NO11G03010, NO11G03010 (gene) Nannochloropsis oceanica

Overview
NameNO11G03010
Unique NameNO11G03010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1403
Alignment locationchr11:945326..946728 +

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Properties
Property NameValue
DescriptionShort-chain dehydrogenase reductase sdr
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:945326..946728 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO11G03010 vs. NCBI_GenBank
Match: OWZ24632.1 (Short-chain dehydrogenase/reductase SDR [Phytophthora megakarya])

HSP 1 Score: 284.3 bits (726), Expect = 3.900e-73
Identity = 152/261 (58.24%), Postives = 192/261 (73.56%), Query Frame = 0
Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M LS   ALVTGAASGLG+ATA RF+Q GARV+L DLP +  A +A      +++     F+  DV +   V+A LD A S +G+ VN  VNCAGIA+A + L KKG H L  F + ++VN  G+FNV RLAAERMS   P   G RG+++ TASIAA++GQIGQAAYAASK A+ G+TLPLARDL+  G+RV +IAPGLF TP+LA LPE++Q++LG +VP P+RLG+P E+A LV SI++N MINGE IRLDGALRMPP
Sbjct:    1 MALSSRVALVTGAASGLGRATATRFVQNGARVILCDLPTSDGAKVA------RELGTSCHFSPTDVTNEDDVAAALDLAESSFGEPVNTAVNCAGIALAIKTLSKKGVHQLFQFQQTINVNTVGSFNVARLAAERMSKTRPGPGGERGIIINTASIAAYEGQIGQAAYAASKGAIVGMTLPLARDLASYGIRVNTIAPGLFMTPLLAGLPEKMQQQLGESVPFPSRLGNPEEYAQLVHSIIDNKMINGETIRLDGALRMPP 255          
BLAST of NO11G03010 vs. NCBI_GenBank
Match: XP_002999173.1 (3-hydroxyacyl-CoA dehydrogenase, putative [Phytophthora infestans T30-4] >EEY69319.1 3-hydroxyacyl-CoA dehydrogenase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 282.0 bits (720), Expect = 2.000e-72
Identity = 150/261 (57.47%), Postives = 192/261 (73.56%), Query Frame = 0
Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M L++  A+VTGAASGLG+ATA RF++ GARV+L DLP +    +A      +++     F+  DV +   V+A LD A S +G+ VN VVNCAG+A+A + L KKG H L  F + ++VN  G+FNV RLAAERMS   P   G RGV++ TASIAA++GQIGQAAYAASK A+ G+TLPLARDL+  G+RV +IAPGLF TP+LA LPE+VQK+LG TVP P+RLG+P E+A L  +I++N MINGE IRLDGALRMPP
Sbjct:    1 MALANRIAIVTGAASGLGRATATRFVENGARVILCDLPTSDGVNVA------RELGVSCHFSPTDVTNEDDVTAALDLAESSFGEPVNTVVNCAGVALAIKTLSKKGVHQLFQFQQTINVNTVGSFNVARLAAERMSKTRPGPGGERGVIINTASIAAYEGQIGQAAYAASKGAIVGMTLPLARDLASYGIRVNTIAPGLFMTPLLAGLPEKVQKQLGDTVPFPSRLGNPEEYAQLAHAIIDNKMINGETIRLDGALRMPP 255          
BLAST of NO11G03010 vs. NCBI_GenBank
Match: PKN58767.1 (3-hydroxyacyl-CoA dehydrogenase [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14])

HSP 1 Score: 282.0 bits (720), Expect = 2.000e-72
Identity = 150/261 (57.47%), Postives = 194/261 (74.33%), Query Frame = 0
Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M + +V A+VTG ASGLG+ATA RF +QGA+V +ADLP++    +A+  EL  ++    +F   DV   +  +A L RA   +G  VN +VNCAGIA+A + + K+GPH+LE F KV++VN  GTFN+IRL +  M+   P++ G RGV++ TAS+AA+DGQIGQAAY+ASK AV G+TLP+ARDL+  G+RV +IAPGLFKTPMLA LP+QVQ EL +TVP P RLGDP E+  L QSIVEN M+NGEVIRLDGALRM P
Sbjct:    1 MQIKNVIAIVTGGASGLGRATAARFARQGAKVAIADLPSSAGEQVAA--ELGDNV----IFCPTDVTSEADATATLARAREAFG-PVNTLVNCAGIAIAVKTVSKRGPHALELFTKVITVNTIGTFNMIRLTSAAMAGNTPNAGGERGVIINTASVAAYDGQIGQAAYSASKGAVVGMTLPIARDLASTGIRVCTIAPGLFKTPMLAGLPDQVQNELAQTVPFPARLGDPDEYGQLAQSIVENAMLNGEVIRLDGALRMAP 254          
BLAST of NO11G03010 vs. NCBI_GenBank
Match: GAX96282.1 (3-hydroxyacyl-CoA dehydrogenase, putative [Pythium insidiosum] >GAX93424.1 3-hydroxyacyl-CoA dehydrogenase, putative [Pythium insidiosum])

HSP 1 Score: 280.0 bits (715), Expect = 7.400e-72
Identity = 153/262 (58.40%), Postives = 193/262 (73.66%), Query Frame = 0
Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPPS 263
            M L++  ALVTG+ASGLG+A A RF++QGARV+L DLP +    +A  +EL  +      F   DV     V+A LD A S +GQ+VNV VNCAGIA+A + + KKG H L  F + ++VN  G+FNV RLAAERM+       G RGV++ TASIAA++GQIGQ AYAASK A+ G+TLP+ARDL+  G+RV +IAPGLFKTP+LA LPE VQ+ELG TVP P+RLG+P E+A L Q+I+EN MINGEVIR+DGALRMPPS
Sbjct:    1 MSLANRVALVTGSASGLGRAAATRFVKQGARVILCDLPTSDGRNVA--RELGPNCH----FHPTDVTSEEDVTAALDLAESSFGQSVNVAVNCAGIALAIKTVSKKGAHQLFQFQQTINVNTVGSFNVARLAAERMAKSKGLECGERGVIINTASIAAYEGQIGQVAYAASKGAIVGMTLPMARDLASYGIRVNTIAPGLFKTPLLAGLPEAVQQELGATVPFPSRLGNPDEYAQLAQAIIENKMINGEVIRIDGALRMPPS 256          
BLAST of NO11G03010 vs. NCBI_GenBank
Match: XP_024584607.1 (3-hydroxyacyl-dehydrogenase type-2 isoform x1 [Plasmopara halstedii] >CEG48238.1 3-hydroxyacyl-dehydrogenase type-2 isoform x1 [Plasmopara halstedii])

HSP 1 Score: 278.1 bits (710), Expect = 2.800e-71
Identity = 151/264 (57.20%), Postives = 188/264 (71.21%), Query Frame = 0
Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGV---FAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M L+   A++TGAASGLG+ATA RF++ GA V+L DLP +    +A         R  GV   F   DV +   V+A LD A S +G  +N VVNCAGIA+A + L KKG H L  F + ++VN  G+FNV RLAAERMS   P   G RGV++ TASIAA+DGQIGQ AYAASK A+ G+TLPLARDL+  G+RV +IAPGLF TP+LA LPE+VQK+LG TVP PNRLG+P E+A LV +I++N M+NGE IRLDGA+RMPP
Sbjct:    1 MALADRIAIITGAASGLGRATATRFVENGASVILCDLPTSDGVNVA---------RKLGVSCHFCPTDVTNEDDVAAALDLAESAFGNPINTVVNCAGIALAAKTLSKKGVHQLFQFQQSINVNTVGSFNVARLAAERMSKTRPGPGGERGVIINTASIAAYDGQIGQVAYAASKGAIVGMTLPLARDLASYGIRVNTIAPGLFMTPLLAGLPEKVQKQLGETVPFPNRLGNPVEYAQLVHAIIDNKMLNGETIRLDGAIRMPP 255          
BLAST of NO11G03010 vs. NCBI_GenBank
Match: EAT38823.1 (AAEL009324-PA [Aedes aegypti])

HSP 1 Score: 277.7 bits (709), Expect = 3.700e-71
Identity = 155/262 (59.16%), Postives = 194/262 (74.05%), Query Frame = 0
Query:    2 VLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRV--LGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            +L +  ALVTG ASGLG+AT  RF + G++VVL DLP +K   +A  +EL  ++    VF  VDVL    V+  LD A +++G+ ++V VNCAG+AVA +     KK  H LE F +VL VN  GTFNVIRL+A  M    P+ +G RGV+V TAS+AAFDGQIGQAAYAASKAAV G+TLP+ARDLS  G+R+ +IAPGLF TPML ALPE+V+  L +TVP P RLG+PSE+A+LV+SIVENPM+NGEVIRLDGALRM P
Sbjct:    1 MLKNAVALVTGGASGLGRATVERFARTGSKVVLCDLPTSKGGDVA--KELGDNV----VFVPVDVLSEKDVTGALDIAKTKFGR-LDVTVNCAGVAVAVKTYNFNKKAAHKLEDFQRVLLVNTAGTFNVIRLSAGLMGENEPNQDGQRGVIVNTASVAAFDGQIGQAAYAASKAAVVGMTLPIARDLSTQGIRICTIAPGLFNTPMLQALPEKVRAFLAKTVPFPQRLGEPSEYALLVESIVENPMLNGEVIRLDGALRMMP 255          
BLAST of NO11G03010 vs. NCBI_GenBank
Match: WP_033099298.1 (3-hydroxyacyl-CoA dehydrogenase [Thermoactinomyces daqus])

HSP 1 Score: 276.9 bits (707), Expect = 6.300e-71
Identity = 145/261 (55.56%), Postives = 192/261 (73.56%), Query Frame = 0
Query:    1 MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            M +    ALVTG ASGLG+AT  R + +G +  + DL   K A LA+  EL  D      F   DV D + V   ++R   ++G+ +++VVNCAG+AVA++VLGKKGPH+L +F+K + VN  GTFNVIRLAAE+MS  +P+  G RGV+V TAS+AAFDGQIGQAAY+ASK  + G+TLP+AR+L+R G+RV++IAPGLF TP+ A+LP++ ++ LG+ VP P RLG P E+A LVQSIVENPM+NGE IRLDGA+RM P
Sbjct:    1 MKIKDCVALVTGGASGLGEATVRRLVAEGGKAAIVDLAEEKGAKLAA--ELGDD----AFFLTADVADEASVRQVVNRIEERFGK-IDIVVNCAGVAVAEKVLGKKGPHALSSFVKTIQVNLIGTFNVIRLAAEKMSANLPNEGGERGVIVNTASVAAFDGQIGQAAYSASKGGIVGMTLPIARELARYGIRVMTIAPGLFDTPLFASLPQEARESLGKMVPFPPRLGLPDEYARLVQSIVENPMLNGETIRLDGAIRMQP 254          
BLAST of NO11G03010 vs. NCBI_GenBank
Match: XP_001659937.2 (3-hydroxyacyl-CoA dehydrogenase type-2 isoform X2 [Aedes aegypti])

HSP 1 Score: 276.9 bits (707), Expect = 6.300e-71
Identity = 155/262 (59.16%), Postives = 193/262 (73.66%), Query Frame = 0
Query:    2 VLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRV--LGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            +L +  ALVTG ASGLG+AT  RF + G++VVL DLP +K   +A  +EL  ++    VF  VDVL    V+  LD A +++G+ ++V VNCAG+AVA +     KK  H LE F +VL VN  GTFNVIRL+A  M    P+ +G RGV+V TAS+AAFDGQIGQAAYAASKAAV G+TLP+ARDLS  G+R+ +IAPGLF TPML ALPE+V+  L +TVP P RLG+PSE+A LV+SIVENPM+NGEVIRLDGALRM P
Sbjct:    1 MLKNAVALVTGGASGLGRATVERFARTGSKVVLCDLPTSKGGDVA--KELGDNV----VFVPVDVLSEKDVTGALDIAKTKFGR-LDVTVNCAGVAVAVKTYNFNKKAAHKLEDFQRVLLVNTAGTFNVIRLSAGLMGENEPNQDGQRGVIVNTASVAAFDGQIGQAAYAASKAAVVGMTLPIARDLSTQGIRICTIAPGLFNTPMLQALPEKVRAFLAKTVPFPQRLGEPSEYAQLVESIVENPMLNGEVIRLDGALRMMP 255          
BLAST of NO11G03010 vs. NCBI_GenBank
Match: XP_022787060.1 (3-hydroxyacyl-CoA dehydrogenase type-2-like isoform X1 [Stylophora pistillata] >PFX34289.1 3-hydroxyacyl-CoA dehydrogenase type-2 [Stylophora pistillata])

HSP 1 Score: 276.6 bits (706), Expect = 8.200e-71
Identity = 149/259 (57.53%), Postives = 189/259 (72.97%), Query Frame = 0
Query:    3 LSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            L     +VTG ASGLG+ATA R  + GA+VV+ADLP++    +A  +EL +       FA  DV   + V   +  A+ ++G  +NV VNCAGI +A R + KKGPH L+ F KVL VN  GTFNVIRL AE+MS   P+  G RGV++ TAS+AA+DGQIGQAAY+ASK A+ G+TLP+ARDLS+ G+RV +IAPGLF TP+L +LPE+V+ ELG+ VP P+RLGDP EF  LVQSI+ENPM+NGEVIRLDGALRM P
Sbjct:    8 LQKAVCIVTGGASGLGRATAQRLAKYGAKVVVADLPSSDGENVA--KELGESCH----FAPTDVTSEADVQQAIQLATEKFG-PLNVAVNCAGIGIAVRTVSKKGPHPLDKFEKVLKVNTIGTFNVIRLVAEQMSQNEPNEGGERGVIINTASVAAYDGQIGQAAYSASKGAIVGMTLPIARDLSKHGIRVNTIAPGLFLTPLLISLPEKVRDELGKMVPFPSRLGDPPEFGHLVQSIIENPMLNGEVIRLDGALRMQP 259          
BLAST of NO11G03010 vs. NCBI_GenBank
Match: EAT38824.1 (AAEL009324-PB [Aedes aegypti])

HSP 1 Score: 276.2 bits (705), Expect = 1.100e-70
Identity = 154/259 (59.46%), Postives = 192/259 (74.13%), Query Frame = 0
Query:    5 HVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQELDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQRV--LGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVVVTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGLFKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEVIRLDGALRMPP 262
            +  ALVTG ASGLG+AT  RF + G++VVL DLP +K   +A  +EL  ++    VF  VDVL    V+  LD A +++G+ ++V VNCAG+AVA +     KK  H LE F +VL VN  GTFNVIRL+A  M    P+ +G RGV+V TAS+AAFDGQIGQAAYAASKAAV G+TLP+ARDLS  G+R+ +IAPGLF TPML ALPE+V+  L +TVP P RLG+PSE+A+LV+SIVENPM+NGEVIRLDGALRM P
Sbjct:   48 NAVALVTGGASGLGRATVERFARTGSKVVLCDLPTSKGGDVA--KELGDNV----VFVPVDVLSEKDVTGALDIAKTKFGR-LDVTVNCAGVAVAVKTYNFNKKAAHKLEDFQRVLLVNTAGTFNVIRLSAGLMGENEPNQDGQRGVIVNTASVAAFDGQIGQAAYAASKAAVVGMTLPIARDLSTQGIRICTIAPGLFNTPMLQALPEKVRAFLAKTVPFPQRLGEPSEYALLVESIVENPMLNGEVIRLDGALRMMP 299          
The following BLAST results are available for this feature:
BLAST of NO11G03010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OWZ24632.13.900e-7358.24Short-chain dehydrogenase/reductase SDR [Phytophth... [more]
XP_002999173.12.000e-7257.473-hydroxyacyl-CoA dehydrogenase, putative [Phytoph... [more]
PKN58767.12.000e-7257.473-hydroxyacyl-CoA dehydrogenase [Deltaproteobacter... [more]
GAX96282.17.400e-7258.403-hydroxyacyl-CoA dehydrogenase, putative [Pythium... [more]
XP_024584607.12.800e-7157.203-hydroxyacyl-dehydrogenase type-2 isoform x1 [Pla... [more]
EAT38823.13.700e-7159.16AAEL009324-PA [Aedes aegypti][more]
WP_033099298.16.300e-7155.563-hydroxyacyl-CoA dehydrogenase [Thermoactinomyces... [more]
XP_001659937.26.300e-7159.163-hydroxyacyl-CoA dehydrogenase type-2 isoform X2 ... [more]
XP_022787060.18.200e-7157.533-hydroxyacyl-CoA dehydrogenase type-2-like isofor... [more]
EAT38824.11.100e-7059.46AAEL009324-PB [Aedes aegypti][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001951NSK001951Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G03010.1NO11G03010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591729gene_5203Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100116g18gene5585Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G03010.1NO11G03010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G03010 ID=NO11G03010|Name=NO11G03010|organism=Nannochloropsis oceanica|type=gene|length=1403bp
ATGGTGCTCAGTCACGTCACGGCCCTCGTCACCGGCGCGGCTTCGGGCCT
GGGCCAAGCCACAGCCCTGCGCTTCTTACAACAGgtaggcctcttttcca
cctggctccccttgtcctcctttcctcgctacatgctctgtacacacgac
acatggatccccctgaccccctatggttcctcagtcaagctcgaggggaa
actcactccaacctaccatgacaccaaaaagGGAGCTCGCGTTGTGCTGG
CAGATTTACCGGCCACCAAGCCTGCGGCATTGGCCTCTCTCCAAGAGCTT
GACCAGGACATGCGGGCTCGCGGCGTTTTCGCGGGAGTCGATgtatgtgt
tgggccggtgaaagtttgttgtgagcgtgcgtatgttgttcccctttcac
ctgctctctccatgccattgctatgcggatatccacaacccaaccacctc
ccaattctcttcgtcatcctccttcccccgcacctcctcatttcgtccat
cctttcccactgacagGTCCTCGACAGCTCCCTTGTCTCGGCGGGGCTGG
ATAGAGCTTCATCCCAATGGGGACAGACAGTAAATGTCGTGGTTAACTGC
GCAGGTATCGCCGTGGCCCAACGCGTACTTGGAAAGAAGGGGCCGCATTC
CTTAGAGGCTTTTCTCAAGgtcagtacaatggcggcggcaggagggagcg
gaggaagactttcagcgttacacacgcgcacacaagacaatgagaggtct
tgttttcatacttcatgatacttacctcttttcatcctcttccttctcat
cctcatccttctcctctccctcctcgttgcccactaaatgattttcttct
tttacctcctcctctggcgatagGTTTTGTCGGTGAATGCCGGAGGTACT
TTCAACGTCATCCGCCTCGCCGCAGAGAGgtaacgaccaagtctatctcg
cactccttccatcccaccctttctttcctcccccctaattcacctccttt
ccctccacattccccaagAATGAGCACTCAAGTCCCAGACAGCAACGGTA
TTCGCGGGGTCGTCGTTACCACGGCCAGCATCGCCGCCTTTGACGGTCAA
ATCGGCCAGGCTGCCTACGCCGCCTCCAAGGCCGCTGTTGCCGGTCTAAC
CCTCCCCCTTGCGCGTGATCTGTCTAGGGATGGCGTGAGGGTCGTCTCGA
TCGCGCCTGGATTATTCAAGACCCCAATGCTGGCAGCCCTGCCAGAACAG
GTCCAGAAAGAGCTAGGGAGAACTGTACCGTTGCCTAACAGGCTGGGGGA
TCCGTCGGAATTTGCAATGCTGGTGCAGTCTATCGTGGAGAATCCCATGA
TTAATGGGGAGGTGATCCGGTTGGATGGGGCGTTGCGGATGCCGCCATCT
TGA
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protein sequence of NO11G03010.1

>NO11G03010.1-protein ID=NO11G03010.1-protein|Name=NO11G03010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=263bp
MVLSHVTALVTGAASGLGQATALRFLQQGARVVLADLPATKPAALASLQE
LDQDMRARGVFAGVDVLDSSLVSAGLDRASSQWGQTVNVVVNCAGIAVAQ
RVLGKKGPHSLEAFLKVLSVNAGGTFNVIRLAAERMSTQVPDSNGIRGVV
VTTASIAAFDGQIGQAAYAASKAAVAGLTLPLARDLSRDGVRVVSIAPGL
FKTPMLAALPEQVQKELGRTVPLPNRLGDPSEFAMLVQSIVENPMINGEV
IRLDGALRMPPS*
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Synonyms
Publications