NO10G01150, NO10G01150 (gene) Nannochloropsis oceanica

Overview
NameNO10G01150
Unique NameNO10G01150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1972
Alignment locationchr10:344940..346911 -

Link to JBrowse

Properties
Property NameValue
DescriptionGtp-binding protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:344940..346911 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR030394G_HFLX_dom
IPR016496GTPase_HflX
IPR032305GTP-bd_M
IPR025121GTPase_HflX_N_dom
IPR006073GTP_binding_domain
Homology
BLAST of NO10G01150 vs. NCBI_GenBank
Match: EWM25385.1 (gtp-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 529.6 bits (1363), Expect = 1.100e-146
Identity = 286/397 (72.04%), Postives = 330/397 (83.12%), Query Frame = 0
Query:   98 STAQPNCVVLHITPPRSNHEDRAQEGYALQEACALAQTLGYAVPMYETLRLRAIHPKTYIGKGKVVELRGMLRAVDANALFINTARLTALQQKNISELCQVNEVKDRISVILEIFSKRARTTEAKVQVELAQCKYALSHLVRGAAAAYEQQRGASGTGFMAGGGEKALEIQRRLLRQQVKFLQGKLRVVEKRRTEQRKHRQQPSVSLVGYTNVGKSSLLNALTRSESVTVEDRPFETLDTTTRSLFLPSLDTPTLLIDTVGFISQLPLELVASFRATLEEVVAADLLLHVRDASTIGTPLFEAQRRSVDKVLGEIGTHEHLSKSVIEVWNKIDLLETEEQKEMLRMVREAREGGREEGGPPPKCVVLVSARMKEGLNELIRVVGERLVEGGHVKVRE 495
            S   PNC+VLHITPPRS  EDR QE   L EACALAQTLGYAVP+ E LRLRAIHPKT+IGKGKVVELRG+LRA DA  LFINT RLTALQQ+N+ ELCQ   VKDRISVIL+IF +RART EAK+QVELAQCKYALSHLVRGA+A YEQQRGASGTGFMAGGGEKALE++RR LR+Q K LQ KL+ VEKRR EQRKHR+QP+VSL+GYTNVGKSSLLNALT S +V+VEDRPFETLDTTTR+LFLPS+    LL DTVGFI QLPLELVA+FRATLEE V+ADLLLHVRDAST+GTPLF  Q  SVDK+L ++GT EHL  SV+EVWNK+DLL  +++ +M R++  A+   RE   P    VVLVSA+ KEG+ EL+R++G+RLVEGG ++  E
Sbjct:   62 SAPVPNCIVLHITPPRSTLEDRLQEEDFLDEACALAQTLGYAVPVREILRLRAIHPKTFIGKGKVVELRGLLRATDA-ILFINTPRLTALQQRNLKELCQTEGVKDRISVILDIFGQRARTMEAKLQVELAQCKYALSHLVRGASAGYEQQRGASGTGFMAGGGEKALELRRRQLREQSKVLQHKLKTVEKRRMEQRKHRRQPTVSLLGYTNVGKSSLLNALTHSHAVSVEDRPFETLDTTTRALFLPSVGASALLTDTVGFIRQLPLELVAAFRATLEEAVSADLLLHVRDASTLGTPLFAEQYASVDKILRDVGTPEHLKHSVVEVWNKVDLLTNKQRDQMARVLAGAK---REASSPD---VVLVSAQTKEGMRELVRMIGDRLVEGGFLQPAE 451          
BLAST of NO10G01150 vs. NCBI_GenBank
Match: WP_091746602.1 (GTPase HflX [Brevundimonas sp. 374] >SDQ17689.1 GTP-binding protein HflX [Brevundimonas sp. 374])

HSP 1 Score: 237.3 bits (604), Expect = 1.100e-58
Identity = 170/379 (44.85%), Postives = 227/379 (59.89%), Query Frame = 0
Query:  105 VVLHITPPRSNHEDRAQEGYALQEACALAQTLGYAVPMYETLRLRAIHPKTYIGKGKVVELRGMLRAVDANALFINTARLTALQQKNISELCQVNEVKDRISVILEIFSKRARTTEAKVQVELAQCKYALSHLVRGAAAAYEQQRGASGTGFMAGGGEKALEIQRRLLRQQVKFLQGKLRVVEKRRTEQRKHRQQ---PSVSLVGYTNVGKSSLLNALTRSESVTVEDRPFETLDTTTRSLFLPSLDTPTLLIDTVGFISQLPLELVASFRATLEEVVAADLLLHVRDASTIGTPLFEAQRRSVDKVLGEIGTHEHLSKSVIEVWNKIDLLETEEQKEMLRMVREAREGGREEGGPPPKCVVLVSARMKEGLNELIRVV 481
            VV+H  P R +   R      L+EA  LA+ L   V   E +RLR+  P T  G GKV EL  ++RA DA A+ I+ A LT +QQ+N+ +  +V +V DR  +ILEIF +RART E ++QVELA+  Y  S LVR      E+QRG  GTG   G GE  +E+ RRL+  ++  L+ +L  V + R   RK RQ+   P+++LVGYTN GKS+L N LT SE V  +D  F TLDTT R++ LP    P ++ DTVGFIS LP ELV SFRATLEEV  ADL+LHVRD   I +P   AQ + V+ VL +I T E  ++ V+EVWNKIDLL+ E ++ +L       + G           V VSA   EG+  L +++
Sbjct:   16 VVIH--PDRRSDSPRL-ASERLEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDA-LTPVQQRNLEKAWEV-KVIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVR-TWTHLERQRG--GTGSTGGPGETQIELDRRLIADRIVRLKSELEEVRRTRALHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEARETVLGQAERLAKDGE---------AVAVSAWTGEGIEPLRQII 372          
BLAST of NO10G01150 vs. NCBI_GenBank
Match: WP_039243657.1 (GTPase HflX [Brevundimonas nasdae] >KIC61071.1 GTPase HflX [Brevundimonas nasdae])

HSP 1 Score: 236.5 bits (602), Expect = 2.000e-58
Identity = 170/379 (44.85%), Postives = 227/379 (59.89%), Query Frame = 0
Query:  105 VVLHITPPRSNHEDRAQEGYALQEACALAQTLGYAVPMYETLRLRAIHPKTYIGKGKVVELRGMLRAVDANALFINTARLTALQQKNISELCQVNEVKDRISVILEIFSKRARTTEAKVQVELAQCKYALSHLVRGAAAAYEQQRGASGTGFMAGGGEKALEIQRRLLRQQVKFLQGKLRVVEKRRTEQRKHRQQ---PSVSLVGYTNVGKSSLLNALTRSESVTVEDRPFETLDTTTRSLFLPSLDTPTLLIDTVGFISQLPLELVASFRATLEEVVAADLLLHVRDASTIGTPLFEAQRRSVDKVLGEIGTHEHLSKSVIEVWNKIDLLETEEQKEMLRMVREAREGGREEGGPPPKCVVLVSARMKEGLNELIRVV 481
            VV+H  P R +   R      L+EA  LA+ L   V   E +RLR+  P T  G GKV EL  ++RA DA A+ I+ A LT +QQ+N+ +  +V +V DR  +ILEIF +RART E ++QVELA+  Y  S LVR      E+QRG  GTG   G GE  +E+ RRL+  ++  L+ +L  V + R   RK RQ+   P+++LVGYTN GKS+L N LT SE V  +D  F TLDTT R++ LP    P ++ DTVGFIS LP ELV SFRATLEEV  ADL+LHVRD   I +P   AQ + V+ VL +I T E  ++ V+EVWNKIDLL+ E ++ +L       + G           V VSA   EG+  L +++
Sbjct:   16 VVIH--PDRRSDSPRL-ASERLEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDA-LTPVQQRNLEKAWEV-KVIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVR-TWTHLERQRG--GTGSTGGPGETQIELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEARETVLGQAERLAKDGE---------AVAVSAWTGEGIEPLRQII 372          
BLAST of NO10G01150 vs. NCBI_GenBank
Match: WP_045810777.1 (GTPase HflX [Brevundimonas sp. KM4] >KJV41619.1 GTPase HflX [Brevundimonas sp. KM4])

HSP 1 Score: 236.5 bits (602), Expect = 2.000e-58
Identity = 170/379 (44.85%), Postives = 227/379 (59.89%), Query Frame = 0
Query:  105 VVLHITPPRSNHEDRAQEGYALQEACALAQTLGYAVPMYETLRLRAIHPKTYIGKGKVVELRGMLRAVDANALFINTARLTALQQKNISELCQVNEVKDRISVILEIFSKRARTTEAKVQVELAQCKYALSHLVRGAAAAYEQQRGASGTGFMAGGGEKALEIQRRLLRQQVKFLQGKLRVVEKRRTEQRKHRQQ---PSVSLVGYTNVGKSSLLNALTRSESVTVEDRPFETLDTTTRSLFLPSLDTPTLLIDTVGFISQLPLELVASFRATLEEVVAADLLLHVRDASTIGTPLFEAQRRSVDKVLGEIGTHEHLSKSVIEVWNKIDLLETEEQKEMLRMVREAREGGREEGGPPPKCVVLVSARMKEGLNELIRVV 481
            VV+H  P R +   R      L+EA  LA+ L   V   E +RLR+  P T  G GKV EL  ++RA DA A+ I+ A LT +QQ+N+ +  +V +V DR  +ILEIF +RART E ++QVELA+  Y  S LVR      E+QRG  GTG   G GE  +E+ RRL+  ++  L+ +L  V + R   RK RQ+   P+++LVGYTN GKS+L N LT SE V  +D  F TLDTT R++ LP    P ++ DTVGFIS LP ELV SFRATLEEV  ADL+LHVRD   I +P   AQ + V+ VL +I T E  ++ V+EVWNKIDLL+ E ++ +L       + G           V VSA   EG+  L +++
Sbjct:   16 VVIH--PDRRSDSPRL-ASERLEEAAGLARALDLNVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDA-LTPVQQRNLEKAWEV-KVIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVR-TWTHLERQRG--GTGSTGGPGETQIELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEARETVLGQAERLAKDGE---------AVAVSAWTGEGIEPLRQII 372          
BLAST of NO10G01150 vs. NCBI_GenBank
Match: WP_055753767.1 (GTPase HflX [Brevundimonas sp. Leaf280] >KQP46735.1 GTPase HflX [Brevundimonas sp. Leaf280])

HSP 1 Score: 236.5 bits (602), Expect = 2.000e-58
Identity = 170/379 (44.85%), Postives = 227/379 (59.89%), Query Frame = 0
Query:  105 VVLHITPPRSNHEDRAQEGYALQEACALAQTLGYAVPMYETLRLRAIHPKTYIGKGKVVELRGMLRAVDANALFINTARLTALQQKNISELCQVNEVKDRISVILEIFSKRARTTEAKVQVELAQCKYALSHLVRGAAAAYEQQRGASGTGFMAGGGEKALEIQRRLLRQQVKFLQGKLRVVEKRRTEQRKHRQQ---PSVSLVGYTNVGKSSLLNALTRSESVTVEDRPFETLDTTTRSLFLPSLDTPTLLIDTVGFISQLPLELVASFRATLEEVVAADLLLHVRDASTIGTPLFEAQRRSVDKVLGEIGTHEHLSKSVIEVWNKIDLLETEEQKEMLRMVREAREGGREEGGPPPKCVVLVSARMKEGLNELIRVV 481
            VV+H  P R +   R      L+EA  LA+ L   V   E +RLR+  P T  G GKV EL  ++RA DA A+ I+ A LT +QQ+N+ +  +V +V DR  +ILEIF +RART E ++QVELA+  Y  S LVR      E+QRG  GTG   G GE  +E+ RRL+  ++  L+ +L  V + R   RK RQ+   P+++LVGYTN GKS+L N LT SE V  +D  F TLDTT R++ LP    P ++ DTVGFIS LP ELV SFRATLEEV  ADL+LHVRD   I +P   AQ + V+ VL +I T E  ++ V+EVWNKIDLL+ E ++ +L       + G           V VSA   EG+  L +++
Sbjct:   16 VVIH--PDRRSDSPRL-ASERLEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDA-LTPVQQRNLEKAWEV-KVIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVR-TWTHLERQRG--GTGSTGGPGETQIELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEARETVLGQAERLAKDGE---------AVAVSAWTGEGIEPLRQII 372          
BLAST of NO10G01150 vs. NCBI_GenBank
Match: WP_066624741.1 (GTPase HflX [Brevundimonas vesicularis] >ASE40890.1 GTPase HflX [Brevundimonas vesicularis])

HSP 1 Score: 236.5 bits (602), Expect = 2.000e-58
Identity = 170/379 (44.85%), Postives = 227/379 (59.89%), Query Frame = 0
Query:  105 VVLHITPPRSNHEDRAQEGYALQEACALAQTLGYAVPMYETLRLRAIHPKTYIGKGKVVELRGMLRAVDANALFINTARLTALQQKNISELCQVNEVKDRISVILEIFSKRARTTEAKVQVELAQCKYALSHLVRGAAAAYEQQRGASGTGFMAGGGEKALEIQRRLLRQQVKFLQGKLRVVEKRRTEQRKHRQQ---PSVSLVGYTNVGKSSLLNALTRSESVTVEDRPFETLDTTTRSLFLPSLDTPTLLIDTVGFISQLPLELVASFRATLEEVVAADLLLHVRDASTIGTPLFEAQRRSVDKVLGEIGTHEHLSKSVIEVWNKIDLLETEEQKEMLRMVREAREGGREEGGPPPKCVVLVSARMKEGLNELIRVV 481
            VV+H  P R +   R      L+EA  LA+ L   V   E +RLR+  P T  G GKV EL  ++RA DA A+ I+ A LT +QQ+N+ +  +V +V DR  +ILEIF +RART E ++QVELA+  Y  S LVR      E+QRG  GTG   G GE  +E+ RRL+  ++  L+ +L  V + R   RK RQ+   P+++LVGYTN GKS+L N LT SE V  +D  F TLDTT R++ LP    P ++ DTVGFIS LP ELV SFRATLEEV  ADL+LHVRD   I +P   AQ + V+ VL +I T E  ++ V+EVWNKIDLL+ E ++ +L       + G           V VSA   EG+  L +++
Sbjct:   16 VVIH--PDRRSDSPRL-ASERLEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDA-LTPVQQRNLEKAWEV-KVIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVR-TWTHLERQRG--GTGSTGGPGETQIELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEARETVLGQAERLAKDGE---------AVAVSAWTGEGIEPLRQII 372          
BLAST of NO10G01150 vs. NCBI_GenBank
Match: WP_024352852.1 (GTPase HflX [Brevundimonas naejangsanensis])

HSP 1 Score: 236.1 bits (601), Expect = 2.600e-58
Identity = 166/376 (44.15%), Postives = 229/376 (60.90%), Query Frame = 0
Query:  105 VVLHITPPRSNHEDRAQEGYALQEACALAQTLGYAVPMYETLRLRAIHPKTYIGKGKVVELRGMLRAVDANALFINTARLTALQQKNISELCQVNEVKDRISVILEIFSKRARTTEAKVQVELAQCKYALSHLVRGAAAAYEQQRGASGTGFMAGGGEKALEIQRRLLRQQVKFLQGKLRVVEKRRTEQRKHRQQ---PSVSLVGYTNVGKSSLLNALTRSESVTVEDRPFETLDTTTRSLFLPSLDTPTLLIDTVGFISQLPLELVASFRATLEEVVAADLLLHVRDASTIGTPLFEAQRRSVDKVLGEIGTHEHLSKSVIEVWNKIDLLETEEQKEML-RMVREAREGGREEGGPPPKCVVLVSARMKEGLNEL 477
            VV+H   P    ++       L+EA  LAQ L   V   E +RLR++ P T IG+GK+ E+  ++ A DA A+ ++  +LT +QQ+N+     + +V DR  +ILEIF +RART E ++QVELA+ +Y  S LVR      E+QRG  GTG + G GE  +E+ RR++  ++  L+ +L  V + R   RK R+Q   PSV+LVGYTN GKS+L N LT +E V  +D  F TLDTT R++ LP    P ++ DTVGF+S LP ELV SFRATLEEV  ADL+LHVRD   I +P   AQ + V+ VL +I T E  ++ ++EVWNKIDLLE E ++ ++ +  R AREG            V VSA   EG+  L
Sbjct:   16 VVIH---PDRRGDNARHASERLEEAVGLAQALDLDVRAQEIVRLRSVTPATLIGRGKLEEISALILAADAEAVVVDD-QLTPVQQRNLERFWDI-KVIDRTGLILEIFGRRARTREGRLQVELARLEYERSRLVR-TWTHLERQRG--GTGGVGGPGETQIELDRRMIADRIVRLKAELEEVRRTRGLHRKARKQVPFPSVALVGYTNAGKSTLFNRLTGAE-VMAKDLLFATLDTTQRTIRLPQ-GRPAIIADTVGFVSDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVETVLEQIPTPEGKTRRILEVWNKIDLLEPETREAVVGQAERLAREG----------TAVAVSAWTGEGIEAL 368          
BLAST of NO10G01150 vs. NCBI_GenBank
Match: WP_025976990.1 (GTPase HflX [Brevundimonas naejangsanensis] >ANF54310.1 GTPase HflX [Brevundimonas naejangsanensis])

HSP 1 Score: 236.1 bits (601), Expect = 2.600e-58
Identity = 166/376 (44.15%), Postives = 229/376 (60.90%), Query Frame = 0
Query:  105 VVLHITPPRSNHEDRAQEGYALQEACALAQTLGYAVPMYETLRLRAIHPKTYIGKGKVVELRGMLRAVDANALFINTARLTALQQKNISELCQVNEVKDRISVILEIFSKRARTTEAKVQVELAQCKYALSHLVRGAAAAYEQQRGASGTGFMAGGGEKALEIQRRLLRQQVKFLQGKLRVVEKRRTEQRKHRQQ---PSVSLVGYTNVGKSSLLNALTRSESVTVEDRPFETLDTTTRSLFLPSLDTPTLLIDTVGFISQLPLELVASFRATLEEVVAADLLLHVRDASTIGTPLFEAQRRSVDKVLGEIGTHEHLSKSVIEVWNKIDLLETEEQKEML-RMVREAREGGREEGGPPPKCVVLVSARMKEGLNEL 477
            VV+H   P    ++       L+EA  LAQ L   V   E +RLR++ P T IG+GK+ E+  ++ A DA A+ ++  +LT +QQ+N+     + +V DR  +ILEIF +RART E ++QVELA+ +Y  S LVR      E+QRG  GTG + G GE  +E+ RR++  ++  L+ +L  V + R   RK R+Q   PSV+LVGYTN GKS+L N LT +E V  +D  F TLDTT R++ LP    P ++ DTVGF+S LP ELV SFRATLEEV  ADL+LHVRD   I +P   AQ + V+ VL +I T E  ++ ++EVWNKIDLLE E ++ ++ +  R AREG            V VSA   EG+  L
Sbjct:   16 VVIH---PDRRGDNARHASERLEEAVGLAQALDLDVRAQEIVRLRSVTPATLIGRGKLEEIAALILAADAEAVVVDD-QLTPVQQRNLERFWDI-KVIDRTGLILEIFGRRARTREGRLQVELARLEYERSRLVR-TWTHLERQRG--GTGGVGGPGETQIELDRRMIADRIVRLKAELEEVRRTRGLHRKARKQVPFPSVALVGYTNAGKSTLFNRLTGAE-VMAKDLLFATLDTTQRTIRLPQ-GRPAIIADTVGFVSDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVETVLEQIPTPEGKTRRILEVWNKIDLLEPETRETVVGQAERLAREGS----------AVAVSAWTGEGIEAL 368          
BLAST of NO10G01150 vs. NCBI_GenBank
Match: WP_066551408.1 (GTPase HflX [Brevundimonas sp. GW460-12-10-14-LB2] >ANC53042.1 GTPase HflX [Brevundimonas sp. GW460-12-10-14-LB2])

HSP 1 Score: 235.7 bits (600), Expect = 3.300e-58
Identity = 170/379 (44.85%), Postives = 226/379 (59.63%), Query Frame = 0
Query:  105 VVLHITPPRSNHEDRAQEGYALQEACALAQTLGYAVPMYETLRLRAIHPKTYIGKGKVVELRGMLRAVDANALFINTARLTALQQKNISELCQVNEVKDRISVILEIFSKRARTTEAKVQVELAQCKYALSHLVRGAAAAYEQQRGASGTGFMAGGGEKALEIQRRLLRQQVKFLQGKLRVVEKRRTEQRKHRQQ---PSVSLVGYTNVGKSSLLNALTRSESVTVEDRPFETLDTTTRSLFLPSLDTPTLLIDTVGFISQLPLELVASFRATLEEVVAADLLLHVRDASTIGTPLFEAQRRSVDKVLGEIGTHEHLSKSVIEVWNKIDLLETEEQKEMLRMVREAREGGREEGGPPPKCVVLVSARMKEGLNELIRVV 481
            VV+H  P R +   R      L+EA  LA+ L   V   E +RLR+  P T  G GKV EL  ++RA DA A+ I+ A LT +QQ+N+ +  +V +V DR  +ILEIF +RART E ++QVELA+  Y  S LVR      E+QRG  GTG   G GE  +E+ RRL+  ++  L+ +L  V + R   RK RQ+   P+++LVGYTN GKS+L N LT SE V  +D  F TLDTT R++ LP    P ++ DTVGFIS LP ELV SFRATLEEV  ADL+LHVRD   I +P   AQ + V+ VL  I T E  ++ V+EVWNKIDLL+ E ++ +L       + G           V VSA   EG+  L +++
Sbjct:   16 VVIH--PDRRSDSPRL-ASERLEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDA-LTPVQQRNLEKAWEV-KVIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVR-TWTHLERQRG--GTGSTGGPGETQIELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKHIETPEGKTRRVLEVWNKIDLLDDEARETVLGQAERLAKDGE---------AVAVSAWTGEGIEPLRQII 372          
BLAST of NO10G01150 vs. NCBI_GenBank
Match: WP_055805040.1 (GTPase HflX [Brevundimonas sp. Leaf168] >KQR61663.1 GTPase HflX [Brevundimonas sp. Leaf168])

HSP 1 Score: 235.3 bits (599), Expect = 4.400e-58
Identity = 170/379 (44.85%), Postives = 226/379 (59.63%), Query Frame = 0
Query:  105 VVLHITPPRSNHEDRAQEGYALQEACALAQTLGYAVPMYETLRLRAIHPKTYIGKGKVVELRGMLRAVDANALFINTARLTALQQKNISELCQVNEVKDRISVILEIFSKRARTTEAKVQVELAQCKYALSHLVRGAAAAYEQQRGASGTGFMAGGGEKALEIQRRLLRQQVKFLQGKLRVVEKRRTEQRKHRQQ---PSVSLVGYTNVGKSSLLNALTRSESVTVEDRPFETLDTTTRSLFLPSLDTPTLLIDTVGFISQLPLELVASFRATLEEVVAADLLLHVRDASTIGTPLFEAQRRSVDKVLGEIGTHEHLSKSVIEVWNKIDLLETEEQKEMLRMVREAREGGREEGGPPPKCVVLVSARMKEGLNELIRVV 481
            VV+H  P R +   R      L+EA  LA+ L   V   E +RLR+  P T  G GKV EL  ++RA DA A+ I+ A LT +QQ+N+ +  +V +V DR  +ILEIF +RART E ++QVELA+  Y  S LVR      E+QRG  GTG   G GE  +E+ RRL+  ++  L+ +L  V + R   RK RQ+   P+++LVGYTN GKS+L N LT SE V  +D  F TLDTT R++ LP    P ++ DTVGFIS LP ELV SFRATLEEV  ADL+LHVRD   I +P   AQ + V+ VL +I T E  ++ V+EVWNKIDLL+ E  + +L       + G           V VSA   EG+  L +++
Sbjct:   16 VVIH--PDRRSDSPRL-ASERLEEAAGLARALDLDVRAEEIVRLRSTTPATLFGTGKVEELAALVRAADAEAVIIDDA-LTPVQQRNLEKAWEV-KVIDRTGLILEIFGRRARTKEGRLQVELARLDYERSRLVR-TWTHLERQRG--GTGSTGGPGETQIELDRRLIADRIVRLKSELEEVRRTRGLHRKQRQKAPFPTIALVGYTNAGKSTLFNRLTGSE-VFAKDLLFATLDTTQRTIRLPQ-GRPAIVADTVGFISDLPHELVESFRATLEEVGEADLILHVRD---IASPDSAAQAKDVEAVLKQIETPEGKTRRVLEVWNKIDLLDDEAGETVLGQAERLAKDGE---------AVAVSAWTGEGIEPLRQII 372          
The following BLAST results are available for this feature:
BLAST of NO10G01150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25385.11.100e-14672.04gtp-binding protein [Nannochloropsis gaditana][more]
WP_091746602.11.100e-5844.85GTPase HflX [Brevundimonas sp. 374] >SDQ17689.1 GT... [more]
WP_039243657.12.000e-5844.85GTPase HflX [Brevundimonas nasdae] >KIC61071.1 GTP... [more]
WP_045810777.12.000e-5844.85GTPase HflX [Brevundimonas sp. KM4] >KJV41619.1 GT... [more]
WP_055753767.12.000e-5844.85GTPase HflX [Brevundimonas sp. Leaf280] >KQP46735.... [more]
WP_066624741.12.000e-5844.85GTPase HflX [Brevundimonas vesicularis] >ASE40890.... [more]
WP_024352852.12.600e-5844.15GTPase HflX [Brevundimonas naejangsanensis][more]
WP_025976990.12.600e-5844.15GTPase HflX [Brevundimonas naejangsanensis] >ANF54... [more]
WP_066551408.13.300e-5844.85GTPase HflX [Brevundimonas sp. GW460-12-10-14-LB2]... [more]
WP_055805040.14.400e-5844.85GTPase HflX [Brevundimonas sp. Leaf168] >KQR61663.... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000985NSK000985Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01150.1NO10G01150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554359gene_4102Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100005g135gene5157Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01150.1NO10G01150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01150 ID=NO10G01150|Name=NO10G01150|organism=Nannochloropsis oceanica|type=gene|length=1972bp
CAAGAATAAGTGGTGTGCGATGAGgtagggccatggttggaaacactgcg
tggtatgtggtgggtgatgtggcgggtgagtgtactctctctttatgtcg
aagctggaggaatgcatctctatcatcgtgtcttttttggtttcccttct
tgcccacgaaactcatttcacggcaaccacacaatccatttccatttaat
catggcgacagAGGGTTGTAGGCAAGCATGTGGTTGCGGGCAGCGCGGCG
TTGCCCATGGATGAGACAGTCATCATCATGGCCGTTGCCGCCTTCAACTG
GCGTATTCGCCACCCCAGCAGGACAGCACTCGCCCCAATCACGCTTGTCG
TCCGTAAAAATACGGGGCATCAGCACGCGACAGTCACAGCACCTTTACCT
CTCCTCATTCTTGGGACTCCGGCCATCGGCCTCGTTACGAACGTTACGAA
GAGCCGCCACGTCCCACCACTCCACTCATCGTCTTCAAACCATCCACCAC
TCAACCCAAGGCCCGACATCTACTGCCCAGCCCAACTGTGTCGTTCTTCA
TATTACCCCCCCTCGTTCCAACCACGAGGATCGAGCACAAGAGGGATACG
CCCTTCAAGAAGCCTGTGCCTTGGCTCAAACGCTGGGCTACGCTGTTCCA
ATGTACGAAACCCTACGTCTACGTGCCATCCATCCCAAGACGTACATTGG
CAAAGGCAAGGTGGTGGAGCTAAGAGGGATGTTGCGTGCAGTGGACGCAA
ATGCTTTGTTTATCAACACAGCACGCCTCACGGCTTTGCAGCAGAAAAAT
ATAAGCGAGCTCTGTCAAGTAAATGAAGTAAAGGACCGTATCAGCGTTAT
ACTTGAAATATTCTCAAAACGCGCGAGGACCACCGAGGCGAAAGTGCAGG
TAGAGCTGGCTCAATGCAAATATGCCCTCTCTCATCTCGTTCGAGGGGCC
GCGGCCGCGTATGAGCAGCAGAGAGGCGCGTCGGGCACTGGATTTATGGC
TGGTGGAGGCGAGAAGGCTTTAGAGATTCAACGACGATTGTTGCGACAAC
AGGTGAAGTTTCTGCAAGGTAAATTAAGGGTGGTCGAGAAGAGGAGGACA
GAGCAGAGGAAACATCGACAGCAACCAAGTGTGAGTTTGGTGGGGTATAC
AAACGTAGGCAAATCGTCTTTACTTAACGCTCTGACCCGTTCGGAGTCCG
TTACCGTTGAAGACCGACCATTCGAAACCCTCGATACTACCACCCGCTCC
CTCTTCCTTCCCTCCCTCGACACCCCTACTCTGTTGATCGACACAGTCGG
TTTTATTTCCCAACTTCCTTTGGAGCTCGTCGCTTCTTTTCGCGCCACGT
TGGAAGAAGTGGTGGCTGCTGACCTCTTGCTCCACGTGCGTGATGCCAGC
ACGATAGGCACACCTCTTTTCGAAGCACAGCGACGATCGGTTGACAAGGT
CTTGGGGGAGATAGGAACACATGAACATCTTAGTAAAAGTGTTATTGAGG
TGTGGAATAAAATTGACCTGCTCGAGACAGAAGAACAGAAGGAGATGCTT
CGGATGGTGAGGGAGGCAAGGGAGGGAGGGAGGGAGGAAGGGGGGCCGCC
ACCGAAGTGTGTTGTGCTGGTGTCTGCGCGGATGAAGGAGGGTTTGAATG
AGCTGATAAGGGTGGTGGGAGAGAGGTTGGTAGAAGGGGGGCATGTCAAG
GTCAGGGAAGAGGAGGAGAGGGAGGAGGCGGAGCAGGAGTCGATGCAGGG
AGAGAAGGAGTATGACGAGGAGGAGGAGATAAACAAGGAGAAGAAGACGG
CGGATAAAGAGAAAGGGGAGAAACAAATAACAAACAGGAAAGAAAAAGAA
AGTTTTGAACATACATGATTATACAGAGAAAAGCGCAAAGAAGTACCTTT
CTTGCCTCGGTCTGAGGAAGCACAGTCGCACGAACACGGGGCAAAAAGAA
AAACGAAAAGGAGGAGGCTCTC
back to top

protein sequence of NO10G01150.1

>NO10G01150.1-protein ID=NO10G01150.1-protein|Name=NO10G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=547bp
MWLRAARRCPWMRQSSSWPLPPSTGVFATPAGQHSPQSRLSSVKIRGIST
RQSQHLYLSSFLGLRPSASLRTLRRAATSHHSTHRLQTIHHSTQGPTSTA
QPNCVVLHITPPRSNHEDRAQEGYALQEACALAQTLGYAVPMYETLRLRA
IHPKTYIGKGKVVELRGMLRAVDANALFINTARLTALQQKNISELCQVNE
VKDRISVILEIFSKRARTTEAKVQVELAQCKYALSHLVRGAAAAYEQQRG
ASGTGFMAGGGEKALEIQRRLLRQQVKFLQGKLRVVEKRRTEQRKHRQQP
SVSLVGYTNVGKSSLLNALTRSESVTVEDRPFETLDTTTRSLFLPSLDTP
TLLIDTVGFISQLPLELVASFRATLEEVVAADLLLHVRDASTIGTPLFEA
QRRSVDKVLGEIGTHEHLSKSVIEVWNKIDLLETEEQKEMLRMVREAREG
GREEGGPPPKCVVLVSARMKEGLNELIRVVGERLVEGGHVKVREEEEREE
AEQESMQGEKEYDEEEEINKEKKTADKEKGEKQITNRKEKESFEHT*
back to top
Synonyms
Publications