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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr10 | genome | chr10:1010687..1015236 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Homology
BLAST of NO10G03560 vs. NCBI_GenBank
Match: EWM25329.1 (hypothetical protein Naga_101034g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 85.1 bits (209), Expect = 1.400e-12 Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = 0
Query: 997 DSGSLWPDITVVSAHEVAPVQHAVADQSYTLLLEGFAMKAEVVVELFQGTQSSG 1051
D GSLWPD+T+VS HEVAPVQHAV Q Y +LLE FAMK +VVVELFQGT+ G
Sbjct: 1 DKGSLWPDVTLVSPHEVAPVQHAVVGQPYKVLLENFAMKGDVVVELFQGTEKKG 54
BLAST of NO10G03560 vs. NCBI_GenBank
Match: XP_005852474.1 (hypothetical protein NGA_0689200 [Nannochloropsis gaditana CCMP526] >EKU23358.1 hypothetical protein NGA_0689200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 80.1 bits (196), Expect = 4.600e-11 Identity = 40/109 (36.70%), Postives = 54/109 (49.54%), Query Frame = 0
Query: 228 GGSLDIRFVSVFKAYGRAPSE--------------DLRIVAGGVALVRLGGFFRGTAVIFREPTQTFKAFQGALERPYQRRRKYGGHVLVLGGSFFCYGCQIIRWNPYG 323
GG L++R V ++K G + ++ G V LGG FRG+ V+FR T + F L+ P + RR +GGHV V GG F CYGC I +PYG
Sbjct: 3 GGKLELRSVCLYKGSGESLGALGGGRKLQSGLGIGKTKLTMGPAVYVHLGGVFRGSGVVFRSMRGTLEGFLKTLQEPLEARRTFGGHVFVAGGQFLCYGCFFIGVSPYG 111
BLAST of NO10G03560 vs. NCBI_GenBank
Match: EWM26817.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana]) HSP 1 Score: 74.3 bits (181), Expect = 2.500e-9 Identity = 60/192 (31.25%), Postives = 92/192 (47.92%), Query Frame = 0
Query: 158 CSPVDGPDLERMVAGSSTCGVILLTKGSMVPYFTENTMVVSTRKIIVGHPIDLPQIRTVGKLERVFDVVSGGSLDIRFVSVFKAYGRAPSEDLRI-VAGGVALVRLG--GFFRGTAVIFREPTQTFKAFQGALERPYQRRRKYGGHVLVLGGSFFCYGCQIIRWNPYGGILLNVFQLGRDFLVVAGTSVMTG 347
C+P G L +V + +C VI LT G V Y + + V +I+G P+ LP I + R F V + G LD+RFV V++ A +++ + + GGVA +R G G F G ++ + L R YGG +L+ G+ C ++ P G +L V+ +G LVV+G MTG
Sbjct: 188 CTPDTGVQLRSLVE-TGSCPVITLTPG--VRYVLDEEIHVRRAVVIIGRPLTLPVI-DAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVGDVLLASDLR---VTARLYGGFLLLEAGTLRVRDCHMLLQRP-GVLLREVYTVGGYILVVSGNLFMTG 371
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G03560 ID=NO10G03560|Name=NO10G03560|organism=Nannochloropsis oceanica|type=gene|length=4550bp
ATGAACGAGGCCGGGCCCCAAGAGGAGTCCCGACGCCGTCGCCGGCGTGT
TCTACTGGGCTCGCTGGGTGCAGTGTGTCTGATCGTCGGTGCCGCGTTGG
CCATAACCTTTGCTGGAAAGGGCCAGGGCAAGAATAAGCCGGAGCCGGCG
GCCACTGTAGAGGGGAATTTGTCTCCGATGGGAGACCTTCCAGGCCTTGT
GAAGGATTCAGgtgagaaaacataaggggaggacggcaggaaatggaggg
tgcacaccctgtgcgcagaactgaccccctgagttgacctcttggagctc
tagtggtggtagtgctggtggtgctgcccgcactatctgaatgtgtacaa
tgtcgagccccctcattgaatgtatcttcttatgccttcgacgaacgtat
cttgtgtccctgccattctcttcttggccgctttaatcgcatcaaggggc
agctccgacacctccggtgcaccgattctttgccggctttgcttccctaa
ctcgctccttttgccctctccttttccccctcttgcaccgctctgatgat
cagcagcattaccccttaccataacgattcaatcgtttctctgacacatc
tccgtttcccacctccctctctcctgcgctacagTGCTGTCAACCAACGC
GGGCACCACCGGTGCCGCTCCGAAATCCGTAGGTACGACGGTGACGCCCG
CTGTCCCCACAGCATCGAAGGCAGCGCCTGCTGAGGGTACTGGCGACCTC
ACGTTTCAGAACTTCCTCGAAACCGGCACGGTGGGAGGCGTTGGCCTCGG
CGCGGCACTGGGTGCTTTGCCCGGGGCCTCGACCGTGAATGGAGCCTTCA
ACGGCTTGGCGAGTAATTTGGCCAACCTGGCAGGCCTTCGTGTCTGCTCT
CCCGTGGATGGTCCTGATCTGGAGCGAATGGTGGCGGGCTCGAGCACTTG
CGGCGTCATTCTCCTGACGAAGGGCTCTATGGTCCCATACTTCACGGAGA
ACACGATGGTTGTGTCAACCCGCAAGATTATCGTGGGCCACCCTATTGAC
CTTCCTCAAATTAGGACGGTAGGGAAACTAGAGCGGGTCTTTGACGTGGT
GTCGGGGGGCTCCTTGGACATTCGTTTCGTGAGCGTCTTCAAAGCATACG
GCCGAGCACCCTCAGAGGACCTCCGTATCGTCGCCGGGGGTGTTGCGTTG
GTGCGCTTGGGAGGCTTCTTCCGCGGTACGGCCGTGATTTTCCGCGAGCC
TACTCAGACTTTCAAAGCCTTTCAAGGCGCGCTGGAGCGCCCCTATCAGC
GTCGCCGCAAGTATGGCGGGCACGTCCTGGTCTTGGGAGGCTCCTTCTTT
TGTTACGGATGTCAGATAATCCGGTGGAACCCTTATGGCGGGATTCTTTT
GAACGTTTTCCAGCTTGGTCGTGATTTCTTGGTTGTTGCCGGGACGAGCG
TCATGACTGGCGTCTATCATTTGGCCTTCACACCTTTCGGAAGCGCAGTC
AGCGTTGGAAATGCTATCGCTGTCCTGGGCGGCGTCAGTGTTCGCATTGG
CGGCGGAACAGAGGGGGTTGCGATTCTCAAGGGACAATTTGgtaggtcgt
gcgtgggtgaaggagacgagggatagaaggggaacagtagcaaaaaggca
ttcaatagcatcatgacaggtcatcattggcgaagtaggaaagccttgga
cgcacgaaagccttggacgcacctaacactcatccccaaccaaaatacac
acacgaacataatcatactcgcgcacgacagGTGCCGGCCAGAATATATT
CGTGGGCGGTGGGGTGCTCGTGAATGTGGGCCATCAGCAGCAGACCGCCT
TTGTGTGCCTTGTGCGTGCGGGCTACGGCATGACTGCTATGGGTGCTGGG
GTGTTTGTACTTATTGCGGAGCTTGAGAACCGTGCGTGGGGTGTGGCTTC
CATCTTCGGTGCCGGGCAGGTGTACTCCAACGGCGCGGGCGTTATGGACA
AGACTGGTGGAGAGGTCGTCAACAGTGCTATTTCGGCCTTCCAAGCCCTG
GCCGGCGGGTCCGCgtacgtcagatttctctctctataccccgttccttc
tctcatgtttcattgcttacagaggagactagagtgtgttttgtcttgct
gaaatatatgcaataccttttgggggttgtgtgacaggaagcggccaagg
tacagcactcactccatccatattttttcctccttctatttctcccaccc
atgatagCTATTTGGGCGCGGGTGACATGAACATTGTGGGCGAACAGTTT
GCGCGACTTGCTTTAACCCTGGACCAGAATGGCGTTGGCATGACTTTCTT
TAACGGGGCTGGGCACGGAACTATGATCTACGTCCCCAGTTTGGTGATTT
GCCTCGTCCGTTCTCAGAAGATTCTCGGTGCCGAGgtacgtctggctatg
cgagatgcgaattccgtctgtccgtttcgcgtttttgatgatcgatgtgt
ctgtcggtccctctcctctgattctaattttggtttttgtccttgtcctc
gtatgtattgtttcgcctctctgtgtttcctgtatcgattgtgtttgtgc
ccgcaacctacctgtctctgcactcatccacggactcttaactgagtgct
ctcgcgggactgaaccctggtagttgaagggcttgtctgtaatctgtcgg
cgttttttcctcacacacacacactctccccatcgctttcttcgatgaat
atgcccccccatgaagtgtggtctcatatatctctttgatgtctcactcc
aacttgtttagGTCTTCCAAGGAGCCGGGTTTCACACAGAAGTCAACAAT
ACACGCTGGACAATTCAATTGGTGAATGCGCAAATGCCGGGTTATGAAGG
CTGGATCGGGCTGGGTGCCTCTCTGATGATCCGGTCGCGGACCACTGTCA
GGCGTCTGGTGAACTACCGCGCTGCCAAGAAAGTGGCTTGGGTGGTGAAT
GGGGTCGGTGTCAACGAATCGCTGAGGAGCAACTTCAACATTTTTACCGA
CAAGAACGGCACGACAGTCCTGAAGCCGCACGCTAAAAATGGCAAGCACC
GACTCCTGGAAGCTGTGGATGAACTTGTGAGCAGTGCTGCCAGCACATCC
AACAGGCGGGCCCTTATTAAAGGTTTTAGTCGTCCTGCTTTGAGCATGGC
CGACAGTGTGATGGACTCGAAGAAGGTTCAGCCTCCTAACCCCGGGATTC
TGGCCGAAAAACTGCAGGCCCTGGTGTCGGGTTTGAAGAATAAACGCCGT
CTCAAAGGGCAAGCCGCGGTCAACCCCACCCGTATCATGAACATGTTCCA
AGGCCTGTCGCCAGCCTCGCTCATGAAAGCTTGGCAAGAGGCCGTGGACG
AGACTAACAACAACAATGCTCTCGGTAGCAACACCAACGATCGTGCCTTG
GCTGCAGGAAACGATGCCGACGAGGTGGACGCCGACGGCCGGTGGGGCGA
ACAGGTgtacgtgggcggcggtgatgcctcgcagtgtgtgctgtgcgggg
tcggtcccgggacgaccgagtcccactggaacagggacgcaggcgacgac
ccagccacctgccatatcacggaggcatgcactcctgcagattcagTCCA
AGGCATCATGGGGAAGCTCAGAGGAGCCTTGCCGGATGGGGAAGACTTAG
TATTGTCGCCCGCGGCGAAGGCTGGGCCAAGACGGTGGGCTCCAAGTACA
CGGCGCGTCTCTTGCAAGATATCGACGATCACCAGGCGGAGAATCCCGGG
GCGGATATCAAGCTGCCGGACACGAACATTTTGACCTACGACATTTTCCT
GTACTGCCCCGTGGCCGATGCGGAGTGTGAGTATAGCCAGGCAAACATGA
AGGCGGCATTCCAAGACTATCTCGACGATGTGGCGCAGGAGGAGACTGCG
TTCAAGATTTCGTCGGCGACTGCAGCGGTGCATCCGGCTATCTCTAAAAT
TGTGAATGATGCTGACGGAGACTTTGTGTCGGCCATTGGGGCGCCGGCGC
TAGAGGGGTGTGGGAAGGGCCTCTCGTTTTCTCTTTTCGTGACGGCGCCC
GACAAATCTTCGGTGACGGATGTGAAGACTATCCTGGAAAAAGCAGGTAC
CGACAGTGATGAACTTCTGGCCTTCATCAACGACCAAGGGGAGCAGGAAG
CATCCTTCTGCAGCGTGAGCGTGACGAAGCGCTCAGCAATGTTTTTCCCG
TCCGTGGACACGGCGGCAGGGAAGAGCTTCTATCAGAAGCTTTACACGGG
CAACGCGCTGGATTCCGGGAGCCTCTGGCCCGACATCACGGTGGTGTCGG
CGCACGAGGTGGCCCCCGTTCAGCACGCAGTGGCGGATCAGTCCTACACA
CTTTTGTTGGAGGGCTTTGCCATGAAGGCGGAAGTGGTGGTGGAGCTGTT
CCAGGGCACGCAGAGCAGCGGGTGGAGGTGGCCAGGGTCCCTGGTGGCAT
GGGCATCGGCGAGACACGCGAGGTGGCTTGGACGGCTCCTGCGCCCATGA back to topprotein sequence of NO10G03560.1 >NO10G03560.1-protein ID=NO10G03560.1-protein|Name=NO10G03560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1076bp
MNEAGPQEESRRRRRRVLLGSLGAVCLIVGAALAITFAGKGQGKNKPEPA
ATVEGNLSPMGDLPGLVKDSVLSTNAGTTGAAPKSVGTTVTPAVPTASKA
APAEGTGDLTFQNFLETGTVGGVGLGAALGALPGASTVNGAFNGLASNLA
NLAGLRVCSPVDGPDLERMVAGSSTCGVILLTKGSMVPYFTENTMVVSTR
KIIVGHPIDLPQIRTVGKLERVFDVVSGGSLDIRFVSVFKAYGRAPSEDL
RIVAGGVALVRLGGFFRGTAVIFREPTQTFKAFQGALERPYQRRRKYGGH
VLVLGGSFFCYGCQIIRWNPYGGILLNVFQLGRDFLVVAGTSVMTGVYHL
AFTPFGSAVSVGNAIAVLGGVSVRIGGGTEGVAILKGQFGAGQNIFVGGG
VLVNVGHQQQTAFVCLVRAGYGMTAMGAGVFVLIAELENRAWGVASIFGA
GQVYSNGAGVMDKTGGEVVNSAISAFQALAGGSAYLGAGDMNIVGEQFAR
LALTLDQNGVGMTFFNGAGHGTMIYVPSLVICLVRSQKILGAEVFQGAGF
HTEVNNTRWTIQLVNAQMPGYEGWIGLGASLMIRSRTTVRRLVNYRAAKK
VAWVVNGVGVNESLRSNFNIFTDKNGTTVLKPHAKNGKHRLLEAVDELVS
SAASTSNRRALIKGFSRPALSMADSVMDSKKVQPPNPGILAEKLQALVSG
LKNKRRLKGQAAVNPTRIMNMFQGLSPASLMKAWQEAVDETNNNNALGSN
TNDRALAAGNDADEVDADGRWGEQVPRHHGEAQRSLAGWGRLSIVARGEG
WAKTVGSKYTARLLQDIDDHQAENPGADIKLPDTNILTYDIFLYCPVADA
ECEYSQANMKAAFQDYLDDVAQEETAFKISSATAAVHPAISKIVNDADGD
FVSAIGAPALEGCGKGLSFSLFVTAPDKSSVTDVKTILEKAGTDSDELLA
FINDQGEQEASFCSVSVTKRSAMFFPSVDTAAGKSFYQKLYTGNALDSGS
LWPDITVVSAHEVAPVQHAVADQSYTLLLEGFAMKAEVVVELFQGTQSSG
WRWPGSLVAWASARHARWLGRLLRP* back to top
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