NO11G00780, NO11G00780 (gene) Nannochloropsis oceanica

Overview
NameNO11G00780
Unique NameNO11G00780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3278
Alignment locationchr11:314834..318111 -

Link to JBrowse

Properties
Property NameValue
DescriptionNa h antiporter
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:314834..318111 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015299solute:proton antiporter activity
GO:0015385sodium:proton antiporter activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0006885regulation of pH
GO:0006814sodium ion transport
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR018409Na/H_exchanger_8
IPR018422Cation/H_exchanger_CPA1
IPR006153Cation/H_exchanger
IPR004709NaH_exchanger
Homology
BLAST of NO11G00780 vs. NCBI_GenBank
Match: PON85505.1 (Na+/H+ exchanger [Trema orientalis])

HSP 1 Score: 186.4 bits (472), Expect = 3.400e-43
Identity = 130/399 (32.58%), Postives = 226/399 (56.64%), Query Frame = 0
Query:  113 AGGMLLGLLLSKSFHIRTQFSQEVFFYLILPPIIFYQGYSLKKRNFFRFFHYIFTLGVVGTIINMGVVAICLVSLNKAWLALGLPLVGWDDASRHQALGMDDILLLSSVLSSADEVAALAMVNKNQHPKLSALLFGEGVLNDAVSILLFRSVLKGDAES--SLYAVTVAWTALFLLFSSTLVGLAVGLCISRLLKVNTGLNNHPTRQTIIIVLGCYVSYALAELLNINGVLSVFVCGIIFSHFAWHSLAPEAKIGTAIFSRALSQIAEIYSFTALGLSVY---RFQTSDFSF-RYLCISFLAMAL---ARAVVVFGLFGLAMYFDRKHMFKEAWKDQLVLFGAGLVRGAIT-------WAQALQLPGGNRRVLISTTLQVISITLVVVGGALPSLLRAL 496
            AGG++L +  S+S H+   FS+++FF  +LPPIIF  G+ +KK+ FF+ F  I   GV GTII     + C++S     L   + +          +L + D L + ++LS+ D V  L ++N+++ P L + +FGEGV+NDA SI+LF SV   D  +  +  A+ + WT L+L F+ST +G+ VGL  + ++K      +   R+  ++++  Y+SY LAELLN++G+L+VF CGI+ SH+ WH++   ++I T      +S IAE + F  +G+ V    ++++S  S    + +S   +AL    RA  VF +  +    +R+   K  ++ Q +++ AGL+RGA+T       +A + +    +  ++I++T+ V+  + VV G     L+ A+
Sbjct:   66 AGGVVLLVSKSRSSHLLV-FSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTTILLFGVFGTII-----SFCIISSGAFLLFKRIGI---------SSLNVKDYLAVGAILSATDSVCTLQVLNQDETPFLYSTVFGEGVVNDATSIVLFNSVQSLDFSNIDAGTALKLLWTFLYLFFTSTALGIVVGLTSAYIIKTLYFGRHSTDREVALMMIMPYLSYMLAELLNLSGILTVFFCGIVMSHYTWHNVTESSRITTMHAFATISFIAETFIFIYVGMDVLDIDKWRSSSASAGTSIAVSSTLLALVLIGRAAFVFSISNIKNLVERRESTKIEFRKQFIIWWAGLMRGAVTIALTYSQFADSKETSTKDDALMITSTIIVVLFSTVVFGSITKPLIEAV 449          
BLAST of NO11G00780 vs. NCBI_GenBank
Match: XP_008388593.1 (PREDICTED: sodium/hydrogen exchanger 1-like [Malus domestica] >XP_008350615.1 PREDICTED: sodium/hydrogen exchanger 1-like [Malus domestica])

HSP 1 Score: 186.0 bits (471), Expect = 4.500e-43
Identity = 131/381 (34.38%), Postives = 214/381 (56.17%), Query Frame = 0
Query:  132 FSQEVFFYLILPPIIFYQGYSLKKRNFFRFFHYIFTLGVVGTIINMGVVAICLVSLNKAWLALGLPLVGWDDASRHQALGMDDILLLSSVLSSADEVAALAMVNKNQHPKLSALLFGEGVLNDAVSILLFRSVLKGDAE--SSLYAVTVAWTALFLLFSSTLVGLAVGLCISRLLKVNTGLNNHPTRQTIIIVLGCYVSYALAELLNINGVLSVFVCGIIFSHFAWHSLAPEAKIGTAIFSRALSQIAEIYSFTALG---LSVYRFQTSDFS-FRYLCISFLAMAL---ARAVVVFGLFGLAMYFDRKHMFKEAWKDQLVLFGAGLVRGAITWAQALQLPGGN--------RRVLISTTLQVISITLVVVGGALPSLLRAL 496
            FS+ +FF  +LPPIIF  G+ +KK+ FF+ F  I   G+VGT     V++ CL+SL  A+L          +      L + DIL + ++ S+ D V  L ++N+++ P L +++FGEGV+NDA SI+LF +V   D    S+L A+T+    L+L F+STL+G+A GL  + ++K      +   R+  +++L  Y+SY LAELLN++G+L+VF CGI+ SH+ WH++   +++ T      LS IAE + F  +G   L + +++ S  S    + +S + + L    RA  VF +  +   F  +   K  +KDQ  ++ AGL+RGA+T A +      N        R ++I++T+ V+  + VV G     L+ AL
Sbjct:   93 FSENLFFLYLLPPIIFNAGFQVKKKQFFKNFTTILLFGIVGT-----VISFCLISLG-AYLLF--------NRFGFSTLTIKDILAIGAIFSATDSVCTLQVLNQDETPFLYSIVFGEGVVNDATSIVLFNAVQSLDVSNLSALTALTLLGNFLYLFFTSTLLGIAAGLISAFIIKTLYFGRHSTDREVALMILMAYLSYMLAELLNLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFIAETFIFLYVGMDALDIDKWKASKASPGTSVGVSSILLGLVLVGRAAFVFPIANIKNCFKNREGTKIKFKDQFTMWWAGLMRGAVTIALSYNEFADNTKTTSTQDRSLMITSTIIVVLFSTVVFGSITKPLISAL 459          
BLAST of NO11G00780 vs. NCBI_GenBank
Match: AVA17659.1 (Na+/H+ antiporter family protein 5 [Populus ciliata])

HSP 1 Score: 186.0 bits (471), Expect = 4.500e-43
Identity = 125/398 (31.41%), Postives = 222/398 (55.78%), Query Frame = 0
Query:  113 AGGMLLGLLLSKSFHIRTQFSQEVFFYLILPPIIFYQGYSLKKRNFFRFFHYIFTLGVVGTIINMGVVAICLVSLNKAWLALGLPLVGWDDASRHQALGMDDILLLSSVLSSADEVAALAMVNKNQHPKLSALLFGEGVLNDAVSILLFRSVLKGDAES--SLYAVTVAWTALFLLFSSTLVGLAVGLCISRLLKVNTGLNNHPTRQTIIIVLGCYVSYALAELLNINGVLSVFVCGIIFSHFAWHSLAPEAKIGTAIFSRALSQIAEIYSFTALGLSVYRFQ-------TSDFSFRYLCISFLAMALARAVVVFGLFGLAMYFDRKHMFKEAWKDQLVLFGAGLVRGAITWAQAL-QLPGGNRR-----VLISTTLQVISITLVVVGGALPSLLRAL 496
            AGG++L +    S H+  +FS+++FF  +LPPIIF  G+ +KK+ FF+ F  I   G+ GT     V++ C++SL   W+   + +         ++L + D L + +++S+ D V  L ++++++ P L +++FGEGV+NDA SI+LF SV   D  +   L  + +  T L+LLF+ST +G+AVGL  + ++K      +   R+  +++L  Y+SY LAELLN++G+L+VF CGI+ SH+ WH++   ++I T      +S IAE + F  +G+             ++  S       F  + + RA  VF +  +     ++   K  +K Q++++ AGL+RGA+T A +  Q     R+     ++I++T+ V+  + +V G     L+ A+
Sbjct:   60 AGGVVLLVRKGASSHL-LKFSEDLFFLYLLPPIIFNAGFQVKKKRFFKNFSTILLFGIFGT-----VISFCIISLGVFWIFRKIGV---------KSLSLKDHLAIGAIMSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLFNSVQTLDFHNIDGLTVLNLIGTFLYLLFTSTALGIAVGLLSAFIIKTLYFGRHSTDREFALMILMAYLSYLLAELLNLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATMSFIAETFIFLYVGMDALDIDKWRESKASAGTSAAVSSTLFALVLVGRAAFVFPIANILNCVQKRESSKIHFKQQVIMWWAGLMRGAVTIALSYNQFASSTRKSPESALMITSTIIVVLFSTIVCGSVTKPLIEAV 442          
BLAST of NO11G00780 vs. NCBI_GenBank
Match: AVA17662.1 (Na+/H+ antiporter family protein 5 [Populus nigra var. italica] >AVA17673.1 Na+/H+ antiporter family protein 5 [Populus nigra var. thevestina])

HSP 1 Score: 186.0 bits (471), Expect = 4.500e-43
Identity = 125/398 (31.41%), Postives = 222/398 (55.78%), Query Frame = 0
Query:  113 AGGMLLGLLLSKSFHIRTQFSQEVFFYLILPPIIFYQGYSLKKRNFFRFFHYIFTLGVVGTIINMGVVAICLVSLNKAWLALGLPLVGWDDASRHQALGMDDILLLSSVLSSADEVAALAMVNKNQHPKLSALLFGEGVLNDAVSILLFRSVLKGDAES--SLYAVTVAWTALFLLFSSTLVGLAVGLCISRLLKVNTGLNNHPTRQTIIIVLGCYVSYALAELLNINGVLSVFVCGIIFSHFAWHSLAPEAKIGTAIFSRALSQIAEIYSFTALGLSVYRFQ-------TSDFSFRYLCISFLAMALARAVVVFGLFGLAMYFDRKHMFKEAWKDQLVLFGAGLVRGAITWAQAL-QLPGGNRR-----VLISTTLQVISITLVVVGGALPSLLRAL 496
            AGG++L +    S H+  +FS+++FF  +LPPIIF  G+ +KK+ FF+ F  I   G+ GT     V++ C++SL   W+   + +         ++L + D L + +++S+ D V  L ++++++ P L +++FGEGV+NDA SI+LF SV   D  +   L  + +  T L+LLF+ST +G+AVGL  + ++K      +   R+  +++L  Y+SY LAELLN++G+L+VF CGI+ SH+ WH++   ++I T      +S IAE + F  +G+             ++  S       F  + + RA  VF +  +     ++   K  +K Q++++ AGL+RGA+T A +  Q     R+     ++I++T+ V+  + +V G     L+ A+
Sbjct:   60 AGGVVLLIRKGASSHL-LKFSEDLFFLYLLPPIIFNAGFQVKKKRFFKNFSTILLFGIFGT-----VISFCIISLGVFWIFRKIGV---------KSLSLKDHLAIGAIMSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLFNSVQTLDFHNIDGLTVLKLIGTFLYLLFTSTALGIAVGLLSAFIIKTLYFGRHSTDREFALMILMAYLSYLLAELLNLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATMSFIAETFIFLYVGMDALDIDKWRESKASAGTSAAVSSTLFALVLVGRAAFVFPIANILNCVQKRESSKIHFKQQVIMWWAGLMRGAVTIALSYNQFASSTRKSPESALMITSTIIVVLFSTIVCGSVTKPLIEAV 442          
BLAST of NO11G00780 vs. NCBI_GenBank
Match: AVA17667.1 (Na+/H+ antiporter family protein 5 [Populus nigra])

HSP 1 Score: 186.0 bits (471), Expect = 4.500e-43
Identity = 125/398 (31.41%), Postives = 222/398 (55.78%), Query Frame = 0
Query:  113 AGGMLLGLLLSKSFHIRTQFSQEVFFYLILPPIIFYQGYSLKKRNFFRFFHYIFTLGVVGTIINMGVVAICLVSLNKAWLALGLPLVGWDDASRHQALGMDDILLLSSVLSSADEVAALAMVNKNQHPKLSALLFGEGVLNDAVSILLFRSVLKGDAES--SLYAVTVAWTALFLLFSSTLVGLAVGLCISRLLKVNTGLNNHPTRQTIIIVLGCYVSYALAELLNINGVLSVFVCGIIFSHFAWHSLAPEAKIGTAIFSRALSQIAEIYSFTALGLSVYRFQ-------TSDFSFRYLCISFLAMALARAVVVFGLFGLAMYFDRKHMFKEAWKDQLVLFGAGLVRGAITWAQAL-QLPGGNRR-----VLISTTLQVISITLVVVGGALPSLLRAL 496
            AGG++L +    S H+  +FS+++FF  +LPPIIF  G+ +KK+ FF+ F  I   G+ GT     V++ C++SL   W+   + +         ++L + D L + +++S+ D V  L ++++++ P L +++FGEGV+NDA SI+LF SV   D  +   L  + +  T L+LLF+ST +G+AVGL  + ++K      +   R+  +++L  Y+SY LAELLN++G+L+VF CGI+ SH+ WH++   ++I T      +S IAE + F  +G+             ++  S       F  + + RA  VF +  +     ++   K  +K Q++++ AGL+RGA+T A +  Q     R+     ++I++T+ V+  + +V G     L+ A+
Sbjct:   60 AGGVVLLIRKGASSHL-LKFSEDLFFLYLLPPIIFNAGFQVKKKRFFKNFSTILLFGIFGT-----VISFCIISLGVFWIFRKIGV---------KSLSLKDHLAIGAIMSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLFNSVQTLDFHNIDGLTVLKLIGTFLYLLFTSTALGIAVGLLSAFIIKTLYFGRHSTDREFALMILMAYLSYLLAELLNLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATMSFIAETFIFLYVGMDALDIDKWRESKASAGTSAAVSSTLFALVLVGRAAFVFPIANILNCVQKRESSKIHFKQQVIMWWAGLMRGAVTIALSYNQFASSTRKSPESALMITSTIIVVLFSTIVCGSVTKPLIEAV 442          
BLAST of NO11G00780 vs. NCBI_GenBank
Match: AVA17663.1 (Na+/H+ antiporter family protein 5 [Populus laurifolia])

HSP 1 Score: 186.0 bits (471), Expect = 4.500e-43
Identity = 125/398 (31.41%), Postives = 220/398 (55.28%), Query Frame = 0
Query:  113 AGGMLLGLLLSKSFHIRTQFSQEVFFYLILPPIIFYQGYSLKKRNFFRFFHYIFTLGVVGTIINMGVVAICLVSLNKAWLALGLPLVGWDDASRHQALGMDDILLLSSVLSSADEVAALAMVNKNQHPKLSALLFGEGVLNDAVSILLFRSVLKGDAES--SLYAVTVAWTALFLLFSSTLVGLAVGLCISRLLKVNTGLNNHPTRQTIIIVLGCYVSYALAELLNINGVLSVFVCGIIFSHFAWHSLAPEAKIGTAIFSRALSQIAEIYSFTALGLSVYRFQ-------TSDFSFRYLCISFLAMALARAVVVFGLFGLAMYFDRKHMFKEAWKDQLVLFGAGLVRGAITWAQALQLPGGNRR------VLISTTLQVISITLVVVGGALPSLLRAL 496
            AGG++L +    S H+  +FS+++FF  +LPPIIF  G+ +KK+ FF+ F  I   G+ GT     V++ C++SL   W+   + +         ++L + D L + +++S+ D V  L ++++++ P L +++FGEGV+NDA SI+LF SV   D  +   L  + +  T L+LLF+ST +G+AVGL  + ++K      +   R+  +++L  Y+SY LAELLN++G+L+VF CGI+ SH+ WH++   ++I T      +S IAE + F  +G+             ++  S       F  + + RA  VF +  +     +    K  +K Q++++ AGL+RGA+T A +    G   R      ++I++T+ V+  + +V G     L+ A+
Sbjct:   60 AGGVVLLVRKGASSHL-LKFSEDLFFLYLLPPIIFNAGFQVKKKRFFKNFSTILLFGIFGT-----VISFCIISLGVFWIFRKIGV---------ESLSLKDHLAIGAIMSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLFNSVQTLDFHNIDGLTVLKLIGTFLYLLFTSTALGIAVGLLSAFIIKTLYFGRHSTDREFALMILMAYLSYLLAELLNLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATMSFIAETFIFLYVGMDALDIDKWRESKASAGTSAAVSSTLFALVLVGRAAFVFPIANILNCVQKSESSKIHFKQQVIMWWAGLMRGAVTIALSYNQFGSYMRKSPESALMITSTIIVVLFSTIVCGSVTKPLIEAV 442          
BLAST of NO11G00780 vs. NCBI_GenBank
Match: AVA17666.1 (Na+/H+ antiporter family protein 5 [Populus nigra])

HSP 1 Score: 186.0 bits (471), Expect = 4.500e-43
Identity = 125/398 (31.41%), Postives = 222/398 (55.78%), Query Frame = 0
Query:  113 AGGMLLGLLLSKSFHIRTQFSQEVFFYLILPPIIFYQGYSLKKRNFFRFFHYIFTLGVVGTIINMGVVAICLVSLNKAWLALGLPLVGWDDASRHQALGMDDILLLSSVLSSADEVAALAMVNKNQHPKLSALLFGEGVLNDAVSILLFRSVLKGDAES--SLYAVTVAWTALFLLFSSTLVGLAVGLCISRLLKVNTGLNNHPTRQTIIIVLGCYVSYALAELLNINGVLSVFVCGIIFSHFAWHSLAPEAKIGTAIFSRALSQIAEIYSFTALGLSVYRFQ-------TSDFSFRYLCISFLAMALARAVVVFGLFGLAMYFDRKHMFKEAWKDQLVLFGAGLVRGAITWAQAL-QLPGGNRR-----VLISTTLQVISITLVVVGGALPSLLRAL 496
            AGG++L +    S H+  +FS+++FF  +LPPIIF  G+ +KK+ FF+ F  I   G+ GT     V++ C++SL   W+   + +         ++L + D L + +++S+ D V  L ++++++ P L +++FGEGV+NDA SI+LF SV   D  +   L  + +  T L+LLF+ST +G+AVGL  + ++K      +   R+  +++L  Y+SY LAELLN++G+L+VF CGI+ SH+ WH++   ++I T      +S IAE + F  +G+             ++  S       F  + + RA  VF +  +     ++   K  +K Q++++ AGL+RGA+T A +  Q     R+     ++I++T+ V+  + +V G     L+ A+
Sbjct:   60 AGGVVLLIRKGASSHL-LKFSEDLFFLYLLPPIIFNAGFQVKKKRFFKNFSTILLFGIFGT-----VISFCIISLGVFWIFRKIGV---------KSLSLKDHLAIGAIMSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLFNSVQTLDFHNIDGLTVLKLIGTFLYLLFTSTALGIAVGLLSAFIIKTLYFGRHSTDREFALMILMAYLSYLLAELLNLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATMSFIAETFIFLYVGMDALDIDKWRESKASAGTSAAVSSTLFALVLVGRAAFVFPIANILNCVQKRESSKIHFKQQVIMWWAGLMRGAVTIALSYNQFASSTRKSPESALMITSTIIVVLFSTIVCGSVTKPLIEAV 442          
BLAST of NO11G00780 vs. NCBI_GenBank
Match: AVA17668.1 (Na+/H+ antiporter family protein 5 [Populus purdomii])

HSP 1 Score: 186.0 bits (471), Expect = 4.500e-43
Identity = 125/398 (31.41%), Postives = 222/398 (55.78%), Query Frame = 0
Query:  113 AGGMLLGLLLSKSFHIRTQFSQEVFFYLILPPIIFYQGYSLKKRNFFRFFHYIFTLGVVGTIINMGVVAICLVSLNKAWLALGLPLVGWDDASRHQALGMDDILLLSSVLSSADEVAALAMVNKNQHPKLSALLFGEGVLNDAVSILLFRSVLKGDAES--SLYAVTVAWTALFLLFSSTLVGLAVGLCISRLLKVNTGLNNHPTRQTIIIVLGCYVSYALAELLNINGVLSVFVCGIIFSHFAWHSLAPEAKIGTAIFSRALSQIAEIYSFTALGLSVYRFQ-------TSDFSFRYLCISFLAMALARAVVVFGLFGLAMYFDRKHMFKEAWKDQLVLFGAGLVRGAITWAQAL-QLPGGNRR-----VLISTTLQVISITLVVVGGALPSLLRAL 496
            AGG++L +    S H+  +FS+++FF  +LPPIIF  G+ +KK+ FF+ F  I   G+ GT     V++ C++SL   W+   + +         ++L + D L + +++S+ D V  L ++++++ P L +++FGEGV+NDA SI+LF SV   D  +   L  + +  T L+LLF+ST +G+AVGL  + ++K      +   R+  +++L  Y+SY LAELLN++G+L+VF CGI+ SH+ WH++   ++I T      +S IAE + F  +G+             ++  S       F  + + RA  VF +  +     ++   K  +K Q++++ AGL+RGA+T A +  Q     R+     ++I++T+ V+  + +V G     L+ A+
Sbjct:   60 AGGVVLLVRKGASSHL-LKFSEDLFFLYLLPPIIFNAGFQVKKKRFFKNFSTILLFGIFGT-----VISFCIISLGVFWIFRKIGV---------KSLSLKDHLAIGAIMSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLFNSVQTLDFHNIDGLTVLNLIGTFLYLLFTSTALGIAVGLLSAFIIKTLYFGRHSTDREFALMILMAYLSYLLAELLNLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATMSFIAETFIFLYVGMDALDIDKWRESKASAGTSAAVSSTLFALVLVGRAAFVFPIANILNCVQKRESSKIHFKQQVIMWWAGLMRGAVTIALSYNQFASSTRKSPESALMITSTIIVVLFSTIVCGSVTKPLIEAV 442          
BLAST of NO11G00780 vs. NCBI_GenBank
Match: PON64420.1 (Na+/H+ exchanger [Parasponia andersonii])

HSP 1 Score: 185.7 bits (470), Expect = 5.800e-43
Identity = 129/399 (32.33%), Postives = 222/399 (55.64%), Query Frame = 0
Query:  113 AGGMLLGLLLSKSFHIRTQFSQEVFFYLILPPIIFYQGYSLKKRNFFRFFHYIFTLGVVGTIINMGVVAICLVSLNKAWLALGLPLVGWDDASRHQALGMDDILLLSSVLSSADEVAALAMVNKNQHPKLSALLFGEGVLNDAVSILLFRSVLKGDAES--SLYAVTVAWTALFLLFSSTLVGLAVGLCISRLLKVNTGLNNHPTRQTIIIVLGCYVSYALAELLNINGVLSVFVCGIIFSHFAWHSLAPEAKIGTAIFSRALSQIAEIYSFTALGLSVYRF----QTSDFSFRYLCISFLAMAL---ARAVVVFGLFGLAMYFDRKHMFKEAWKDQLVLFGAGLVRGAIT-------WAQALQLPGGNRRVLISTTLQVISITLVVVGGALPSLLRAL 496
            AGG++L +  S+S H+   FS+++FF  +LPPIIF  G+ +KK+ FF+ F  I   GV GTII     + C++S     L   + +           L + D L + ++LS+ D V  L ++N+++ P L + +FGEGV+NDA SI+LF SV   D  +  +  A+ + WT L+L F+ST +G+ VGL  + ++K      +   R+  ++++  Y+SY LAELLN++G+L+VF CGI+ SH+ WH++   ++I T      +S IAE + F  +G+ V        +S  +   + +S   +AL    RA  VF +  +    +R+   K  ++ Q +++ AGL+RGA+T       +A + +    +  ++I++T+ V+  + VV G     L+ A+
Sbjct:   66 AGGVVLLVSKSRSSHLLV-FSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTTILLFGVFGTII-----SFCIISSGAFLLFKRIGI---------SRLNVKDYLAVGAILSATDSVCTLQVLNQDETPFLYSTVFGEGVVNDATSIVLFYSVQSLDFSNIDAGTALKLLWTFLYLFFTSTALGIVVGLMSAYIIKTLYFGRHSTDREVALMMIMPYLSYMLAELLNLSGILTVFFCGIVMSHYTWHNITESSRITTMHAFATISFIAETFIFVYVGMDVLDIDKWRSSSTSAGTSIAVSSTLLALVLIGRAAFVFSISNIKNLVERRESTKIEFRKQFIIWWAGLMRGAVTIALTYSQFADSKETSTKDDALMITSTIIVVLFSTVVFGSITKPLIEAV 449          
BLAST of NO11G00780 vs. NCBI_GenBank
Match: AVA17664.1 (Na+/H+ antiporter family protein 5 [Populus alba])

HSP 1 Score: 185.7 bits (470), Expect = 5.800e-43
Identity = 126/398 (31.66%), Postives = 223/398 (56.03%), Query Frame = 0
Query:  113 AGGMLLGLLLSKSFHIRTQFSQEVFFYLILPPIIFYQGYSLKKRNFFRFFHYIFTLGVVGTIINMGVVAICLVSLNKAWLALGLPLVGWDDASRHQALGMDDILLLSSVLSSADEVAALAMVNKNQHPKLSALLFGEGVLNDAVSILLFRSVLKGDAES--SLYAVTVAWTALFLLFSSTLVGLAVGLCISRLLKVNTGLNNHPTRQTIIIVLGCYVSYALAELLNINGVLSVFVCGIIFSHFAWHSLAPEAKIGTAIFSRALSQIAEIYSFTALGLSVYRFQ-------TSDFSFRYLCISFLAMALARAVVVFGLFGLAMYFDRKHMFKEAWKDQLVLFGAGLVRGAITWAQAL-QLPGGNRR-----VLISTTLQVISITLVVVGGALPSLLRAL 496
            AGG++L +   +S H+  +FS+++FF  +LPPIIF  G+ +KK+ FF+ F  I   G+ GT     V++ C++SL   W+   + +         ++L + D L + +++S+ D V  L ++++++ P L +++FGEGV+NDA SI+LF SV   D  +   L  + +  T L+LLF+ST +G+AVGL  + ++K      +   R+  +++L  Y+SY LAELLN++G+L+VF CGI+ SH+ WH++   ++I T      +S IAE + F  +G+             ++  S       F  + + RA  VF +  +     ++   K  +K Q++++ AGL+RGA+T A +  Q     RR     ++I++T+ V+  + +V G     L+ A+
Sbjct:   60 AGGVVLLVRKGESSHL-LKFSEDLFFLYLLPPIIFNAGFQVKKKRFFKNFSTILLFGIFGT-----VISFCIISLGVFWIFRKIGV---------KSLSLKDHLAIGAIMSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLFNSVQTLDFHNIDGLTVLKLIGTFLYLLFTSTALGIAVGLLSAFIIKTLYFGRHSTDREFALMILMAYLSYLLAELLNLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATMSFIAETFIFLYVGMDALDIDKWRESKASAGTSAAVSSTLFALVLVGRAAFVFPIANILNCVQKRESSKIHFKQQVIMWWAGLMRGAVTIALSYNQFASYMRRSPESALMITSTIIVVLFSTIVCGSVTKPLIEAV 442          
The following BLAST results are available for this feature:
BLAST of NO11G00780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PON85505.13.400e-4332.58Na+/H+ exchanger [Trema orientalis][more]
XP_008388593.14.500e-4334.38PREDICTED: sodium/hydrogen exchanger 1-like [Malus... [more]
AVA17659.14.500e-4331.41Na+/H+ antiporter family protein 5 [Populus ciliat... [more]
AVA17662.14.500e-4331.41Na+/H+ antiporter family protein 5 [Populus nigra ... [more]
AVA17667.14.500e-4331.41Na+/H+ antiporter family protein 5 [Populus nigra][more]
AVA17663.14.500e-4331.41Na+/H+ antiporter family protein 5 [Populus laurif... [more]
AVA17666.14.500e-4331.41Na+/H+ antiporter family protein 5 [Populus nigra][more]
AVA17668.14.500e-4331.41Na+/H+ antiporter family protein 5 [Populus purdom... [more]
PON64420.15.800e-4332.33Na+/H+ exchanger [Parasponia andersonii][more]
AVA17664.15.800e-4331.66Na+/H+ antiporter family protein 5 [Populus alba][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002195NSK002195Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00780.1NO11G00780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|47348gene_4947Nannochloropsis oceanica (N. oceanica CCMP1779)gene
NHX1gene5358Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00780.1NO11G00780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00780 ID=NO11G00780|Name=NO11G00780|organism=Nannochloropsis oceanica|type=gene|length=3278bp
ATGGGAGAAAGCATACCCACAATCGGGTTCGAGGAGGCTAGCCAGGAGTT
GCTCTCCTCCAGCTATAACGCGTCACCATTGTACCATTCCTCGATGATGC
GGACACACAGCTCCGTAAAGGAGCACACGCAGCCTCCTGGTGGCCTTTCG
ACAATGCTGACGGACCTACCTCCTAGTGTTCTATCGCTACTCCTCAACAT
CATCTTGATTTTCCTGACCATCTACCTAAGCAATGCCTCGGACTACCTGC
GGGACATCGTTCATAAGgtaggttttcgatccagccgcgttagtgcggca
acaatccgccaagctttggtcccgaatcgtcttatcagttgtggatttcc
aggatgtgtgtgcgtgggagtggtgctcatgtctctgccctccccgccca
gggcggggccattgtcaagcattaatttttgtgtgtgtgcggggcgggac
gtccacacgtagaaatttttcagaaggtgtagctggatcccatcgccata
cgcatttgttgcggtcgccaaatgaatccgctcagatatatcccctcttc
ccgtttccctgtactgacagAATCCAAATCTGAGGTTTCGCTTTCTGCTT
CGCCTAGTGAGCGACATGCCCGAGAGCACCATCGCTGTGGCCGGTGGCAT
GCTCTTGGGCCTTTTGCTCTCCAAAAGCTTTCATATTCGAACACAGTTTT
CCCAGGAGGTCTTTTTCTACTTGATCCTTCCGCCTATCATTTTCTACCAA
GGgtaagtggaagggagacatgcgatgaaggcgggagtacccataaaggg
caattactagtaatgtagccttttttcatcgttggttcgaagaaaaagag
acgcgttgatagagaaaggcgctttcgagtgaaaagaagtcaccgacgct
ctcctctcctttccaacaactgttcccatcatctcagCTACTCGCTGAAG
AAACGAAATTTCTTCCGGTTCTTCCACTACATATTTACGCTGGGAGTAGT
TGGCACAATTATCAACATGGGTGTGGTGGCCATCTGTCTCGTGTCTCTCA
ACAAGGCTTGGTTAGCGCTCGGCCTGCCCCTGGTGGGGTGGGACGACGCA
AGCAGGCACCAGGCCCTGGGCATGGACGACATCCTTCTCCTTTCCTCAGT
GCTCAGCTCCGCCGACGAAGTGGCAGCCCTAGCCATGGTCAATAAGAACC
AGCACCCGAAGTTGAGTGCCTTGCTTTTTGGCGAAGGCGTGCTAAACGAT
GCCGTCTCCATCCTTCTCTTCCGGTCCGTGCTCAAGGGCGATGCCGAGTC
GAGCCTTTACGCAGTCACTGTGGCTTGGACAGCCCTCTTTCTCCTCTTCT
CCTCCACTCTTGTGGGGCTGGCCGTGGGCCTTTGTATTTCTCGTCTGCTC
AAGGTGAACACCGGCCTCAACAACCACCCAACCCGTCAGACCATTATCAT
CGTTCTGGGGTGCTACGTCTCCTACGCCCTCGCGGAGCTCCTGAACATCA
ATGGGGTACTGTCCGTGTTTGTCTGCGGTATCATCTTCTCACACTTTGCC
TGGCATTCCCTTGCTCCAGAAGCGAAGATCGGCACGgtaagaattttagt
ttaatagacttgaaaggtagtaaggagggtagatatggtgatccccatgc
acctgcgctttctgcccgctcggtttggtcgtgttttccatggagaaagc
tttccctcttcagtagattcagctgaagttcaaggttttcggtagctcgc
tcctccaattcgcgtctatctgcctcctttccatcacacatcaaattgca
cacagGCTATCTTTTCTCGCGCCTTGTCGCAGATCGCCGAAATCTACTCC
TTCACGGCTTTAGGGCTTAGTGTCTATCGCTTCCAAACCAGCGATTTCTC
TTTCCGTTACCTCTGTATCTCTTTCCTTGCCATGGCCCTTGCGCGAGCGG
TTGTGGTGTTCGGGCTTTTCGGGTTAGCCATGTATTTTGACCGAAAGCAC
ATGTTCAAGGAGGCATGGAAGGACCAGCTCGTTTTATTTGGGGCGGGGCT
TGTGAGGGGCGCAATTACGTGGGCGCAGgtacgcatgttattttgataag
cggtgcagggggctacggtcgtatccctgtgtgcctgcgctgcaggtgca
cctcacggaagtgtttttcctgtcctgtttccctttgatattccaatcct
cgctcatctcaccctttcctatccgtaaatgcagGCCTTGCAGCTACCAG
GAGGCAATCGGCGGGTCCTTATCTCCACCACTCTTCAAGTCATCTCCATC
ACGCTTGTAGTAGTAGGTGGGGCCCTACCATCCCTGCTTCGAGCCCTGGG
CATGGGTGAAACCGAATCTCTTGACCCGGGCGAGATGGAAGGAGTAACCG
AGGCAGTCACCTGCAGTGCCTATGACGTGGAAGGGGAAGACTTGCCGAAT
AGCAGCAGCATTGGTGATTTTCAGGACGCAATGCCCTTTCTCTCACATAC
AGCCTCGTCGGAAGACGTCCGCCCGCTCCTTCTCAGCAATCACAGTAGTC
TGAGCAGCAACGGTGGGGGTAGCATTCGAGTGGTCAAGCAGCAGCAGCAG
CAGCAGTTGGACCCCTTTCCTGACGCGCCCCCCCGTCTACGACGGCCGGG
GGAAGAGGCGACATTGTTGGACGAGAGCTGGGTGGTGGATGGGAGCCGCG
TATTCGAGGGACGGGTGCACAGAATGTGGGCTGGGATTGACGAGGCTTTG
AAGCCTTTCTTTGGGGGCCGCAGTCGTTTACCGACTTTCCACGGCTCGTA
TGTGAGCTACAGTAATAACACTGGGGGGAGCTATGCGAGGAGCAGCGGTG
CGAGCCTCATAACAGTCCGTCCGGGTCATGAAGGGTACGGCACTTTGGCT
GCTTTACCGCCATCGGCAGCAGCAACAGCAACAATGGCAGAATTAGCTGT
TGCTGCAGCAGCAGCAGCAAGAGCAGGAGGAGGGGAAGGAGGAGGAAGAG
GGAAGGTGGGTGTGGCCTTCCCGGATGGTGGCATGCAGAAAGGTGGGAGT
GGTCAAGGCGCTGGCGATGGTCTTATTGGTGGTGGCGCCAACACCAGAAC
CACCAGTAGAAGCACCAGTCGCGGCAAAATCGATCCTTATGCTTTGCAAG
CGGCCTTTATCTCCAAAGGCTTTCGCGTCCCAAAGCGGACCTTGAGCAAG
CTGGCCAGTCAGAAACCTGACGGCTCCTCGGAACGGAAAATGCGGGTTAG
TAAGAGCTCGAATGCGGCCAAGAAATAG
back to top

protein sequence of NO11G00780.1

>NO11G00780.1-protein ID=NO11G00780.1-protein|Name=NO11G00780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=805bp
MGESIPTIGFEEASQELLSSSYNASPLYHSSMMRTHSSVKEHTQPPGGLS
TMLTDLPPSVLSLLLNIILIFLTIYLSNASDYLRDIVHKNPNLRFRFLLR
LVSDMPESTIAVAGGMLLGLLLSKSFHIRTQFSQEVFFYLILPPIIFYQG
YSLKKRNFFRFFHYIFTLGVVGTIINMGVVAICLVSLNKAWLALGLPLVG
WDDASRHQALGMDDILLLSSVLSSADEVAALAMVNKNQHPKLSALLFGEG
VLNDAVSILLFRSVLKGDAESSLYAVTVAWTALFLLFSSTLVGLAVGLCI
SRLLKVNTGLNNHPTRQTIIIVLGCYVSYALAELLNINGVLSVFVCGIIF
SHFAWHSLAPEAKIGTAIFSRALSQIAEIYSFTALGLSVYRFQTSDFSFR
YLCISFLAMALARAVVVFGLFGLAMYFDRKHMFKEAWKDQLVLFGAGLVR
GAITWAQALQLPGGNRRVLISTTLQVISITLVVVGGALPSLLRALGMGET
ESLDPGEMEGVTEAVTCSAYDVEGEDLPNSSSIGDFQDAMPFLSHTASSE
DVRPLLLSNHSSLSSNGGGSIRVVKQQQQQQLDPFPDAPPRLRRPGEEAT
LLDESWVVDGSRVFEGRVHRMWAGIDEALKPFFGGRSRLPTFHGSYVSYS
NNTGGSYARSSGASLITVRPGHEGYGTLAALPPSAAATATMAELAVAAAA
AARAGGGEGGGRGKVGVAFPDGGMQKGGSGQGAGDGLIGGGANTRTTSRS
TSRGKIDPYALQAAFISKGFRVPKRTLSKLASQKPDGSSERKMRVSKSSN
AAKK*
back to top
Synonyms
Publications