIHVLTGADHLSALATLSVGSRWKAFGLGIRWGLGHSTGLILVAAILLGLGDRIDPKVLEHACSWIVGVFMILLGAWGILKARKHEMVRQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARIGVAEAAEISPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEEMGVELMPPHHFNSSAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGINDRHSNDKNTSRSKQSLSSSCAITNTSSTTGISSSPPQHRRGIAEATEPFLERECNEGYHGFLVR-------LRQCL-RVDLESHAVQRIVAFSVGIVHGIAGPGGVLGVLPAARLHSWPKASLYLATFCLSSTLIMGIFAALYGECTSRLG--SARNIEYKLELFSASLSIIVGVLWMAMILAGKLDVVFG 438
            L+ TG+ FG IHV+TG DHLSALATLS GS W++F LG+RWG+GHS GLIL+A   + L  +++   L      IVGVFM+ LG +G+    K  +                                         A +   +    +P ++                                  E  P    +S +                                            + + H     T+   ++      IT+++ +  +     +      +  E  LE +  E     LV         R CL  +++++ A Q++ A  VGIVHGIAGPGG+LGVLPA  LH+W K+  YL +FC++S LIMG+FAA YGE T++LG  SAR I Y + +FS+ LS++VG+LW+ ++  GKL  VFG
Sbjct:   14 LVGTGVLFGVIHVMTGPDHLSALATLSAGSSWRSFALGMRWGMGHSIGLILMAVFFILLDGKLNLDKLTIVTDVIVGVFMVALGGYGLYSGHKKYL-----------------------------------------ATLAELDTTNTTPAKT-------------------------------RSYEKCPDVDSSSDS-----------------------------------------EADLKEIHLAPIGTTSEDEA-----TITSSTGSPTVPDIDDEMEELDLDEIEGALEAQLEE--QSALVHSPAPVCGRRSCLPTINMDNPATQKVTALCVGIVHGIAGPGGILGVLPAVGLHNWTKSIAYLGSFCVTSILIMGLFAAFYGEATAQLGRRSAR-IAYGIAVFSSMLSVLVGILWIVLVATGKLQDVFG 328
[Close]
BLAST of NO12G01270 vs. NCBI_GenBank
Match: XP_012211358.1 (hypothetical protein SPRG_16659 [Saprolegnia parasitica CBS 223.65] >KDO17935.1 hypothetical protein SPRG_16659 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 161.8 bits (408), Expect = 4.900e-36
Identity = 125/429 (29.14%), Postives = 177/429 (41.26%), Query Frame = 0 
Query:   12 LIVTGLTFGCIHVLTGADHLSALATLSVGSRWKAFGLGIRWGLGHSTGLILVAAILLGLGDRIDPKVLEHACSWIVGVFMILLGAWGILKARKHEMVRQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARIGVAEAAEISPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEEMGVELMPPHHFNSSAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGINDRHSNDKNTSRSKQSLSSSCAITNTSSTTGISSSPPQHRRGIAEATEPFLERECNEGYHGFLVRLRQCL-RVDLESHAVQRIVAFSVGIVHGIAGPGGVLGVLPAARLHSWPKASLYLATFCLSSTLIMGIFAALYGECTSRLG--SARNIEYKLELFSASLSIIVGVLWMAMILAGKLDVVFG 438
            L+ TG+ FG IHV+TG DHLSALATLS GS W++F LG+RWG+GHS GLIL+A   + L  +++   L      IVGVFM+ LG +G+    K  +                                              A  AE+    +                               +G          SS G                                                      S +   +       +     G   +  + +  +  +  P   R             R CL  +++++ A Q++ A  VGIVHGIAGPGG+LGVLPA  LH+W K+  YL +FC++S LIMG+FAA YGE T++LG  SAR I Y + +FS+ LS++VG+LW+ ++  GKL  VFG
Sbjct:   14 LVGTGVLFGVIHVMTGPDHLSALATLSAGSSWRSFALGMRWGMGHSIGLILMAVFFILLDGKLNLDKLTIVTDVIVGVFMVALGGYGLYSGHKKYL----------------------------------------------ATLAELDTTNTTSAKTRSYEKCPDVDSSSDSEADLKEIHLAPIGTTSEDEATIASSTG------------------------------------------------------SPTVPDIDDEMEELDLDEIEGALEAQLEEQSALVHSPAPVCGR-------------RSCLPTINMDNPATQKVTALCVGIVHGIAGPGGILGVLPAVGLHNWTKSIAYLGSFCVTSILIMGLFAAFYGEATAQLGRRSAR-IAYGIAVFSSMLSVLVGILWIVLVATGKLQDVFG 328
[Close]
BLAST of NO12G01270 vs. NCBI_GenBank
Match: XP_008914398.1 (hypothetical protein PPTG_18079 [Phytophthora parasitica INRA-310] >ETK73309.1 hypothetical protein L915_19746 [Phytophthora parasitica] >ETL26744.1 hypothetical protein L916_19631 [Phytophthora parasitica] >ETL79976.1 hypothetical protein L917_19482 [Phytophthora parasitica] >ETN00386.1 hypothetical protein PPTG_18079 [Phytophthora parasitica INRA-310] >ETO61714.1 hypothetical protein F444_20312 [Phytophthora parasitica P1976] >ETP24247.1 hypothetical protein F441_02711 [Phytophthora parasitica CJ01A1] >KUF91614.1 hypothetical protein AM588_10003646 [Phytophthora nicotianae])

HSP 1 Score: 161.4 bits (407), Expect = 6.400e-36
Identity = 126/437 (28.83%), Postives = 181/437 (41.42%), Query Frame = 0 
Query:    2 TAISPEEAGKLIVTGLTFGCIHVLTGADHLSALATLSVGSRWKAFGLGIRWGLGHSTGLILVAAILLGLGDRIDPKVLEHACSWIVGVFMILLGAWGILKARKHEMVRQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARIGVAEAAEISPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEEMGVELMPPHHFNSSAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGINDRHSNDKNTSRSKQSLSSSCAITNTSSTTGISSSPPQHRRGIAEATEPFLERECNEGYHGFLVRLRQCLRVDLESHAVQRIVAFSVGIVHGIAGPGGVLGVLPAARLHSWPKASLYLATFCLSSTLIMGIFAALYGECTSRL-GSARNIEYKLELFSASLSIIVGVLWMAMILAGKLDVVFG 438
            T++S    GK+I TGL  G +HVLTG DHLSALA ++ GS W+AF LGIRWG GHS GLI++A I    G  +D   +    +++VG FMI LG W  +  RK    + K                                       +   E   +   ++                                 VEL+P      S                                          S  + +        S S  ++  + A  ++S    +       +   A+  +P      N          + C     E+ A Q+I+A  VGIVHG AGPGG+LGVLPA  L+ W K+  YL +FC++S  IMG+FAALYGE T RL G++  +E+++ +FSA  S IVGV W+ +  +G++  VFG
Sbjct:   13 TSLSEASLGKIISTGLLLGVVHVLTGPDHLSALAAMTTGSSWRAFTLGIRWGCGHSIGLIIMALIFFAAGQTVDLDAVGGYLNYVVGFFMIALGVWTGVHVRKKYQKQLKEGV----------------------------------QSLVSGEGGHVDSNRASHSSTGATPTNL---------------------VELVPLSQRRVSTA---------------------------------------ASPAVGEA---SPQISMSPANVGETSASPSSSFHLLVKEDGDSSQAAGADTVKPSKLHPNN---------WKCCQNASFENPATQKIMALLVGIVHGFAGPGGILGVLPAVVLNDWVKSMAYLGSFCVASIFIMGVFAALYGEITGRLGGNSLVVEFRIGIFSAFFSFIVGVAWIGLQASGQMSAVFG 343
[Close]
BLAST of NO12G01270 vs. NCBI_GenBank
Match: KUF79646.1 (hypothetical protein AM587_10005716 [Phytophthora nicotianae])

HSP 1 Score: 161.4 bits (407), Expect = 6.400e-36
Identity = 126/437 (28.83%), Postives = 181/437 (41.42%), Query Frame = 0 
Query:    2 TAISPEEAGKLIVTGLTFGCIHVLTGADHLSALATLSVGSRWKAFGLGIRWGLGHSTGLILVAAILLGLGDRIDPKVLEHACSWIVGVFMILLGAWGILKARKHEMVRQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARIGVAEAAEISPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEEMGVELMPPHHFNSSAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGINDRHSNDKNTSRSKQSLSSSCAITNTSSTTGISSSPPQHRRGIAEATEPFLERECNEGYHGFLVRLRQCLRVDLESHAVQRIVAFSVGIVHGIAGPGGVLGVLPAARLHSWPKASLYLATFCLSSTLIMGIFAALYGECTSRL-GSARNIEYKLELFSASLSIIVGVLWMAMILAGKLDVVFG 438
            T++S    GK+I TGL  G +HVLTG DHLSALA ++ GS W+AF LGIRWG GHS GLI++A I    G  +D   +    +++VG FMI LG W  +  RK    + K                                       +   E   +   ++                                 VEL+P      S                                          S  + +        S S  ++  + A  ++S    +       +   A+  +P      N          + C     E+ A Q+I+A  VGIVHG AGPGG+LGVLPA  L+ W K+  YL +FC++S  IMG+FAALYGE T RL G++  +E+++ +FSA  S IVGV W+ +  +G++  VFG
Sbjct:   38 TSLSEASLGKIISTGLLLGVVHVLTGPDHLSALAAMTTGSSWRAFTLGIRWGCGHSIGLIIMALIFFAAGQTVDLDAVGGYLNYVVGFFMIALGVWTGVHVRKKYQKQLKEGV----------------------------------QSLVSGEGGHVDSNRASHSSTGATPTNL---------------------VELVPLSQRRVSTA---------------------------------------ASPAVGEA---SPQISMSPANVGETSASPSSSFHLLVKEDGDSSQAAGADTVKPSKLHPNN---------WKCCQNASFENPATQKIMALLVGIVHGFAGPGGILGVLPAVVLNDWVKSMAYLGSFCVASIFIMGVFAALYGEITGRLGGNSLVVEFRIGIFSAFFSFIVGVAWIGLQASGQMSAVFG 368
[Close]
BLAST of NO12G01270 vs. NCBI_GenBank
Match: XP_024576740.1 (hypothetical protein L915_02890 [Plasmopara halstedii] >CEG40371.1 hypothetical protein L915_02890 [Plasmopara halstedii])

HSP 1 Score: 161.0 bits (406), Expect = 8.400e-36
Identity = 146/429 (34.03%), Postives = 204/429 (47.55%), Query Frame = 0 
Query:   11 KLIVTGLTFGCIHVLTGADHLSALATLSVGSRWKAFGLGIRWGLGHSTGLILVAAILLGLGDRIDPKVLEHACSWIVGVFMILLGAWGILKARKHEMVRQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARIGVAEAAEISPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEEMGVELMPPHHFNSSAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGINDRHSNDKNTSRSKQSLSSS-CAITNTSSTTGISSSPPQHRRGIAEATEPFLERECNEGYHGFLVRLRQCLRVDLESHAVQRIVAFSVGIVHGIAGPGGVLGVLPAARLHSWPKASLYLATFCLSSTLIMGIFAALYGECTSRLGS-ARNIEYKLELFSASLSIIVGVLWMAMILAGKLDVVFG 438
            ++ + G+ FG +HV+TG DHLSALATL+ GS W++F LG RWG GHS GLIL+A   + L  + D   L      +VGVFMI+LG +GI +  K     ++ XXXXXXXXXXXXXXXXXXXXXX               ++   E  E+                                 DE++          NS+  K                                          +   H+ +++ S    SL +S C       T    SS          +    ++R+     +GF     Q   +D ++   Q+  A  VGIVHGIAGPGG+LGVLPA  LH   K+ +YL++FCL+S L MG+FAA+YGE T RLG  +  + +++ + S+ LS+IVGVLW+ +   GKL  +FG
Sbjct:   27 QIFLAGMFFGLVHVMTGPDHLSALATLAAGSSWRSFALGFRWGCGHSIGLILMALAFIALDGKFDFSALTVVLDVLVGVFMIILGVYGIHEGMKKARKSKQXXXXXXXXXXXXXXXXXXXXXXXMESESGTGSIASPSVKLLKQEIHEV----------------------------VVTFSDEDLSCATRRRKVENSTTSK---------------------------LQDDGTDEEDAVMVNVEVTHARERSASVDTISLENSPCESVKKLLTDRHQSSDETF------SDNDEMKRDSKLMCYGF-----QLPTIDFQNVQTQKCTALIVGIVHGIAGPGGILGVLPAVGLHDTVKSCIYLSSFCLASILTMGLFAAVYGEATGRLGDRSELLAFRISIISSMLSVIVGVLWLILAALGKLQEIFG 389
The following BLAST results are available for this feature:
BLAST of NO12G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25911.16.500e-8952.07hypothetical protein Naga_100048g26 [Nannochlorops... [more]
XP_009839707.19.600e-4030.79hypothetical protein H257_13758 [Aphanomyces astac... [more]
XP_009839706.19.600e-4030.79hypothetical protein, variant [Aphanomyces astaci]... [more]
XP_009536036.11.200e-3730.21hypothetical protein PHYSODRAFT_527679 [Phytophtho... [more]
XP_008881082.11.500e-3731.72hypothetical protein H310_14896 [Aphanomyces invad... [more]
XP_012198499.12.200e-3629.59hypothetical protein SPRG_04703 [Saprolegnia paras... [more]
XP_012211358.14.900e-3629.14hypothetical protein SPRG_16659 [Saprolegnia paras... [more]
XP_008914398.16.400e-3628.83hypothetical protein PPTG_18079 [Phytophthora para... [more]
KUF79646.16.400e-3628.83hypothetical protein AM587_10005716 [Phytophthora ... [more]
XP_024576740.18.400e-3634.03hypothetical protein L915_02890 [Plasmopara halste... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010047NSK010047Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01270.1NO12G01270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630938gene_5285Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100048g26gene4624Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01270.1NO12G01270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01270 ID=NO12G01270|Name=NO12G01270|organism=Nannochloropsis oceanica|type=gene|length=1522bp
ATGACCGCCATCTCACCTGAAGAAGCGGGCAAGCTCATTGTCACAGgtgt
gttgcgttgttgtgcggcgagtggttgcaggttatggctcgctcatttgc
gcttaaagtttccaaagcgaaagcccctttcctcctcattcactcactct
cttccttccaacccgccaatttcagGTCTAACGTTCGGCTGTATCCACGT
TCTGACCGGGGCAGATCATCTCTCAGCGTTGGCCACATTATCTGTGGGCT
CCAGATGGAAAGCTTTCGGTCTGGGAATCAGgtaagaaaaagcgggcagc
tgtggtgagattgtgcgcgcaacatgtgcaactcaccaatcacctgcatc
ctgtttccagGTGGGGCCTCGGTCATTCCACCGGTCTTATTCTTGTGGCC
GCCATCCTGCTGGGTCTCGGCGATCGTATCGATCCCAAAGTCCTCGAACA
CGCATGTTCATGGATAGTCGGAGTGTTTATGATTCTTCTAGGTGCATGGG
GCATCCTCAAAGCCCGCAAGCACGAGATGGTCCGTCAAAAAGCAGTAGCA
GCTGCTGCAGCTGTAGCAACATCAAATGAACTGGAAGGTGAGGGAGGGAA
GGGGGGGGGGGATGATACCTTGCAGCAGCAGGAAGAAGGACGAGGAGGGC
GGGCAAGGATCGGTGTCGCCGAAGCTGCTGAGATAAGTCCCCTGCAGAGC
GTCAGTGACCCCAGATCAACTGCTGCTGATACTGCTGATACTGCATCGAC
TCCATCCTCTTCCTCATCTTCCTTCGCAGATGAGGACGAAGAGATGGGGG
TTGAGTTGATGCCGCCGCATCATTTCAACAGCAGCGCAGGCAAAAGTGGT
AGCGGTAGCGGTGAATATGGCAGTGAAGGGGATGATAACAAGGACGGAAA
GGAGGAAGGGAAAGAGGAGAAACAAGAGGAAAAGAGGAGAAGAGAGAGTA
ACGACAGCAGCAGCTATGGCATCAACGACCGCCACAGCAACGACAAGAAC
ACTTCGAGGTCAAAACAGAGTTTGTCGTCCTCCTGTGCAATCACCAATAC
CAGCAGCACCACTGGTATATCTTCTTCTCCTCCACAGCACCGACGAGGAA
TTGCGGAAGCCACCGAACCTTTCCTTGAGCGCGAATGCAACGAAGGTTAC
CATGGGTTTCTTGTTCGCCTCCGGCAGTGCCTCCGCGTAGACCTTGAGTC
CCATGCCGTCCAACGCATTGTGGCCTTTTCTGTCGGGATCGTCCATGGCA
TCGCTGGGCCCGGCGGGGTGCTAGGTGTCCTTCCGGCAGCTCGTTTGCAT
TCATGGCCGAAGGCGAGTCTGTACCTGGCAACGTTCTGTCTGTCGTCAAC
GTTAATAATGGGGATATTTGCGGCCTTGTATGGAGAGTGCACGTCGCGGT
TGGGCTCGGCGAGGAATATTGAATACAAGTTGGAATTGTTTAGTGCCTCT
TTGTCGATCATCGTGGGTGTGCTGTGGATGGCCATGATTTTGGCGGGGAA
GTTGGATGTTGTATTTGGGTAG
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protein sequence of NO12G01270.1

>NO12G01270.1-protein ID=NO12G01270.1-protein|Name=NO12G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=438bp
MTAISPEEAGKLIVTGLTFGCIHVLTGADHLSALATLSVGSRWKAFGLGI
RWGLGHSTGLILVAAILLGLGDRIDPKVLEHACSWIVGVFMILLGAWGIL
KARKHEMVRQKAVAAAAAVATSNELEGEGGKGGGDDTLQQQEEGRGGRAR
IGVAEAAEISPLQSVSDPRSTAADTADTASTPSSSSSSFADEDEEMGVEL
MPPHHFNSSAGKSGSGSGEYGSEGDDNKDGKEEGKEEKQEEKRRRESNDS
SSYGINDRHSNDKNTSRSKQSLSSSCAITNTSSTTGISSSPPQHRRGIAE
ATEPFLERECNEGYHGFLVRLRQCLRVDLESHAVQRIVAFSVGIVHGIAG
PGGVLGVLPAARLHSWPKASLYLATFCLSSTLIMGIFAALYGECTSRLGS
ARNIEYKLELFSASLSIIVGVLWMAMILAGKLDVVFG*
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Synonyms
Publications