NO10G02890, NO10G02890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G02890 vs. NCBI_GenBank
Match: XP_013665495.1 (DDT domain-containing protein PTM-like [Brassica napus]) HSP 1 Score: 97.8 bits (242), Expect = 4.900e-16 Identity = 73/246 (29.67%), Postives = 106/246 (43.09%), Query Frame = 0 Query: 390 LPSEFPCSPADCSLVWRALGCYTCLRTLSRFLAVSPFPALALLRGMCAPQRSMLLDEIHVQLLRVLARGYKGMGGM-NKLLTPKARCSSWAYLDRINWPVYFHFFLKAREEISWATWGDDAEVLAQAWDEEEEGKGWALSR-ELAAEEWQRTSVEVRVGILEWLCNRLMDLPEVGAVLGRRGLCYDTESVERARHPDGHMDTCAVCTLGGDLVLCDACPAVYHYGCVGEKLQGLP-ATWLCPECRF 633 LP P D + YT LR+ S L +SPF + + S+L D IHV LL++L + + + G ++ T R W LD +N+P+Y +L + + G G L+R E+ R + ++ IL LC +MD V + L +R S + + +G D C +C + G LV CD CPA YH C+G L LP W CPEC F Sbjct: 701 LPPSSPNLNLDGLPIPYVFATYTFLRSFSTVLFLSPFELKDFVEALRCTSPSLLFDSIHVSLLQILRKDLEKLAGEDDQSATLCLRSLDWDMLDVVNYPLYVVEYL--------------------LFSGSKHGPGVDLARFNFFRNEYFRLPMTLKTEILTCLCGDMMDAEVVISELNKR-------SADGSSDRNGGED-CFICKMDGKLVCCDGCPAAYHSKCIGVALDLLPEGAWYCPECSF 918
BLAST of NO10G02890 vs. NCBI_GenBank
Match: KYP68059.1 (Nucleosome-remodeling factor subunit NURF301 family [Cajanus cajan]) HSP 1 Score: 97.8 bits (242), Expect = 4.900e-16 Identity = 67/263 (25.48%), Postives = 111/263 (42.21%), Query Frame = 0 Query: 411 YTCLRTLSRFLAVSPFPALALLRGMCAPQRSMLLDEIHVQLLRVLARGYKGMGGMN-KLLTPKARCSSWAYLDRINWPVYFHFFLKAREEISWATWGDDAEVLAQAWDEEEEGKGWALSRELAAEEWQRTSVEVRVGILEWLCNRLMDLPEVGAVLGRR------------------------------GLCYDTESVERARHPDGHMDTCAVCTLGGDLVLCDACPAVYHYGCVGEKLQGLP-ATWLCPECRFPDPAYFAAR 642 Y CLR+ S FL +SPF L+ + + S+L D IHV +L+ L + + + + + R +W +LD + WP++ +L G + G+ L + ++ + V V+V IL++LC+ +++ + + L RR G C E+V+ D + D C +C + G L+ CD CPA +H CVG LP W CPEC + A+ +R Sbjct: 397 YACLRSFSTFLFLSPFELEDLVAALKSEIPSILFDSIHVSILQTLRKHLEFLSNEGCQSASSCLRNLNWDFLDLVTWPIFMAEYLLIH--------GSGFKT------------GFDLKHLMLRTDYYKQPVIVKVEILQYLCDDMIESEAIRSELNRRSLVTEADIGFDQNMYFDTCKKRKAVMDVSGGSCLTEENVDNP--TDWNSDECCLCKMDGSLICCDGCPAAFHSRCVGIVSDSLPEGDWYCPECGGKNRAWMKSR 637
BLAST of NO10G02890 vs. NCBI_GenBank
Match: XP_017604294.1 (PREDICTED: DDT domain-containing protein PTM-like isoform X1 [Gossypium arboreum]) HSP 1 Score: 97.8 bits (242), Expect = 4.900e-16 Identity = 70/251 (27.89%), Postives = 106/251 (42.23%), Query Frame = 0 Query: 411 YTCLRTLSRFLAVSPFPALALLRGMCAPQRSMLLDEIHVQLLRVLARG--YKGMGGMNKLLTPKARCSSWAYLDRINWPVYFHFFLKAREEISWATWGDDAEVLAQAWDEEEEGKGWALSRELAAEEWQRTSVEVRVGILEWLCNRLMDLPEVGAVLGRRGLCYDTE-SVERARH---------------------------PDGHMDTCAVCTLGGDLVLCDACPAVYHYGCVGEKLQGLP-ATWLCPEC 631 Y CLR+ S L +SPF + + S L D IHV +L+ L + Y G ++ + R +W +LD I WP++ +L SW +G D S +L ++ + V+V IL LC+ ++++ V + L RR L +T+ +R R+ D + D C +C + G+L+ CD CPA YH CVG LP W CPEC Sbjct: 450 YACLRSFSTLLFLSPFELEDFVTALKCQSPSSLFDCIHVSILQTLKKHLVYLSSEG-SESASECLRSLNWGFLDSITWPIFMVEYLLIHG--SWLDYGFD-----------------LTSLKLFRCDYYKQPASVKVEILRCLCDDMIEVEAVRSELNRRSLASETDMDFDRNRNNGVCKKRKATKDLSGGSSFIEEIVDDTTDWNSDDCCLCKMDGNLICCDGCPAAYHSKCVGVVNAHLPEGDWYCPEC 680
BLAST of NO10G02890 vs. NCBI_GenBank
Match: XP_017604300.1 (PREDICTED: DDT domain-containing protein PTM-like isoform X2 [Gossypium arboreum]) HSP 1 Score: 97.8 bits (242), Expect = 4.900e-16 Identity = 70/251 (27.89%), Postives = 106/251 (42.23%), Query Frame = 0 Query: 411 YTCLRTLSRFLAVSPFPALALLRGMCAPQRSMLLDEIHVQLLRVLARG--YKGMGGMNKLLTPKARCSSWAYLDRINWPVYFHFFLKAREEISWATWGDDAEVLAQAWDEEEEGKGWALSRELAAEEWQRTSVEVRVGILEWLCNRLMDLPEVGAVLGRRGLCYDTE-SVERARH---------------------------PDGHMDTCAVCTLGGDLVLCDACPAVYHYGCVGEKLQGLP-ATWLCPEC 631 Y CLR+ S L +SPF + + S L D IHV +L+ L + Y G ++ + R +W +LD I WP++ +L SW +G D S +L ++ + V+V IL LC+ ++++ V + L RR L +T+ +R R+ D + D C +C + G+L+ CD CPA YH CVG LP W CPEC Sbjct: 450 YACLRSFSTLLFLSPFELEDFVTALKCQSPSSLFDCIHVSILQTLKKHLVYLSSEG-SESASECLRSLNWGFLDSITWPIFMVEYLLIHG--SWLDYGFD-----------------LTSLKLFRCDYYKQPASVKVEILRCLCDDMIEVEAVRSELNRRSLASETDMDFDRNRNNGVCKKRKATKDLSGGSSFIEEIVDDTTDWNSDDCCLCKMDGNLICCDGCPAAYHSKCVGVVNAHLPEGDWYCPEC 680
BLAST of NO10G02890 vs. NCBI_GenBank
Match: XP_020215306.1 (DDT domain-containing protein PTM [Cajanus cajan]) HSP 1 Score: 97.8 bits (242), Expect = 4.900e-16 Identity = 67/263 (25.48%), Postives = 111/263 (42.21%), Query Frame = 0 Query: 411 YTCLRTLSRFLAVSPFPALALLRGMCAPQRSMLLDEIHVQLLRVLARGYKGMGGMN-KLLTPKARCSSWAYLDRINWPVYFHFFLKAREEISWATWGDDAEVLAQAWDEEEEGKGWALSRELAAEEWQRTSVEVRVGILEWLCNRLMDLPEVGAVLGRR------------------------------GLCYDTESVERARHPDGHMDTCAVCTLGGDLVLCDACPAVYHYGCVGEKLQGLP-ATWLCPECRFPDPAYFAAR 642 Y CLR+ S FL +SPF L+ + + S+L D IHV +L+ L + + + + + R +W +LD + WP++ +L G + G+ L + ++ + V V+V IL++LC+ +++ + + L RR G C E+V+ D + D C +C + G L+ CD CPA +H CVG LP W CPEC + A+ +R Sbjct: 491 YACLRSFSTFLFLSPFELEDLVAALKSEIPSILFDSIHVSILQTLRKHLEFLSNEGCQSASSCLRNLNWDFLDLVTWPIFMAEYLLIH--------GSGFKT------------GFDLKHLMLRTDYYKQPVIVKVEILQYLCDDMIESEAIRSELNRRSLVTEADIGFDQNMYFDTCKKRKAVMDVSGGSCLTEENVDNP--TDWNSDECCLCKMDGSLICCDGCPAAFHSRCVGIVSDSLPEGDWYCPECGGKNRAWMKSR 731
BLAST of NO10G02890 vs. NCBI_GenBank
Match: PON97672.1 (Autoimmune regulator [Trema orientalis]) HSP 1 Score: 97.8 bits (242), Expect = 4.900e-16 Identity = 70/253 (27.67%), Postives = 108/253 (42.69%), Query Frame = 0 Query: 411 YTCLRTLSRFLAVSPFPALALLRGMCAPQRSMLLDEIHVQLLRVLARGYKGMGGMN-KLLTPKARCSSWAYLDRINWPVYF-HFFLKAREEISWATWGDDAEVLAQAWDEEEEGKGWALSRELAAEEWQRTSVEVRVGILEWLCNRLMDLPEVGAVLGRR------------------------------GLCYDTESVERARHPDGHMDTCAVCTLGGDLVLCDACPAVYHYGCVGEKLQGLP-ATWLCPEC 631 Y CLR+ S L +SPF + M S L D +HV +L+ L + + + + + R +W +LD I WP++ +FL +G L ++D S +L ++ + V+++V IL LC+ L+++ + + L RR G C D E V+ H D + D C +C + G+L+ CD CPA YH CVG LP W CPEC Sbjct: 497 YACLRSFSTLLFLSPFELEEFVAAMECKSPSSLFDNVHVSILQTLRKHLEFLSSEGFESASNCLRSLNWDFLDLITWPIFMVEYFL---------IYGSG---LKPSFD--------LSSLKLFKADYYQQPVKIKVEILRCLCDDLIEVEAIRSELNRRSLAAEPDMVFERNSNFEGSKKRRVAPGISSGYCLDDEVVD--DHVDWNYDECCLCKMDGNLICCDGCPAAYHSRCVGIASDHLPEGDWYCPEC 727
BLAST of NO10G02890 vs. NCBI_GenBank
Match: XP_013612581.1 (PREDICTED: uncharacterized protein LOC106318951 [Brassica oleracea var. oleracea]) HSP 1 Score: 97.4 bits (241), Expect = 6.400e-16 Identity = 71/246 (28.86%), Postives = 107/246 (43.50%), Query Frame = 0 Query: 390 LPSEFPCSPADCSLVWRALGCYTCLRTLSRFLAVSPFPALALLRGMCAPQRSMLLDEIHVQLLRVLARGYKGMGGM-NKLLTPKARCSSWAYLDRINWPVYFHFFLKAREEISWATWGDDAEVLAQAWDEEEEGKGWALSR-ELAAEEWQRTSVEVRVGILEWLCNRLMDLPEVGAVLGRRGLCYDTESVERARHPDGHMDTCAVCTLGGDLVLCDACPAVYHYGCVGEKLQGLP-ATWLCPECRF 633 LP P D + Y+ LR+ S L +SPF + + S+L D IHV LL++L + + + G ++ T R W LD +N+P+Y +L + ++G G L+R E+ R + ++ IL LC +MD V + L +R D ++D C +C + G+LV CD CPA YH C+G L+ LP W CPEC F Sbjct: 368 LPPSSPNLNLDGLPIPYVFATYSFLRSFSTVLFLSPFELKDFVEALRFTSPSLLFDSIHVSLLQMLRKDLEKLAGEDDQSATLCLRSLDWDMLDVVNYPLYVVEYL--------------------LFSGSKDGPGVDLTRFNFFRNEYFRLPMALKTEILACLCGDMMDAEVVISELNKR---------SAGGSFDRNVDECFICKMVGNLVCCDGCPAAYHSKCIGVALELLPEGVWYCPECSF 584
BLAST of NO10G02890 vs. NCBI_GenBank
Match: XP_015952741.1 (DDT domain-containing protein PTM [Arachis duranensis]) HSP 1 Score: 97.1 bits (240), Expect = 8.400e-16 Identity = 69/262 (26.34%), Postives = 108/262 (41.22%), Query Frame = 0 Query: 404 VWRALGCYTCLRTLSRFLAVSPFPALALLRGMCAPQRSMLLDEIHVQLLRVLARGYKGMGGMNKLLTPKARC---SSWAYLDRINWPVYFHFFLKAREEISWATWGDDAEVLAQAWDEEEEGKGWALSREL----AAEEWQRTSVEVRVGILEWLCNRLMDLPEVGAVLGRRGLC------------YDTESVER---------------ARHPDGHMDTCAVCTLGGDLVLCDACPAVYHYGCVGEKLQGLP-ATWLCPEC 631 V Y CLR+ S L +SPF L+ + + S+L D IHV +L L + + + N+ + + C +W +LD + WP++ +L G G+ S L ++ + V V+VGIL++LC+ +++ + + L RR L +DT R A D + D C +C + G+L+ CD CPA +H CVG LP W CPEC Sbjct: 467 VLEVFSIYACLRSFSTLLFLSPFELEDLVAALKSETPSVLFDSIHVSILETLRKHLEYLS--NEGIQSASDCLRNLNWDFLDIVTWPIFMAEYLLI------------------------HGSGFKTSFNLNYSNFTADYYKQPVNVKVGILQYLCDDMIEAEAIRSELNRRSLVTENSVASDQNMYFDTCKKRRAGTDVSGGSCLTEEIADDTDWNSDDCYLCKMDGNLICCDGCPAAFHSKCVGIASDNLPEGDWYCPEC 702
BLAST of NO10G02890 vs. NCBI_GenBank
Match: XP_016187874.1 (DDT domain-containing protein PTM [Arachis ipaensis]) HSP 1 Score: 97.1 bits (240), Expect = 8.400e-16 Identity = 69/262 (26.34%), Postives = 108/262 (41.22%), Query Frame = 0 Query: 404 VWRALGCYTCLRTLSRFLAVSPFPALALLRGMCAPQRSMLLDEIHVQLLRVLARGYKGMGGMNKLLTPKARC---SSWAYLDRINWPVYFHFFLKAREEISWATWGDDAEVLAQAWDEEEEGKGWALSREL----AAEEWQRTSVEVRVGILEWLCNRLMDLPEVGAVLGRRGLC------------YDTESVER---------------ARHPDGHMDTCAVCTLGGDLVLCDACPAVYHYGCVGEKLQGLP-ATWLCPEC 631 V Y CLR+ S L +SPF L+ + + S+L D IHV +L L + + + N+ + + C +W +LD + WP++ +L G G+ S L ++ + V V+VGIL++LC+ +++ + + L RR L +DT R A D + D C +C + G+L+ CD CPA +H CVG LP W CPEC Sbjct: 467 VLEVFSIYACLRSFSTLLFLSPFELEDLVAALKSKTPSILFDSIHVSILETLRKHLEYLS--NEGIQSASDCLRNLNWDFLDIVTWPIFMAEYLLI------------------------HGSGFKTSFNLNYSNFTADYYKQPVNVKVGILQYLCDDMIEAEAIRSELNRRSLVTENSVGSDQNMYFDTCKKRRAGTDVSGGSCLTEEIADDTDWNSDDCYLCKMDGNLICCDGCPAAFHSKCVGIASDNLPEGDWYCPEC 702
BLAST of NO10G02890 vs. NCBI_GenBank
Match: XP_014497711.1 (DDT domain-containing protein PTM isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 96.3 bits (238), Expect = 1.400e-15 Identity = 82/294 (27.89%), Postives = 122/294 (41.50%), Query Frame = 0 Query: 376 PESIWVPPETAGHALPSEFPCSPADCSLVWRALGCYTCLRTLSRFLAVSPFPALALLRGMCAPQRSMLLDEIHVQLLRVLARGYKGMG-GMNKLLTPKARCSSWAYLDRINWPVYFHFFLKAREEISWATWGDDAEVLAQAWDEEEEGKGWALSRELAAEEWQRTSVEVRVGILEWLCNRLMDLPEVGAVLGRR-----GLCYD------TESVERARHP-------------------------DGHMDTCAVCTLGGDLVLCDACPAVYHYGCVGEKLQGLP-ATWLCPECR 632 P + +PP + +P S V L Y LR+ S L +SPF + + + LLD IH+ L+RVL R + + ++ T RCS W+ LD + WPV+ +L A +G + + E KG+ E+ E+ S ++ IL+ LC+ ++ E A + R G+ YD TE R HP DG+ D C +C + G L+ CD CPAVYH C+G +P W CPEC+ Sbjct: 160 PSAPTLPPSSGTIGVPE---------SCVLNLLSVYGFLRSFSIRLFLSPFTLDEFVGALNCKVSNTLLDAIHISLMRVLRRHLENISPDGSRRATKCLRCSDWSLLDALTWPVFTFQYL--------AIYG---------YTKGPEWKGF--YDEIFHGEYYLLSASRKLMILQILCDDVLASEEFKAEMNMREESEVGIDYDNEDSLPTEIGPRRVHPRYSKTTACKDSETKKYGSELNAEDVDGNGDECRLCGMDGTLLCCDGCPAVYHSRCIGVMKMHIPDGEWYCPECK 425 The following BLAST results are available for this feature:
BLAST of NO10G02890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G02890 ID=NO10G02890|Name=NO10G02890|organism=Nannochloropsis oceanica|type=gene|length=8034bpback to top protein sequence of NO10G02890.1 >NO10G02890.1-protein ID=NO10G02890.1-protein|Name=NO10G02890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=2493bpback to top protein sequence of NO10G02890.2 >NO10G02890.2-protein ID=NO10G02890.2-protein|Name=NO10G02890.2|organism=Nannochloropsis oceanica|type=polypeptide|length=2482bpback to top Synonyms
Publications
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