NO10G00030, NO10G00030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO10G00030 vs. NCBI_GenBank
Match: OEU15250.1 (hypothetical protein FRACYDRAFT_208801 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 127.1 bits (318), Expect = 1.700e-25 Identity = 87/259 (33.59%), Postives = 125/259 (48.26%), Query Frame = 0 Query: 333 IVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDK--------IRRHHRN------AEMRKLSFEEFITKVEQ-GLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGA------------------WEEFGADGWGEDGASAIFRGEKNKLHSGGADEKVNIFYSNATTKNRVMALMAPD 559 IVI ++L+FF KVAC FKKLFRRM E+W ++LPH+P+ NGLTYL + +A IL+ P WT+AIF+RDP R +SAYLDK I+RH N E SF F+ +E+ + HW PQ++ + + ++FVG F+ + +DT+ LL +L W ++G GWG +IF + H A K+ +Y NA+ + L A D Sbjct: 158 IVIEEYKLVFFTQGKVACTVFKKLFRRMMNIENWNVDN-------------TKLPHNPRENGLTYLYHYNVADALTILSHPDWTRAIFVRDPKERLLSAYLDKAARKKGSYIQRHCCNQKESTCGEEANASFMGFLQVIEKLCCCDPHWRPQTKRID-STFRNFVNFVGHFDRIQQDTKRLLDRLNTTKHNTIYDSDTDNENSDLWTKYGVSGWGSFRNESIFAQDTKARHQTSAITKLKQYY-NASVEAFAENLFADD 401
BLAST of NO10G00030 vs. NCBI_GenBank
Match: XP_002182358.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46259.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 124.0 bits (310), Expect = 1.500e-24 Identity = 78/234 (33.33%), Postives = 116/234 (49.57%), Query Frame = 0 Query: 325 QSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDKI---RRHHRN---------AEMRKLSFEEFITKVEQGLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWGEDGASAIFR---GEKNKLHSGGADEKVNIFYS 544 + D PIV+ ++LIFF KV C +K+LFRRM DW + +P +P++NGL YL A+ ++ WT+AIF+RDP RF+SAYLDK+ + R + S + F V Q ++ HW PQ + W V +FVG E+ ++D E LL+ +GAW+ +G GWG G +IF+ G + H+ A E+ FY+ Sbjct: 75 RGDWDGAPIVLEEYKLIFFTTAKVGCTVWKQLFRRMMKISDW-----------NVHNTARLIPWNPELNGLKYLYDYNRTVASYMMIANDWTRAIFVRDPKERFLSAYLDKVVDNKDFFRKQCCLFTGACVAPARESLQGFFDAV-QTCEDAHWKPQHRRMESKYWRYV-NFVGHMETTSQDAEHLLKMIGAWKLYGQSGWGRSGNLSIFKTSAGGAGREHATNAKERFAAFYT 295
BLAST of NO10G00030 vs. NCBI_GenBank
Match: XP_009035545.1 (hypothetical protein AURANDRAFT_63102 [Aureococcus anophagefferens] >EGB09481.1 hypothetical protein AURANDRAFT_63102 [Aureococcus anophagefferens]) HSP 1 Score: 120.6 bits (301), Expect = 1.600e-23 Identity = 81/230 (35.22%), Postives = 113/230 (49.13%), Query Frame = 0 Query: 337 RFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDKIRRHHRNA---------EMRKLSFEEFITKV---------EQGL---KNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLGAWEEFGADGWGEDGASAIFRGEKNKLHSGGADEKVNIFYSNA 546 + +L++ VPKVAC EF +LF R++G DP + DKPL KI +T T L +NDPTWTK F RDP R +SAYLDK R + + + ++F F+ ++ GL N HW PQ N++K+LP +FVG+F+ L + E LLR LG WE +GA GW + + +K K GG D+ +F NA Sbjct: 48 KHKLLYCAVPKVACTEFMRLFFRLKGENQNQRWKGDPH--FRQDKPLFN-----KIMNVTTATAL--------MNDPTWTKFAFWRDPAERLLSAYLDKFANGKRYSTGSYAVRIFKDKHMNFSGFVDRIASKNRVRGKPDGLHPNTNPHWRPQRFMCNMEKFLPAYNFVGSFDHLGDHAEKLLRALGLWEAYGAAGWTKALKRTVV--DKIKGAVGGGDDGGRMFQKNA 260
BLAST of NO10G00030 vs. NCBI_GenBank
Match: XP_004994655.1 (hypothetical protein PTSG_04561 [Salpingoeca rosetta] >EGD72832.1 hypothetical protein PTSG_04561 [Salpingoeca rosetta]) HSP 1 Score: 89.0 bits (219), Expect = 5.200e-14 Identity = 75/273 (27.47%), Postives = 123/273 (45.05%), Query Frame = 0 Query: 279 SPSQLKIMATETHTVPQPQESSQLEKKVGLNVILEPGDFALDSALEQSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHD--PKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDKIR----RHHRNAEMRKLSFEEFITKVEQGLK-NRHWNPQSQFYNLDKWLPVMDFVGAFE--SLAEDTETLLRKLGAWEEFGADGWGEDGASAIFRGEKNKLHSGGADEKVNIFY 543 S S K+ TE P + L+ + G ++ P ++ + H PIV ++I + K AC ++K RR++G++DW T ND R+ H+ + +GLTYL+ EA+ ++NDP++ KA+ +R+P+TR +SA+ DK H N + K + + V G + + HW QS F L +W D V E + + ++ + +F +GWGE A F H GA K +Y Sbjct: 11 SSSMRKLQQTEERQSPSASALAMLKWEDG-DLPTSPWEY-----WTERSGHWAPIVDHEHKIILCTITKAACTAWRKFMRRLKGFKDWDT--ND-----------ERITHNYGGRQSGLTYLSAYSTLEADKLMNDPSYFKAVVVRNPLTRVLSAWKDKYGPNSVHHWGNIKWDKFA----LNNVHAGCRGDEHWMQQSCFCGLRRW--KYDRVAHMEGDGMQRLAKEMVSRGNVPSDFVNNGWGEKRDEA-FLQSNTVFHRTGASTKAASYY 257
BLAST of NO10G00030 vs. NCBI_GenBank
Match: XP_005717974.1 (Carbohydrate sulfotransferase [Chondrus crispus] >CDF38105.1 Carbohydrate sulfotransferase [Chondrus crispus]) HSP 1 Score: 82.8 bits (203), Expect = 3.700e-12 Identity = 65/198 (32.83%), Postives = 88/198 (44.44%), Query Frame = 0 Query: 333 IVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDKIRR---HHRNAEMR---------------------KLSFEEFITKVEQ---GLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLG 504 IV RL+F VPK A +K L RR E D+A LSR H P +GL YL EA IL DPT+ + +F+R+P R +S Y+DK R + AE R +L+F F+ V N HW PQ+ + + LP DFVG E+L +D + + R+LG Sbjct: 59 IVSEVARLVFCPVPKAASSNWKYLIRRWERVPDFAN--------------LSR-AHRPATSGLRYLADYAPAEAEAILRDPTYFRFVFVREPYARLLSCYMDKFRNTDPEYVRAEYRTFLAALKGWTFARDVDVERDPRLTFAHFVQAVADMPVQDMNAHWMPQTAYCAIGV-LP-YDFVGRMENLKQDVDYVFRRLG 239
BLAST of NO10G00030 vs. NCBI_GenBank
Match: WP_073325459.1 (hypothetical protein [Aestuariibacter aggregatus] >SHH43279.1 chondroitin 4-sulfotransferase 11/chondroitin 4-sulfotransferase 13/dermatan 4-sulfotransferase 1 [Aestuariibacter aggregatus]) HSP 1 Score: 82.0 bits (201), Expect = 6.400e-12 Identity = 63/201 (31.34%), Postives = 90/201 (44.78%), Query Frame = 0 Query: 333 IVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDKIRRHHRNAEMRKLSFEEFITKVEQGLKNRHWN-PQSQFYNLDKWL------------------------PVMDFVGAFESLAEDTETLLRKLGAWEEF 509 I + + IF +VPKVAC +K +FR M G ED+ S L HD + +GLTYL+ + A++ILNDP K F+RDP +R +SAY +K+ NA + +F KV +KN + + F N WL DFVG FE++ D +L ++G EF Sbjct: 7 IYLEAQKFIFAYVPKVACTNWKCIFRYMNGAEDYLD---------------SGLAHDREKSGLTYLSN--EENAHVILNDPNIKKFTFVRDPYSRILSAYRNKVEPF--NASKGSMYAHDFWFKVYSQIKNEAASGDKVTFTNFLDWLLSSEHXXXXXXXXXXXSDIVHPKAVSFDFVGKFENIQNDAAHILSEIGCDLEF 188
BLAST of NO10G00030 vs. NCBI_GenBank
Match: OLP87068.1 (hypothetical protein AK812_SmicGene31764 [Symbiodinium microadriaticum]) HSP 1 Score: 73.6 bits (179), Expect = 2.300e-9 Identity = 58/188 (30.85%), Postives = 90/188 (47.87%), Query Frame = 0 Query: 56 FVFLMGTGRSGSSTVMAFLNGVPGIHISGEDNGLIDHLAEVHSIFNNATGRAKKGMAWTSTVDIAEIEQDMRNMIMHTVNPSPGS------KTIFFKEYRALNEELFNFIRRLLPCAKFIGEIREDVSSQSRSGLYKLNDSSDSISSSLAANNQFLKSLADKNQDHMFLITSEEFSTQAFYELLTFLG 238 F+F++ TGRSGSST+M +N VPGI + GE++G + +A + R K +S AE+ Q ++++ + P + FKE R NE + FIRR LPC++ I R DV +QS S +K + +L+ +L ++ F + E FS F L +LG Sbjct: 68 FLFIVATGRSGSSTLMNMVNQVPGIFLWGENHGALGGIAGMQE-------RFLKAAQDSSDARRAELLQSSQDVVWEWLTPPTFQNDWKRVEVRGFKEIR-WNETMVQFIRRSLPCSRLIFNFRLDVEAQSHSDFFKRKQRKPG-AEALSTITDKAAALVARSGLPAFQLPLENFSAPEFTRLARWLG 246
BLAST of NO10G00030 vs. NCBI_GenBank
Match: XP_018896710.1 (PREDICTED: carbohydrate sulfotransferase 11 [Bemisia tabaci]) HSP 1 Score: 72.8 bits (177), Expect = 3.900e-9 Identity = 55/199 (27.64%), Postives = 90/199 (45.23%), Query Frame = 0 Query: 333 IVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHD--PKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDKIRRHHRNAEMRKLSFEEFITKVEQGLKNRH---WNPQSQFYNL-------------DKWLPV----------MDFVGAFESLAEDTETLLRKLG 504 +V R+ +L++ +VPKVAC +K++ + G S S +P D K +T L+ L +EA ++L+ T+TK IF+R P R +SAY +K+ +H +++ + F I K + H W F + WLP+ DF+G +E+L ED E LL+ +G Sbjct: 89 LVDRKHKLLYCYVPKVACTNWKRVLMVLSG--------------LSNSSDASAIPADVAHKPGTITRLSDLDPEEAQLLLD--TYTKFIFVRHPFERLLSAYRNKLEQHWLSSKYFQSRFGRHIVKHYRPNPTNHSLLWGDDVTFQEFVTFLIARENMTANEHWLPIEDLCRPCYINYDFIGKYETLYEDAEYLLKHIG 271
BLAST of NO10G00030 vs. NCBI_GenBank
Match: XP_002294644.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88004.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 72.4 bits (176), Expect = 5.000e-9 Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = 0 Query: 320 DSALEQSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYL 434 DS + + PIVI ++L+FF K+ ++L RRM G++++A P +Y PK NGLT L + PL++AN ++ WT+A+F+RDP R +S +L Sbjct: 100 DSIYRKYNISTTPIVIEEYKLVFFTCEKIGSTVIRQLLRRMMGFDNYAYHGGGIPHIY------------PK-NGLTPLHKFPLEKANEMMTSDEWTRAMFMRDPKERALSGFL 200
BLAST of NO10G00030 vs. NCBI_GenBank
Match: XP_014249355.1 (carbohydrate sulfotransferase 11 [Cimex lectularius]) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-8 Identity = 55/212 (25.94%), Postives = 95/212 (44.81%), Query Frame = 0 Query: 320 DSALEQSDKHKGPIVIRRFRLIFFHVPKVACEEFKKLFRRMEGYEDWATSYNDPPGLYSPDKPLSRLPHDPKINGLTYLTQLPLDEANMILNDPTWTKAIFLRDPMTRFVSAYLDKIRRHHRNAEMRK-------------------------LSFEEF---ITKVEQGLKNRHWNPQSQFYNLDKWLPVMDFVGAFESLAEDTETLLRKLG 504 DS + D +V ++ +L++ +VPKVAC +K++F + G S N+ L P P L+ + +A +LN T+TK IF+R P R +SAY +K+ +++ N++ + ++FEEF +TK + N HW P + + DF+G +E+L D+ LL+ +G Sbjct: 79 DSIWDNRDLLDHILVDKKHKLLYCYVPKVACTNWKRIFMVLNG------STNETDVLSIPANLAHSRPE------YLALSNYSIADAKSLLN--TYTKFIFVRHPFERLLSAYRNKLEKNYINSKYFQSRLGRYIIKHYREKPTNSSLVNGDDVTFEEFTAYLTKSMSSMYNEHWKPVERL--CEPCQIQYDFIGKYETLITDSNYLLKSIG 274 The following BLAST results are available for this feature:
BLAST of NO10G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO10G00030 ID=NO10G00030|Name=NO10G00030|organism=Nannochloropsis oceanica|type=gene|length=5430bpback to top protein sequence of NO10G00030.1 >NO10G00030.1-protein ID=NO10G00030.1-protein|Name=NO10G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=563bpback to top Synonyms
Publications
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