NO11G00710, NO11G00710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00710 vs. NCBI_GenBank
Match: WP_051707657.1 (MULTISPECIES: SDR family oxidoreductase [Streptomyces]) HSP 1 Score: 121.7 bits (304), Expect = 3.700e-24 Identity = 94/257 (36.58%), Postives = 133/257 (51.75%), Query Frame = 0 Query: 5 LKGKRCLVTGGTEPASVGYVSALACLAAGAVHVVVVGRDLAKMGSAVPAGLSGLEGNLKKPETMAELVGAAVDKLGGGLDVLIVSGGNGYSEYLGLDPTDAASYHLMYDMAVLSPMFLVAAAAPFLSQAPNGGGSVVMVSSLAAHCPWPDTAPFNLAKAAQNALVETLAFKHRQDGFRVNGVLPGCIHTKALDV----MAVKKGRDLGEYAS--LRANAIPMGRNGTPEEVAQAVLFLASPASSYMTGTLLPVDGGL 256 L+G R +VTGGT V LA AAGA V V R+ + VPAG+ + G+L E AA++ L GG+DVL+ + G G+ + D +LS + + P + G G+VV VSS AA P P+ P+ AKAA N+ ++LA G RV V+PG + T A++ A + GRDL + + + A P+GR G PEE A+ + FLASP +SY+TG +PVDGG+ Sbjct: 18 LRGARAVVTGGTRGIGAATVRRLA--AAGARVVAVARRE-----ADVPAGVRLVTGDLSAREGAETAARAALEHL-GGIDVLVDNAGRNTQVPDGVLAASDDDWLANLDTNLLSVVRVDRVLVPHM--VAQGHGAVVHVSSNAARYPQPNGVPYAAAKAALNSYSKSLALACGPHGVRVTAVMPGVVETDAVEASLRQAAERTGRDLKDLRTEFHQRLAAPLGRPGRPEEAAELIAFLASPRASYLTGITVPVDGGI 264
BLAST of NO11G00710 vs. NCBI_GenBank
Match: WP_027756196.1 (SDR family NAD(P)-dependent oxidoreductase [Streptomyces sp. CNH099]) HSP 1 Score: 121.3 bits (303), Expect = 4.800e-24 Identity = 92/257 (35.80%), Postives = 138/257 (53.70%), Query Frame = 0 Query: 4 DLKGKRCLVTGGTEPASVGYVSALACLAAGAVHVVVVGR--DLAKMGSAVPAGLSGLEGNLKKPETMAELVGAAVDKLGGGLDVLIVSGGNGYSEYLGLDPTDAASYHLMYDMAVLSPMFLVAAAAPFLSQAPNGGGSVVMVSSLAAHCPWPDTAPFNLAKAAQNALVETLAFKHRQDGFRVNGVLPGCIHTKALDVMAVKKGRDLGEYASLRANAIPMGRNGTPEEVAQAVLFLASPASSYMTGTLLPVDGGLGLS 259 D GK +VTG + +G +A A AGA HV+ VGR D + +A G++ +L+ P+T ++GAAV++ G LDVL+ G ++ + L T AA ++D+ V +P L AA P L ++ GS+V +SS H P P A + +KAA L T A + DG RVN V PG ++AL + + + + IP+GR G P EVA +L LA PA++++TG +L +DGGL L+ Sbjct: 8 DQTGKVVVVTGA--GSGIGRATARAFADAGA-HVLGVGRRGDALEETAAGYPGIAAHPADLRAPDTAHRVIGAAVEQ-WGRLDVLV--NNAGATKMMPLAETTAAGITALFDLNVTAPSLLAQAALPHLRRS---RGSIVNISSTYGHRPLPGAAHYAASKAALEQLTRTWAVELAADGIRVNAVAPGPTESQALAAAGLPE-TAIEHIKQQETSRIPLGRRGEPHEVATWILRLADPATTWLTGQVLTLDGGLELT 254
BLAST of NO11G00710 vs. NCBI_GenBank
Match: WP_019737232.1 (SDR family NAD(P)-dependent oxidoreductase [Mycobacterium kumamotonense] >OBY30266.1 short-chain dehydrogenase [Mycobacterium kumamotonense]) HSP 1 Score: 119.4 bits (298), Expect = 1.800e-23 Identity = 97/258 (37.60%), Postives = 134/258 (51.94%), Query Frame = 0 Query: 4 DLKGKRCLVTGGTEPASVGYVSALACLAAGAVHVVVVGRDLAKMGSAVPAGLSG----LEGNLKKPETMAELVGAAVDKLGGGLDVLIVSGGNGYSEYLGLDPT---DAASYHLMYDMAVLSPMFLVAAAAPFLSQAPNGGGSVVMVSSLAAHCPWPDTAPFNLAKAAQNALVETLAFKHRQDGFRVNGVLPGCIHTKALDVMAVKKGRDLGEYASLRANAIPMGRNGTPEEVAQAVLFLASPASSYMTGTLLPVDGG 255 +L+ + LVTGGT A +G SA LAA VV+ GRD + G+ A L+G ++ +L + +A LVG A G +D+L+ + + PT D AS+ M+D V FLVA AA + + G GS++ ++S AA +P T+ + KAA AL T A + G RVN V PG T M GE+ A +P+ R PEE+AQAVLFLASP +SY+TG+ L VDGG Sbjct: 2 ELRNRIALVTGGT--AGIGLESA-RLLAAEGAEVVISGRD-GERGARAVAELAGKATFVQADLSDLDAVARLVGQA-----GDIDILV-----NNASVFPVAPTVEQDVASFDQMFDTNVRGTYFLVAEAARGMIE--RGRGSIINITSTAADKGFPGTSVYGATKAALAALTRTWAAEFGAHGIRVNSVSPGPTRTPGAAAM--------GEFIDDIAATLPLARTAGPEEIAQAVLFLASPRASYVTGSTLFVDGG 235
BLAST of NO11G00710 vs. NCBI_GenBank
Match: WP_100226988.1 (SDR family NAD(P)-dependent oxidoreductase [Mycobacterium avium]) HSP 1 Score: 119.4 bits (298), Expect = 1.800e-23 Identity = 97/258 (37.60%), Postives = 134/258 (51.94%), Query Frame = 0 Query: 4 DLKGKRCLVTGGTEPASVGYVSALACLAAGAVHVVVVGRDLAKMGSAVPAGLSG----LEGNLKKPETMAELVGAAVDKLGGGLDVLIVSGGNGYSEYLGLDPT---DAASYHLMYDMAVLSPMFLVAAAAPFLSQAPNGGGSVVMVSSLAAHCPWPDTAPFNLAKAAQNALVETLAFKHRQDGFRVNGVLPGCIHTKALDVMAVKKGRDLGEYASLRANAIPMGRNGTPEEVAQAVLFLASPASSYMTGTLLPVDGG 255 +L+ + LVTGGT A +G SA LAA VV+ GRD + G+ A L+G ++ +L + +A LVG A G +D+L+ + + PT D AS+ M+D V FLVA AA + + G GS++ ++S AA +P T+ + KAA AL T A + G RVN V PG T M GE+ A +P+ R PEE+AQAVLFLASP +SY+TG+ L VDGG Sbjct: 27 ELRNRIALVTGGT--AGIGLESA-RLLAAEGAEVVISGRD-GERGARAVAELAGKATFVQADLSDLDAVARLVGQA-----GDIDILV-----NNASVFPVAPTVEQDVASFDQMFDTNVRGTYFLVAEAARGMIE--RGRGSIINITSTAADKGFPGTSVYGATKAALAALTRTWAAEFGAHGIRVNSVSPGPTRTPGAAAM--------GEFIDDIAATLPLARTAGPEEIAQAVLFLASPRASYVTGSTLFVDGG 260
BLAST of NO11G00710 vs. NCBI_GenBank
Match: WP_029124092.1 (SDR family NAD(P)-dependent oxidoreductase [Salinispora pacifica]) HSP 1 Score: 119.0 bits (297), Expect = 2.400e-23 Identity = 96/258 (37.21%), Postives = 138/258 (53.49%), Query Frame = 0 Query: 4 DLKGKRCLVTGGTEPASVGYVSALACLAAGAVHVVVVGR---DLAKMGSAVPAGLSGLEGNLKKPETMAELVGAAVDKLGGGLDVLIVSGGNGYSEYLGLDPTDAASYHLMYDMAVLSPMFLVAAAAPFLSQAPNGGGSVVMVSSLAAHCPWPDTAPFNLAKAAQNALVETLAFKHRQDGFRVNGVLPGCIHTKALDVMAVKKGRDLGEYASLRANAIPMGRNGTPEEVAQAVLFLASPASSYMTGTLLPVDGGLGLS 259 DL +VTG + +G +A A AGA HV+ VGR LA+ + PA ++ +L P T +++ AAVD+ G LDVL+ + G + + L T AA ++D+ V++P L AA P L ++ GS+V VSS H P P A + +KAA L + A + DG RVN + PG ++AL + + E A IP+GR G PEEVA +L LA PAS+++TG +L VDGGL L+ Sbjct: 8 DLTAHAVVVTGA--GSGIGRATAHAFARAGA-HVLGVGRRKDALAETAAGHPA-IAVHPADLNDPGTPQQVIAAAVDR-WGHLDVLVNNAGT--TRIMPLAHTTAAGIAALFDLNVVAPSLLAHAALPHLRRS---RGSIVNVSSTYGHRPLPGAAHYAASKAALEQLTRSWAAELATDGIRVNALAPGPTESQALAAAGLADPA-IEEIKRAEAARIPLGRRGDPEEVAAWILRLADPASTWLTGQVLTVDGGLELT 254
BLAST of NO11G00710 vs. NCBI_GenBank
Match: WP_067378316.1 (SDR family NAD(P)-dependent oxidoreductase [Streptomyces olivochromogenes] >KUN42521.1 short-chain dehydrogenase [Streptomyces olivochromogenes] >GAX57214.1 short-chain dehydrogenase [Streptomyces olivochromogenes]) HSP 1 Score: 119.0 bits (297), Expect = 2.400e-23 Identity = 95/261 (36.40%), Postives = 139/261 (53.26%), Query Frame = 0 Query: 4 DLKGKRCLVTGGTEPASVGYVSALACLAAGAVHVVVVGRDLAKMGSAVPA-GLSG-----LEGNLKKPETMAELVGAAVDKLGGGLDVLIVSGGN---GYSEYLGLDPTDAASYHLMYDMAVLSPMFLVAAAAPFLSQAPNGGGSVVMVSSLAAHCPWPDTAPFNLAKAAQNALVETLAFKHRQDGFRVNGVLPGCIHTKALDVMAVKKGRDLGEYASLRANA-IPMGRNGTPEEVAQAVLFLASPASSYMTGTLLPVDGG 255 + + ++ LVTGG +G+ +A + GA VV+ GR AV G G L+ +L+ PE++ LV A D +DVL+ + G + GLD ++ +++ V P FL AA A A GGGS+V V+++AA P TA + KAA +L T A + G RVN V PG HT+ +V+ + +GE + R A +P+GR PEE+A+A+LFLASP +SY+TGT+L VDGG Sbjct: 2 EFRDRKALVTGGA--TGIGFATARLLVREGA-EVVIAGRSEEAGAKAVAVLGEHGGRARFLQADLRDPESVRRLVAEASD-----VDVLVNNAGAFPFAPTAEQGLD-----AFQQLFETNVRGPFFLTAALAQ--KMAARGGGSIVNVTTIAAQRGIPGTAAYGSTKAAVESLTRTWAVEFGSLGVRVNAVAPG--HTRTRNVVGM-----IGEESFERIGAEVPLGRLAAPEEIAEAILFLASPRASYVTGTVLTVDGG 240
BLAST of NO11G00710 vs. NCBI_GenBank
Match: KXZ46727.1 (hypothetical protein GPECTOR_41g692 [Gonium pectorale]) HSP 1 Score: 119.0 bits (297), Expect = 2.400e-23 Identity = 98/268 (36.57%), Postives = 139/268 (51.87%), Query Frame = 0 Query: 9 RCLVTGGTEPASVGYVSALA-CLAAGAVHVVVVGRDLAKMGSAVP----AGLSGLEGNLKKPETMAELVGAAVDKLGGGLDVLIVSGGNGYSEYLGLDPTDAASYHLMYDMAVLSPMFLVAAAAPFLSQAPNGGGSVVMVSSLAAHCPWPDTAPFNLAKAAQNALVETLAFKHRQDGFRVNGVLPGCIHTKALDVMAVKKGRDLGEYASL-------RANAIPMGRNGTPEEVAQAVLFLASPASSYMTGTLLPVDGGLGLSSWFNTP 265 R LVTG AS G +A+A A V VV R AK+ + + +G L +L E++ LV AVD L GGLDV++ + G G D ++ + M VLS + + AA P L A +G G +V +SS A P P AP+ AKAAQ+ L +TLA + G RV GV PG +HT L++ + + A++ + +P+GR G P EVA AV +LA+ + +TG +LPVDGG L+S F+ P Sbjct: 9 RVLVTG----ASEGIGAAIARKFAENGARVAVVSRSQAKLDALIATLTGSGHLALPADLSNTESLPSLVEQAVDAL-GGLDVVVNNDG-----VSGPGLLDVEAWQAQFTMQVLSAIAIARAAQPAL--AASGRGVLVNMSSGLAQMPSPSFAPYGGAKAAQDMLTKTLALQWAPSGIRVVGVAPGPVHTPGLELALLSSAPPGADRAAVIEGGLKYMGSMLPLGRVGQPSEVADAVYWLAASGGN-ITGVILPVDGGALLTSAFSAP 263
BLAST of NO11G00710 vs. NCBI_GenBank
Match: WP_083081392.1 (SDR family NAD(P)-dependent oxidoreductase [Mycobacterium kumamotonense] >ORA78840.1 short-chain dehydrogenase [Mycobacterium kumamotonense]) HSP 1 Score: 119.0 bits (297), Expect = 2.400e-23 Identity = 97/258 (37.60%), Postives = 134/258 (51.94%), Query Frame = 0 Query: 4 DLKGKRCLVTGGTEPASVGYVSALACLAAGAVHVVVVGRDLAKMGSAVPAGLSG----LEGNLKKPETMAELVGAAVDKLGGGLDVLIVSGGNGYSEYLGLDPT---DAASYHLMYDMAVLSPMFLVAAAAPFLSQAPNGGGSVVMVSSLAAHCPWPDTAPFNLAKAAQNALVETLAFKHRQDGFRVNGVLPGCIHTKALDVMAVKKGRDLGEYASLRANAIPMGRNGTPEEVAQAVLFLASPASSYMTGTLLPVDGG 255 +L+ + LVTGGT A +G SA LAA VV+ GRD + G+ A L+G ++ +L + +A LVG A G +D+L+ + + PT D AS+ M+D V FLVA AA + + G GS++ ++S AA +P T+ + KAA AL T A + G RVN V PG T M GE+ A +P+ R PEE+AQAVLFLASP +SY+TG+ L VDGG Sbjct: 2 ELRNRIALVTGGT--AGIGLESA-RLLAAEGAEVVISGRD-GERGARAVAELAGKATFVQADLSDLDAVARLVGQA-----GDIDILV-----NNASVFPVAPTVEQDVASFDQMFDTNVRGTYFLVAEAARGMIEC--GRGSIINITSTAADKGFPGTSVYGATKAALAALTRTWAAEFGAHGIRVNSVSPGPTRTPGAAAM--------GEFIDDIAATLPLARTAGPEEIAQAVLFLASPRASYVTGSTLFVDGG 235
BLAST of NO11G00710 vs. NCBI_GenBank
Match: WP_003898131.1 (SDR family NAD(P)-dependent oxidoreductase [Mycobacterium smegmatis] >YP_890961.1 oxidoreductase, short chain dehydrogenase/reductase [Mycobacterium smegmatis str. MC2 155] >ABK73872.1 oxidoreductase, short chain dehydrogenase/reductase family protein [Mycobacterium smegmatis str. MC2 155] >AFP42997.1 Short-chain dehydrogenase/reductase SDR [Mycobacterium smegmatis str. MC2 155] >ELQ85541.1 3-oxoacyl-[acyl-carrier-protein] reductase [Mycobacterium smegmatis MKD8] >AIU11718.1 short-chain dehydrogenase [Mycobacterium smegmatis str. MC2 155] >AIU18343.1 short-chain dehydrogenase [Mycobacterium smegmatis] >AIU24965.1 short-chain dehydrogenase [Mycobacterium smegmatis] >CKI63295.1 short-chain dehydrogenase [Mycobacterium smegmatis]) HSP 1 Score: 118.6 bits (296), Expect = 3.100e-23 Identity = 94/255 (36.86%), Postives = 134/255 (52.55%), Query Frame = 0 Query: 4 DLKGKRCLVTGGTEPASVGYVSALACLAAGAVHVVVVGRDLAKMGSAVPA----GLSGLEGNLKKPETMAELVGAAVDKLGGGLDVLIVSGGNGYSEYLGLDPTDAASYHLMYDMAVLSPMFLVAAAAPFLSQAPNGGGSVVMVSSLAAHCPWPDTAPFNLAKAAQNALVETLAFKHRQDGFRVNGVLPGCIHTKALDVMAVKKGRDLGEYASLRANAIPMGRNGTPEEVAQAVLFLASPASSYMTGTLLPVDGG 255 +L+G LVTGGT + +G SA A GA VV+ GRD A+ G A G ++ +L +++A+L A D +D+L+ + G Y + D D A + ++D V FLVAAAA G GS+V +++LAAH +P T+ + KAA +L T A + +G RVN V PG T LG++ A +P+ R PEE+AQAVLFLASP +S++TG+ L VDGG Sbjct: 2 ELEGLTALVTGGT--SGIGLESARLMAAEGA-DVVITGRD-AQRGEQAAADIGHGARFVQADLGDLDSVADLAAQAPD-----VDILVNNAGI-YPQASTFD-QDVAGFQQLFDTNVRGTYFLVAAAAK--GMVARGHGSIVNITTLAAHKGFPGTSVYGATKAALESLTRTWAAEFGANGVRVNSVSPGPTRTPT-------TLEQLGDFIDDVAAGLPLRRTAAPEEIAQAVLFLASPRASFVTGSTLYVDGG 236
BLAST of NO11G00710 vs. NCBI_GenBank
Match: WP_051840281.1 (SDR family oxidoreductase [Streptomyces sp. NRRL F-5126]) HSP 1 Score: 118.6 bits (296), Expect = 3.100e-23 Identity = 94/257 (36.58%), Postives = 132/257 (51.36%), Query Frame = 0 Query: 5 LKGKRCLVTGGTEPASVGYVSALACLAAGAVHVVVVGRDLAKMGSAVPAGLSGLEGNLKKPETMAELVGAAVDKLGGGLDVLIVSGGNGYSEYLGLDPTDAASYHLMYDMAVLSPMFLVAAAAPFLSQAPNGGGSVVMVSSLAAHCPWPDTAPFNLAKAAQNALVETLAFKHRQDGFRVNGVLPGCIHTKALDV----MAVKKGRDLGEYAS--LRANAIPMGRNGTPEEVAQAVLFLASPASSYMTGTLLPVDGGL 256 L G R +VTGGT V LA AAGA V + R+ + VP G+ + G+L + E +A++ L GG+DVL+ + G G+ + D +LS + + P ++ G G+VV VSS AA P P+ AP+ AKAA NA ++LA G RV V+PG I T A++ A + GRDL E + A P+GR G PEE A+ + FLASP +SY+TG + VDGG+ Sbjct: 18 LHGARAVVTGGTRGIGAATVRRLA--AAGARVVAIARRE-----AEVPDGVRLVTGDLFRREGAEAAARSALEHL-GGIDVLVDNAGRNAQVPDGVLAASDDDWLANLDANLLSVVRVDRVLVPHMT--ARGHGAVVHVSSNAARYPQPNGAPYAAAKAALNAYSKSLALACGPHGVRVTAVMPGVIETDAVEASLRQAAERTGRDLEEIRKEFHQRLAAPLGRPGRPEEAAELIAFLASPRASYLTGITVSVDGGI 264 The following BLAST results are available for this feature:
BLAST of NO11G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00710 ID=NO11G00710|Name=NO11G00710|organism=Nannochloropsis oceanica|type=gene|length=855bpback to top protein sequence of NO11G00710.1 >NO11G00710.1-protein ID=NO11G00710.1-protein|Name=NO11G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=285bpback to top Synonyms
Publications
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