NO11G03350, NO11G03350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G03350 vs. NCBI_GenBank
Match: XP_012755576.1 (hypothetical protein SAMD00019534_046320 [Acytostelium subglobosum LB1] >GAM21457.1 hypothetical protein SAMD00019534_046320 [Acytostelium subglobosum LB1]) HSP 1 Score: 102.4 bits (254), Expect = 1.800e-18 Identity = 81/224 (36.16%), Postives = 104/224 (46.43%), Query Frame = 0 Query: 1 MNRIFGQKKAQAPMPTLGEASGKIDGRVKG-XXXXXXXXXXXXXXXXXXXXXXTGAAQANHKRRALDVLKRKKMFEQQRDQLAAQSFNVDQTNFALESVKDTITTVDAMKGAHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRNYGVSDDIDEADLDAELAGLEDELEGVGEEEADAAGATAETTPSYLL-PSEPLNTPEPKATTDEFGLPVAPLH 223 M R FG K P PTL EA+ ++D + G G AQ K +A+ VLK+KKM+E QR+QL+ QSFN++QT FA +S++DTI TV AMK K + R Y D +DE +L+AEL +ED+LE E TPSYL+ PS P T EP+A DEFGLP P H Sbjct: 1 MRRFFGGSK-NVPAPTLDEANKRLDNNIGGLDEKIRKLDQELSVYRQQLKNTRPGPAQNGIKAKAMRVLKQKKMYEAQRNQLSQQSFNMEQTKFATQSMQDTIITVGAMKQGAKEMKKQFKQIDIEDVDSLQDEMQDLLDFNNEIQESMSRAYSTPDSLDETELEAELMSMEDDLE-------------LEETPSYLMAPSAP--TSEPQA-VDEFGLP-EPAH 206
BLAST of NO11G03350 vs. NCBI_GenBank
Match: CBY22634.1 (unnamed protein product [Oikopleura dioica]) HSP 1 Score: 101.7 bits (252), Expect = 3.100e-18 Identity = 76/221 (34.39%), Postives = 99/221 (44.80%), Query Frame = 0 Query: 1 MNRIFGQKKAQAPMPTLGEASGKIDGRVKG-XXXXXXXXXXXXXXXXXXXXXXTGAAQANHKRRALDVLKRKKMFEQQRDQLAAQSFNVDQTNFALESVKDTITTVDAMKGAHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRNYGVSDDIDEADLDAELAGLEDELEGVGEEEADAAGATAETTPSYLLPSEPLNTPEPKATTDEFGLPVAP 221 MNRIFG K +AP P L + +D R G + K++A+ VLK++KM+E QR+Q++ QSFN+DQ NF ++S+KDT TV AMK K +GRNYG+SDDIDEADL+AEL L D+ D A TP+ PS P+ DEFGLP P Sbjct: 1 MNRIFGSGKPKAPPPNLNDCVQNLDSRGDSIDKKIAKLDAELVKYKNQMKTMRNGPGKNAVKQKAMRVLKQRKMYEGQREQISNQSFNMDQANFTIQSLKDTQDTVTAMKAGAKAMKKEYKKINIDKIEDLQDELEDMMLDANEIQEVMGRNYGISDDIDEADLEAELDALGDDFLADDNLLDDIA------TPN--TPSTEPGLPDATGEVDEFGLPKIP 213
BLAST of NO11G03350 vs. NCBI_GenBank
Match: XP_002186114.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65584.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 101.7 bits (252), Expect = 3.100e-18 Identity = 130/227 (57.27%), Postives = 154/227 (67.84%), Query Frame = 0 Query: 1 MNRIFGQKKAQAPMPTLGE-ASGKIDGRVKGXXXXXXXXXXXXXXXXXXXXXXTGAAQANHKRRALDVLKRKKMFEQQRDQLAAQSFNVDQTNFALESVKDTITTV-DAMKGAHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRNYGVSDDIDEADLDAELAGLEDELEGVGEEEADAAGATAETTPSYLLPSEPLNTPEPK--ATTDEFGLPVAPLHN 224 M R+FG+KKA+AP P+L E +SG XXXXXXXXXXXXXXXXXXXXXX K+M+EQQRD ++ Q FN+DQT+F LES K +++TV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LGRN+ DD+DEADLDAEL L DEL EEE +A TA+ PSYLLPS PL+TP K ++ D++GLP AP+ N Sbjct: 1 MKRVFGKKKAEAPAPSLDETSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRMYEQQRDTVSGQQFNIDQTSFGLESAKASVSTVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINEALGRNFATPDDLDEADLDAELEMLGDEL----EEEFEA--ETADAAPSYLLPSTPLDTPGEKTGSSADDYGLPTAPIGN 221
BLAST of NO11G03350 vs. NCBI_GenBank
Match: XP_005849964.1 (hypothetical protein CHLNCDRAFT_51181 [Chlorella variabilis] >EFN57862.1 hypothetical protein CHLNCDRAFT_51181 [Chlorella variabilis]) HSP 1 Score: 100.9 bits (250), Expect = 5.300e-18 Identity = 81/232 (34.91%), Postives = 105/232 (45.26%), Query Frame = 0 Query: 1 MNRIFGQKKAQAPMPTLGEASGKIDGRVKG---XXXXXXXXXXXXXXXXXXXXXXTGAAQANHKRRALDVLKRKKMFEQQRDQLAAQSFNVDQTNFALESVKDTITTVDAMKGAHK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRNYGVSDDIDEADLDAELAGLEDELEGVGEEEADAAGATAETTPSYL----LPSEPLN---TPEPKATTDEFGLPVAP 221 M R+FG KK AP PT+ EA K++ V+G G AQ KRRAL VLK+K+++E QRDQL Q FNV+QT FA++S++DT+ TV AMK A K +G +GV +D+DE +L EL LED+L A G T+ + P+YL LP P P DEFGLP P Sbjct: 1 MRRLFGSKKPAAPAPTMDEAVDKLN--VRGDTLDEKIRKLDEQLAKHRDNIKKTRPGPAQEAAKRRALVVLKQKRLYESQRDQLYNQQFNVEQTTFAMQSMQDTVHTVSAMKAAGKEMKGFMKDNNLKIENIEKLHDEMSDMLDYHQEIQDVMGTAFGVPEDVDEDELMGELDALEDDLA--------AEGTTSGSVPAYLQDVDLPEVPQGQAAQPAQAQAADEFGLPAIP 222
BLAST of NO11G03350 vs. NCBI_GenBank
Match: XP_636927.1 (SNF7 family protein [Dictyostelium discoideum AX4] >Q54JK4.1 RecName: Full=Charged multivesicular body protein 5; AltName: Full=Vacuolar protein-sorting-associated protein 60 >EAL63422.1 SNF7 family protein [Dictyostelium discoideum AX4]) HSP 1 Score: 100.5 bits (249), Expect = 6.900e-18 Identity = 78/221 (35.29%), Postives = 107/221 (48.42%), Query Frame = 0 Query: 1 MNRIFGQKKAQAPMPTLGEASGKIDGRVKGXXXXXXXXXXXXXXXXXXXXXXT--GAAQANHKRRALDVLKRKKMFEQQRDQLAAQSFNVDQTNFALESVKDTITTVDAMKGAHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRNYGVSDDIDEADLDAELAGLEDELEGVGEEEADAAGATAETTPSYLL-PSEPLNTPEPKATTDEFGLPV 219 M R FG Q P PTL EA+ +I GR+ G T G AQ K++A+ VL++KKM+E+QRDQ+A+ SFN++QT FA ES++DTITTV AMK K LGR Y D +DE++L+AEL + +ELE + PSYL+ PS P P +++ DE+GLP+ Sbjct: 1 MKRFFGVSNNQ-PAPTLDEATKRIGGRM-GQMDEKINGLNQELLAYDKQIKATRPGPAQNAIKQKAIRVLQQKKMYERQRDQMASTSFNMEQTKFATESMRDTITTVSAMKQGAKDMKTQLKHIKIEDVDDMQDEMQDLLDYNNEIQESLGRAYQTPDTLDESELEAELMSMGEELE------------LEASMPSYLMTPSVPTTDPH-QSSVDEYGLPI 206
BLAST of NO11G03350 vs. NCBI_GenBank
Match: KDD77069.1 (Snf7-like protein [Helicosporidium sp. ATCC 50920]) HSP 1 Score: 100.5 bits (249), Expect = 6.900e-18 Identity = 87/223 (39.01%), Postives = 114/223 (51.12%), Query Frame = 0 Query: 1 MNRIFGQKKAQAPMPTLGEASGKIDGRVKG-XXXXXXXXXXXXXXXXXXXXXXTGAAQANHKRRALDVLKRKKMFEQQRDQLAAQSFNVDQTNFALESVKDTITTVDAMKGAHK--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRNYGVSDDIDEADLDAELAGLEDELEGVGEEEADAAGATAETTPSYLLPSEPLNTPEPKATTDEFGLPVAP 221 M RIFG +K + P PTL +AS KI+ R GAAQ KRRAL VLK+K+++E QRDQL Q +N++QTNFA+ SV+D++ TV AM A K XXXXXXXX LG++Y V D++DE++L EL LEDEL E +A GA LP+ P T P+A +++GLP P Sbjct: 1 MKRIFGFRKERPPPPTLEQASDKINSRGDTLDEKIRKLDAQLLQHRETIKKLRPGAAQEAAKRRALSVLKQKRLYEGQRDQLYNQQYNLEQTNFAVSSVQDSVHTVKAMAAAGKELSTVMKSKELRIENIEKMQDNMQDLLXXXXXXXXILGQSYAVPDEMDESELMDELDALEDEL---ALETEEAPGAMPAYLQEQDLPAAPTRT-APQAQEEDYGLPAVP 219
BLAST of NO11G03350 vs. NCBI_GenBank
Match: XP_009821334.1 (hypothetical protein H257_00374 [Aphanomyces astaci] >ETV88934.1 hypothetical protein H257_00374 [Aphanomyces astaci]) HSP 1 Score: 99.4 bits (246), Expect = 1.500e-17 Identity = 86/226 (38.05%), Postives = 109/226 (48.23%), Query Frame = 0 Query: 1 MNRIFGQKKAQAPMPTLGEASGKIDGRVKGXXXXXXXXXXXXXXXXXXXXXXTGAAQANHKRRALDVLKRKKMFEQQRDQLAAQSFNVDQTNFALESVKDTITTVDAMKGAHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRNYGVSDDIDEADLDAELAGLEDELEGVGEEEADAAGATAETTPSYL---LPSEPLNTPE--PKATTDEFGLPVAPL 222 MNRIFG+KK +AP + + G+++GRV G A + K+RAL LKRKKM+EQQRD +AAQSFN++Q XXXXXXXXXXXX LGR+YGV DIDE++L+AEL GLEDE + A A PSYL LP+ P + A DE+GLP+AP+ Sbjct: 1 MNRIFGKKKPEAPQVNITDVHGRVEGRVDNLDMKISKLEEELQKYRQQMAKAKGPALTSIKQRALQTLKRKKMYEQQRDSMAAQSFNIEQXXXXXXXXXXXXXXXXXXXXXXTQLKAETKKFNFAELENVQDDXXXXXXXXXXXXEILGRSYGVGQDIDESELEAELEGLEDEW------AMEEAVAPQHAAPSYLATDLPAAPTGVKDTPTAAGVDEYGLPLAPV 220
BLAST of NO11G03350 vs. NCBI_GenBank
Match: XP_012759358.1 (hypothetical protein SAMD00019534_004710 [Acytostelium subglobosum LB1] >GAM17296.1 hypothetical protein SAMD00019534_004710 [Acytostelium subglobosum LB1]) HSP 1 Score: 98.2 bits (243), Expect = 3.400e-17 Identity = 77/221 (34.84%), Postives = 103/221 (46.61%), Query Frame = 0 Query: 1 MNRIFGQKKAQAPMPTLGEASGKIDGRVKG-XXXXXXXXXXXXXXXXXXXXXXTGAAQANHKRRALDVLKRKKMFEQQRDQLAAQSFNVDQTNFALESVKDTITTVDAMKGAHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRNYGVSDDIDEADLDAELAGLEDELEGVGEEEADAAGATAETTPSYL-LPSEPLNTPEPKATTDEFGLPVA 220 M R FG KA AP PTL EA+ ++D + G G AQ N K +AL V+K+KKM+E QR+QL+ QSFN++QT F +S++DTI TV AMK K L R Y + +DE++L+AEL +++ELE E TPSYL LPS P ++DE+GLP A Sbjct: 12 MKRFFGASKA-APAPTLDEATKRLDMNIGGLDEKINKLDQELAVYRKQLKTTRPGPAQNNIKTKALRVMKQKKMYEAQRNQLSQQSFNMEQTKFTTQSMQDTIITVSAMKQGAKEMKKQFKQIDVDDIDSLQDEMQDLLDFNNEIQSSLSRAYETPESLDESELEAELMSMDEELE-------------LEDTPSYLSLPSASTAIP----SSDEYGLPEA 214
BLAST of NO11G03350 vs. NCBI_GenBank
Match: ORX43588.1 (hypothetical protein BCR36DRAFT_141483 [Piromyces finnis]) HSP 1 Score: 98.2 bits (243), Expect = 3.400e-17 Identity = 65/166 (39.16%), Postives = 85/166 (51.20%), Query Frame = 0 Query: 1 MNRIFGQKKAQAPMPTLGEASGKIDGRVKG-XXXXXXXXXXXXXXXXXXXXXXTGAAQANHKRRALDVLKRKKMFEQQRDQLAAQSFNVDQTNFALESVKDTITTVDAMKGAHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRNYGVSDDIDEADLDA 166 MNR+FG K P PTL EA DGRV GAA+ + K++A+ VLK+KKM+E QRDQL QSFN++QT+FA E++K+T+TTV+AMK A+K LGR YG+ +DIDEADL+A Sbjct: 1 MNRLFGGSK--KPAPTLEEAISNTDGRVDSVEVKIRRLDAELAKYKEQMSRMREGAAKNSVKQKAMRVLKQKKMYENQRDQLMQQSFNMEQTSFATENLKNTVTTVNAMKQANKQLKKQYKKVNIDKIEAMQDEMEDLLDQANEIQEALGRTYGLPEDIDEADLEA 164
BLAST of NO11G03350 vs. NCBI_GenBank
Match: PTQ31333.1 (hypothetical protein MARPO_0113s0057 [Marchantia polymorpha]) HSP 1 Score: 98.2 bits (243), Expect = 3.400e-17 Identity = 77/233 (33.05%), Postives = 105/233 (45.06%), Query Frame = 0 Query: 1 MNRIFGQKKAQAPMPTLGEASGKIDGRVKG-XXXXXXXXXXXXXXXXXXXXXXTGAAQANHKRRALDVLKRKKMFEQQRDQLAAQSFNVDQTNFALESVKDTITTVDAMKGAHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRNYGVSDDIDEADLDAELAGLEDELEGVGEEEADAAGA------TAETTPSYLLPSEPL------NTPEPKATTDEFGLPVAP 221 M R+FG KK +AP+PT+ EA+ +++ R G AQ K RA+ +LK+KKM+E QRDQL +Q+FN++Q +FA E +KD T+ AMK A+K LGR+Y V DDIDE +L ELA LE+++ EE +D A E P LPS P + DE+G P AP Sbjct: 1 MKRVFGVKKEKAPVPTVEEATERMNKRGDNVDEKIRKLDAELVKYREQIKRTRPGPAQEAVKARAMRILKQKKMYEGQRDQLYSQTFNLEQVSFATEGIKDAQQTMSAMKAANKELKGTMKTLKIDDIDKMQDEMMDLVDYSNEIQESLGRSYSVPDDIDEDELMGELAALEEDMG--SEEVSDGVPAYLQPDKEFEHEPELNLPSAPSGQTAQHQAASAQGAVDEYGFPAAP 231 The following BLAST results are available for this feature:
BLAST of NO11G03350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G03350 ID=NO11G03350|Name=NO11G03350|organism=Nannochloropsis oceanica|type=gene|length=1901bpback to top protein sequence of NO11G03350.1 >NO11G03350.1-protein ID=NO11G03350.1-protein|Name=NO11G03350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
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