NO10G01370, NO10G01370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G01370 vs. NCBI_GenBank
Match: EWM25427.1 (atp-dependent dna helicase q3 [Nannochloropsis gaditana]) HSP 1 Score: 451.1 bits (1159), Expect = 7.900e-123 Identity = 270/474 (56.96%), Postives = 319/474 (67.30%), Query Frame = 0 Query: 20 METQMLQVLRSTFGLNEFREMQMDVISHVLHGGSGLVLFPTGGGKSLCYQLPALLSDGVTIVISPLISLMQDQVTALQARGVKARNFSSAQDASTINQTLAELAALPKPHVKILYITPERLSSPSFAPILQQLHARGLLAAFAVDEAHCISQWGHDFRPAYRQLGMIRAAFPSVPCLALTATATPSVQRDIQMQLSLPPSVVFKRSFDRPNLFYRVEYKSLLRDIHGVLASAIKSEIGPFVCQATKKGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNSFFQSRIGAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAIVYCWKTADCDLLAAELTKRGIPTLAYHGKMKDGQRKEVQGLFSEGLVKVVTASCAFGMGIDKADVRLVVHWTVPNTLEAFYQESGRAGRDGKPAFSLLFYSDHDLSSRQYILAKGLDEGEREGGRGESKEKEVERKGEEL 494 ++ ++++VLR FGL FR+ Q DVI HVL GGSGLVL PTGGGKSLCYQLPALL DGVT+V+SPLI+LM DQVTAL+ +G+ AR SS+ D L +L P+P VK+LY+TPERL++PSF P+LQQLHAR LLAA VDEAHCISQWGHDFRP+YR+L +RA FPS+PCL LTATATP VQRDI L LPPS VF++SFDRP+LFYRVEYK LL D VLA+AIK IG + G+ G XXXXXXXXXXXXXXXXXXX +R+G GGSAIVYCWK C+ LA L RG+ LAYHGK+ D +R+ VQ +F EG V+VV A+ AFGMGIDKADVR+V HW +P +LEAFYQESGRAGRDG PA SLLFY D R ++L K L EG E GR K++ VERK E+L Sbjct: 16 LDARIVEVLRIAFGLQTFRQPQKDVIKHVLQGGSGLVLLPTGGGKSLCYQLPALLLDGVTVVVSPLIALMNDQVTALRKKGIDARYCSSSLDPYLNKDILDDLRLRPEPRVKLLYVTPERLTTPSFLPVLQQLHARKLLAALIVDEAHCISQWGHDFRPSYRRLEEVRALFPSLPCLGLTATATPRVQRDIVSTLRLPPSHVFRKSFDRPSLFYRVEYKPLLPDAQEVLATAIKQAIG-----WRESGQGG-------------VPXXXXXXXXXXXXXXXXXXXXXXXXXXNRLG-----------------------------QNCAGGSAIVYCWKRETCEELARALEGRGLSALAYHGKLPDARRRHVQAMFVEGGVQVVAATLAFGMGIDKADVRVVAHWNIPPSLEAFYQESGRAGRDGGPALSLLFYCPRDAEGRFHMLHKEL-EGHGEAGR--EKQQAVERKKEQL 439
BLAST of NO10G01370 vs. NCBI_GenBank
Match: XP_021615791.1 (ATP-dependent DNA helicase Q-like 3 [Manihot esculenta] >XP_021615793.1 ATP-dependent DNA helicase Q-like 3 [Manihot esculenta] >XP_021615799.1 ATP-dependent DNA helicase Q-like 3 [Manihot esculenta] >XP_021615808.1 ATP-dependent DNA helicase Q-like 3 [Manihot esculenta]) HSP 1 Score: 308.5 bits (789), Expect = 6.300e-80 Identity = 181/494 (36.64%), Postives = 257/494 (52.02%), Query Frame = 0 Query: 24 MLQVLRSTFGLNEFREMQMDVISHVLHGGSGLVLFPTGGGKSLCYQLPALLSDGVTIVISPLISLMQDQVTALQARGVKARNFSSAQDASTINQTLAELAALPKPHVKILYITPERLSSPSFAPILQQLHARGLLAAFAVDEAHCISQWGHDFRPAYRQLGMIRAAFPSVPCLALTATATPSVQRDIQMQLSLPPSVVFKRSFDRPNLFYRVEYKSLLRDIHGVLASAIKSEIGPFVCQATKKGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNSFFQSRIGAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAIVYCWKTADCDLLAAELTKRGIPTLAYHGKMKDGQRKEVQGLFSEGLVKVVTASCAFGMGIDKADVRLVVHWTVPNTLEAFYQESGRAGRDGKPAFSLLFYSDHDLSSRQYILAKGLDEGEREGGRGESKEKEVERKGEELMKVREYALEGGGCWRRKLLAYFGE 518 ++++LR FG ++FR Q++ I VL G L PTGGGKS+CYQ+PAL G+ +V+SPLI+LM++QV AL+ +G+ A SS Q + N+ +L + KP ++LY+TPE +++P F L ++HARG L A+DEAHCIS WGHDFRP+YR+L +R+ P VP LALTATA P VQ+D+ L L +V K SF+RPN++Y V YK LL D + L+ +KS VC AI+YC + CD+L+A L+K GI AYH + + R V + ++VV A+ AFGMGID+ DVR+V H+ VP ++EAFYQESGRAGRD P SLL+Y D ++IL ++ S+++ ++ + ++ EY EG GC R+K+L FGE Sbjct: 24 LVKLLRWHFGFSDFRGKQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEFLSSTQTSHVKNKIHEDLDS-GKPSTRLLYVTPELIATPGFTSKLTRIHARGSLKLIAIDEAHCISTWGHDFRPSYRKLSSMRSCLPDVPILALTATAVPKVQKDVIDSLCLQDPLVLKSSFNRPNIYYEVRYKDLLDDAYADLSFVLKS--SGDVC------------------------------------------------------------------------------------------AIIYCLERTTCDVLSAHLSKNGISCAAYHAGLNNKLRSSVLDDWMSSKIQVVVATVAFGMGIDRKDVRIVCHFNVPKSMEAFYQESGRAGRDQLPCRSLLYYGVDDRKKMEFILRSA---ASKQSESSSSQDRLSKKSISDFNQMVEYC-EGSGCRRKKILESFGE 420
BLAST of NO10G01370 vs. NCBI_GenBank
Match: XP_006467040.1 (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Citrus sinensis]) HSP 1 Score: 307.0 bits (785), Expect = 1.800e-79 Identity = 183/494 (37.04%), Postives = 255/494 (51.62%), Query Frame = 0 Query: 24 MLQVLRSTFGLNEFREMQMDVISHVLHGGSGLVLFPTGGGKSLCYQLPALLSDGVTIVISPLISLMQDQVTALQARGVKARNFSSAQDASTINQTLAELAALPKPHVKILYITPERLSSPSFAPILQQLHARGLLAAFAVDEAHCISQWGHDFRPAYRQLGMIRAAFPSVPCLALTATATPSVQRDIQMQLSLPPSVVFKRSFDRPNLFYRVEYKSLLRDIHGVLASAIKSEIGPFVCQATKKGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNSFFQSRIGAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAIVYCWKTADCDLLAAELTKRGIPTLAYHGKMKDGQRKEVQGLFSEGLVKVVTASCAFGMGIDKADVRLVVHWTVPNTLEAFYQESGRAGRDGKPAFSLLFYSDHDLSSRQYILAKGLDEGEREGGRGESKEKEVERKGEELMKVREYALEGGGCWRRKLLAYFGE 518 ++++LR FG +FR+ Q+D I VL G L PTGGGKS+CYQ+PAL G+ +V+SPLI+LM++QV LQ +G+ A SS Q + +L + KP +++LY+TPE ++P F L+++H+RGLL A+DEAHCIS WGHDFRP+YR+L +R P VP LALTATA P VQ+D+ L L +V K SF+RPNLFY V YK LL D + L S +K+ G+ AIVYC + CD L+A L+ GI AYH + D R V + +VV A+ AFGMGID+ DVRLV H+ +P ++EAFYQESGRAGRD P+ SLL+Y D ++IL+K + + ++E+ ++ + ++ +Y EG GC R+K+L FGE Sbjct: 26 LVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLQEKGIAAEFLSSTQTMQVKTKIYEDLDS-GKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSVLKA-----------NGDT---------------------------------------------------------------------------------CAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQS---FSTRERSSKKSISDFSQMVDYC-EGSGCRRKKILESFGE 422
BLAST of NO10G01370 vs. NCBI_GenBank
Match: XP_006467041.1 (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X2 [Citrus sinensis]) HSP 1 Score: 307.0 bits (785), Expect = 1.800e-79 Identity = 183/494 (37.04%), Postives = 255/494 (51.62%), Query Frame = 0 Query: 24 MLQVLRSTFGLNEFREMQMDVISHVLHGGSGLVLFPTGGGKSLCYQLPALLSDGVTIVISPLISLMQDQVTALQARGVKARNFSSAQDASTINQTLAELAALPKPHVKILYITPERLSSPSFAPILQQLHARGLLAAFAVDEAHCISQWGHDFRPAYRQLGMIRAAFPSVPCLALTATATPSVQRDIQMQLSLPPSVVFKRSFDRPNLFYRVEYKSLLRDIHGVLASAIKSEIGPFVCQATKKGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNSFFQSRIGAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAIVYCWKTADCDLLAAELTKRGIPTLAYHGKMKDGQRKEVQGLFSEGLVKVVTASCAFGMGIDKADVRLVVHWTVPNTLEAFYQESGRAGRDGKPAFSLLFYSDHDLSSRQYILAKGLDEGEREGGRGESKEKEVERKGEELMKVREYALEGGGCWRRKLLAYFGE 518 ++++LR FG +FR+ Q+D I VL G L PTGGGKS+CYQ+PAL G+ +V+SPLI+LM++QV LQ +G+ A SS Q + +L + KP +++LY+TPE ++P F L+++H+RGLL A+DEAHCIS WGHDFRP+YR+L +R P VP LALTATA P VQ+D+ L L +V K SF+RPNLFY V YK LL D + L S +K+ G+ AIVYC + CD L+A L+ GI AYH + D R V + +VV A+ AFGMGID+ DVRLV H+ +P ++EAFYQESGRAGRD P+ SLL+Y D ++IL+K + + ++E+ ++ + ++ +Y EG GC R+K+L FGE Sbjct: 26 LVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLQEKGIAAEFLSSTQTMQVKTKIYEDLDS-GKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSVLKA-----------NGDT---------------------------------------------------------------------------------CAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQS---FSTRERSSKKSISDFSQMVDYC-EGSGCRRKKILESFGE 422
BLAST of NO10G01370 vs. NCBI_GenBank
Match: XP_012065338.1 (ATP-dependent DNA helicase Q-like 3 isoform X1 [Jatropha curcas]) HSP 1 Score: 306.6 bits (784), Expect = 2.400e-79 Identity = 179/494 (36.23%), Postives = 259/494 (52.43%), Query Frame = 0 Query: 24 MLQVLRSTFGLNEFREMQMDVISHVLHGGSGLVLFPTGGGKSLCYQLPALLSDGVTIVISPLISLMQDQVTALQARGVKARNFSSAQDASTINQTLAELAALPKPHVKILYITPERLSSPSFAPILQQLHARGLLAAFAVDEAHCISQWGHDFRPAYRQLGMIRAAFPSVPCLALTATATPSVQRDIQMQLSLPPSVVFKRSFDRPNLFYRVEYKSLLRDIHGVLASAIKSEIGPFVCQATKKGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNSFFQSRIGAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAIVYCWKTADCDLLAAELTKRGIPTLAYHGKMKDGQRKEVQGLFSEGLVKVVTASCAFGMGIDKADVRLVVHWTVPNTLEAFYQESGRAGRDGKPAFSLLFYSDHDLSSRQYILAKGLDEGEREGGRGESKEKEVERKGEELMKVREYALEGGGCWRRKLLAYFGE 518 ++++LR FG ++FR Q++ I VL G L PTGGGKS+CYQ+PAL G+ +V+SPLI+LM++QV AL+ +G+ A SS Q + N+ +L + KP V++LY+TPE +++ F L ++HARG L A+DEAHCIS WGHDFRP+YR+L ++ P +P LALTATA+P VQRD+ L L ++ K SF+RPN++Y V YK LL D + L+S +KS VC AI+YC + CD L+A L++ GI + AYH + + R V + ++VV A+ AFGMGID+ DVR+V H+ +P ++EAFYQESGRAGRD P SLL+Y D ++IL G ++ S+++ ++ + ++ EY EG GC R+K+L FGE Sbjct: 24 LVKLLRWHFGYSDFRAKQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEFLSSTQTSQVKNKIHEDLDS-GKPSVRLLYVTPELIATAGFMSKLTKIHARGFLNLIAIDEAHCISSWGHDFRPSYRKLSTLKNRLPDIPTLALTATASPEVQRDVIESLCLQDPLILKSSFNRPNIYYEVRYKDLLDDAYADLSSVLKS--SGDVC------------------------------------------------------------------------------------------AIIYCLERTTCDGLSAHLSQNGISSSAYHAGLNNKLRTTVLDDWISSKIQVVVATVAFGMGIDRKDVRMVCHFNIPKSMEAFYQESGRAGRDQLPCKSLLYYGVDDRKRMEFILRTA---GSKKSQTSSSQDESSKKSLSDFSQMVEYC-EGSGCRRKKILESFGE 420
BLAST of NO10G01370 vs. NCBI_GenBank
Match: XP_024036410.1 (ATP-dependent DNA helicase Q-like 3 isoform X3 [Citrus clementina]) HSP 1 Score: 306.6 bits (784), Expect = 2.400e-79 Identity = 182/494 (36.84%), Postives = 256/494 (51.82%), Query Frame = 0 Query: 24 MLQVLRSTFGLNEFREMQMDVISHVLHGGSGLVLFPTGGGKSLCYQLPALLSDGVTIVISPLISLMQDQVTALQARGVKARNFSSAQDASTINQTLAELAALPKPHVKILYITPERLSSPSFAPILQQLHARGLLAAFAVDEAHCISQWGHDFRPAYRQLGMIRAAFPSVPCLALTATATPSVQRDIQMQLSLPPSVVFKRSFDRPNLFYRVEYKSLLRDIHGVLASAIKSEIGPFVCQATKKGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNSFFQSRIGAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAIVYCWKTADCDLLAAELTKRGIPTLAYHGKMKDGQRKEVQGLFSEGLVKVVTASCAFGMGIDKADVRLVVHWTVPNTLEAFYQESGRAGRDGKPAFSLLFYSDHDLSSRQYILAKGLDEGEREGGRGESKEKEVERKGEELMKVREYALEGGGCWRRKLLAYFGE 518 ++++LR FG +FR+ Q+D I VL G L PTGGGKS+CYQ+PAL G+ +V+SPLI+LM++QV L+ +G+ A SS Q + +L + KP +++LY+TPE ++P F L+++H+RGLL A+DEAHCIS WGHDFRP+YR+L +R P VP LALTATA P VQ+D+ + L L +V K SF+RPNLFY V YK LL D + L S +K+ G+ AIVYC + CD L+A L+ GI AYH + D R V + +VV A+ AFGMGID+ DVRLV H+ +P ++EAFYQESGRAGRD P+ SLL+Y D ++IL+K + + ++E+ ++ + ++ +Y EG GC R+K+L FGE Sbjct: 26 LVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAAEFLSSTQTMQVKTKIYEDLDS-GKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMVSLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSVLKA-----------NGDT---------------------------------------------------------------------------------CAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQS---FSTRERSSKKSISDFSQMVDYC-EGSGCRRKKILESFGE 422
BLAST of NO10G01370 vs. NCBI_GenBank
Match: XP_024036411.1 (ATP-dependent DNA helicase Q-like 3 isoform X4 [Citrus clementina]) HSP 1 Score: 306.6 bits (784), Expect = 2.400e-79 Identity = 182/494 (36.84%), Postives = 256/494 (51.82%), Query Frame = 0 Query: 24 MLQVLRSTFGLNEFREMQMDVISHVLHGGSGLVLFPTGGGKSLCYQLPALLSDGVTIVISPLISLMQDQVTALQARGVKARNFSSAQDASTINQTLAELAALPKPHVKILYITPERLSSPSFAPILQQLHARGLLAAFAVDEAHCISQWGHDFRPAYRQLGMIRAAFPSVPCLALTATATPSVQRDIQMQLSLPPSVVFKRSFDRPNLFYRVEYKSLLRDIHGVLASAIKSEIGPFVCQATKKGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNSFFQSRIGAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAIVYCWKTADCDLLAAELTKRGIPTLAYHGKMKDGQRKEVQGLFSEGLVKVVTASCAFGMGIDKADVRLVVHWTVPNTLEAFYQESGRAGRDGKPAFSLLFYSDHDLSSRQYILAKGLDEGEREGGRGESKEKEVERKGEELMKVREYALEGGGCWRRKLLAYFGE 518 ++++LR FG +FR+ Q+D I VL G L PTGGGKS+CYQ+PAL G+ +V+SPLI+LM++QV L+ +G+ A SS Q + +L + KP +++LY+TPE ++P F L+++H+RGLL A+DEAHCIS WGHDFRP+YR+L +R P VP LALTATA P VQ+D+ + L L +V K SF+RPNLFY V YK LL D + L S +K+ G+ AIVYC + CD L+A L+ GI AYH + D R V + +VV A+ AFGMGID+ DVRLV H+ +P ++EAFYQESGRAGRD P+ SLL+Y D ++IL+K + + ++E+ ++ + ++ +Y EG GC R+K+L FGE Sbjct: 26 LVKLLRWHFGHAQFRDKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVIGLKEKGIAAEFLSSTQTMQVKTKIYEDLDS-GKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMVSLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSVLKA-----------NGDT---------------------------------------------------------------------------------CAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQS---FSTRERSSKKSISDFSQMVDYC-EGSGCRRKKILESFGE 422
BLAST of NO10G01370 vs. NCBI_GenBank
Match: XP_006383035.1 (ATP-dependent DNA helicase Q-like 3 isoform X6 [Populus trichocarpa] >PNT36091.1 hypothetical protein POPTR_005G107400v3 [Populus trichocarpa]) HSP 1 Score: 305.8 bits (782), Expect = 4.100e-79 Identity = 189/518 (36.49%), Postives = 266/518 (51.35%), Query Frame = 0 Query: 5 LEPTPPPTARATSSAMETQ-----MLQVLRSTFGLNEFREMQMDVISHVLHGGSGLVLFPTGGGKSLCYQLPALLSDGVTIVISPLISLMQDQVTALQARGVKARNFSSAQDASTINQTLAELAALPKPHVKILYITPERLSSPSFAPILQQLHARGLLAAFAVDEAHCISQWGHDFRPAYRQLGMIRAAFPSVPCLALTATATPSVQRDIQMQLSLPPSVVFKRSFDRPNLFYRVEYKSLLRDIHGVLASAIKSEIGPFVCQATKKGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNSFFQSRIGAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAIVYCWKTADCDLLAAELTKRGIPTLAYHGKMKDGQRKEVQGLFSEGLVKVVTASCAFGMGIDKADVRLVVHWTVPNTLEAFYQESGRAGRDGKPAFSLLFYSDHDLSSRQYILAKGLDEGEREGGRGESKEKEVERKGEELMKVREYALEGGGCWRRKLLAYFGE 518 ++ +P P + TSS E + ++++LR FG +FR Q++ I VL G L PTGGGKS+CYQ+PAL G+ +V+SPLI+LM++QV AL+ +G+ A SS Q +S N+ +L + KP V++LY+TPE +++P F L ++H RGLL A+DEAHCIS WGHDFRP+YR+L +R P VP LALTATA P VQ D+ L L +V SF+RPN++Y V YK LL D + L+S +KS G +C AIVYC + CD L+A L+K GI + AYH + + R V + ++VV A+ AFGMGID+ DVR+V H+ +P ++E+FYQESGRAGRD P+ SLL+Y D ++IL E + + S + E+ +K + EG GC R+K+L FGE Sbjct: 1 MKKSPLPMVQNTSSKDEKRTRKETLVKLLRWHFGYQDFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALAKRGIVLVVSPLIALMENQVMALKEKGIAAEFLSSTQTSSVRNKIHEDLDS-GKPSVRLLYVTPELIATPGFMSKLTKIHTRGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPVLALTATAAPKVQNDVIESLCLQDPLVLSSSFNRPNIYYEVRYKDLLDDAYADLSSVLKS-CGD-IC------------------------------------------------------------------------------------------AIVYCLERTTCDGLSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSLLYYGVDDHKKMEFILR----NAENKKLQSSSSKGELSKKSLTDFNLMIEYCEGSGCRRKKILESFGE 421
BLAST of NO10G01370 vs. NCBI_GenBank
Match: XP_024457273.1 (ATP-dependent DNA helicase Q-like 3 isoform X5 [Populus trichocarpa]) HSP 1 Score: 305.8 bits (782), Expect = 4.100e-79 Identity = 189/518 (36.49%), Postives = 266/518 (51.35%), Query Frame = 0 Query: 5 LEPTPPPTARATSSAMETQ-----MLQVLRSTFGLNEFREMQMDVISHVLHGGSGLVLFPTGGGKSLCYQLPALLSDGVTIVISPLISLMQDQVTALQARGVKARNFSSAQDASTINQTLAELAALPKPHVKILYITPERLSSPSFAPILQQLHARGLLAAFAVDEAHCISQWGHDFRPAYRQLGMIRAAFPSVPCLALTATATPSVQRDIQMQLSLPPSVVFKRSFDRPNLFYRVEYKSLLRDIHGVLASAIKSEIGPFVCQATKKGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNSFFQSRIGAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAIVYCWKTADCDLLAAELTKRGIPTLAYHGKMKDGQRKEVQGLFSEGLVKVVTASCAFGMGIDKADVRLVVHWTVPNTLEAFYQESGRAGRDGKPAFSLLFYSDHDLSSRQYILAKGLDEGEREGGRGESKEKEVERKGEELMKVREYALEGGGCWRRKLLAYFGE 518 ++ +P P + TSS E + ++++LR FG +FR Q++ I VL G L PTGGGKS+CYQ+PAL G+ +V+SPLI+LM++QV AL+ +G+ A SS Q +S N+ +L + KP V++LY+TPE +++P F L ++H RGLL A+DEAHCIS WGHDFRP+YR+L +R P VP LALTATA P VQ D+ L L +V SF+RPN++Y V YK LL D + L+S +KS G +C AIVYC + CD L+A L+K GI + AYH + + R V + ++VV A+ AFGMGID+ DVR+V H+ +P ++E+FYQESGRAGRD P+ SLL+Y D ++IL E + + S + E+ +K + EG GC R+K+L FGE Sbjct: 1 MKKSPLPMVQNTSSKDEKRTRKETLVKLLRWHFGYQDFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALAKRGIVLVVSPLIALMENQVMALKEKGIAAEFLSSTQTSSVRNKIHEDLDS-GKPSVRLLYVTPELIATPGFMSKLTKIHTRGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPVLALTATAAPKVQNDVIESLCLQDPLVLSSSFNRPNIYYEVRYKDLLDDAYADLSSVLKS-CGD-IC------------------------------------------------------------------------------------------AIVYCLERTTCDGLSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSLLYYGVDDHKKMEFILR----NAENKKLQSSSSKGELSKKSLTDFNLMIEYCEGSGCRRKKILESFGE 421
BLAST of NO10G01370 vs. NCBI_GenBank
Match: XP_011022243.1 (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Populus euphratica] >XP_011022244.1 PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Populus euphratica]) HSP 1 Score: 305.4 bits (781), Expect = 5.400e-79 Identity = 190/518 (36.68%), Postives = 264/518 (50.97%), Query Frame = 0 Query: 5 LEPTPPPTARATSSAMETQ-----MLQVLRSTFGLNEFREMQMDVISHVLHGGSGLVLFPTGGGKSLCYQLPALLSDGVTIVISPLISLMQDQVTALQARGVKARNFSSAQDASTINQTLAELAALPKPHVKILYITPERLSSPSFAPILQQLHARGLLAAFAVDEAHCISQWGHDFRPAYRQLGMIRAAFPSVPCLALTATATPSVQRDIQMQLSLPPSVVFKRSFDRPNLFYRVEYKSLLRDIHGVLASAIKSEIGPFVCQATKKGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNSFFQSRIGAPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAIVYCWKTADCDLLAAELTKRGIPTLAYHGKMKDGQRKEVQGLFSEGLVKVVTASCAFGMGIDKADVRLVVHWTVPNTLEAFYQESGRAGRDGKPAFSLLFYSDHDLSSRQYILAKGLDEGEREGGRGESKEKEVERKGEELMKVREYALEGGGCWRRKLLAYFGE 518 + +P P + TSS E + ++++LR FG +FR Q++ I VL G L PTGGGKS+CYQ+PAL G+ +V+SPLI+LM++QV AL+ +G+ A SS Q +S N+ +L + KP V++LY+TPE +++P F L ++H RGL A+DEAHCIS WGHDFRP+YR+L +R P VP LALTATA P VQ D+ L L +V K SF+RPN++Y V K LL D + L+S +KS G VC AIVYC + CD L+A L+K GI + AYH + + R V + ++VV A+ AFGMGID+ DVR+V H+ +P ++E+FYQESGRAGRD P+ SLL+Y D ++IL E + + S E E+ +K + EG GC R+K+L FGE Sbjct: 1 MRKSPLPMVQNTSSMDEKRTRKETLVKLLRWHFGYQDFRGKQLEAIEAVLSGRDCFCLMPTGGGKSMCYQIPALAKHGIVLVVSPLIALMENQVMALKEKGIAAEFLSSTQTSSVRNKIHEDLDS-GKPSVRLLYVTPELIATPGFMSKLTKIHTRGLFNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPVLALTATAAPKVQNDVIKSLCLQDPLVLKSSFNRPNIYYEVRCKDLLDDAYADLSSVLKS-CGD-VC------------------------------------------------------------------------------------------AIVYCLERTTCDGLSAHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSLLYYGVDDRKKMEFILR----NAENKKLQSSSSEGELSKKSLTDFNLMIEYCEGSGCRRKKILESFGE 421 The following BLAST results are available for this feature:
BLAST of NO10G01370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G01370 ID=NO10G01370|Name=NO10G01370|organism=Nannochloropsis oceanica|type=gene|length=3164bpback to top protein sequence of NO10G01370.1 >NO10G01370.1-protein ID=NO10G01370.1-protein|Name=NO10G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=854bpback to top Synonyms
Publications
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