NO11G01570, NO11G01570 (gene) Nannochloropsis oceanica

Overview
NameNO11G01570
Unique NameNO11G01570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3981
Alignment locationchr11:523535..527515 -

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Properties
Property NameValue
DescriptionCysteine proteinase-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:523535..527515 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR036443Znf_RanBP2_sf
IPR013128Peptidase_C1A
IPR013201Prot_inhib_I29
IPR001876Znf_RanBP2
IPR000668Peptidase_C1A_C
Homology
BLAST of NO11G01570 vs. NCBI_GenBank
Match: XP_002305072.3 (zingipain-2 [Populus trichocarpa])

HSP 1 Score: 193.7 bits (491), Expect = 1.600e-45
Identity = 99/223 (44.39%), Postives = 136/223 (60.99%), Query Frame = 0
Query:  197 DLPAAVDWRVAKLNPDNVVAVTPVKNQAACGACWAFTTAAAVEGAVAVTTKVLNELSNQQLIDCVKQNEGCNGGDFDYAFKWVAQK-GLASSSDYTFTQSQGKCRANEFAVASQIKDAYETAP-CSKNGLMSIVARRPVAVAIDGSCEAFVQYRGGIYTENCGTDLNHAVTIVGYGTDEKSGTDYWIIKNSWGRRWGSSGYGLIARGIGK----CGVSNMEEY 414
            D+P ++DWR       N  AVTPVK+Q  CG CWAF+T AA+EG + + T  L  LS QQL+DC   N+GC GG  D AF+++ +  GL S  +Y +    G C + + A        YE  P  ++N L+  VA++PV+VA++G    F  Y+ G++  +CGT+LNHAVT +GYGTD   GTDYW++KNSWG  WG +GY  + RGIG     CGV+    Y
Sbjct:  123 DIPTSMDWR-------NDGAVTPVKDQGTCGCCWAFSTVAAIEGIIKLQTGNLISLSEQQLVDCTAGNKGCQGGHMDTAFQYIIRNGGLTSEDNYPYQGVDGTCSSEKAASTEAQITGYEDVPQNNENALLQAVAKQPVSVAVEGGGHDFQFYKSGVFEGDCGTNLNHAVTAIGYGTD-SDGTDYWLVKNSWGTSWGENGYMRMRRGIGSSEGLCGVAKDASY 337          
BLAST of NO11G01570 vs. NCBI_GenBank
Match: XP_024455058.1 (senescence-specific cysteine protease SAG12-like [Populus trichocarpa] >PNT39735.1 hypothetical protein POPTR_004G056500v3 [Populus trichocarpa])

HSP 1 Score: 193.0 bits (489), Expect = 2.700e-45
Identity = 99/223 (44.39%), Postives = 136/223 (60.99%), Query Frame = 0
Query:  197 DLPAAVDWRVAKLNPDNVVAVTPVKNQAACGACWAFTTAAAVEGAVAVTTKVLNELSNQQLIDCVKQNEGCNGGDFDYAFKWVAQK-GLASSSDYTFTQSQGKCRANEFAVASQIKDAYETAP-CSKNGLMSIVARRPVAVAIDGSCEAFVQYRGGIYTENCGTDLNHAVTIVGYGTDEKSGTDYWIIKNSWGRRWGSSGYGLIARGIGK----CGVSNMEEY 414
            D+P ++DWR       N  AVTPVK+Q  CG CWAF+T AA+EG + + T  L  LS QQL+DC   N+GC GG  D AF+++ +  GL S  +Y +    G C + + A        YE  P  ++N L+  VA++PV+VA++G    F  Y+ G++  +CGT+LNHAVT +GYGTD   GTDYW++KNSWG  WG +GY  + RGIG     CGV+    Y
Sbjct:  123 DIPTSMDWR-------NDGAVTPVKDQGTCGCCWAFSTVAAIEGIIKLQTGNLISLSEQQLVDCTAGNKGCQGGHMDTAFQYIIRNGGLTSEDNYPYQGVDGTCSSEKAASTEAQITGYEDVPQNNENALLQAVAKQPVSVAVEGGGHDFQFYKSGVFEGDCGTNLNHAVTAIGYGTD-SDGTDYWLVKNSWGTSWGENGYMRMRRGIGSSEGLCGVAMDASY 337          
BLAST of NO11G01570 vs. NCBI_GenBank
Match: XP_011008467.1 (PREDICTED: senescence-specific cysteine protease SAG12-like [Populus euphratica])

HSP 1 Score: 192.2 bits (487), Expect = 4.600e-45
Identity = 99/223 (44.39%), Postives = 136/223 (60.99%), Query Frame = 0
Query:  197 DLPAAVDWRVAKLNPDNVVAVTPVKNQAACGACWAFTTAAAVEGAVAVTTKVLNELSNQQLIDCVKQNEGCNGGDFDYAFKWVAQK-GLASSSDYTFTQSQGKCRANEFAVASQIKDAYETAP-CSKNGLMSIVARRPVAVAIDGSCEAFVQYRGGIYTENCGTDLNHAVTIVGYGTDEKSGTDYWIIKNSWGRRWGSSGYGLIARGIGK----CGVSNMEEY 414
            D+P ++DWR       N  AVTPVK+Q  CG CWAF+T AA+EG + + T  L  LS QQL+DC   N GC+GG  D AF+++ +  GLAS  +Y +    G C + + +        YE  P  ++N L+  VA++PV+V +DG  + F  Y+ G++  +CGT+ NHAVT +GYGTD   GTDYW++KNSWG  WG SGY  + RGIG     CGV+    Y
Sbjct:   88 DIPTSMDWR-------NAEAVTPVKDQGRCGCCWAFSTVAAIEGIIKLKTGKLISLSEQQLVDCDVGNNGCHGGFMDNAFQYIIRNGGLASEDNYPYQGVDGTCNSEKASSIEAEITGYEDVPQNNENALLQAVAKQPVSVVVDGGGQDFQFYKSGVFKGDCGTEQNHAVTAIGYGTD-SDGTDYWLVKNSWGTSWGESGYMRMQRGIGASEGLCGVAMDASY 302          
BLAST of NO11G01570 vs. NCBI_GenBank
Match: XP_024455022.1 (senescence-specific cysteine protease SAG12-like [Populus trichocarpa] >PNT39732.1 hypothetical protein POPTR_004G056300v3 [Populus trichocarpa] >PNT39733.1 hypothetical protein POPTR_004G056300v3 [Populus trichocarpa])

HSP 1 Score: 191.4 bits (485), Expect = 7.800e-45
Identity = 99/223 (44.39%), Postives = 135/223 (60.54%), Query Frame = 0
Query:  197 DLPAAVDWRVAKLNPDNVVAVTPVKNQAACGACWAFTTAAAVEGAVAVTTKVLNELSNQQLIDCVKQNEGCNGGDFDYAFKWVAQK-GLASSSDYTFTQSQGKCRANEFAVASQIKDAYETAP-CSKNGLMSIVARRPVAVAIDGSCEAFVQYRGGIYTENCGTDLNHAVTIVGYGTDEKSGTDYWIIKNSWGRRWGSSGYGLIARGIGK----CGVSNMEEY 414
            D+P ++DWR       N  AVTPVK+Q  CG CWAF+T AA+EG + + T  L  LS QQL+DC   N+GC GG  D AF+++ +  GL S  +Y +    G C + + A        YE  P  ++N L+  VA++PV+VA+DG    F  Y+ G++  +CGT+LNH VT +GYGTD   GTDYW++KNSWG  WG +GY  + RGIG     CGV+    Y
Sbjct:  123 DIPTSMDWR-------NDGAVTPVKDQGTCGCCWAFSTVAAIEGIIKLQTGNLISLSEQQLVDCTAGNKGCQGGLMDTAFQYIIRNGGLTSEDNYPYQGVDGTCSSEKAASTEAQITGYEDVPQNNENALLQAVAKQPVSVAVDGGGNDFRFYKSGVFEGDCGTNLNHGVTAIGYGTD-SDGTDYWLVKNSWGTSWGENGYMRMRRGIGSSEGLCGVAMDASY 337          
BLAST of NO11G01570 vs. NCBI_GenBank
Match: XP_002305073.3 (senescence-specific cysteine protease SAG12 [Populus trichocarpa] >PNT39728.1 hypothetical protein POPTR_004G056100v3 [Populus trichocarpa] >PNT39729.1 hypothetical protein POPTR_004G056100v3 [Populus trichocarpa])

HSP 1 Score: 190.7 bits (483), Expect = 1.300e-44
Identity = 99/223 (44.39%), Postives = 135/223 (60.54%), Query Frame = 0
Query:  197 DLPAAVDWRVAKLNPDNVVAVTPVKNQAACGACWAFTTAAAVEGAVAVTTKVLNELSNQQLIDCVKQNEGCNGGDFDYAFKWVAQK-GLASSSDYTFTQSQGKCRANEFAVASQIKDAYETAP-CSKNGLMSIVARRPVAVAIDGSCEAFVQYRGGIYTENCGTDLNHAVTIVGYGTDEKSGTDYWIIKNSWGRRWGSSGYGLIARGI----GKCGVSNMEEY 414
            D+P ++DWR       N  AVTPVK+Q  CG CWAF+T AA+EG + + T  L  LS QQL+DC   N+GC GG  D AF+++ +  GL S  +Y +    G C + + A        YE  P  ++N L+  VA++PV+VA+DG    F  Y+ G++  +CGT+LNH VT +GYGTD   GTDYW++KNSWG  WG +GY  + RGI    G CGV+    Y
Sbjct:  123 DIPTSMDWR-------NDGAVTPVKDQGTCGCCWAFSTVAAIEGIIKLQTGNLISLSEQQLVDCTAGNKGCQGGLMDTAFQYIIRNGGLTSEDNYPYQGVDGTCSSEKAASTEAQITGYEDVPQNNENALLQAVAKQPVSVAVDGGGNDFRFYKSGVFEGDCGTNLNHGVTAIGYGTD-SDGTDYWLVKNSWGTSWGENGYMRMRRGIDSSEGLCGVAMDASY 337          
BLAST of NO11G01570 vs. NCBI_GenBank
Match: AKA58504.1 (dionain-1 precursor [Dionaea muscipula])

HSP 1 Score: 190.3 bits (482), Expect = 1.700e-44
Identity = 106/257 (41.25%), Postives = 144/257 (56.03%), Query Frame = 0
Query:  167 HERSEEDAKEEAADGTYPVPPEWAKELMPRDLPAAVDWRVAKLNPDNVVAVTPVKNQAACGACWAFTTAAAVEGAVAVTTKVLNELSNQQLIDCVK--QNEGCNGGDFDYAFKWVA-QKGLASSSDYTFTQ---SQGKCRANEFAVASQIKDAYETAPCSKNGLMSIVARRPVAVAIDGSCEAFVQYRGGIYTENCGTDLNHAVTIVGYGTDEKSGTDYWIIKNSWGRRWGSSGYGLIARGI----GKCGVSNMEEY 414
            H   +   KE+A+    P P  +       D+PAAVDWR A        AVTPVKNQ  CG CWAF+  AA+EGA  + T  L  LS +Q++DC     ++GCNGG  D AF++V   +G+ + SDY +T    S G C A+ +  A+ I    +    ++  L    A +P++VAID S  +F  Y  GIY+  C T+L+HAVT+VGYGTD  SG  YWI+KNSWG  WG  GY  +  G+    G CG++    Y
Sbjct:  106 HNGYKRPLKEQASSNLRPSPFNFT------DVPAAVDWRTAG-------AVTPVKNQQQCGCCWAFSAVAAIEGATQIKTGTLTSLSEEQIVDCDTNGNDKGCNGGTPDGAFQYVVNNQGIDTESDYPYTAGGGSPGTCSASSYQPAASITGYQDVPANNEQALQQAAATQPISVAIDASDPSFQSYSSGIYSGPCNTNLDHAVTVVGYGTDPNSGNSYWIVKNSWGTSWGQEGYIWMQMGLNAPYGVCGIAMQASY 349          
BLAST of NO11G01570 vs. NCBI_GenBank
Match: XP_002877667.1 (ervatamin-B [Arabidopsis lyrata subsp. lyrata] >EFH53926.1 hypothetical protein ARALYDRAFT_348033 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 189.9 bits (481), Expect = 2.300e-44
Identity = 123/370 (33.24%), Postives = 191/370 (51.62%), Query Frame = 0
Query:   50 SPPSGSSSNGSITAPCSLENFEAFCEEFHKDYTANPKELARRFQAWSKSCIYLENYKVEHPDASFHMAYNHLSDRLPEEHEAMFGYKVKPRAGRVTPSSLSDSINNITHRGLQGFHKHERSEEDAKEEAADGTYPVPPEWAKELMPRDLPAAVDWRVAKLNPDNVVAVTPVKNQAACGACWAFTTAAAVEGAVAVTTKVLNELSNQQLIDCVKQNEGCNGGDFDYAFKWVAQ-KGLASSSDYTFTQSQGKCRANEFAVASQIKDAYETAPCS-KNGLMSIVARRPVAVAIDGSCEAFVQYRGGIYTENCGTDLNHAVTIVGYGTDEKSGTDYWIIKNSWGRRWGSSGYGLIARGI----GKCGVSNMEEY 414
            S  SG++S G +    ++E  E +   FH+ Y ++  E   RF+ + K+  ++E++ + + + ++ +  N  SD   EE +A +   V P    +T  S +DS   ++ R       +E   E  +                         ++DWR          AVT VK+Q  CG CWAF+  AAVEG   +    L  LS QQL+DC  +N+GC+GG    AF ++ + +G+ +  +Y +  +Q  C +N  A A+     YET P + +  L+  V+++PV+VAI+GS   F+ Y GGI+   CGT LNHAVTIVGYG  E+ G  YW++KNSWG  WG  GY  I R +    G CG++++  Y
Sbjct:   15 SRTSGATSRGGLFEASAIEKHEQWMSRFHRVY-SDDSEKTSRFEIFKKNLKFVESFNM-NTNKTYTLDVNEFSDLTDEEFKARYTGLVVPEG--MTRMSTTDSHETVSFR-------YENVGETGE-------------------------SMDWR-------EEGAVTSVKHQQQCGCCWAFSAVAAVEGMTKIAKGELVSLSEQQLLDCSTENDGCDGGIMWKAFDYIVENQGITAEDNYPYQGAQQTCESNHVAAAT--ISGYETVPQNDEEALLKAVSQQPVSVAIEGSGYEFIHYSGGIFNGECGTHLNHAVTIVGYGVSEE-GIKYWLLKNSWGESWGEDGYMRIMRDVDAPQGMCGLASLAYY 338          
BLAST of NO11G01570 vs. NCBI_GenBank
Match: XP_006421532.1 (ervatamin-B [Citrus clementina] >ESR34772.1 hypothetical protein CICLE_v10005342mg [Citrus clementina])

HSP 1 Score: 189.9 bits (481), Expect = 2.300e-44
Identity = 126/378 (33.33%), Postives = 186/378 (49.21%), Query Frame = 0
Query:   42 LVTSSSSISPPSGSSSNGSITAPCSLENFEAFCEEFHKDYTANPKELARRFQAWSKSCIYLENYKVEHPDASFHMAYNHLSDRLPEEHEAMF-GYKVKPRAGRVTPSSLSDSINNITHRGLQGFHKHERSEEDAKEEAADGTYPVPPEWAKELMPRDLPAAVDWRVAKLNPDNVVAVTPVKNQAACGACWAFTTAAAVEGAVAVTTKVLNELSNQQLIDC-VKQNEGCNGGDFDYAFKWVAQKGLASSSDYTFTQSQGKCRANEFAVASQIKDAYETAPCSKNGLMSIVARRPVAVAIDGSCEAFVQYRGGIYTENCGTDLNHAVTIVGYGTDEKSGTDYWIIKNSWGRRWGSSGYGLIARGI----GKCGVSNMEEY 414
            LVT SS +   +G     S+  P  +E  E +  E  + Y  +  E   RF+ + ++  Y+E    E  + ++ +  N  SD   EE  A + GY+V        PS  S S  + T        K++                            D+P ++DWR          AVTP+KNQ  CG CWAF+  AAVEG   +++  L  LS QQ++DC +  N GC GG  D AFK++  +G+A+ +DY + + QG C   +  VA++I +  +  P  +  L+  VA +PV++ I+GS   F  Y+GGI+   CGT  +HAV IVG+G  E  G  YW+IKNSWG  WG +GY  I R +    G CG++    Y
Sbjct:   15 LVTYSSKMVSVAGR----SLHEPSIVEKHEKWMAEHGRTY-KDDLEKEMRFKIFKENLEYIEKAN-EEANRTYKLGTNEFSDLTNEEFRASYTGYRV--------PSQSSSSRQSTT-----ASFKYQNL-------------------------TDVPTSMDWR-------EKGAVTPIKNQGQCGDCWAFSAVAAVEGVTEISSGNLIPLSEQQILDCSIDGNRGCGGGWMDNAFKYIINQGIATEADYPYKEVQGTCEDAQVKVAAKISNFVDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATE-DGMKYWLIKNSWGESWGEAGYMRILRDVEAPEGLCGIATKPSY 340          
BLAST of NO11G01570 vs. NCBI_GenBank
Match: XP_011014388.1 (PREDICTED: senescence-specific cysteine protease SAG12-like [Populus euphratica])

HSP 1 Score: 189.5 bits (480), Expect = 3.000e-44
Identity = 98/223 (43.95%), Postives = 135/223 (60.54%), Query Frame = 0
Query:  197 DLPAAVDWRVAKLNPDNVVAVTPVKNQAACGACWAFTTAAAVEGAVAVTTKVLNELSNQQLIDCVKQNEGCNGGDFDYAFKWVAQK-GLASSSDYTFTQSQGKCRANEFAVASQIKDAYETAP-CSKNGLMSIVARRPVAVAIDGSCEAFVQYRGGIYTENCGTDLNHAVTIVGYGTDEKSGTDYWIIKNSWGRRWGSSGYGLIARGIGK----CGVSNMEEY 414
            D+P ++DWR       N  AVTPVK+Q  CG+CWAF+  AA+EG + + T  L  LS QQL+DC   N+GC GG  D AF+++ +K GL S  +Y +    G C + + A        YE  P  ++N L+  VA++PV+V IDG  + F  Y+ G++  +CG + NHAVT +G+GTD   GTDYW++KNSWG  WG SGY  + RGIG     CGV+    Y
Sbjct:  123 DIPTSMDWR-------NAEAVTPVKDQGRCGSCWAFSAVAAIEGIIKLKTGKLISLSEQQLVDCNAGNKGCQGGFMDTAFQYIIRKGGLTSEENYPYQGVDGTCNSEKAASIEAEITGYEDVPQNNENALLQAVAKQPVSVGIDGGGQDFQFYKSGVFKGDCGAEQNHAVTAIGFGTD-SDGTDYWLVKNSWGTSWGESGYMRMQRGIGASEGLCGVAMDASY 337          
BLAST of NO11G01570 vs. NCBI_GenBank
Match: APM86431.1 (dionain 2 [Dionaea muscipula])

HSP 1 Score: 189.5 bits (480), Expect = 3.000e-44
Identity = 106/257 (41.25%), Postives = 143/257 (55.64%), Query Frame = 0
Query:  167 HERSEEDAKEEAADGTYPVPPEWAKELMPRDLPAAVDWRVAKLNPDNVVAVTPVKNQAACGACWAFTTAAAVEGAVAVTTKVLNELSNQQLIDCVK--QNEGCNGGDFDYAFKWVA-QKGLASSSDYTFTQ---SQGKCRANEFAVASQIKDAYETAPCSKNGLMSIVARRPVAVAIDGSCEAFVQYRGGIYTENCGTDLNHAVTIVGYGTDEKSGTDYWIIKNSWGRRWGSSGYGLIARGI----GKCGVSNMEEY 414
            H   +   KE+A+    P P  +       D+PAAVDWR A        AVTPVKNQ  CG CWAF+  AA+EGA  + T  L  LS +Q++DC     + GCNGG  D AF++V   +G+ + SDY +T    S G C A+ +  A+ I    +    ++  L    A +P++VAID S  +F  Y  GIY+  C T+L+HAVT+VGYGTD  SG  YWI+KNSWG  WG  GY  +  G+    G CG++    Y
Sbjct:  106 HNGYKRPLKEQASSNLRPSPFNFT------DVPAAVDWRTAG-------AVTPVKNQQQCGCCWAFSAVAAIEGATQIKTGTLTSLSEEQIVDCDTNGNDNGCNGGTPDGAFQYVVNNQGIDTESDYPYTAGGGSPGTCSASSYQPAASITGYQDVPANNEQALQQAAATQPISVAIDASDPSFQSYSSGIYSGPCNTNLDHAVTVVGYGTDPDSGNSYWIVKNSWGTSWGQEGYIWMQMGLNAPYGVCGIAMQASY 349          
The following BLAST results are available for this feature:
BLAST of NO11G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002305072.31.600e-4544.39zingipain-2 [Populus trichocarpa][more]
XP_024455058.12.700e-4544.39senescence-specific cysteine protease SAG12-like [... [more]
XP_011008467.14.600e-4544.39PREDICTED: senescence-specific cysteine protease S... [more]
XP_024455022.17.800e-4544.39senescence-specific cysteine protease SAG12-like [... [more]
XP_002305073.31.300e-4444.39senescence-specific cysteine protease SAG12 [Popul... [more]
AKA58504.11.700e-4441.25dionain-1 precursor [Dionaea muscipula][more]
XP_002877667.12.300e-4433.24ervatamin-B [Arabidopsis lyrata subsp. lyrata] >EF... [more]
XP_006421532.12.300e-4433.33ervatamin-B [Citrus clementina] >ESR34772.1 hypoth... [more]
XP_011014388.13.000e-4443.95PREDICTED: senescence-specific cysteine protease S... [more]
APM86431.13.000e-4441.25dionain 2 [Dionaea muscipula][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002106NSK002106Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01570.1NO11G01570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591209gene_5043Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100049g37gene5441Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01570.1NO11G01570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01570 ID=NO11G01570|Name=NO11G01570|organism=Nannochloropsis oceanica|type=gene|length=3981bp
ATTCGGGCGAGGCCGAGGGAGCTGGGATCTTTATCATGCTGTGGCACTTG
TTTGCGGCGCACACAGCGGTAACAACTTCACATCCATGGGCCGGTCGCCT
TCGTGTTTGTTCTTTGCCCCCCCCCCTGCCTGCCCTTCCACACGACCAAG
AGGACCCCCCGAGGCTTAACCCTACCAAACCCACACAGGCAACTCAAACC
TCACCTGTCAACCCCATGCACACCTACCCTTCTCACAGCAAGGAGCATGC
AGGCCTTTGCAGGCCCATGCTGGAGCCAGACCCCTGGCGGTTGCGCCACA
ACACCTCGCATCGCCTCCTTCGGTGTCCACCTCGTCGTCTGTTTCGCGCT
CCTATTTGCAGCTCCAAGACTGGTCACATCATCGTCGTCAATATCACCAC
CAAGTGGCAGCAGCAGCAACGGCAGCATAACTGCACCGTGTAGCCTGGAG
AACTTCGAGGCATTTTGCGAGGAGTTCCACAAGGACTACACCGCCAACCC
AAAAGAGCTAGCCCGGCGCTTCCAGGCCTGGAGCAAGTCCTGTATTTATT
TGGAAAATTATAAAGTGGAGCATCCTGACGCCTCTTTTCACATGGCTTAC
AATCACCTGAGTGACCGCTTGCCAGAGGAACACGAGGCCATGTTCGGGTA
CAAGGTGAAGCCGCGGGCAGGGCGTGTCACGCCTTCTTCTCTCTCTGACA
GTATCAACAACATTACCCACCGAGGCCTGCAAGGTTTCCACAAACACGAG
CGGTCCGAAGAGGATGCAAAAGAAGAAGCAGCCGACGGCACGTATCCCGT
CCCTCCCGAGTGGGCGAAGGAGCTCATGCCCCGAGACTTACCCGCTGCTG
TGGACTGGCGGGTGGCCAAACTAAACCCTGATAATGTTGTTGCCGTGACA
CCTGTCAAAAATCAAGCTGCCTGTGGTGCTTGTTGGGCGTTTACGACAGC
CGCGGCGGTGGAGGGAGCGGTGGCGGTCACAACGAAAGTTCTAAATGAAT
TGAGTAATCAGCAATTGATTGATTGTGTGAAGCAGAATGAGGGGTGTAAC
GGCGGAGATTTTGACTACGCATTCAAGTGGGTCGCGCAGAAAGGCTTGGC
GTCTTCATCAGATTACACATTTACTCAAAGCCAGGGAAAATGTCGGGCGA
ATGAATTCGCGGTCGCCTCGCAGATCAAAGATGCATATGAGACGGCTCCG
TGCAGTAAGAATGGGTTAATGAGCATCGTGGCACGCCGGCCTGTGGCTGT
TGCCATTGATGGATCTTGTGAGGCATTTGTTCAGTATCGGGGAGGGATAT
ACACGGAGAATTGTGGGACTGATCTGAATCATGCGGTGACGATTGTGGGG
TATGGAACGGATGAAAAGTCGGGAACTGATTACTGGgtacgtgtgggagg
ggaagggggagggttggcgttcgcagcatggaggcttctcttcatgcttc
caagcgtgaggaatggttgtttctgtttattactttgtcatgcactttca
attgtcgagcccttattccgccttatttaaaaaaaatacagATCATCAAA
AACAGTTGGGGTAGGCGCTGGGGTTCCTCTGGCTACGGACTGATCGCCCG
CGGGATAGGGAAATGCGGCGTGAGCAATATGGAGGAGTATGGTTATTATG
CTGCTGGAGGTATTGCTTTTGTGAATGGGACGGGTTTTTTCAGTGATGAT
GCCTTGGCACAAGACCCGAATGTCGGTTTCTTCGATCAGATTTTACAGTG
GAAATACCTAAGTGTTGTCTTGGGCATTGCGATCGCTCTATTGGCGTTCC
CGATTATCATGTCATTCTTACGCGCGTTACACCGATGCTGTTGCGGGGCA
CCAGCAGGAGGAAAAGGAAGAGGGAGGGGAGGGCGGCAAATGGGCTCTCC
CAACGGTGCAGCACCTGCGATGGTGGTGCCGATCGGTAGTGGTGGAGGGG
GAGGACGAACGCCTCCCTCGCGTTCTCCTGGAGGGGATCGAGGCCCTCCT
CCTCGGTCTCCTCCAAAAATTTCATCCCGAAATTCTCCACTACCACCGCC
GCCGCCGCCGACAGTGCCAGGCACAGAAATGGCAAGTGAGTGGGCTTGTC
CGGCGTGTACGTTCTTCAATGCCCCGCATATGAGTGTGTGTCAGATTTGT
GGGCATCGAAATTAGGAGGGAAACGAAAACAAAAGAAGGAGAGGAAAGGG
TCACAGTGGATAATAGTTGTAGAGGTAACTAGAGAAGTTGGAGTATGAGA
AGAATGAATCGTTTGTCTTCTTCCTTGTGGGACGAGGAATGGACCAAGAC
GGACAATCTTTGGGTGAAGAAGGAAAAGGCGGCATGGAGGAACATGAATG
AATACCTGGATGGCAGGGAAATAAGTAAAATGAATATGCAAAATAACCTA
CGGGCTTGAGATAGAAATAAGTAACAGGCAAAAAATGCATAAACTCAAAA
GACCGGGGTAACGGCTCTCATGTCTCAAAGGAAGTCTTGAATCATGCAAT
GTTTCTTTGCCTTTCTATCGCTCTATATGTAACATGCTTTTAATGTCTTG
ATTCTCTACCAAAGACTAGTCCTAGCCCCCTTCCTCCACCTCTTCTTCCT
CCCCCTCCGTCACAATCTCAATCTCTCCCGTCGCCAAGGCCATAATACCT
TGAAACAAGAGAAAGAATCCGACAACCCCACCAACCACCGTCAACCAAAT
CACATTCTCCTTGTGCCTCGCCCGTTCCTCTTCCAATTCCTCCGCCTTCT
TCCCCCCTTCCGGGCCAGCAGCCGTTGTGCCTGCTTGTTTCTTTCCAACC
CCACCGACGCCGCCTTTTGGCCCTTCACCTTCTTCTAAGAATTTGTGAAG
CATTGGCTCGGGGACTAAGGGGGCCTCAGCGCACAATTTAGCGGCTTTAA
CTTGATTGAATGGGTTGCGGCTGTTGACGTAGTCGGCGCGTTTGTAATAC
TCCTTTACATTGGACGCCACCACAAAACCTTGCTGTTGCTGCTGCTCTGC
AGAAGAGGCTACTGTTGCACTTCCAATCTCAAAAAACTCCTCGGCAATAC
GTCTGAAAAAACGCATGAGATTTCCAAACGTACTCACTATCACCAAAACA
TTCACATCGGCCAACGCTTCTACTAGGTGCCCGAATAAACACGCATCAAA
ACTCGTAGGTTCTCGTCCAAAGAAGAAATCCCCCGTACTTGCCCCCAGCC
AGTTATCCAACTCACGATATACGACACGCGCTCTCGCCAACAGCTCCCCC
AGACCCACCCCTCCCTCCACCAGCCCCCTCCAGCGTTGCTCCGCCATACC
ACGCCGCCGCTCAGCACTCGCCCACGTCGGACCAAGCGGAAAGCGGGTGG
CCCTCAAAATGACATCGCGAACATTCTGGACAAAATTCCTCTCGTCCCGA
TACCGGGAGGCACCTAGCGCAGGGGCCAACTTTTCGGAGACTAAGGCATG
CAAAGCAGAGACTTGTGCTCGCTTTGCGCCAGAGAGTTTGCTGTCTAGGT
CGAGGCTGGAGGGGTAATGCTCGCGAAGATATGCCAACGCATCGTCTTCA
GGTATAATAAATTGCCCATCTATCAATACGGGGAGGCGACCGGCCGTCTC
GAGGAATGGGTATTCGAGATTTCGCACCACGTAGGGGGCGCGAACGAAAC
GCAGGTAGAGTTGCAGAGCAAATGCTGGGCGAAATTGGAGGAGGATGAGC
GGTTGTTTTCCCTCGGCGTGGGCTTTGATGGGGTTGGGGTCGACAGCGTG
TCCAGGGCAAAGGGAGGAGGTATGTGCGCCTAGGGGGTTCTTGGAGAAGT
CGCTTTCGAAGAAGTCAGCGGAGGAGAACATGGCGTGGGGGCTACAACGT
GTGGGTGAGTGGGAGTGGATATCGGTGGTGATTGTAAGGAGCGGTGATGC
TTGTCATGGTTGCACAAGGCTTGTGACTTACACTGTGGTGACAAGGCAGC
AAGCATCTGAATTAAAAAAATATGCGCGAAG
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protein sequence of NO11G01570.1

>NO11G01570.1-protein ID=NO11G01570.1-protein|Name=NO11G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=588bp
MQAFAGPCWSQTPGGCATTPRIASFGVHLVVCFALLFAAPRLVTSSSSIS
PPSGSSSNGSITAPCSLENFEAFCEEFHKDYTANPKELARRFQAWSKSCI
YLENYKVEHPDASFHMAYNHLSDRLPEEHEAMFGYKVKPRAGRVTPSSLS
DSINNITHRGLQGFHKHERSEEDAKEEAADGTYPVPPEWAKELMPRDLPA
AVDWRVAKLNPDNVVAVTPVKNQAACGACWAFTTAAAVEGAVAVTTKVLN
ELSNQQLIDCVKQNEGCNGGDFDYAFKWVAQKGLASSSDYTFTQSQGKCR
ANEFAVASQIKDAYETAPCSKNGLMSIVARRPVAVAIDGSCEAFVQYRGG
IYTENCGTDLNHAVTIVGYGTDEKSGTDYWIIKNSWGRRWGSSGYGLIAR
GIGKCGVSNMEEYGYYAAGGIAFVNGTGFFSDDALAQDPNVGFFDQILQW
KYLSVVLGIAIALLAFPIIMSFLRALHRCCCGAPAGGKGRGRGGRQMGSP
NGAAPAMVVPIGSGGGGGRTPPSRSPGGDRGPPPRSPPKISSRNSPLPPP
PPPTVPGTEMASEWACPACTFFNAPHMSVCQICGHRN*
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Synonyms
Publications