NO10G02380, NO10G02380 (gene) Nannochloropsis oceanica

Overview
NameNO10G02380
Unique NameNO10G02380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4295
Alignment locationchr10:650025..654319 -

Link to JBrowse

Properties
Property NameValue
DescriptionS-adenosylmethionine carrier 1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:650025..654319 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
BLAST of NO10G02380 vs. NCBI_GenBank
Match: EWM25368.1 (s-adenosylmethionine carrier 1 [Nannochloropsis gaditana])

HSP 1 Score: 467.6 bits (1202), Expect = 4.400e-128
Identity = 256/362 (70.72%), Postives = 296/362 (81.77%), Query Frame = 0
Query:   96 PSSFSP--IKRPNPVRSQQRHPLALADSRLGLHMQALLGRTNNGTRLALAGALAGGFSNLVLYPIDLAKTLKQAGPSSKGASLASQARIYGLGSLWAGLTPAIVGSMPSSALYFGVYEYVKRRLTVLANASSVPMTSSSPSSTGD---DLYGQRPHILRRWLVHAVAAASGNTASSLVFVPKEVLKQQLQMYRNSHGGSSTTLPRVLASILKDKGILGLYSGYRATLLRNIPSAILRFALYEEFKLFLGXXXXXXXXXXXXXXGAAKWLSLSAPQVAIAAGALAGAFSSAATTPLDVVKTRMAINACPPGRDVLGCLVEVAQREGVPGLYAGLGFRVLYSALFTAVGFSSFEASKALLGVGD 453
            PS F+   + RP+  R Q+R  +ALAD   G  +Q LL R N+GTRLALAGALAGGFSN+VLYPID+AKTL+QAGP+S+GASL+SQARIYGLGSLWAGLTPA++GSMPSSALYFGVYEYVKRRL     A   P T +S S + D   +LY +R  +LRRW  HA+AAA+GNTASSL+FVPKEVLKQQLQMYRN+HGG+S   P V ASIL++KG+ GLYSGYRATLLRNIPSA+LRFALYEEFKL+LG              GA   +SLS P+VA+ AGALAGA SSAATTPLDV+KTRMAINACPPGRDVLGCL++VAQ+EGVPGLYAG+ FRV+YSALFTAVGFSSFEASKALLGVG+
Sbjct:   72 PSKFAQKVVGRPSR-RRQRRTSIALAD---GGRIQELLARMNSGTRLALAGALAGGFSNMVLYPIDVAKTLRQAGPASRGASLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLV----AGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLG---------GQALSGA---ISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALLGVGE 413          
BLAST of NO10G02380 vs. NCBI_GenBank
Match: CBJ28138.1 (mitochondrial carrier protein-like [Ectocarpus siliculosus])

HSP 1 Score: 211.8 bits (538), Expect = 4.400e-51
Identity = 136/316 (43.04%), Postives = 178/316 (56.33%), Query Frame = 0
Query:  139 RLALAGALAGGFSNLVLYPIDLAKTLKQAGPSS-KGA--SLASQARIYGLGSLWAGLTPAIVGSMPSSALYFGVYEYVKRRLTVLANASSVPMTSSSPSSTGDDLYGQRPHILRRWLVHAVAAASGNTASSLVFVPKEVLKQQLQMY-RNSHGGSSTTLPRVLASILKDKGILGLYSGYRATLLRNIPSAILRFALYEEFKLFLGXXXXXXXXXXXXXXGAAKWLSLSAPQVAIAAGALAGAFSSAATTPLDVVKTRMAINACPPGRDVLGCLVEVAQREGVPGLYAGLGFRVLYSALFTAVGFSSFEASKALLGV 451
            ++A+AGA+AG  +   L+PID AKTL+QA P + KG   +LA   R  G  +++ G+  A+VG+MPSSALYFG YE VK RL  +A A++ P     P   G                          ASSL+FVPKE +KQ LQ     + GG+  T   ++   +K+KG+ GLY GY ATL RN+PSAI+RF+LYEE KLF+G                     +SAP   + AGALAGA +S  TTP DV+KTR+A  +   GR     +  +   +G  GLYAG   RV+ S LFTAVGF SFEA K +LGV
Sbjct:   26 KMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVA-ANNFPAGPGGPRE-GXXXXXXXXXXXXXXXXXXXXXXXXXAASSLIFVPKEYVKQTLQASGMGAAGGARETAKEIVRRTVKEKGVKGLYRGYWATLSRNVPSAIIRFSLYEEIKLFIGPARL-----------------MSAPPAYLLAGALAGACASGMTTPFDVLKTRVATGSLEGGRGFAKNMATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKVVLGV 322          
BLAST of NO10G02380 vs. NCBI_GenBank
Match: GAX20779.1 (hypothetical protein FisN_7Hh090 [Fistulifera solaris])

HSP 1 Score: 194.1 bits (492), Expect = 9.400e-46
Identity = 132/315 (41.90%), Postives = 170/315 (53.97%), Query Frame = 0
Query:  139 RLALAGALAGGFSNLVLYPIDLAKTLKQAGP---SSKGASLASQARIYGLGSLWAGLTPAIVGSMPSSALYFGVYEYVKRRLTVLANASSVPMTSSSPSSTGDDLYGQRPHILRRWLVHAVAAASGNTASSLVFVPKEVLKQQLQMYRNSHGGSSTTLPRVLASILKDKGILGLYSGYRATLLRNIPSAILRFALYEEFKLFLGXXXXXXXXXXXXXXGAAKWLSLSAPQVAIAAGALAGAFSSAATTPLDVVKTRMAINACPPGRDVLGCLVEVAQREGVPGLYAGLGFRVLYSALFTAVGFSSFEASKALLGV 451
            R+  +G +AG     +LYPID AKTL+QA P   SS  A+L S  + Y       G+ PA +G++P+SALYFG YE +K  L  +            P+        Q P +  R L+HA AAASGN  SS++FVPKE +KQQLQ       GSST++   +A      G+ GLY GY+ATLLRNIPSA LRF LYEE K  L                   W          AAGA++GA +S   TP+DV+KTRM++  CP   D+ GC   V    G   LYAG G R+L+S LF+A GF +FE  K  + V
Sbjct:   73 RVGWSGGIAGAVGTTLLYPIDSAKTLRQANPEQFSSVWAALWSSRQWY------RGVVPAAIGAIPASALYFGAYEAMKSLLLQV-------QVQRQPAH-------QPPTVASRLLLHASAAASGNILSSMIFVPKEFIKQQLQY------GSSTSIQHCVA----QHGLRGLYRGYQATLLRNIPSAALRFVLYEELKYAL--------YTSRGEDAVGSWR-------LFAAGAVSGALASGFLTPMDVLKTRMSVGQCPV--DLPGCFHHVLDTAGWTALYAGAGSRMLFSGLFSAAGFGTFETVKRWMKV 340          
BLAST of NO10G02380 vs. NCBI_GenBank
Match: GAX11720.1 (hypothetical protein FisN_7Lh090 [Fistulifera solaris])

HSP 1 Score: 193.0 bits (489), Expect = 2.100e-45
Identity = 129/312 (41.35%), Postives = 168/312 (53.85%), Query Frame = 0
Query:  139 RLALAGALAGGFSNLVLYPIDLAKTLKQAGPSSKGASLASQARIYGLGSLWAGLTPAIVGSMPSSALYFGVYEYVKRRLTVLANASSVPMTSSSPSSTGDDLYGQRPHILRRWLVHAVAAASGNTASSLVFVPKEVLKQQLQMYRNSHGGSSTTLPRVLASILKDKGILGLYSGYRATLLRNIPSAILRFALYEEFKLFLGXXXXXXXXXXXXXXGAAKWLSLSAPQVAIAAGALAGAFSSAATTPLDVVKTRMAINACPPGRDVLGCLVEVAQREGVPGLYAGLGFRVLYSALFTAVGFSSFEASKALLGV 451
            R+  +G +AG     +LYPID AKTL+QA P    +  A+   ++     + G+ PA VG++P+SALYFG YE +K  L  +            P+        Q P +  R L+HA AAASGN  SS++FVPKE +KQQLQ       GSST++   LA      G+ GLY GY+ATLLRNIPSA LRF LYEE K  L                   W          AAGA++GA +S   TP+DV+KTRM++  CP   D+ GC   V    G   LYAG G R+L+S LF+A GF +FE  K  + V
Sbjct:  121 RVGWSGGIAGAVGTTLLYPIDSAKTLRQANPEQFPSVWAA---LWSSRQWYRGVVPAAVGAIPASALYFGAYEAMKSLLLQV-------QVQRQPAH-------QPPTVSSRLLLHASAAASGNILSSMIFVPKEFIKQQLQY------GSSTSIQHCLA----QHGLRGLYRGYQATLLRNIPSAALRFVLYEELKYAL--------YTSRGEEAVGSWR-------LFAAGAVSGALASGFLTPMDVLKTRMSVGQCPV--DLPGCFHHVLDTAGWTALYAGAGSRMLFSGLFSAAGFGTFETVKRWMKV 388          
BLAST of NO10G02380 vs. NCBI_GenBank
Match: XP_005534947.1 (similar to mitochondrial carrier protein [Cyanidioschyzon merolae strain 10D] >BAM80340.1 similar to mitochondrial carrier protein [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 190.3 bits (482), Expect = 1.400e-44
Identity = 121/318 (38.05%), Postives = 177/318 (55.66%), Query Frame = 0
Query:  139 RLALAGALAGGFSNLVLYPIDLAKTLKQAGPSSKGASLAS----QARIYGLGSLWAGLTPAIVGSMPSSALYFGVYEYVKRRLTVLANASSV-PMTSSSPSSTGDDLYGQRPHILRRWLVHAVAAASGNTASSLVFVPKEVLKQQLQMYRNSHGGSSTTLPRVLASILKDKGILGLYSGYRATLLRNIPSAILRFALYEEFKLFLGXXXXXXXXXXXXXXGAAKWLSLSAPQV-AIAAGALAGAFSSAATTPLDVVKTRM--AINACPPGRDVLGCLVEVAQREGVPGLYAGLGFRVLYSALFTAVGFSSFEASKALL 449
            R ALAG LAG   N VL+PID  K+++QA    +  S  S      R  G G+L+ G+ PA++G+  SSA+YFG YE V+  L            T S  + +  D +     + +R L+H +AAASGN  SS +FVPKEV+KQ+LQ  R S           +  +   + + GLY GYRATLLRN+P+A+L F LYEE KL +G                    + + P +  + AG+LAGA SS  TTP DV+KTR   A ++    R ++    E+ ++EG+ GL+ G+G R +++ +F+A+GF+++E  K LL
Sbjct:   40 RAALAGGLAGAIVNSVLHPIDTIKSVRQADTWRRSQSTWSVFWQLVRESGPGALYRGVVPAVLGAATSSAVYFGTYESVRALLVWYEQQRHCRAKTGSQATHSARDAHLVARSLSKRGLIHMIAAASGNVVSSFIFVPKEVIKQRLQTGRES----------TVREVFAHQHLRGLYWGYRATLLRNVPNAMLNFVLYEELKLRIGQLRTAVQQCMGGSRTQTTQTTEAFPTLDLLMAGSLAGALSSTLTTPFDVLKTRFGTASSSAVASRSLMSLAAEILRQEGLGGLFRGVGTRAVWAGMFSAIGFTTYERCKDLL 347          
BLAST of NO10G02380 vs. NCBI_GenBank
Match: XP_002178530.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC50195.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 164.5 bits (415), Expect = 8.000e-37
Identity = 103/254 (40.55%), Postives = 139/254 (54.72%), Query Frame = 0
Query:  189 WAGLTPAIVGSMPSSALYFGVYEYVKRRLTVLANASSVPMTSSSPSSTGDDLYGQRPHILRRWLVHAVAAASGNTASSLVFVPKEVLKQQLQMYRNSHGGSSTTLPRVLASILKDKGILGLYSGYRATLLRNIPSAILRFALYEEFKLFLGXXXXXXXXXXXXXXGAAKWLSLSAPQVAIAAGALAGAFSSAATTPLDVVKTRMAINACPPGRDVLGCLVEVAQREGVPGLYAGLGFRVLYSALFTAVGFSSFE 443
            +AG+ PA +G++PSSALYFG YE +K  +      + +P       +             R W +HA+AAASGN  SS VFVPKE +KQQ+Q Y+    G      +V   +++ KG  GLYSGY ATL+RNIPSA+LRF LYEE K                      W          AAGA+AG+ +S   TP+DV+KTR++   CP   D+ GC+  +   +G  GLYAG G R+L+S  F ++GF SFE
Sbjct:    1 YAGVIPATLGAIPSSALYFGAYESMKMFI-----KNRIPAAEDDGKN-------------RLW-IHALAAASGNIMSSAVFVPKETIKQQMQFYQAGSVG------QVCVKLVQQKGFRGLYSGYCATLMRNIPSAMLRFVLYEELKF-----RWHTNQESSRNHSQFSW-------KLFAAGAVAGSLASGFMTPIDVMKTRLSTGTCP--IDMPGCMNHIIAEQGWKGLYAGAGSRMLWSGAFASIGFGSFE 215          
BLAST of NO10G02380 vs. NCBI_GenBank
Match: GAQ90610.1 (mitochondrial substrate carrier family protein [Klebsormidium nitens])

HSP 1 Score: 160.2 bits (404), Expect = 1.500e-35
Identity = 125/350 (35.71%), Postives = 168/350 (48.00%), Query Frame = 0
Query:  141 ALAGALAGGFSNLVLYPIDLAKTLKQAGPSSKGASLASQA--------RIYGLGSLWAGLTPAIVGSMPSSALYFGVYEYVKR---RLTVLANASSVPMTSSSPSSTGDDLYGQRPHILRRWLVHAVAAASGNTASSLVFVPKEVLKQQLQMYRNSHGGSSTTLPRVLASILKDKGILGLYSGYRATLLRNIPSAILRFALYEEFKLFLGXXXXXXXXXXXXXXGAAKWLSLSA-----PQVAIAAGALAGAFSSAATTPLDVVKTRMAINA--------------------------CPPGRDVLGCLVEVAQREGVPGLYAGLGFRVLYSALFTAVGFSSFEASKALL 449
            ALAG LAGGF+N  L+P+D  KT  Q   +  G +L + A           G+   + GL  A+VGS+PSSA+YFG YE  K    RL   AN                           R  V   AAA GN ASS + VPKE++KQ+LQ       G + T   VLASI++++G+ GLY GY A LLRN+PS ++ F+ +E  K                    A WL+ S      P  ++ +GA+AG  S+AATTPLDVVKTR+   A                           P G  V+  L +++  EG  GL  G G R++Y   F+A+GF SFE +K +L
Sbjct:   14 ALAGGLAGGFTNATLHPLDTVKTKLQ---TKGGTALYTGAWDVVRKVLAKQGIRGFYRGLPAAVVGSIPSSAVYFGTYELGKELLLRLPAFAN--------------------------NRLAVPPFAAAVGNIASSAILVPKELVKQRLQ------AGVAGTAGGVLASIVREEGVKGLYRGYSAALLRNVPSNVISFSTFEYLK--------------------AGWLAGSGDAELQPWQSLLSGAVAGMLSAAATTPLDVVKTRLMTEARQAVSRTGATGKVAEAVAKAQFVSAFTPSG--VVSTLRQISAEEGFKGLVRGAGPRIVYGGCFSAMGFLSFETAKHIL 306          
BLAST of NO10G02380 vs. NCBI_GenBank
Match: CEM02746.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 159.8 bits (403), Expect = 2.000e-35
Identity = 119/328 (36.28%), Postives = 167/328 (50.91%), Query Frame = 0
Query:  141 ALAGALAGGFSNLVLYPIDLAKTLKQA----------GPSSKGASLASQARI---YGLGSLWAGLTPAIVGSMPSSALYFGVYEYVKRRLTVLANASSVPMTSSSPSSTGDDLYGQRPHILRRWLVHAVAAASGNTASSLVFVPKEVLKQQLQMYRNSHGGSSTTLPRV--LASILKDKGILGLYSGYRATLLRNIPSAILRFALYEEFK-LFLGXXXXXXXXXXXXXXGAAKWLSLSAPQVAIAAGALAGAFSSAATTPLDVVKTRMAINACPPGRDVLGCLVEVAQREGVPGLYAGLGFRVLYSALFTAVGFSSFEASKALLGVGD 453
            ALAG LAG F+  VL+P+D  K   Q              S G +L +   I    G+G+L++G  P+++G++PSSALYFG YE VK R T +  A    +     S  G    G  P + +R  V+A+AAASGN  S++VFVPKE +KQQLQ  ++   G+   L  V  L + +K+ GI G+Y GYRATL+RN+PS++LRF+++EE K L +                +A +L    P     AGA                              +   L  + + +G+  L AG+  RVLYS LF+AVG  SFEA K+ L V D
Sbjct:   18 ALAGGLAGSFATAVLHPVDTVKVYIQIERRREHTGHHHRPSLGDTLRTMRAIRKEKGIGALYSGFLPSVLGALPSSALYFGAYELVKSRATSVLEARRRRL-----SGEGGCQNGPLP-VQQRAFVNALAAASGNAVSAMVFVPKEFVKQQLQASKSGAIGAGQILSSVDILWAAVKESGIKGVYRGYRATLVRNVPSSVLRFSVFEELKRLIVSTCVTPSSQLPSFSLRSAAYL----PVYLFLAGAXXXXXXXXXXXXXXXXXXXXXXXXLSQDMSIGQNLRTLWKEQGMSSLLAGMKTRVLYSGLFSAVGLGSFEAFKSALRVSD 335          
BLAST of NO10G02380 vs. NCBI_GenBank
Match: XP_020197643.1 (protein MITOFERRINLIKE 1, chloroplastic [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 159.1 bits (401), Expect = 3.400e-35
Identity = 113/303 (37.29%), Postives = 158/303 (52.15%), Query Frame = 0
Query:  150 FSNLVLYPIDLAKTLKQAGPSSKGA--SLASQARIYGLGSLWAGLTPAIVGSMPSSALYFGVYEYVKRRLTVLANASSVPMTSSSPSSTGDDLYGQRPHILRRWLVHAVAAASGNTASSLVFVPKEVLKQQLQMYRNSHGGSSTTLPRVLASILKDKGILGLYSGYRATLLRNIPSAILRFALYEEFKLFLGXXXXXXXXXXXXXXGAAKWLSLSAPQVAIAAGALAGAFSSAATTPLDVVKTRM--AINACPPGRDVLGCLVEVAQREGVPGLYAGLGFRVLYSALFTAVGFSSFEASKALL 449
            F+   L P+D  KT  QAG +S+G+    A   R  G   L+ GL+  I+GS  SSA+YFG  E  K  L                          RPH L  +LV  +A ASGN +SS + VPKE++ Q+LQ      G ++    +VL  IL++ G  GLY+GY ATLLRN+P+ +L ++ +E  K F                 AA       P  ++  GALAGA S+  TTPLDVVKTR+   + A    R V+G + EV   EG+ GL  G+G RVL+SA F A+G+ +FE ++ ++
Sbjct:   95 FTYAALLPLDAVKTRLQAGAASRGSWQVFADILRADGPLGLYRGLSAVILGSATSSAIYFGTCELAKSLL--------------------------RPH-LPPFLVPPLAGASGNISSSAIMVPKELITQRLQ-----SGAATGRSWQVLLQILQNDGFFGLYAGYAATLLRNLPAGVLSYSSFEYLKAF-----------ALSKSSAAN----LTPGESVLCGALAGAISAGLTTPLDVVKTRLMTRVGAAQGSRTVVGTMQEVIAEEGLMGLSRGIGPRVLHSACFAAIGYCAFETARLMI 350          
BLAST of NO10G02380 vs. NCBI_GenBank
Match: BAK04140.1 (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 154.5 bits (389), Expect = 8.300e-34
Identity = 113/307 (36.81%), Postives = 156/307 (50.81%), Query Frame = 0
Query:  150 FSNLVLYPIDLAKTLKQAGPSSKGA--SLASQARIYGLGSLWAGLTPAIVGSMPSSALYFGVYEYVKRRLTVLANASSVPMTSSSPSSTGDDLYGQRPHILRRWLVHAVAAASGNTASSLVFVPKEVLKQQLQMYRNSHGGSSTTLPRVLASILKDKGILGLYSGYRATLLRNIPSAILRFALYEEFKLFLGXXXXXXXXXXXXXXGAAKWLSLS-----APQVAIAAGALAGAFSSAATTPLDVVKTRMAINACPPG-RDVLGCLVEVAQREGVPGLYAGLGFRVLYSALFTAVGFSSFEASKALL 449
            F+   L P+D  KT  QAG +S+G+    A   R  G   L+ GL+  I+GS  SSA+YFG  E  K  L                          R H L  +LV  +A ASGN +SS + VPKE++ Q+LQ      G ++    +VL  IL+  G  GLY+GY ATLLRN+P+ +L ++ +E  K F                     LS S      P  ++  GALAGA S+  TTPLDVVKTR+       G R V+G + EV   EG+ GL  G+G RVL+SA F A+G+ +FE ++ ++
Sbjct:   95 FTYAALLPLDAVKTRLQAGAASRGSWQVFADILRTDGPLGLYRGLSAVIIGSATSSAIYFGTCELAKSLL--------------------------RSH-LPPFLVPPLAGASGNISSSAIMVPKELITQRLQ-----SGAATGRSWQVLLQILQTDGFFGLYAGYAATLLRNLPAGVLSYSSFEYLKAFA--------------------LSKSNAPNLTPGESVLCGALAGAISAGLTTPLDVVKTRLMTRVGAQGSRTVVGTMQEVIAEEGLMGLSRGIGPRVLHSACFAAIGYCAFETARLMI 349          
The following BLAST results are available for this feature:
BLAST of NO10G02380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25368.14.400e-12870.72s-adenosylmethionine carrier 1 [Nannochloropsis ga... [more]
CBJ28138.14.400e-5143.04mitochondrial carrier protein-like [Ectocarpus sil... [more]
GAX20779.19.400e-4641.90hypothetical protein FisN_7Hh090 [Fistulifera sola... [more]
GAX11720.12.100e-4541.35hypothetical protein FisN_7Lh090 [Fistulifera sola... [more]
XP_005534947.11.400e-4438.05similar to mitochondrial carrier protein [Cyanidio... [more]
XP_002178530.18.000e-3740.55predicted protein, partial [Phaeodactylum tricornu... [more]
GAQ90610.11.500e-3535.71mitochondrial substrate carrier family protein [Kl... [more]
CEM02746.12.000e-3536.28unnamed protein product [Vitrella brassicaformis C... [more]
XP_020197643.13.400e-3537.29protein MITOFERRINLIKE 1, chloroplastic [Aegilops ... [more]
BAK04140.18.300e-3436.81predicted protein [Hordeum vulgare subsp. vulgare][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001106NSK001106Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G02380.1NO10G02380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|527064gene_3975Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100005g15gene5048Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G02380.1NO10G02380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G02380 ID=NO10G02380|Name=NO10G02380|organism=Nannochloropsis oceanica|type=gene|length=4295bp
GTTGTGCTTTGGCGGAAAAGATTCTTTGCCTTCTGCCCATTGTCTCTTTC
TATGTCACATCGGTTTCATTAACGTCCTCGTCCCCCATCTCTCATTCTGC
CGCTGCTGGCGCTGCAGGGCCGTGTCCCGGCCCACTTAACCGAGCGTCAG
CGAATACAATCACATTCTCAATATGCCTCGTCTGAGGGAACAAATCAAAA
GGCTGGAGCTCCTCGATTTCATATCCACTCCTTACAAGCACCTGCGCGTC
TCTCGCTTGCGTGGCTGGGTCACAACTTACGTACACAATCCTTGCCGGTC
GAAACGCACAAAGCTGCGTCAAAAAGTCTTCATCACACCCTTTGCGGGGG
GGGTCTATGATCATTACCGTTTCCTGACCTCGTATATGCTTTATCCCCGC
GAATATATCACTCGCATCCCCCGCGCGAAAGTGACAATTCGTAATCTCGT
TTAAGTCGGCGTTCCTCCTTGCACTTAGTATAGCCAACTCACTTATCTCC
ACCCCATAACACGCCTCGAAATCCTTACTTGCTGAGAGACAAAACAACCC
CCCCCCACAGTAAGCGTCCACCAAAAACCTCATTCCTCCTTCCCTCGCCT
TTCCTGTCACGTATCCAACCATCTCCGGCAACATAAACGGATTATTTTGA
AAGAAACTGCCCGCCGTGTATTTAAACGTCAACCCCCTGATTTTATCCGA
CACTTCTACCCTCGGGTCAGTCACCACCCCCTCCTGCGTTTCTCTCAAGA
ACAATGTTGCCCCCTTCGGTTTCTTGGGAGTCTCCTCCGCTGCCGCAGCG
CGGGCTCGTGCACGGACCTCTTCTCGAAGTCCCATCAATCGGGCATTGAT
TGCTGGAGTGGCGATGGCGCATTGCTCGACGTCGACTAAGGCTCGAGAAC
CGAGCTTAAGGAAGCCAATATCTTTGATTTCTCCCCCACGAGGTTTTTCG
TGGTGGGGGGTAATCTTACTGCGGTACCCCAACACGTCATCTGTCCCAAT
TACTTTCTGCACGGCCACATTCGTGATGTTTCCTGTCCGGGCAAGCACGT
CAACGACATGCTGTTGTTTCCAATCTCTCTGGGCAGTTATACTCATATGT
TGGTATTGACAACCCCCACACCTCCCAAACAAAGAACAAACGGGCTCAAC
ACGGGCTGGAGAAGCTTCTATGACTTCGACTAGATCAGCTTCTGAGTAGT
TTTTGTGGTTGCGGTAGATGCGGAGGCGGATCCGCTCGCCGGGAATGACA
CCGGGGACCATTATCACCCAGCTTTCCGGCGCCACTGGTGCTGCTGATCT
CTCTCTTTCTACAGGCGGTGGTGGTGGTATAGGTGACGAAGAGGAATTCG
AGTCACTTGTGAACGTTGGGGATGATTGTAATGGCAAGGATGTGCGGCAA
ATGCCGAGGCCCAGATTGGTAAGACTATCGACAGTGAGCTCGAGCTCCTC
ATGGTATAGGAAAGGACCTTGCCATGGTTTTTGCTTGCGGGCCTGTTGCT
TCTTTTGCTTCGGCTGGGCGGGAGCGGCGTTATCCGCGTCCTCTTCGTCC
CTTTGCGTCAAAGGTACGACGGTCGATTTGATGCGACCCCCGTTGGTGCG
TCGCATGGGCAAGGAGGGACGAGTGTAGGAGGCAGCACTAACGGTGGAGG
TAATCGTAATCGATTGGGAGGGACTAGGGTGCAAGAAGACAAAGGCTGCT
CGACTGACTGGGTTGCGACGCGCCGCGATTCCGCGTAAAATGGAGAGCAG
CATGACAAATGGAAGGAGCCTCTTGTGAGAGCTGAGCCTGCCCATCCCTA
AGAGATTTTGAGGTTGGTCGGATTTTGAGGTTGGTCGGATGGGAGAGGGG
TGAGGAGGTTTGCTGATGTGGGGGTCTCGGATGTCCTAGACAGGACCTCT
CTGTGGCATAAGACAGCTCAGGAGCAGCTGGCACCTCCCTCGTAAGAAAG
ACTACACAATATTGTTTTTGTGGCATTGCCATACCTTGCCTAGTAGAGTT
GCAGTCAAAGCGCAAAGCGCTCGGTCGTCGCCACTTCAGCGTCGCCACGC
TTGTTGCTTCTGTATTTCTCGTTTCAGCACACCCATGCCCTCCCTAAAAC
CCCCAAACAGCCCAAGCCCAAGCACTACCATGGAGATGACAGCAACAATA
GTGCCTGTATTGAGCTGCCGGCCCTGTCCCGGGCGGTCTTCCTATGCGTC
CTGCCTTTCTCGCCTACCATTAGCGCTGCTTTTGTTCGTAGCTCTCCTGC
CCGCTTCCGCCACCTCTTCGAGCAAACGCGCAAGCCTAGCCACCACCACC
ACCACAGCAACCACCACAAAAATGACCTCACTCTTCTCCAGCGTCCAGAA
ATGTATATTTCCTGGGTTTCCTTCATCATTTTCCCCAATAAAACGTCCCA
ATCCTGTCAGAAGTCAGCAACGCCACCCCCTTGCCCTTGCTGATTCCCGC
CTCGGCCTCCACATGCAAGCCCTCCTAGGACGAACCAACAATGGAACCCG
TCTAGCACTGGCTGGAGCACTCGCCGGTGGGTTCAGCAATCTTGTACTCT
ACCCCATTGATTTGGCAAAGACGTTAAAGCAGGCAGGCCCCTCATCCAAA
GGTGCGTCCTTGGCCTCTCAAGCCCGCATCTACGGCCTGGGCTCGCTCTG
GGCCGGTTTAACACCCGCCATCGTTGGATCAATGCCCTCGTCTGCCCTGT
ATTTTGGTGTGTACGAATACGTGAAACGCCGGTTGACTGTCCTCGCCAAT
GCCTCCTCCGTCCCCATGACCTCGTCCTCCCCCTCCTCGACCGGAGATGA
TTTATACGGACAACGGCCCCACATTCTACGCCGGTGGCTGGTACATGCTG
TGGCAGCTGCTTCGGGGAACACGGCCAGCTCCTTGGTGTTTGTTCCTAAA
GAAGTGTTGAAACAACAGTTGCAGATGTACCGCAACAGTCATGGTGGTAG
CTCGACGACCCTCCCTCGTGTCCTCGCATCCATTTTGAAAGATAAGGGCA
TTCTTGGTCTCTATAGTGGGTATCGAGCAACATTGCTCCGGAACATACCC
TCAGCCATTCTGCGATTTGCCCTCTACGAGGAATTCAAGCTTTTTTTAGG
TGGAGGAGGGGCAGCAGCAGTCGTAGCAGCTGCAGGAGCAACAGGTGCAG
CAAAATGGTTGAGCCTCAGCGCACCGCAGGTTGCGATCGCAGCAGGGGCC
TTGGCAGGTGCCTTTTCGAGTGCAGCGACTACGCCATTGGATGTGGTAAA
AACCCGGATGGCCATAAATGCGTGTCCGCCGGGGAGGGACGTACTAGGGT
GTCTCGTTGAGGTTGCGCAACGGGAGGGCGTGCCGGGCTTGTACGCGGGC
CTGGGATTCCGGGTGCTGTACTCAGCCTTGTTCACAGCAGTGGGCTTCTC
GTCGTTTGAGGCCAGCAAGGCCTTGTTGGGGGTGGGGGATGGGGAAAGGC
AGGGCGGGAGGAAGAAGGAGTAGGTGTGGGGGGGGGAGTGATACAAATGA
ATGTGTCAAATGAAGAGGAAGAGAGAGATGAGAGCGACGGCATGAAATAA
GCAAAATGTTCTTCAAAATCAACATAAATCAGACTCTTCTTCTCGACTCT
TTCAGGGCAAGTCTATATGGTTATGGGAGACGGAGCAGTATTTATGGAAA
AAAGTGACGTTGAGTACGACGACCATCTCGTACGTCTTTCTTCTCGAGGT
GTATTCCATCTAGATTCACGAGCCGTAGGAGAAAGAGGAGGCAGGGGGAG
ACAAGGAGGGAGGGGGCTTGTTGTTGACCGGCATGCGTAGATAAAAGGAG
GAAACCCCAGTTGAAATTACAAGGTGCACGTGCTTCCCCTCGTTTTTCTT
GACCTTCCCTTGTCGTTGTGTCGTCGCAGACCGCCGACTGTGGTTGCGGG
TTACTAGGCGAGGACTGAGGTGGGTAGTGAGGGTGCCGACAAAACAGAGG
TACGAAATGGGGTAAAGGAAATGTGCTATGTCTTGTCATGCTTGTGTGAG
TAATAGCTTGGTAGGGGGAGCAAGCTTTGCCAGTCCCACCGGGCGCGGTG
GATTGTGGGGATGCGCGTTGTATCCCAAATGTACAGAAATAGTGGTTAAG
AGGAAGAGATAGGGAGAGCGGCGTTTTATTTGTGGCATGCACTTGAAAGT
TCGATGTGAGTTTTGAGCGAGAAAACCCCAGAAAAAGTAGAGCAATAGAG
GCCTGGTGTGTGTGGCTGGGAGTTTATAGATAGATAGGTGCCTTAGTCAC
GGCAAATGAAAAAAACAGATCAAGATAAAATATATCTCGCGTGAC
back to top

protein sequence of NO10G02380.1

>NO10G02380.1-protein ID=NO10G02380.1-protein|Name=NO10G02380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=463bp
MPSLKPPNSPSPSTTMEMTATIVPVLSCRPCPGRSSYASCLSRLPLALLL
FVALLPASATSSSKRASLATTTTTATTTKMTSLFSSVQKCIFPGFPSSFS
PIKRPNPVRSQQRHPLALADSRLGLHMQALLGRTNNGTRLALAGALAGGF
SNLVLYPIDLAKTLKQAGPSSKGASLASQARIYGLGSLWAGLTPAIVGSM
PSSALYFGVYEYVKRRLTVLANASSVPMTSSSPSSTGDDLYGQRPHILRR
WLVHAVAAASGNTASSLVFVPKEVLKQQLQMYRNSHGGSSTTLPRVLASI
LKDKGILGLYSGYRATLLRNIPSAILRFALYEEFKLFLGGGGAAAVVAAA
GATGAAKWLSLSAPQVAIAAGALAGAFSSAATTPLDVVKTRMAINACPPG
RDVLGCLVEVAQREGVPGLYAGLGFRVLYSALFTAVGFSSFEASKALLGV
GDGERQGGRKKE*
back to top
Synonyms
Publications