NO11G01540, NO11G01540 (gene) Nannochloropsis oceanica

Overview
NameNO11G01540
Unique NameNO11G01540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3537
Alignment locationchr11:513803..517339 -

Link to JBrowse

Properties
Property NameValue
DescriptionDNA primase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:513803..517339 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003896DNA primase activity
GO:0003677DNA binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: INTERPRO
TermDefinition
IPR013264DNA_primase_core_N
IPR006171Toprim_domain
IPR002694Znf_CHC2
Homology
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_079101652.1 (DNA primase, partial [Streptomyces pathocidini])

HSP 1 Score: 250.4 bits (638), Expect = 2.600e-62
Identity = 145/331 (43.81%), Postives = 189/331 (57.10%), Query Frame = 0
Query:   75 DVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNAL-PSSGGTVVLVLDGDAAGRKAAER 405
            D V+ VR +V    VV +++ L + G G   G CPFHD+ SPS  VS  KG+++CF C A GD   FV   + +SF EAVE LA + GI +  E     GG   G  +   +RL +A +AA+ +Y   LG     + R  L ER      A  F +GY+PA    L++ LR    ++ EL+ SGL       A    R P DR  GRL+ PIR+  G++VGF  R L E +   KY+NTPETP++KK +VLYG++ A+  + K   AVVVEGY DVMA H A V  A+A  GTA   DHVK LR  L  +SG  VV   DGDAAG+KAA R
Sbjct:    8 DDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGLFYCFGCQAGGDTLDFVMRVDHLSFSEAVERLASQAGITLRYE----EGGYTPGRQQGERIRLVEAHKAAAVFYVEQLGGAEAEIGRKFLAERGFDQAAAQHFGVGYAPAGWDHLVRFLRGRGFSDKELILSGL-------AQDGRRGPIDRFRGRLMWPIRDITGEVVGFGARKLREDDNGPKYLNTPETPLYKKSHVLYGIDLAKKDIAKTNRAVVVEGYTDVMACHLAGVTTAIATCGTAFGGDHVKILRRLLMDNSGAEVVFTFDGDAAGQKAALR 327          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_061965367.1 (DNA primase [Demequina aurantiaca])

HSP 1 Score: 250.0 bits (637), Expect = 3.400e-62
Identity = 143/344 (41.57%), Postives = 183/344 (53.20%), Query Frame = 0
Query:   69 AAADGKDVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNALPSSGGT----------VVLVLDGDAAGRKAA 403
            A    +D +  VR      D++ QHV L+  G G   G CPFHD+ SPS  V    G +HCF CG  GDV +FV   +G+ F EAVEYLAE   + +    ++ GGG           RL  A   A+E++ S LG      AR  LL R      A  F +GY+P     LL HLR    TE EL  SGL +       +  R   DR  GRLV PIR+  G+ +GF  R L+E ++  KY+NTPET ++KK NVLYGL+ A+  +R +   VVVEGY DVMA H A +KNAVA  GTA   DHVK +R  +  +GG           V+   DGD AG+ AA
Sbjct:    2 AGTINRDDIATVRERAPIEDIIGQHVTLKSAGVGSLKGLCPFHDERSPSFHVRPAAGRWHCFGCGEGGDVIEFVMRMDGLPFAEAVEYLAERSNVTL---RYEAGGGPRKEGTAGLRKRLLDAHRVAAEFFVSQLGTPEAKTARDFLLGRGFGQEAAATFGVGYAPQGWSSLLDHLRSNGFTEPELRASGLVS-------EGQRGIYDRFRGRLVWPIRDVTGEPIGFGARKLYEDDQGPKYLNTPETALYKKSNVLYGLDLAKGAIRSERTVVVVEGYTDVMACHLAGIKNAVATCGTAFGEDHVKVVRRLMGDTGGAQLKVGSTGAKVIFTFDGDEAGQNAA 335          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: PLW72204.1 (DNA primase, partial [Streptomyces sp. DJ])

HSP 1 Score: 250.0 bits (637), Expect = 3.400e-62
Identity = 144/332 (43.37%), Postives = 188/332 (56.63%), Query Frame = 0
Query:   77 VELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANR-APSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNALPSSG---GTVVLVLDGDAAGRKAAER 405
            ++ VR +V    VV +++ L + G G   G CPFHD+ SPS  VS  KG+YHCF CG  GD   FV + E +SF E VE LA + GI +  E  + GGG   G  K    RL +A +AA+++Y   L      + R  L ER      A  F +GY+PA    L++ LR    T+ ELV SGL       A ++ R +P DR  GRL+ PI++  G++VGF  R L E ++  KY+NTPETPIFKK   LYG+  A+  + K    VVVEGY DVMA H A V  AVA  GT+   DH+K LR  L  +    G V+   DGDAAG+KAA R
Sbjct:   10 IKAVRDAVPIDSVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGLYHCFGCGEGGDTIAFVMKLEHLSFAETVERLAAQAGITLRYE--ESGGGYTPGHRKGERTRLVEAHQAAAQFYLEQLDGAEAEIGRRFLAERGFDQATARHFEVGYAPAGWDHLVRFLRGRGFTDKELVVSGL-------AQESRRGSPIDRFRGRLMWPIKDITGEVVGFGARRLREDDQGPKYLNTPETPIFKKSQHLYGINLAKRDIAKSLRVVVVEGYTDVMACHAAGVTTAVATCGTSFGDDHIKVLRRLLMDTSELKGEVIFTFDGDAAGQKAATR 332          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: PVC70374.1 (DNA primase [Streptomyces sp. CS081A])

HSP 1 Score: 250.0 bits (637), Expect = 3.400e-62
Identity = 152/368 (41.30%), Postives = 198/368 (53.80%), Query Frame = 0
Query:   75 DVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNALPSSGGT-VVLVLDGDAAGRKAAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADL 442
            D V+ VR +V    VV +++ L + G G   G CPFHD+ SPS  VS  KG++HCF C   GD   FV + + +SF E VE LA + GI +  E     GG   G  +   +RL +A + A+ YYA  LG     + R  L ER      A  F +GYSPA    L + LR    ++ EL+ SGL       +    R P DR  GRL+ PI++  G++VGF  R L + +   KY+NTPETPI+KK  VLYG++ A+  + K   AVVVEGY DVMA H A V  A+A  GTA   DHVK LR  L  +G   V+   DGDAAG+KAA R         E + K A     +A  P+G    DP DL
Sbjct:    8 DDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGLFHCFGCQEGGDTIAFVMKIDHLSFSETVERLAAKAGITLRYE----EGGYNPGHQRGERIRLIEAHQVAARYYADQLGSAEAEIGRKFLAERGFDQAAAEHFGVGYSPAGWDHLTRFLRGKGFSDKELILSGL-------SQDGRRGPIDRFRGRLMWPIKDVGGEIVGFGARKLRDDDNGPKYLNTPETPIYKKSQVLYGIDLAKKEIAKSSRAVVVEGYTDVMACHLAGVTTAIATCGTAFGSDHVKILRRLLMDNGSARVIFTFDGDAAGQKAALRA-------FEDDQKFAA-ETYIAVAPEG---MDPCDL 353          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_030545534.1 (DNA primase [Streptomyces albus])

HSP 1 Score: 249.6 bits (636), Expect = 4.500e-62
Identity = 144/331 (43.50%), Postives = 187/331 (56.50%), Query Frame = 0
Query:   75 DVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNAL-PSSGGTVVLVLDGDAAGRKAAER 405
            D V+ VR +V    VV +++ L   G G   G CPFHD+ SPS  VS  KG+Y+CF C   GD   FV + + +SF EAVE LA + GI +  E     GG   G  +   +RL +A  AA+ YYA  LG     + R  L ER      A  F +GYSPA    L++ LR    T+ EL+ SGL       A    R P DR  GRL+ PIR+  G+++GF  R L E +   KY+NTPETP+++K  VLYG++ A+  + K   AVVVEGY DVMA H A V  A+A  GT+   +H+K LR  L  +SG  VV   DGDAAG+KAA R
Sbjct:    8 DDVKAVRDAVPIDAVVSEYLQLRSAGGGNLKGLCPFHDEKSPSFQVSPSKGLYYCFGCQEGGDTLDFVMKLDHLSFSEAVERLAAQAGITLRYE----EGGYNPGRQQGEKIRLVEAHRAAARYYAEQLGGAEAEIGRKFLAERGFDQAAAEHFGVGYSPAGWDHLVRFLRGKGFTDKELILSGL-------AQDGRRGPIDRFRGRLMWPIRDITGEVIGFGARKLREDDNGPKYLNTPETPLYRKSQVLYGIDLAKKDIAKGSRAVVVEGYTDVMACHLAGVTTAIATCGTSFGGEHIKILRRLLMDNSGAEVVFTFDGDAAGQKAALR 327          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_042212981.1 (DNA primase [Lysinimicrobium mangrovi])

HSP 1 Score: 249.6 bits (636), Expect = 4.500e-62
Identity = 144/344 (41.86%), Postives = 183/344 (53.20%), Query Frame = 0
Query:   69 AAADGKDVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNALPSSGGT----------VVLVLDGDAAGRKAA 403
            A    +D +  VR      D++ QHV L+  G G   G CPFHD+ SPS  V    G +HCF CG  GDV +FV   +G+ F EAVEYLAE  G+ +    ++ GG  +S +      RL +A   A+EY+ + L      +AR  L ER      A  F  GY+P     L  HLR    TE EL  SGL +       +  R   DR  GRLV PIR   G ++GF  R LHE ++  KY+NTPET I+KK +VLYGL+ A+  +R +   VVVEGY DVMA H A V NAVA  GTA   DHVK +R  +  +G T          VV   DGD AG+ AA
Sbjct:    2 AGTINRDDIAAVRERAPIEDIIGQHVSLKSAGVGSLKGLCPFHDERSPSFHVRPAAGRWHCFGCGEGGDVIEFVMRMDGLPFAEAVEYLAERAGVTL---RYEAGGRRSSESGASMRRRLLEAHRVAAEYFRAQLATPEARIARDFLRERGFDREAAEHFGCGYAPQGWSHLTDHLRKSGFTEPELKASGLVS-------EGQRGVYDRFRGRLVWPIREVTGDVIGFGARRLHEDDQGPKYLNTPETQIYKKSHVLYGLDLAKGAIRSERTTVVVEGYTDVMACHLAGVTNAVATCGTAFGEDHVKVVRRLMGDTGQTQLKVGSHGAKVVFTFDGDEAGQNAA 335          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_062755898.1 (MULTISPECIES: DNA primase [Streptomyces] >KYG56213.1 DNA primase [Streptomyces sp. WAC04657] >AVH97618.1 DNA primase [Streptomyces sp. WAC00288])

HSP 1 Score: 249.6 bits (636), Expect = 4.500e-62
Identity = 152/368 (41.30%), Postives = 198/368 (53.80%), Query Frame = 0
Query:   75 DVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNALPSSGGT-VVLVLDGDAAGRKAAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADL 442
            D V+ VR +V    VV +++ L + G G   G CPFHD+ SPS  VS  KG++HCF C   GD   FV + + +SF E VE LA + GI +  E     GG   G  +   +RL +A + A+ YYA  LG     + R  L ER      A  F +GYSPA    L + LR    ++ EL+ SGL       +    R P DR  GRL+ PI++  G++VGF  R L + +   KY+NTPETPI+KK  VLYG++ A+  + K   AVVVEGY DVMA H A V  A+A  GTA   DHVK LR  L  +G   V+   DGDAAG+KAA R         E + K A     +A  P+G    DP DL
Sbjct:    8 DDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGLFHCFGCQEGGDTIAFVMKIDHLSFSETVERLAAKAGITLRYE----EGGYNPGHQRGERIRLIEAHQVAARYYADQLGSAEAEIGRKFLAERGFDQAAAEHFGVGYSPAGWDHLTRFLRGKGFSDKELILSGL-------SQDGRRGPIDRFRGRLMWPIKDVGGEIVGFGARKLRDDDNGPKYLNTPETPIYKKSQVLYGIDLAKKEIAKSSRAVVVEGYTDVMACHLAGVTTAIATCGTAFGGDHVKILRRLLMDNGSARVIFTFDGDAAGQKAALRA-------FEDDQKFAA-ETYIAVAPEG---MDPCDL 353          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_062529967.1 (DNA primase [Lysinimicrobium rhizosphaerae])

HSP 1 Score: 249.6 bits (636), Expect = 4.500e-62
Identity = 146/344 (42.44%), Postives = 182/344 (52.91%), Query Frame = 0
Query:   69 AAADGKDVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNAL----------PSSGGTVVLVLDGDAAGRKAA 403
            A    +D +  VR      +++ QHV L+  G G   G CPFHD+ SPS  V    G +HCF CG  GDV +FV   +G+ F EAVEYLAE  G+ +  E   G  G  SGA      RL +A   A+EY+   LG     +AR  L ER      A  F  GY+P     L  HLR    TE EL  SGL +       +  R   DR  GRLV PIR   G ++GF  R LHE ++  KY+NTPET I+KK +VLYGL+ A+  +R +   VVVEGY DVMA H A + NAVA  GTA   DHVK +R  +           S+G  VV   DGD AG+ AA
Sbjct:    2 AGTINRDDIAAVRERAPIEEIIGQHVSLKSAGVGSLKGLCPFHDERSPSFHVRPAAGRWHCFGCGEGGDVIEFVMRMDGLPFAEAVEYLAERAGVTLRYEA-GGRRGSESGA--SMRRRLLEAHRVAAEYFVEQLGSPEARIARDFLRERGFDGEAAAHFGCGYAPQGWSHLTDHLRRKGFTEPELKASGLVS-------EGQRGVYDRFRGRLVWPIREVTGDVIGFGARRLHEDDQGPKYLNTPETQIYKKSHVLYGLDLAKGAIRSERTTVVVEGYTDVMACHLAGITNAVATCGTAFGEDHVKVVRRLMGDTGQAQIKVGSTGAKVVFTFDGDEAGQNAA 335          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: SEI95060.1 (DNA primase [Lysinimicrobium mangrovi])

HSP 1 Score: 249.6 bits (636), Expect = 4.500e-62
Identity = 144/344 (41.86%), Postives = 183/344 (53.20%), Query Frame = 0
Query:   69 AAADGKDVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNALPSSGGT----------VVLVLDGDAAGRKAA 403
            A    +D +  VR      D++ QHV L+  G G   G CPFHD+ SPS  V    G +HCF CG  GDV +FV   +G+ F EAVEYLAE  G+ +    ++ GG  +S +      RL +A   A+EY+ + L      +AR  L ER      A  F  GY+P     L  HLR    TE EL  SGL +       +  R   DR  GRLV PIR   G ++GF  R LHE ++  KY+NTPET I+KK +VLYGL+ A+  +R +   VVVEGY DVMA H A V NAVA  GTA   DHVK +R  +  +G T          VV   DGD AG+ AA
Sbjct:    4 AGTINRDDIAAVRERAPIEDIIGQHVSLKSAGVGSLKGLCPFHDERSPSFHVRPAAGRWHCFGCGEGGDVIEFVMRMDGLPFAEAVEYLAERAGVTL---RYEAGGRRSSESGASMRRRLLEAHRVAAEYFRAQLATPEARIARDFLRERGFDREAAEHFGCGYAPQGWSHLTDHLRKSGFTEPELKASGLVS-------EGQRGVYDRFRGRLVWPIREVTGDVIGFGARRLHEDDQGPKYLNTPETQIYKKSHVLYGLDLAKGAIRSERTTVVVEGYTDVMACHLAGVTNAVATCGTAFGEDHVKVVRRLMGDTGQTQLKVGSHGAKVVFTFDGDEAGQNAA 337          
BLAST of NO11G01540 vs. NCBI_GenBank
Match: WP_073751523.1 (DNA primase [Streptomyces sp. CB03234] >OKK07981.1 DNA primase [Streptomyces sp. CB03234])

HSP 1 Score: 249.6 bits (636), Expect = 4.500e-62
Identity = 152/368 (41.30%), Postives = 199/368 (54.08%), Query Frame = 0
Query:   75 DVVELVRGSVVFSDVVKQHVDLEDKGDGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSFLEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYASMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLTEDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRLLHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDVMALHGADVKNAVACMGTAISVDHVKALRNALPSSGGT-VVLVLDGDAAGRKAAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADL 442
            D V+ VR +V    VV +++ L   G G   G CPFHD+ SPS  VS  KG++HCF C   GD   FV + + +SF E VE LA + GI +  E     GG   G  +   +RL +A +AA+++Y   L      + R  L ER      A  F +GYSPA    L +HLR    T+ EL+ SGL       + ++ R+P DR  GRL+ PIR+  G +VGF  R L + +   KY+NTPETPI+KK  VLYG++ A+  + K   AVVVEGY DVMA H A V  A+A  GTA   DH+K LR  L  +G   V+   DGDAAG+KAA R         E + K A     +A  P G    DP DL
Sbjct:   19 DDVKAVRDAVPIDAVVSEYLQLRSAGGGNLKGLCPFHDEKSPSFQVSPSKGLFHCFGCQEGGDTIAFVMKIDHLSFSETVERLAAKAGITLRYE----EGGYNPGHQRGERIRLIEAHKAAAQFYVEQLDSAEAEIGRKFLAERGFDQAAAQHFGVGYSPAGWDHLTRHLRGKGFTDKELLVSGL-------SQESRRSPIDRFRGRLMWPIRDVGGDVVGFGARRLRDDDNGPKYLNTPETPIYKKSQVLYGIDLAKKDIAKSSRAVVVEGYTDVMACHLAGVTTAIATCGTAFGSDHIKILRRLLMDNGSARVIFTFDGDAAGQKAALRA-------FEDDQKFAA-ETYIAIAPDG---MDPCDL 364          
The following BLAST results are available for this feature:
BLAST of NO11G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_079101652.12.600e-6243.81DNA primase, partial [Streptomyces pathocidini][more]
WP_061965367.13.400e-6241.57DNA primase [Demequina aurantiaca][more]
PLW72204.13.400e-6243.37DNA primase, partial [Streptomyces sp. DJ][more]
PVC70374.13.400e-6241.30DNA primase [Streptomyces sp. CS081A][more]
WP_030545534.14.500e-6243.50DNA primase [Streptomyces albus][more]
WP_042212981.14.500e-6241.86DNA primase [Lysinimicrobium mangrovi][more]
WP_062755898.14.500e-6241.30MULTISPECIES: DNA primase [Streptomyces] >KYG56213... [more]
WP_062529967.14.500e-6242.44DNA primase [Lysinimicrobium rhizosphaerae][more]
SEI95060.14.500e-6241.86DNA primase [Lysinimicrobium mangrovi][more]
WP_073751523.14.500e-6241.30DNA primase [Streptomyces sp. CB03234] >OKK07981.1... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL116nonsL116Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR019ngnoR019Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002111NSK002111Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G01540.1NO11G01540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|51836gene_5037Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100098g22gene5437Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G01540.1NO11G01540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G01540 ID=NO11G01540|Name=NO11G01540|organism=Nannochloropsis oceanica|type=gene|length=3537bp
AAATTCACAGGAAGCTTGCCCGCGGGGAGCCACGGGCCAGAAATGCCGCA
ATCCTGAAACGCACTCCTTGCTGCGAGTCTCCTCCACCCAACCATTGAAG
CGGACACGGCAGATAGCCACAAGGACAACCATGATGCCAGCGACAAGAAA
CGACCTACTGCTAGGCGTGATGCTGCTCCTTGTGGCTGCTGTCGAGGCCT
TCCAACTGCGGCCACCACGCGTGTCGGCGAACGCAATTACTATGGGCAGG
CCATGCAGTAGCAGTAGCAGCAGCGGCTCCTTCCTTTACACCCAGCCCAC
CACTCCTCCACCAACACAAACCTTCCGCCTCCACGCTGCTGCCGATGGAA
AGGATGTTGTGGAGTTGGTCCGTGGTTCAGTCGTTTTTTCTGACGTTGTC
AAGCAGCATGTAGACTTGGAGGATAAGGGAGACGGCCAATGGATGGGATG
CTGTCCTTTTCACGACGATAATAGCCCCAGCATGAGCGTCAGTGACGAGA
AAGGTGTATATCACTGCTTTTCGTGTGGGGCAAGTGGCGACGTGTTTAAA
TTTGTGTCGGAGAAGGAGGGAATGTCTTTCCTGGAAGCAGTTGAATACCT
AGCGGAGGAAGGAGGTATTGACATTGTCAAGGAAGGATGGAAAGGAGGAG
GCGGCGGGGCATCCGGCGCCATCAAGGAAGGTCACATGCGTTTGCACAAG
GCATTGGAAGCCGCGAGTGAGTATTACGCATCGATGCTTGGGGAAGTGCC
GGGTGGGCTGGCCCGCACGCACCTGCTGGAACGAGAGATAAGCGCCCGAT
TAGCAAATGAGTTCACCCTGGGCTACTCCCCGGCGACGGCAGGAGGGTTG
CTGCAGCACTTAAGGCCGTTGAAGTTGACGGAGGATGAATTGGTAAAAAG
CGGTTTGTTTGCTTCGTGGAGCGTGGAGGCCATGAAGGCGAATCGGGCGC
CTTCCGATCGGATGGGGGGGAGGTTGGTCATTCCTATTCGTAACGCCCGA
GGGCAGATGGTCGGATTCAGTGGGAGATTGTTACATGAAGGGGAGAGGAG
TGCGAAGTATATTAATACGCCAGAGACGCCGATTTTCAAGAAGAAGAATG
TATTGTATGGGCTGGAGAGGGCAAGGGCGAGAATGAGGAAGGACGGGGTG
GCTGTGGTGGTGGAAGGATACTTTGACGTGATGGCTTTGCATGGCGCGGA
TGTGAAAAATGCCGTGGCTTGTATGGGGACTGCGATAAGTGTTGATCATG
TTAAGGCTTTGAGAAATGCTCTGCCGTCGTCAGGTGGAACTGTTGTGTTG
GTCCTGGATGGGGACGCAGCAGGGAGAAAAGCTGCGGAGCGAACCTGTCT
GCAGGTGTTGTTACCTCTGGAAGTAGAAGGGAAAATGGCCGGCCTACACG
TCAAGGTCGCTGAACTTCCCCAAGGAGAAGAAGCCAAGGACCCTGCGGAT
TTAGTGAGGATGTATGAGACGAAGTGGGGGAAGGGGCAGGCAGGGGTCGT
ATTTCATCAAGAGGTCTTGGGGCCTGCGGTTCTTTGGAAGGAGTGGTATG
CGCGTCGTTTGATGGCAGGGGAGGGAGATACAGCGAGGAGAAGCAGCAGC
AGCAGCAGCAGCAGCAGCGATAGCACGATTGCTAGAGCAGACGCTGCGCA
GTTTTCAAAGAGGAGTGAGGCGCTGACTGATTTTTTGGCGCGTCTGCCCC
CCACGCAGCAGGCGGACAGGACATTCCTGAGTTCCTTGTTGGCCAAAGAA
GCTTTCCCTGAGAACGAGGCACTTAGAGAAAGAGTGACGAATGACTTGCT
CCAGCAATGTGATGAGAAACACCGTTTGTTCATGAAGAGGGAGCTGGAAC
GACAGCAGCAGCAGCAGGTCGTCAAGCAGCAGCAGCAAAGTCAACCACCG
CTACAGTCAAGGCAGTTGCAGCAGCAACCCTCGCGCTCACAACCGTCACG
CCCACAGCAGCAGCAACAACGGTCAGGGATGCTCCGACCGCTACAGCTGC
AGCAGCAGATAAGTCCTTATCCTCCCGAATGGACTCGGCAAGCTGGTGTC
CGTCATTCCCCTTCCCCTTCTTCCTCATTTTCTTCGTTCTCGTCCTCGTC
CCCGTCATCGTCCTTTCCAACCTCTCAACCAGCACCGGTGCACGGTACCG
GCTTCAAAAATGACGAATTAAGACCTCGATCCCTGCAAGCACCAGCAGCA
CCGAAAGCAGCCACAGCATCCCCTTACTCGTCCCTCCCGTCCTCCTCCTC
CTCCTCCTTTTCCTCTTCCTTTTCCTCGCCCTCGACCTCCTCCTCCTTCG
GCGACGAGGATAACAAAGCCATCCTCATCTACGAGCAGTCTGTTCTCGAG
TTTCTCATTGCTGACCCCCGGGCACTTGCGCGTGTAAGGGATTTCCTGTG
GGCTGGCAGCAGCAGCAGCGGCGGCGGCAGCAGCAGTACCAGCAACATCA
ACAGCAATCCTGCCGTCCACTCCTACCAGCAGCACCCTCAACGACCACAG
GAGCTCATTCTCTCCACGCACGCCCACCAAGTGCTGTTTGACTGGCTCAT
GAACATTGAGGACCGCCGAGTCTTCGCAAATTCCGCCTCCTCTTCGTCCT
TCCCTCCCTCCCCCGCTGCCTTCTCCGGGGGTAGCCATGGTATTGGTCTG
CTTAAACAGCAATTCGAACGGGAGGCCCCGGCGTACCGTGAGCTACTCGT
CTACTTTGATCGAAGTGTTGCCCGGGTGACTCCCCATACAGCGGAGAACC
TGCAAGCAATCCTGAGGAGTGCCTTGAAGTTTTTGGTAGAGGTCACTGTG
GCTCGACGGGTGGAAGAAGAGACGCAGAGATGGCAGGGGCGGTTGTCGCA
CTTGGATCGATTAACGGCGACCAATCAGTATGGCAGCGAACAGCAGCATC
AGTCGCAGGAACAGGAACAACAGCTGCAGCAGTATCAGCAGTATCAGCAG
TACCTGCAGCAGCAGTACGAGCAGAGCGAGCGAAGACCTTCCCCTTTCGT
TCAATCCACGTATCCGCAGCAGGGAATGTCGTTCTACCCTTCCTGGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATACTAC
CGACAGTATCAGCAGCCGCAGCCGCAGCAGCAGCCGCAGCAGCAACCGCA
GCAGCAACAACAGCAACATCGGCAGGCACAACCCGTGGGGGGAATGCTAT
CACCAAGAGCCTACGAGACCCAGCCACGGCCGCGGTGGCCTTCAGAAATG
CGAGAAGGAGATAGAGCAGGCACAGGGGGGCCGGGGATCCCCTCATACCA
ACAGCAGCAATTACAACAGCAGCAGCCCCAGCAGCTGCCACCTCAAGCGC
AGGCCCAGCAGCAGTACCGAGGATCCCCCCCTCAGAACCGATTATGACGA
CCTCATCTCCGTGGTCCGAGGTAGAATTTAAGCATCAAGAAGACAAGCAC
GTAAACTTTTTCGTATTCTTGTAACTAACGACTTAAACGAGGAGATAAGT
CTACGCATCATGGAAAGTAATGAAATGAACACACGTA
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protein sequence of NO11G01540.1

>NO11G01540.1-protein ID=NO11G01540.1-protein|Name=NO11G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1089bp
MMPATRNDLLLGVMLLLVAAVEAFQLRPPRVSANAITMGRPCSSSSSSGS
FLYTQPTTPPPTQTFRLHAAADGKDVVELVRGSVVFSDVVKQHVDLEDKG
DGQWMGCCPFHDDNSPSMSVSDEKGVYHCFSCGASGDVFKFVSEKEGMSF
LEAVEYLAEEGGIDIVKEGWKGGGGGASGAIKEGHMRLHKALEAASEYYA
SMLGEVPGGLARTHLLEREISARLANEFTLGYSPATAGGLLQHLRPLKLT
EDELVKSGLFASWSVEAMKANRAPSDRMGGRLVIPIRNARGQMVGFSGRL
LHEGERSAKYINTPETPIFKKKNVLYGLERARARMRKDGVAVVVEGYFDV
MALHGADVKNAVACMGTAISVDHVKALRNALPSSGGTVVLVLDGDAAGRK
AAERTCLQVLLPLEVEGKMAGLHVKVAELPQGEEAKDPADLVRMYETKWG
KGQAGVVFHQEVLGPAVLWKEWYARRLMAGEGDTARRSSSSSSSSSDSTI
ARADAAQFSKRSEALTDFLARLPPTQQADRTFLSSLLAKEAFPENEALRE
RVTNDLLQQCDEKHRLFMKRELERQQQQQVVKQQQQSQPPLQSRQLQQQP
SRSQPSRPQQQQQRSGMLRPLQLQQQISPYPPEWTRQAGVRHSPSPSSSF
SSFSSSSPSSSFPTSQPAPVHGTGFKNDELRPRSLQAPAAPKAATASPYS
SLPSSSSSSFSSSFSSPSTSSSFGDEDNKAILIYEQSVLEFLIADPRALA
RVRDFLWAGSSSSGGGSSSTSNINSNPAVHSYQQHPQRPQELILSTHAHQ
VLFDWLMNIEDRRVFANSASSSSFPPSPAAFSGGSHGIGLLKQQFEREAP
AYRELLVYFDRSVARVTPHTAENLQAILRSALKFLVEVTVARRVEEETQR
WQGRLSHLDRLTATNQYGSEQQHQSQEQEQQLQQYQQYQQYLQQQYEQSE
RRPSPFVQSTYPQQGMSFYPSWQQQQQQQQQQQQQQQQYYRQYQQPQPQQ
QPQQQPQQQQQQHRQAQPVGGMLSPRAYETQPRPRWPSEMREGDRAGTGG
PGIPSYQQQQLQQQQPQQLPPQAQAQQQYRGSPPQNRL*
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Synonyms
Publications