NO10G03130, NO10G03130 (gene) Nannochloropsis oceanica

Overview
NameNO10G03130
Unique NameNO10G03130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3742
Alignment locationchr10:876171..879912 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein kinase wee1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:876171..879912 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO:0016310phosphorylation
GO:0006468protein phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0016301kinase activity
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
Homology
[Close]
BLAST of NO10G03130 vs. NCBI_GenBank
Match: ETI47354.1 (WEE protein kinase [Phytophthora parasitica P1569] >ETM47102.1 WEE protein kinase [Phytophthora parasitica])

HSP 1 Score: 168.7 bits (426), Expect = 8.000e-38
Identity = 108/303 (35.64%), Postives = 158/303 (52.15%), Query Frame = 0 
Query:  452 ISRYLMEFEQLEMIGAGRFSMVHRVKKRLDGWVYAIKRSRHSLETEGEKEGALREVWALAALQGCPQLVRYMGAWMEEKRLYILTEFCRGGSVEREIFGDGEGREGGKGEEWLLRMVRDVGLALEFMHERGIVHMDVKPGNILIVGEGGAEGGREGGFKLADLGHAIKADGSMPVAEGDERYLSMDILKGLDLFKLSAGMDVPPYRDILRPNDIFGLGASLYECASRVPLAGGGAEFLALREGRLVHMPVVELEVEKGERGVGGRRKVKVYSDGFETLLRGMVAVEGRERPTAAVVVKRSMEL 755
            +S+YL +F +L +IG+G FS V++  K++DGWVYA+K+S+     + + E ALREV ALAAL     +VRY  AW+E+  LYI  E   G S+   +    +       EE L +++  +  AL  MH + +VHMDVK  N+L VG G         +KL DLG     DGSM + EGD RYLS ++L+G               R+ LR  DIF LGA++YE A    LA GG E+  +R+G LV                      + YS+  + L+  M+  +  +RP A  +++  + L
Sbjct:  305 VSKYLSDFSELGLIGSGSFSKVYKCIKKIDGWVYAVKKSKRHFRGKADTERALREVQALAALSSSNHVVRYFDAWIEDDLLYIQLENLEGCSLAGFV---NKYAPHKVPEETLCKLLCHLAQALYDMHSKKMVHMDVKLQNVL-VGPGEV-------YKLGDLGTVAHLDGSMEITEGDNRYLSRELLEG--------------NRNNLRAGDIFALGATIYELALGTTLASGGEEWQKIRDGDLV--------------------MFRQYSNSLQHLIASMMHPDALQRPLAEDILQHEVVL 562
[Close]
BLAST of NO10G03130 vs. NCBI_GenBank
Match: ETK87309.1 (WEE protein kinase [Phytophthora parasitica] >ETO76089.1 WEE protein kinase [Phytophthora parasitica P1976] >ETP17166.1 WEE protein kinase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 168.7 bits (426), Expect = 8.000e-38
Identity = 108/303 (35.64%), Postives = 158/303 (52.15%), Query Frame = 0 
Query:  452 ISRYLMEFEQLEMIGAGRFSMVHRVKKRLDGWVYAIKRSRHSLETEGEKEGALREVWALAALQGCPQLVRYMGAWMEEKRLYILTEFCRGGSVEREIFGDGEGREGGKGEEWLLRMVRDVGLALEFMHERGIVHMDVKPGNILIVGEGGAEGGREGGFKLADLGHAIKADGSMPVAEGDERYLSMDILKGLDLFKLSAGMDVPPYRDILRPNDIFGLGASLYECASRVPLAGGGAEFLALREGRLVHMPVVELEVEKGERGVGGRRKVKVYSDGFETLLRGMVAVEGRERPTAAVVVKRSMEL 755
            +S+YL +F +L +IG+G FS V++  K++DGWVYA+K+S+     + + E ALREV ALAAL     +VRY  AW+E+  LYI  E   G S+   +    +       EE L +++  +  AL  MH + +VHMDVK  N+L VG G         +KL DLG     DGSM + EGD RYLS ++L+G               R+ LR  DIF LGA++YE A    LA GG E+  +R+G LV                      + YS+  + L+  M+  +  +RP A  +++  + L
Sbjct:  305 VSKYLSDFSELGLIGSGSFSKVYKCIKKIDGWVYAVKKSKRHFRGKADTERALREVQALAALSSSNHVVRYFDAWIEDDLLYIQLENLEGCSLAGFV---NKYAPHKVPEETLCKLLCHLAQALYDMHSKKMVHMDVKLQNVL-VGPGEV-------YKLGDLGTVAHLDGSMEITEGDNRYLSRELLEG--------------NRNNLRAGDIFALGATIYELALGTTLASGGEEWQKIRDGDLV--------------------MFRQYSNSLQHLIASMMHPDALQRPLAEDILQHEVVL 562
[Close]
BLAST of NO10G03130 vs. NCBI_GenBank
Match: ETL40723.1 (WEE protein kinase [Phytophthora parasitica])

HSP 1 Score: 168.7 bits (426), Expect = 8.000e-38
Identity = 108/303 (35.64%), Postives = 158/303 (52.15%), Query Frame = 0 
Query:  452 ISRYLMEFEQLEMIGAGRFSMVHRVKKRLDGWVYAIKRSRHSLETEGEKEGALREVWALAALQGCPQLVRYMGAWMEEKRLYILTEFCRGGSVEREIFGDGEGREGGKGEEWLLRMVRDVGLALEFMHERGIVHMDVKPGNILIVGEGGAEGGREGGFKLADLGHAIKADGSMPVAEGDERYLSMDILKGLDLFKLSAGMDVPPYRDILRPNDIFGLGASLYECASRVPLAGGGAEFLALREGRLVHMPVVELEVEKGERGVGGRRKVKVYSDGFETLLRGMVAVEGRERPTAAVVVKRSMEL 755
            +S+YL +F +L +IG+G FS V++  K++DGWVYA+K+S+     + + E ALREV ALAAL     +VRY  AW+E+  LYI  E   G S+   +    +       EE L +++  +  AL  MH + +VHMDVK  N+L VG G         +KL DLG     DGSM + EGD RYLS ++L+G               R+ LR  DIF LGA++YE A    LA GG E+  +R+G LV                      + YS+  + L+  M+  +  +RP A  +++  + L
Sbjct:  305 VSKYLSDFSELGLIGSGSFSKVYKCIKKIDGWVYAVKKSKRHFRGKADTERALREVQALAALSSSNHVVRYFDAWIEDDLLYIQLENLEGCSLAGFV---NKYAPHKVPEETLCKLLCHLAQALYDMHSKKMVHMDVKLQNVL-VGPGEV-------YKLGDLGTVAHLDGSMEITEGDNRYLSRELLEG--------------NRNNLRAGDIFALGATIYELALGTTLASGGEEWQKIRDGDLV--------------------MFRQYSNSLQHLIASMMHPDALQRPLAEDILQHEVVL 562
[Close]
BLAST of NO10G03130 vs. NCBI_GenBank
Match: XP_008905209.1 (WEE protein kinase [Phytophthora parasitica INRA-310] >ETL93886.1 WEE protein kinase [Phytophthora parasitica] >ETN09376.1 WEE protein kinase [Phytophthora parasitica INRA-310])

HSP 1 Score: 168.7 bits (426), Expect = 8.000e-38
Identity = 108/303 (35.64%), Postives = 158/303 (52.15%), Query Frame = 0 
Query:  452 ISRYLMEFEQLEMIGAGRFSMVHRVKKRLDGWVYAIKRSRHSLETEGEKEGALREVWALAALQGCPQLVRYMGAWMEEKRLYILTEFCRGGSVEREIFGDGEGREGGKGEEWLLRMVRDVGLALEFMHERGIVHMDVKPGNILIVGEGGAEGGREGGFKLADLGHAIKADGSMPVAEGDERYLSMDILKGLDLFKLSAGMDVPPYRDILRPNDIFGLGASLYECASRVPLAGGGAEFLALREGRLVHMPVVELEVEKGERGVGGRRKVKVYSDGFETLLRGMVAVEGRERPTAAVVVKRSMEL 755
            +S+YL +F +L +IG+G FS V++  K++DGWVYA+K+S+     + + E ALREV ALAAL     +VRY  AW+E+  LYI  E   G S+   +    +       EE L +++  +  AL  MH + +VHMDVK  N+L VG G         +KL DLG     DGSM + EGD RYLS ++L+G               R+ LR  DIF LGA++YE A    LA GG E+  +R+G LV                      + YS+  + L+  M+  +  +RP A  +++  + L
Sbjct:  305 VSKYLSDFSELGLIGSGSFSKVYKCIKKIDGWVYAVKKSKRHFRGKADTERALREVQALAALSSSNHVVRYFDAWIEDDLLYIQLENLEGCSLAGFV---NKYAPHKVPEETLCKLLCHLAQALYDMHSKKMVHMDVKLQNVL-VGPGEV-------YKLGDLGTVAHLDGSMEITEGDNRYLSRELLEG--------------NRNNLRAGDIFALGATIYELALGTTLASGGEEWQKIRDGDLV--------------------MFRQYSNSLQHLIASMMHPDALQRPLAEDILQHEVVL 562
[Close]
BLAST of NO10G03130 vs. NCBI_GenBank
Match: KUF84823.1 (Wee1 protein kinase [Phytophthora nicotianae] >KUF93957.1 Wee1 protein kinase [Phytophthora nicotianae])

HSP 1 Score: 168.7 bits (426), Expect = 8.000e-38
Identity = 108/303 (35.64%), Postives = 158/303 (52.15%), Query Frame = 0 
Query:  452 ISRYLMEFEQLEMIGAGRFSMVHRVKKRLDGWVYAIKRSRHSLETEGEKEGALREVWALAALQGCPQLVRYMGAWMEEKRLYILTEFCRGGSVEREIFGDGEGREGGKGEEWLLRMVRDVGLALEFMHERGIVHMDVKPGNILIVGEGGAEGGREGGFKLADLGHAIKADGSMPVAEGDERYLSMDILKGLDLFKLSAGMDVPPYRDILRPNDIFGLGASLYECASRVPLAGGGAEFLALREGRLVHMPVVELEVEKGERGVGGRRKVKVYSDGFETLLRGMVAVEGRERPTAAVVVKRSMEL 755
            +S+YL +F +L +IG+G FS V++  K++DGWVYA+K+S+     + + E ALREV ALAAL     +VRY  AW+E+  LYI  E   G S+   +    +       EE L +++  +  AL  MH + +VHMDVK  N+L VG G         +KL DLG     DGSM + EGD RYLS ++L+G               R+ LR  DIF LGA++YE A    LA GG E+  +R+G LV                      + YS+  + L+  M+  +  +RP A  +++  + L
Sbjct:  305 VSKYLSDFSELGLIGSGSFSKVYKCIKKIDGWVYAVKKSKRHFRGKADTERALREVQALAALSSSNHVVRYFDAWIEDDLLYIQLENLEGCSLAGFV---NKYAPHKVPEETLCKLLCHLAQALYDMHSKKMVHMDVKLQNVL-VGPGEV-------YKLGDLGTVAHLDGSMEITEGDNRYLSRELLEG--------------NRNNLRAGDIFALGATIYELALGTTLASGGEEWQKIRDGDLV--------------------MFRQYSNSLQHLIASMMHPDALQRPLAEDILQHEVVL 562
[Close]
BLAST of NO10G03130 vs. NCBI_GenBank
Match: XP_006479906.1 (PREDICTED: wee1-like protein kinase [Citrus sinensis] >KDO87325.1 hypothetical protein CISIN_1g011331mg [Citrus sinensis])

HSP 1 Score: 168.3 bits (425), Expect = 1.000e-37
Identity = 104/301 (34.55%), Postives = 153/301 (50.83%), Query Frame = 0 
Query:  452 ISRYLMEFEQLEMIGAGRFSMVHRVKKRLDGWVYAIKRSRHSLETEGEKEGALREVWALAALQGCPQLVRYMGAWMEEKRLYILTEFCRGGSVER---EIFGDGEGREGGKGEEWLLRMVRDVGLALEFMHERGIVHMDVKPGNILIVGEGGAEGGREGGFKLADLGHAIKADGSMPVAEGDERYLSMDILKGLDLFKLSAGMDVPPYRDILRPNDIFGLGASLYECASRVPLAGGGAEFLALREGRLVHMPVVELEVEKGERGVGGRRKVKVYSDGFETLLRGMVAVEGRERPTAAVVVK 750
            +SRY  +F ++E IGAG FS V +V KR+DG  YA+K S+  L  + E+  AL EV ALAAL     +V Y  +W E ++LYI  E C     ++   + F +GE          +L+ +  +  AL+F+HE+GI H+DVKP NI +         + G +KL D G A   + S+P+ EGD RY+  +IL                  D L   DIF LGA++YE     PL+  G +FL LR+G+L  +P   L+                    F+ LL+ MV  +  +RP+A  +V+
Sbjct:  224 LSRYYTDFHEIEQIGAGNFSHVFKVLKRIDGCFYAVKHSKRQLHHDAERRKALLEVQALAALGSHENIVGYYSSWFENEQLYIQMELCDHSLSDKKASQFFAEGE----------VLKALHQIAQALQFIHEKGIAHLDVKPDNIYV---------KNGVYKLGDFGRATLLNKSLPIEEGDARYMPQEILN--------------EDYDHLDKVDIFSLGATMYELIKGSPLSESGPQFLNLRDGKLPLLPGHSLQ--------------------FQNLLKVMVDPDPVQRPSAKELVE 471
[Close]
BLAST of NO10G03130 vs. NCBI_GenBank
Match: XP_006444269.2 (wee1-like protein kinase [Citrus clementina])

HSP 1 Score: 168.3 bits (425), Expect = 1.000e-37
Identity = 104/301 (34.55%), Postives = 153/301 (50.83%), Query Frame = 0 
Query:  452 ISRYLMEFEQLEMIGAGRFSMVHRVKKRLDGWVYAIKRSRHSLETEGEKEGALREVWALAALQGCPQLVRYMGAWMEEKRLYILTEFCRGGSVER---EIFGDGEGREGGKGEEWLLRMVRDVGLALEFMHERGIVHMDVKPGNILIVGEGGAEGGREGGFKLADLGHAIKADGSMPVAEGDERYLSMDILKGLDLFKLSAGMDVPPYRDILRPNDIFGLGASLYECASRVPLAGGGAEFLALREGRLVHMPVVELEVEKGERGVGGRRKVKVYSDGFETLLRGMVAVEGRERPTAAVVVK 750
            +SRY  +F ++E IGAG FS V +V KR+DG  YA+K S+  L  + E+  AL EV ALAAL     +V Y  +W E ++LYI  E C     ++   + F +GE          +L+ +  +  AL+F+HE+GI H+DVKP NI +         + G +KL D G A   + S+P+ EGD RY+  +IL                  D L   DIF LGA++YE     PL+  G +FL LR+G+L  +P   L+                    F+ LL+ MV  +  +RP+A  +V+
Sbjct:  224 LSRYYTDFHEIEQIGAGNFSHVFKVLKRIDGCFYAVKHSKRQLHHDAERRKALLEVQALAALGSHENIVGYYSSWFENEQLYIQMELCDHSLSDKKASQFFAEGE----------VLKALHQIAQALQFIHEKGIAHLDVKPDNIYV---------KNGVYKLGDFGRATLLNKSLPIEEGDARYMPQEILN--------------EDYDHLDKVDIFSLGATMYELIKGSPLSESGPQFLNLRDGKLPLLPGHSLQ--------------------FQNLLKVMVDPDPVQRPSAKELVE 471
[Close]
BLAST of NO10G03130 vs. NCBI_GenBank
Match: ESR57509.1 (hypothetical protein CICLE_v10024323mg, partial [Citrus clementina])

HSP 1 Score: 167.5 bits (423), Expect = 1.800e-37
Identity = 103/296 (34.80%), Postives = 150/296 (50.68%), Query Frame = 0 
Query:  452 ISRYLMEFEQLEMIGAGRFSMVHRVKKRLDGWVYAIKRSRHSLETEGEKEGALREVWALAALQGCPQLVRYMGAWMEEKRLYILTEFCRGGSVER---EIFGDGEGREGGKGEEWLLRMVRDVGLALEFMHERGIVHMDVKPGNILIVGEGGAEGGREGGFKLADLGHAIKADGSMPVAEGDERYLSMDILKGLDLFKLSAGMDVPPYRDILRPNDIFGLGASLYECASRVPLAGGGAEFLALREGRLVHMPVVELEVEKGERGVGGRRKVKVYSDGFETLLRGMVAVEGRERPTA 745
            +SRY  +F ++E IGAG FS V +V KR+DG  YA+K S+  L  + E+  AL EV ALAAL     +V Y  +W E ++LYI  E C     ++   + F +GE          +L+ +  +  AL+F+HE+GI H+DVKP NI +         + G +KL D G A   + S+P+ EGD RY+  +IL                  D L   DIF LGA++YE     PL+  G +FL LR+G+L  +P   L+                    F+ LL+ MV  +  +RP+A
Sbjct:  207 LSRYYTDFHEIEQIGAGNFSHVFKVLKRIDGCFYAVKHSKRQLHHDAERRKALLEVQALAALGSHENIVGYYSSWFENEQLYIQMELCDHSLSDKKASQFFAEGE----------VLKALHQIAQALQFIHEKGIAHLDVKPDNIYV---------KNGVYKLGDFGRATLLNKSLPIEEGDARYMPQEILN--------------EDYDHLDKVDIFSLGATMYELIKGSPLSESGPQFLNLRDGKLPLLPGHSLQ--------------------FQNLLKVMVDPDPVQRPSA 449
[Close]
BLAST of NO10G03130 vs. NCBI_GenBank
Match: ETP45200.1 (WEE protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 167.5 bits (423), Expect = 1.800e-37
Identity = 107/303 (35.31%), Postives = 158/303 (52.15%), Query Frame = 0 
Query:  452 ISRYLMEFEQLEMIGAGRFSMVHRVKKRLDGWVYAIKRSRHSLETEGEKEGALREVWALAALQGCPQLVRYMGAWMEEKRLYILTEFCRGGSVEREIFGDGEGREGGKGEEWLLRMVRDVGLALEFMHERGIVHMDVKPGNILIVGEGGAEGGREGGFKLADLGHAIKADGSMPVAEGDERYLSMDILKGLDLFKLSAGMDVPPYRDILRPNDIFGLGASLYECASRVPLAGGGAEFLALREGRLVHMPVVELEVEKGERGVGGRRKVKVYSDGFETLLRGMVAVEGRERPTAAVVVKRSMEL 755
            +S+YL +F +L +IG+G FS V++  K++DGWVYA+K+S+     + + E ALREV ALAAL     +VRY  AW+E+  LYI  E   G S+   +    +       EE L +++  +  AL  MH + +VHMDVK  N+L VG G         +KL DLG     DGSM + EGD RYLS ++L+G               R+ LR  DIF LGA++YE A    LA GG ++  +R+G LV                      + YS+  + L+  M+  +  +RP A  +++  + L
Sbjct:  305 VSKYLSDFSELGLIGSGSFSKVYKCIKKIDGWVYAVKKSKRHFRGKADTERALREVQALAALSSSNHVVRYFDAWIEDDLLYIQLENLEGCSLAGFV---NKYAPHKVPEETLCKLLCHLAQALYDMHSKKMVHMDVKLQNVL-VGPGEV-------YKLGDLGTVAHLDGSMEITEGDNRYLSRELLEG--------------NRNNLRAGDIFALGATIYELALGTTLASGGEDWQKIRDGDLV--------------------MFRQYSNSLQHLIASMMHPDALQRPLAEDILQHEVVL 562
[Close]
BLAST of NO10G03130 vs. NCBI_GenBank
Match: GAU11197.1 (hypothetical protein TSUD_341870 [Trifolium subterraneum])

HSP 1 Score: 167.5 bits (423), Expect = 1.800e-37
Identity = 108/301 (35.88%), Postives = 152/301 (50.50%), Query Frame = 0 
Query:  452 ISRYLMEFEQLEMIGAGRFSMVHRVKKRLDGWVYAIKRSRHSLETEGEKEGALREVWALAALQGCPQLVRYMGAWMEEKRLYILTEFC-RGGSVER--EIFGDGEGREGGKGEEWLLRMVRDVGLALEFMHERGIVHMDVKPGNILIVGEGGAEGGREGGFKLADLGHAIKADGSMPVAEGDERYLSMDILKGLDLFKLSAGMDVPPYRDILRPNDIFGLGASLYECASRVPLAGGGAEFLALREGRLVHMPVVELEVEKGERGVGGRRKVKVYSDGFETLLRGMVAVEGRERPTAAVVVK 750
            +SRY  +F ++E IG G FS V +V KR+DG +YA+KRS   L+ E E+  AL EV ALAAL     +V Y  +W+E ++LYI  E C    SV++  E   +G+          +L  +  V  AL FMHE+GI H+DVKP NI +         + G +KL D G A   D S+P+ EGD RY+  +IL                  D L   DIF LG S+YE   + PL   G  FL L+EG+L  +P   L+                    F+ LL+ M+  +  +RP+A  +V+
Sbjct:  226 LSRYRTDFHEIEQIGRGNFSCVFKVLKRIDGCLYAVKRSTRQLQLETERRKALMEVQALAALGSHENIVGYYTSWLENEQLYIQMEICDHSLSVKKGYEFLAEGQ----------VLEALYQVANALRFMHEKGIAHLDVKPDNIYV---------KNGVYKLGDFGCATLIDSSLPIDEGDARYMPHEILN--------------ENYDHLDKVDIFSLGVSIYELIRKSPLPESGGHFLNLKEGKLPLLPGHSLQ--------------------FQNLLKAMIDPDPVKRPSARELVE 473
The following BLAST results are available for this feature:
BLAST of NO10G03130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETI47354.18.000e-3835.64WEE protein kinase [Phytophthora parasitica P1569]... [more]
ETK87309.18.000e-3835.64WEE protein kinase [Phytophthora parasitica] >ETO7... [more]
ETL40723.18.000e-3835.64WEE protein kinase [Phytophthora parasitica][more]
XP_008905209.18.000e-3835.64WEE protein kinase [Phytophthora parasitica INRA-3... [more]
KUF84823.18.000e-3835.64Wee1 protein kinase [Phytophthora nicotianae] >KUF... [more]
XP_006479906.11.000e-3734.55PREDICTED: wee1-like protein kinase [Citrus sinens... [more]
XP_006444269.21.000e-3734.55wee1-like protein kinase [Citrus clementina][more]
ESR57509.11.800e-3734.80hypothetical protein CICLE_v10024323mg, partial [C... [more]
ETP45200.11.800e-3735.31WEE protein kinase [Phytophthora parasitica P10297... [more]
GAU11197.11.800e-3735.88hypothetical protein TSUD_341870 [Trifolium subter... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001187NSK001187Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03130.1NO10G03130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|565129gene_3886Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03130.1NO10G03130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03130 ID=NO10G03130|Name=NO10G03130|organism=Nannochloropsis oceanica|type=gene|length=3742bp
GAGAGATATGAACGATAACTGATGAACTCGCCAGGCCTTGGACCTGGACG
ACATGAGACGAGCCGATACGTGTCTGTTTCTTAAGTGATTCCTGTTCCCA
CGAGCTTGCTTAGGGTCCATATGGTGCGAGGGATAATTCTTAAGGTCTCG
AGTCTACGTGACCTTTCCCCCTCTGATCTTGCAGAGAGAATTTCCCTTTC
CAACACTTGACCACCTCAATTTACACAAACAATGCCAAAATTTCCCGTAA
AGCTTTGAGGGGTAATATTGCAAAGTCTTCGTTTGCTGCTCAATTTCCTG
GAAGGCAAGCATGGCACCAAGGTAgttgtttggttgtcgtgcttcatcat
aacgctgcggacacgaggccacatcctctttacgctcctcacgtcctcct
ccccgtgcaccgcaccacaccaccttcacacacagGTCAGGCCCACCCAT
ATCCGCCATGTACTCCCAAGCCAGCCAGTACTCGCAAGAGGACTACCTGA
CCCCGGCCACTCAGGATAATGCCGCCGCTGGCTCTTCTTTTCTGCCCTCC
CACTTCGCCTTGGCCTCCCCCTCGCCCATCAAGAAGAAATCGCGCTCCAG
CCGCCGGGGCAGCAATGGGGCCACCGCACGCCAGCATGCCATGATGATGT
CGGTTTTGCCAGAAGGCGCGGCGCTGCATGATGGTGGGCACCTCCAGAAC
AACCACCAGCAGGGCATTCCTCAGTTGTCCCCGTCCTCATCAAAAATGAT
GATGATGAGCGGGATGAAGATTGCCGGGGGAGGAGGAAGAGGAGAAGAAG
CCAATCCCAACCCTCCGGAAGTGTACAAAATGGGCATGCACAAACCTTTG
CAGCAACAACAGCAACAGCAGCAACAGAACCAGCAGCACTCCCGGCGACA
TCACAACCGACCACCCTCCTCCTCATCATCATCGTCCTCCTCCTCCTTTG
CTGCTGCCGGTGCTGCTGCCGATGCTGCTGCTGCTGTCTCTCCTTCATTT
CTTGGAGCCGTAGTAAGAGACCCTTCCTCTACTTTCATGTCCACAGGCTC
CACAGCCTCTTCCTCCTCTTCCTCCTCCTCCTCCTCACCGCCCGTCACCT
CCACCTCCTTCCTCCCTCCACCTCCCCAACACTATGATGGGTTCGACGAC
GGGGACTTCCGAAATTTACACAGCCAACCCGGAGAGGGAGGAAGGAGGGG
AGGAGGGCTAAGTCAATCGGTGGTGGAGTGCTTTGGGTCGTTAAGAATGA
ATGAAAAACCGTCGCCCGCTGACATGAGGAGGGAGGAGGGGAGAGAGGAA
GATGAGGTGGGAGGGGACGGTTGGGAGGAAGGGAGGGAGGAAGGGAGGGA
GGAAGGGATGGAGGCGATGCAGTGTTCTCAGGATTTGGCTCAAGGGTTTA
GATTGAAGTCAGTGGGCGCGAACTGGGGCGAGGAAGAGGAGGAAGAGGAG
GAGCAGGGAGGACTGAAGGAACGGCAGCGTAGTGTGCTAGCAGCAGGAGC
AGCAGAGGGAGGAAGAGGAATAAGGGGAGGGGTGGTACGACAGCGGCCGG
CGGTGTGGAATGGAGAAGGAGGAGGGGGAGGAAGCGAGGGAGGAGAGGGG
GGTGAGTACATCCAAGTTGTTTCCATCCCTCCCTGTAATTTCAACCCCTT
TTCCTCGACATCTTCCTCCAATAGCGATGCCCCTGAAGGACGCAAAAGGC
ATCGACAACGGAAAATCAAAATTCCTTGTACCCGGGGATGGATGGAGGAG
GGAGGGATGGAGGGAGGGCGGGAAGGCGGGCGGGCGGGAGGGAGGGAGGG
AGGGATGTTGATTTCGAGGTATTTGATGGAATTTGAGCAGCTCGAAATGA
TCGGAGCGGGGAGATTTTCAATGGTGCACCGAGTCAAGAAGAGACTGGAC
GGATGGGTGTATGCGATTAAACGGTCGCGGCATTCGTTGGAAACGGAGGG
AGAGAAGGAGGGGGCCTTGAGGGAGGTGTGGGCCTTGGCGGCTCTGCAGG
GATGTCCGCAGTTGGTGCGGTATATGGGGGCGTGGATGGAGGAGAAAAGG
TTGTATATTCTAACGGAATTTTGCCGGGGGGGATCGGTGGAGAGAGAGAT
TTTTGGGGATGGGGAAGGGAGGGAGGGTGGGAAGGGGGAGGAGTGGTTGT
TGAGGATGGTGCGGGATGTGGGCCTGGCGTTGGAGTTCATGCACGAGAGG
GGCATTGTGCACATGGACGTGAAGCCGGGAAACATTTTGATCGTGGGGGA
GGGCGGGGCCGAAGGCGGGAGGGAGGGAGGATTTAAGTTAGCGGATTTGG
GCCATGCGATCAAGGCGGATGGAAGTATGCCAGTGGCGGAGGGGGATGAG
AGgtaggttcactgtttgattgtccacttacttgttattcatacattcct
actgtttatttctattcatgtacgtatgtatctatttgtttacaaccgcc
tcttttcccaaccctccctccctccctccctccctccctccctccctccc
tccctccccagGTATCTGTCGATGGACATCCTGAAAGGGCTGGACTTGTT
CAAGCTCTCAGCGGGCATGGACGTGCCTCCCTACCGAGATATTCTAAGGC
CCAACGATATTTTTGGCTTGGGCGCCTCGTTGTATGAGTGTGCTTCTCGT
GTACCTCTTGCGGGAGGGGGGGCTGAATTCTTGGCGTTGAGGGAGGGGAG
GTTGGTCCACATGCCGGTGGTGGAGTTGGAGGTGGAGAAGGGAGAGAGGG
GAGTGGGGGGGAGGAGGAAAGTGAAGGTGTATTCTGACGGGTTCGAGACA
TTGTTGAGGGGGATGGTGGCGGTGGAGGGGAGAGAGAGGCCGACTGCAGC
GGTGGTGGTGAAAAGATCGATGGAATTGCTCGGAGGAGAAGGGGGTGAAG
GGGGGAGGGAGGGAGAGAGGGGAATGAAGAGCGGTCATGGTGGTATAAGT
AACTCTGGAGGACTCCCAGCCTCACTGGCATCAGCACCAGCAGCAACAGC
AGCAGCAGCAGCGGTATCGGTGGCCGCAGCAGCAACAGCCCCAGAGCTTC
AACAGCAGCAGCAACACCATCATCATCAGCAGCAGCAGGAGCAGCCTTCA
TTTCCCTTGCCGACCACAACCTCCTCCTCCTCGTGCTGCAACCTTCCTCA
ATGCCAGGCCCAGCAGCAACGAATTTCCGCCTTAGAAGCCATGGTGCTAT
CTTTGACTGGGGATGGATGAGGGAGGGCGGGAGAGAGTGAGGGCGGTGAT
CATTTTAGATGCACTTAGATGGGCTTGTTGGCAATAGCAATAGTGCTTTT
GGAGGATGGTCATGACGACGAAGATGAGAAAAGGCAGCAGCAGCTGCTGC
AGCAGCAGCAGTAGTAGTAGCAGTAACAGCAGTATGAGCAGAAAAAGAGG
AGTATTAGATATTATAGAGCATATTGTGAAAGTAATTGGTCACGAAGGCA
AAAGAAAAGACGAAAATAAACAGGGATCAGAGGAGGGCGTACGGACGAGG
GATAGGAAAAGAAGAAAAAAAGCAAGAAGAGGTAGTAGGAGAGGAAGGAG
AGGGAAGAGGAGAAGAATGCGAAAGTGATGATGAAGAATGACAAGAAGAG
CGACAAAAAGAAAAGGAAGAAAAACGAGTCGGAAGCTGAAAAACTGTAAG
AGGAGAAAGGAAATGGAATAAAAGAAATAAAGAAATGGAGACAGTCTTAC
AGCTTCTACTCATCATCGCCCAAGGGGCATACCATAGACAAG
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protein sequence of NO10G03130.1

>NO10G03130.1-protein ID=NO10G03130.1-protein|Name=NO10G03130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=868bp
MYSQASQYSQEDYLTPATQDNAAAGSSFLPSHFALASPSPIKKKSRSSRR
GSNGATARQHAMMMSVLPEGAALHDGGHLQNNHQQGIPQLSPSSSKMMMM
SGMKIAGGGGRGEEANPNPPEVYKMGMHKPLQQQQQQQQQNQQHSRRHHN
RPPSSSSSSSSSSFAAAGAAADAAAAVSPSFLGAVVRDPSSTFMSTGSTA
SSSSSSSSSSPPVTSTSFLPPPPQHYDGFDDGDFRNLHSQPGEGGRRGGG
LSQSVVECFGSLRMNEKPSPADMRREEGREEDEVGGDGWEEGREEGREEG
MEAMQCSQDLAQGFRLKSVGANWGEEEEEEEEQGGLKERQRSVLAAGAAE
GGRGIRGGVVRQRPAVWNGEGGGGGSEGGEGGEYIQVVSIPPCNFNPFSS
TSSSNSDAPEGRKRHRQRKIKIPCTRGWMEEGGMEGGREGGRAGGREGGM
LISRYLMEFEQLEMIGAGRFSMVHRVKKRLDGWVYAIKRSRHSLETEGEK
EGALREVWALAALQGCPQLVRYMGAWMEEKRLYILTEFCRGGSVEREIFG
DGEGREGGKGEEWLLRMVRDVGLALEFMHERGIVHMDVKPGNILIVGEGG
AEGGREGGFKLADLGHAIKADGSMPVAEGDERYLSMDILKGLDLFKLSAG
MDVPPYRDILRPNDIFGLGASLYECASRVPLAGGGAEFLALREGRLVHMP
VVELEVEKGERGVGGRRKVKVYSDGFETLLRGMVAVEGRERPTAAVVVKR
SMELLGGEGGEGGREGERGMKSGHGGISNSGGLPASLASAPAATAAAAAV
SVAAAATAPELQQQQQHHHHQQQQEQPSFPLPTTTSSSSCCNLPQCQAQQ
QRISALEAMVLSLTGDG*
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Synonyms
Publications