NO10G00010, NO10G00010 (gene) Nannochloropsis oceanica

Overview
NameNO10G00010
Unique NameNO10G00010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5390
Alignment locationchr10:206..5595 +

Link to JBrowse

Properties
Property NameValue
Descriptionzinc finger (C3HC4-type RING finger) family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:206..5595 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008146sulfotransferase activity
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR005331Sulfotransferase
IPR008166DUF23
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Homology
BLAST of NO10G00010 vs. NCBI_GenBank
Match: EWM26561.1 (methyltransferase family [Nannochloropsis gaditana])

HSP 1 Score: 167.5 bits (423), Expect = 3.300e-37
Identity = 96/287 (33.45%), Postives = 152/287 (52.96%), Query Frame = 0
Query:  135 DMDPWQVVADRSVHHPSICIIALIRNEGQFLDEWIAFHWLQGIRKFILFDDGSEDGTRKLLDKYIQRGIVDYRTVDRSAPHITKDKGHIRIKMDYINACLKEISAAREEHGLHWVLLADADEFAYAKNPNMTLAQALEAHYKGEICVNIFRKDFGSSGHIFRPKSGLVIENYVHSARHHRTSA-PRKLIINLKPHNESIKVTRVPDTHQLLNPKEVQCIDNSQ-SQLQMNQYLRSLEDYDVRVKTFYLSSDQKYKTDPLRHFWDRNQHEFFDDSAPQRYACHVRLLL 420
            + DPW  + D      ++C++  ++NE + LDE+IAFHWLQG+ KF+++DD S+D    +L+KY+  GIV+Y  +    P+ +  K    +++  +N C K +    EE GL W+   DADEFA +  PN +L++ L  +Y+GE C+ I R  +GSS    +P SGLVIE Y+ ++  +       KLI N+ P  ++I  T +   H       V C   +    +++N YLRSLE+Y    K ++  +  + +  P   F+ R             YAC V  LL
Sbjct:  199 EADPWNKL-DGVRRDIAVCMV--LKNEARILDEYIAFHWLQGVSKFVIYDDASQDNPWSVLEKYVALGIVEYHNM-TGHPNPSSSK----LQITSLNTCSKSLRQRAEEEGLRWIAFIDADEFALSSVPNESLSETLNKNYRGEACLAIHRTWYGSSFQHKKP-SGLVIETYLMASSDYGGGIWNGKLIANINPEGKAINATTLSTVHSFRKEDNVSCKSQTTIRDVRVNHYLRSLEEYS--TKAYHNHNKPQLEETPFERFF-RRDFNLVSSPIAADYACRVHALL 473          
BLAST of NO10G00010 vs. NCBI_GenBank
Match: EWM28062.1 (methyltransferase family [Nannochloropsis gaditana] >EWM28063.1 methyltransferase family [Nannochloropsis gaditana])

HSP 1 Score: 157.9 bits (398), Expect = 2.600e-34
Identity = 91/292 (31.16%), Postives = 143/292 (48.97%), Query Frame = 0
Query:  135 DMDPWQVVADRSVHHPSICIIALIRNEGQFLDEWIAFHWLQGIRKFILFDDGSEDGTRKLLDKYIQRGIVDYRTVDRSAPHITKDKGHIRIKMDYINACLKEISAAREEHGLHWVLLADADEFAYAKNPNMTLAQALEAHYKGEICVNIFRKDFGSSGHIFRPKSGLVIENYVHSARHHRTSA-PRKLIINLKPHNESIKVTRVPDTHQLLNPKEVQCIDNSQ-SQLQMNQYLRSLEDYDVRVKTFYLSSDQKYKTDPLRHFWDRNQHEFFDDSAPQRYACHVRLLLLYLLK 425
            D+DPW            + I   I N+   +DE+IAFHW+Q + KF+++DDGS D    +L+KY+  GIV+Y  +  S  H     G + ++   +N C   +     E GL W+   D DEF  +  PN TL++ L  +Y GE C+ I R  +GSS    +P S LV E Y+ ++  +       KLI N+ P  + +  T +   H   +  ++QC    +   +++N YLRSLE+Y    K+ Y     ++  +PL+ F+ R             Y+C V  LL  + K
Sbjct:  212 DVDPWN---RHDGFRRDVAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIH-----GTVNLQTRAMNKCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKP-SSLVTETYLMASNDYGGGIWNPKLIANIYPEGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHYLRSLEEYS--EKSVYKDVMHEWLKEPLKQFF-RRDFNLVSSPIAADYSCRVHALLKQIQK 491          
BLAST of NO10G00010 vs. NCBI_GenBank
Match: EWM30112.1 (hypothetical protein Naga_100310g2 [Nannochloropsis gaditana])

HSP 1 Score: 135.2 bits (339), Expect = 1.800e-27
Identity = 93/285 (32.63%), Postives = 140/285 (49.12%), Query Frame = 0
Query: 1223 REKRAMEIDQECFRHGHGSIHFLHMRKAGGSTIHKALLPLFNSGR---LFRSEGFTFNITCLAEAGSMLHVTNLREPISRIVSHFYYEGQYKDLHDPVRHRRRTTMDEFHGFEPNQLQESGRLKQLFNET-------MTFPEYVRYILDKYDSDPEVYRRNRMR---EGVENYYIRTLTNRYRADTRRPIDETDLALAKEILGQFDVILIMEWLNDAEMAQYLDSVLGTNG-TVFPHENSVKPAQKTTGKDSIDEATMHRLRELNHYDLELYEWAKNFTKSRMEA 1494
            R +  M   Q CFR   GS   LHMRKAGG+T+   L  L  + R   ++ +EG TFN++C  + G M+ +T+LR+P++RI+S ++YEG+Y     P+            G +P           +++ET       ++F ++VRY+      D   + R   R     V+NYY++TLTNRYR +T   + + D  LA+ IL  FDV++I EW+  A    Y+   LG  G       N      +      ID      +   N +DL LYE+AKN    R+ A
Sbjct:  142 RRQAEMAQTQACFRARKGSAFLLHMRKAGGTTLRNYLSALVENDREQLVYVAEGRTFNVSCFHDQGEMMILTSLRQPLARILSSYWYEGRYDYKPAPL----------VPGTDP------ALAAAIYDETKAKAAVPLSFQDWVRYV---RQMDYVRWTRASARGVWYSVDNYYVQTLTNRYRHNTYAEVGKHDYELARRILASFDVVMITEWMGWANQTAYVQESLGEKGKDPSRGMNQRNKLIRLRDDTEIDREMFASVWRANTWDLLLYEFAKNLVTDRLAA 407          
BLAST of NO10G00010 vs. NCBI_GenBank
Match: CBJ29738.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 112.8 bits (281), Expect = 9.600e-21
Identity = 90/317 (28.39%), Postives = 143/317 (45.11%), Query Frame = 0
Query:  495 VAERSSQQP---RIAICSAIRNEGRDIEEWIAFHWLQGVRKFILYDDGSMDDTVQRLQKYVQRNIVDLRTLNRSIEGAPPERGHVGIQMAHVNACLEEMWTVR--DVQGIDWVLLHDADEYAYPTDLADMTLAEALSNHYKDDPCVTIYRKDFGTSGHVYRPETGLMIENYVLSADGY----RRDPDKLIINLRPL-NESNRVKHVYGAHKVFHWRVRKDN---------------------ICSIDKLQHLQMNHYLRSLEDYDLKVNTFYLATDDKYKIDPLKHFWERDRTEVIDDSAKQRYACKVRTLLAYMQE 781
            + ER ++ P   ++A C   ++ GR + EWIA+H+  GV +  +YDD S DDTV+ LQ +V   IV    L R+        GH   QM  +N CLEE    R  D     W+L HD DEY  P D   +T+A+AL  H     CV + R  +G  GH   P+ GL++E ++  A  +     R P + +   + +   S     ++  +++    V  D                      +C +  +  +++NHYL S  DY  K   ++     + K++  K   ERD      D+    +AC  R +L+ + E
Sbjct:  169 ILERRAKTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEITIYDDDSNDDTVEILQPFVDAGIVTY-VLERT--------GHWQNQMTPLNRCLEEHMVRRLSDNDAPRWLLFHDTDEYIVPVD-TSVTIAQALDKH-SSTCCVRVPRVTYGAGGHDEMPQ-GLLLEAFLQHAHLHDFKSNRLPKRALAGDKTVPTSSGGGLSLFLENQMLQVMVNLDTTQPLLGQATSRLKSMHNGQGCLCDVIPVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVE--KWLMERDMNSFKSDTI-TTWACATREVLSIVLE 470          
BLAST of NO10G00010 vs. NCBI_GenBank
Match: CBJ32491.1 (glycosyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 108.6 bits (270), Expect = 1.800e-19
Identity = 86/281 (30.60%), Postives = 133/281 (47.33%), Query Frame = 0
Query:  504 RIAICSAIRNEGRDIEEWIAFHWLQGVRKFILYDDGSMDDTVQRLQKYVQRNIVDLRTLNRSIEGAPPERGHVGIQMAHVNACLEEMWTVR---DVQGIDWVLLHDADEYAYPTDLADMTLAEALSNHYKDDPCVTIYRKDFGTSGHVYRPETGLMIENYVLSA---DGYRRDPDKLIINLRPLNESNRVKHVYGAHKVFHWRVRKDNICSIDK---LQHLQMNHYLRSLEDYDLKVNTFYLATDDKYKIDPLKHFWERDRTEVIDDSAKQRYACKVRTLL 776
            ++AIC   ++  R + EWIAFH+  GV +  +YDD S D+T + L  +V+  IV      R I     +R     QM  +N CLE+    R   D     WVL HD DEY YP+D   + + +AL  H++   C  + R  +G++GH   P  GL++EN+++ +     +     K+++NL P      V  V    +  H     D  C+  K   +  L++NHYL S+ DY +   T Y     K ++   K    RD      D   + +AC  R +L
Sbjct:    2 KVAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIV------RYIFEVIFDR---MTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSD-TSLNIRDALEKHHR-TCCALVSRVQYGSAGHDEMPR-GLLLENFLMHSHPGPQFGNGLAKVMVNLDP--SEPEVGVVEPPLRSMHNAEGCD--CAGSKFGGVSDLRINHYLGSIGDY-MDRTTRYWEAKKKGEMAAAKTVLRRDINNYRSDDI-EHWACATREVL 264          
BLAST of NO10G00010 vs. NCBI_GenBank
Match: CBJ29801.1 (glycosyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 106.3 bits (264), Expect = 8.900e-19
Identity = 90/334 (26.95%), Postives = 153/334 (45.81%), Query Frame = 0
Query:   94 EDPSAKGGDRGTDSS----AVRLDGYPCQIDGVLAKSQLANGNDGDMDPWQVVADRS-VHHPSICIIALIRNEGQFLDEWIAFHWLQGIRKFILFDDGSEDGTRKLLDKYIQRGIVDYRTVDRSAPHITKDKGHIRIKMDYINACLKEISAARE---EHGLHWVLLADADEFAYAKNPNMTLAQALEAHYKGEICVNIFRKDFGSSGHIFRPKSGLVIENYVHSARHHRTSAPRKLIINLKPHNESIKVTRVPDTHQLLNPKEVQCIDNSQSQLQMNQYLRSLEDYDVRVKTFYLSSDQKYKTDPLRHFWDRNQHEFFDDSAPQRYACHVRLLL 420
            + P +K   +  DS+    + +  G P  IDG    +   +G DG  +  +  A  +  +   + +    ++ G+FL EW+AFH+  G+ +  ++DD S D T ++L  ++  GIV Y         I         +M+ +N CL+     ++   E+   W+L  D DE+ Y ++ +MTL  AL  H +   C  + R  +GS GH   P+ GLV+++++         A  K+++NL P  ES  V   P    +   +   C+D  Q  L +N YL S  DY  RV   Y S+      DP      R+ ++   D+    ++C  R +L
Sbjct:  113 QSPQSKDEKKSDDSTEPPESWKGRGGPFGIDGDWRNALQEDGGDGAENGLRGEACMTHENRKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRY---------IFDMIPRRNAQMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNKH-ESTCCALVRRIQYGSGGHDEMPR-GLVMDSFMAHQNDSSHHANPKVVVNLTP-TESDPV--APPLKSMHKAEGCACLDLKQEVL-INHYLGSRGDYLERVHR-YWSTYMAGDNDPGHRLSQRDVNDRVSDTI-THWSCSTREVL 429          
BLAST of NO10G00010 vs. NCBI_GenBank
Match: WP_013281803.1 (glycosyltransferase family 2 protein [Butyrivibrio proteoclasticus] >ADL35150.1 glycosyl transferase GT2 family [Butyrivibrio proteoclasticus B316])

HSP 1 Score: 99.0 bits (245), Expect = 1.400e-16
Identity = 84/278 (30.22%), Postives = 134/278 (48.20%), Query Frame = 0
Query:  119 IDGVLAKSQLANGNDGDMDPWQVVADRSVHHPSICIIALIRNEGQFLDEWIAFHWLQGIRKFILFDDGSEDGTRKLLDKYIQRGIVDYRTVDRSAPHITKDKGHIRIKMDYINACLKEISAAREEHGLHWVLLADADEFAYAKNPNMTLAQALE---AHYKGEICVNIFRKDFGSSGHIFRPKSGLVIENYVHSARHH-RTSAPRKLIIN--------LKPHNESIKVTRVPDTHQLLNPKEVQCIDNSQSQLQMNQYLRSLEDYDVRVKTFYLSSDQ 385
            ID +L K +LAN +D              +  ++  +A + NE ++++EWI +H L G+ KF +FD+GS D TR+LL KYI +GIV+Y         +   KG    ++D   A L+     + +    +V   D DEF    + +  L Q L+    H+     +++    FGSSGH  RP+ GLVI+NY + A ++  T+   K I N          PH   ++     D  + LN K ++ ID+       N Y  +  DY +RV  +Y  S++
Sbjct:   51 IDRLLVKRELANFHDRH------------YINNLSFVACVYNEARYIEEWIEYHRLVGVDKFYIFDNGSTDNTRQLLQKYIDKGIVEY--------ELFPGKGK---QLDMYYAGLR-----KSKRTSKYVGFIDLDEFVVPTDSSKNLVQVLDERFKHFPNMAVLSMNWLVFGSSGHKNRPE-GLVIDNYTNRAEYNSSTNRLLKFICNPRLIKGCLTSPHFAYLR----NDKLKQLNEKGIE-IDS-----PWNDYPNNTYDY-IRVNHYYGKSEE 288          
BLAST of NO10G00010 vs. NCBI_GenBank
Match: WP_026661640.1 (hypothetical protein [Butyrivibrio proteoclasticus])

HSP 1 Score: 99.0 bits (245), Expect = 1.400e-16
Identity = 77/274 (28.10%), Postives = 132/274 (48.18%), Query Frame = 0
Query:  151 SICIIALIRNEGQFLDEWIAFHWLQGIRKFILFDDGSEDGTRKLLDKYIQRGIVDYRTVDRSAPHITKDKGHIRIKMDYINACLKEISAAREEHGLHWVLLADADEFAYAKNPNMTLAQALE---AHYKGEICVNIFRKDFGSSGHIFRPKSGLVIENYVHSARHHRTSAPRKLIINLKPHNESIKVTRVPDTHQLLNPKEVQCIDNSQSQLQ--MNQYLRSLEDYDVRVKTFYLSSDQKYKT----------DPLRHFWDR----NQHEFFDD 406
            ++  +A + NE ++++EWI +H L G+ KF +FD+GS D TR+LL KYI++GIV+Y +           KG    ++D   A LK+           +V   D DEF    + + TL   L+   AH+     ++I    FGSSGH  RP  GLVIENY++ A +  T+     ++    +   IK          L  ++++ ++    ++    N Y  +  D+ +R+  +Y  S++  K           D ++  WD+    +++E  DD
Sbjct:   71 NLSFVACVLNESRYIEEWIEYHRLVGVDKFYIFDNGSTDNTRELLQKYIEQGIVEYESF--------PGKGK---QLDMYYAGLKKC-----RKDTKYVGFIDLDEFVVPTDSSKTLVDVLDERFAHFANMAVLSINWLVFGSSGHKTRP-DGLVIENYLNRAEYDSTT---NRLLKFIANPRLIKGCLTSPHFAYLRNRDLKQLNEKGIEINSPWNDYPNNTYDF-IRINHYYGKSEEDCKAKFNRGNVSRPDYIKRKWDQFTLYDRNEVHDD 323          
BLAST of NO10G00010 vs. NCBI_GenBank
Match: WP_071520053.1 (hypothetical protein [Streptococcus parauberis] >OHY29811.1 hypothetical protein BI362_10405 [Streptococcus parauberis])

HSP 1 Score: 91.3 bits (225), Expect = 3.000e-14
Identity = 72/277 (25.99%), Postives = 126/277 (45.49%), Query Frame = 0
Query:  152 ICIIALIRNEGQFLDEWIAFHWLQGIRKFILFDDGSEDGTRKLLDKYIQRG---IVDYRTVDRSAPHITKDKGHIRIKMDYINACLKEISAAREEHGLHWVLLADADEFAYAKNPNMTLAQALEAHY-----KGEICVNIFRKDFGSSGHIFRPKSGLVIENYVHSARHH-RTSAPRKLIINLKPHNESIKVTRVPDTHQLLNPKEVQCIDNSQS-------------QLQMNQYL-RSLEDYDVRVKTFYLSSDQKYKTDPLRHFWDRNQHEFFDD 406
            + I+A+I+NEGQ+++EW+ +H + G++KF L+D+ S D TR++L+KYI+ G   ++ Y  V +  P                       + A+  +   ++   D DEF Y+ N    +       +      G I VN   + FGSSG I +PK G V+EN+++ A  + R +   K I+N +      KV      H       V  +D + +             ++++N Y  +S E++  R K     +  + K   L  F   + ++ FDD
Sbjct:   43 LAIVAIIKNEGQYIEEWLRYHIVAGVQKFFLYDNDSSDNTREILEKYIRAGYVYLIPYPGVAKQLPAYND-------------------ALAKHRYDCRYIAFIDVDEFLYSCNKLKNVRDFCNEIFHDYPNAGGIAVN--WRMFGSSGLIQKPKQGGVLENFLYRASENGRGNDCIKTIVNPR------KVYAFEHVHYPTYIFGVHSVDENGNIINGWNHSNLEIKKIRINHYFTKSKEEWIERRKIGKADAKDRTKIRSLEEFQLHDNNDIFDD 292          
BLAST of NO10G00010 vs. NCBI_GenBank
Match: OIM20752.1 (hypothetical protein ATX59_07495 [Oenococcus oeni])

HSP 1 Score: 90.5 bits (223), Expect = 5.100e-14
Identity = 77/273 (28.21%), Postives = 129/273 (47.25%), Query Frame = 0
Query:  500 SQQPRIAICSAIRNEGRDIEEWIAFHWLQGVRKFILYDDGSMDDTVQRLQKYVQRNIVDLRTLNRSIEGAPPERGHVGIQMAHVNACLEEMWTVRDVQGIDWVLLHDADEYAYPTDLADMTLAEALSNHYKDDPCVTIYRKDFGTSGHVYRPETGLMIENYVLSA-DGYRRDPDKLIINLRPLNESNRVKHVY---------GAHKVFHWRVRKDNICSIDKLQHLQMNH-YLRSLEDYDLKVNTFYLATDDKYKIDPLKHFWERDRTEVIDD 762
            S +  + + S ++NEG  I+EWI FH L GV KFI+YD+GS DDT   LQ Y+   IV    L    +  P  R  +  Q+  V+A               WV+  D DE+  P  ++ +TL + L         + I    +G++  + RP+ GL+IEN+   A + Y  D   +I + R ++  N   H+Y           H+++ +   +         +  ++NH Y +SLE+Y+LK+     A + K  +  +  F  +D+ E+ D+
Sbjct:   63 SSERELIVLSIVKNEGFYIKEWIDFHLLIGVDKFIIYDNGSTDDTKTILQPYIDSKIVRYIYLPGESQQVPAYRDAIKNQL-KVSA---------------WVITIDVDEFLVP--VSQVTLKDFLKTVPNSVSQIMIGWMVYGSNNLICRPK-GLVIENFSRHAKNDYIADYKSIIKSERFIDVLN--AHMYLVAGKTVDENMHRIWSYPYSEMIGSRPASKRIFRINHYYTKSLEEYELKIKRGD-AYNSKINLKSMAEFHMQDKNELTDN 313          
The following BLAST results are available for this feature:
BLAST of NO10G00010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26561.13.300e-3733.45methyltransferase family [Nannochloropsis gaditana... [more]
EWM28062.12.600e-3431.16methyltransferase family [Nannochloropsis gaditana... [more]
EWM30112.11.800e-2732.63hypothetical protein Naga_100310g2 [Nannochloropsi... [more]
CBJ29738.19.600e-2128.39conserved unknown protein [Ectocarpus siliculosus][more]
CBJ32491.11.800e-1930.60glycosyltransferase [Ectocarpus siliculosus][more]
CBJ29801.18.900e-1926.95glycosyltransferase [Ectocarpus siliculosus][more]
WP_013281803.11.400e-1630.22glycosyltransferase family 2 protein [Butyrivibrio... [more]
WP_026661640.11.400e-1628.10hypothetical protein [Butyrivibrio proteoclasticus... [more]
WP_071520053.13.000e-1425.99hypothetical protein [Streptococcus parauberis] >O... [more]
OIM20752.15.100e-1428.21hypothetical protein ATX59_07495 [Oenococcus oeni][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR091ncniR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G00010.1NO10G00010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|663979gene_10825Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G00010.1NO10G00010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G00010 ID=NO10G00010|Name=NO10G00010|organism=Nannochloropsis oceanica|type=gene|length=5390bp
AGGAGAGTACTGATTCATTTTAAAATGAATCAGTACCTCAGAAGTTTGAA
GGATTATGATAAGAAACTTAGAAGCGACTTTTTCTCGGGGACCCAGAAGT
ATACGAAGGATCCCTTGCAACAATTTTGGGCGCGTGAACTCAATCAAGTC
CTGGATGACTCAGCCGCCCGTGGTTATGCCCAGGATGTACGAACCCTTTT
GAACTATTGGTCCACTACAGAAGATCTGGGAAATAACGTGGTATCAATCC
TGCAAAGACGACTGGATATATCTACGGATGAGGACCCGAGCGCCAAAGGC
GGTGACCGCGGCACTGACTCGAGTGCTGTGAGACTGGATGGATACCCATG
CCAGgtaagttataatttaagcatacataccagaaaaagatatcgcaaaa
gcactttccattactagcaccacttcaatttactactagATTGATGGAGT
TCTAGCAAAGTCTCAATTGGCAAATGGGAATGACGGTGACATGGACCCCT
GGCAAGTTGTTGCTGACCGTTCAGTTCATCATCCATCGATTTGCATTATT
GCTTTAATTAGAAATGAAGGTCAGTTCCTTGACGAATGGATTGCTTTTCA
TTGGTTACAAGGTATCCGCAAGTTTATCCTCTTTGACGATGGGAGCGAGG
ATGGGACACGTAAGCTATTGGACAAATATATACAGCGCGGCATTGTCGAT
TATCGTACAGTTGACCGTTCTGCGCCGCATATTACAAAGGATAAAGGTCA
CATACGCATCAAAATGGACTATATTAATGCTTGCCTAAAGGAGATCTCAG
CGGCTCGGGAAGAACATGGCCTTCATTGGGTGCTTTTAGCTGATGCAGAC
GAATTTGCTTACGCTAAGAATCCTAACATGACCCTCGCTCAGGCATTGGA
GGCGCATTACAAGGGTGAAATCTGTGTGAACATCTTTCGAAAAGATTTTG
GGAGTTCCGGTCACATTTTTCGGCCCAAGTCGGGGCTTGTGATCGAGAAC
TATGTCCATTCTGCCCGTCATCATCGAACTTCTGCGCCTAGGAAGCTCAT
CATCAACTTGAAGCCGCACAATGAGAGTATCAAGGTGACGCGTGTCCCTG
ATACGCACCAGCTACTCAATCCCAAGGAAGTCCAATGCATAGATAACAGC
CAAAGTCAGCTGCAAATGAACCAGTACCTGCGCAGTTTGGAGGATTACGA
TGTCAGAGTGAAAACTTTCTATTTGTCAAGCGACCAGAAGTACAAGACGG
ATCCTTTGAGACATTTCTGGGATCGCAATCAACATGAGTTTTTTGATGAT
TCCGCCCCACAGCGCTACGCCTGCCATGTCCGGCTTCTTTTGCTCTATCT
TTTGAAAGACGGTCAAGCAGATTCTTATGGGCAAAGCAGTGGGACATTCG
ATGGTGATCTTTTGGAGACCAATGTGGTGGCTTCCTCTCTCTTGACGCCC
GAGGATTCATCATTGGATAACTTTGGGACGACAACGGCTGGTCTTGCTTC
GTCTCCAAGTGGCGCGGCTTGTGCGTCCACTTCTACAGGTCTCTTGAGCA
AAGATCCGTGGGCTGCAGTCGCCGAACGTTCTTCCCAACAGCCAAGGATA
GCAATCTGCTCTGCCATTCGTAACGAGGGGCGTGACATTGAGGAATGGAT
TGCTTTTCATTGGCTCCAAGGTGTCCGTAAATTTATTCTTTATGATGATG
GCAGTATGGATGATACGGTCCAACGGTTACAGAAGTATGTGCAGCGCAAC
ATTGTCGATTTGCGCACACTGAACCGATCGATAGAGGGTGCGCCCCCTGA
GAGAGGCCACGTCGGAATCCAGATGGCGCATGTAAATGCTTGCCTGGAGG
AAATGTGGACAGTGCGAGATGTGCAAGGCATTGATTGGGTGTTATTACAC
GATGCAGACGAATACGCTTATCCCACGGATCTTGCAGACATGACCCTTGC
TGAGGCCTTGAGTAATCATTACAAGGATGATCCCTGCGTAACTATCTACC
GGAAGGATTTTGGCACTTCTGGCCATGTTTACCGACCCGAGACAGGGCTT
ATGATAGAAAACTATGTCCTTTCCGCGGATGGTTACCGTCGCGACCCAGA
TAAGCTCATCATCAATTTGAGGCCACTAAATGAGAGTAATCGGGTCAAAC
ATGTCTATGGTGCTCACAAAGTATTCCACTGGCGCGTGCGGAAAGATAAC
ATATGTTCAATTGACAAACTTCAGCACCTGCAGATGAACCATTACCTCCG
CAGTTTGGAGGATTACGACCTGAAAGTCAACACTTTCTATCTAGCGACTG
ACGATAAGTACAAGATTGATCCTTTGAAACATTTTTGGGAGCGAGATCGG
ACAGAAGTTATAGACGATTCTGCGAAACAGCGCTATGCCTGTAAGGTCCG
GACCTTATTGGCTTACATGCAGGAAGACCGCGCGGAGTTTGTACCGTCTG
TGCACGCTTTATCCCGCTTAGCATTAGCTGTTGATGCTCCTTTATCGTCG
AGCTACCTTGCTGCTCATGCTTTTGGTTTAAAAACTATTCGACGTAAGAC
TTCTTCCGCTTCTTCCATCAACAAACCGTCTGTGACCAATGACAAGCTCC
TTTCCCAACTACTTGGACCTCATGATCCGGCCGCGCACCCTTTATTAACC
GATTCATTCCAAGAGTATCCTTGTCAGgtaagatttagtttggtacaaca
aactcaaaccggtggagattcattttgtcttatatacacacttgtttaca
atctctatctctatctctcccttgttggctaccaaacacacacagGCCGA
CCAAGATACGACCTCAACAAGTCATACCACCACGGCCTTATTCGCGTCAC
AACAACTCTCCTCATCTCATGACCCTTGGGCTACCGTTGCTGAGCGTTCT
GTGCATGAGTCCACCATCGCCATCTGCGCCCTTGTCTGCAACGATGCGCT
TTTCTTGGACGAATGGATTGCATATCATTGGTTGCAAGGGGTCCGTAAGT
TTGTACTGTACGACGACAATAGCGTGGATTTCACGCACGCTGTATTGGAT
AAATACGTCCAGCGCGGCATTGTCGACTTGCGTAAAGTGGACCGTTCGGT
CGAACCTGTAACAATGAAGGGCCACCACATGGGGATAGAGATGATGCATA
TCAATTCTTGTCTGATGGAGCTACAGACCTTGCATGAGACGCCAGACTTT
GATTGGGTACTCTTCTCTAACGTGGATGAGTTTGCCTACGCCAAGGAAGC
TGGCCTGACTCTGGCCGAGTCTCTCGACATTTATTACAAAGACCAACCAT
GTGTCCATTTCTTTCGCACGGATTTTGGCTCCTCCTCTCGCTTATATCGA
CCGCAGAGTGGACTTACCATTGAGAATTACATCCTTTCTGGTCTTTCATT
CCGATCCCGTGTCCCTAGAAAGCTGGTTGTTAACCTGCGGCCCCAAGATG
TCACCAAGAGCATCTCCAACATATACAGCACTCATCTCGTGCACAAGCCC
CTGCTCAACGACACAGCGGAGAGCAGGGTCTGTCTTGACGATGAGAAGCA
ATATTTGGAGATGAATCATTATTTGAAAAGCTTGGAGGATTATGAAGTCA
AGGCCAAGACTTATCACTTGCCAACTGACCTCAAATACAAAAAAAACTTT
CTGGCTGAGTTCTGGGAGCGAGACAAGAATGAAGTCGTGAATGATGCCGC
CCCTCGACGTTTTGCGTGCGAACTGAGGGCTTTGTTGGGATACTGGGCAC
AAGATGCGGGCGACGGCAAGCAAATCAAAGCAGGGAAGAAAAGGCAACTA
AATACATCGGGCACCATCTTTGAAGATGGCGAAGAAGTGAAGGAGGACCA
AAGGAGGTTCTCAAAGCTTCGAGAAAAACGTGCTATGGAAATCGATCAAG
AGTGTTTCCGGCATGGCCATGGTTCCATCCATTTCCTCCACATGCGCAAG
GCCGGCGGTTCGACCATTCACAAGGCTTTGCTTCCCTTGTTCAATAGTGG
TCGCCTCTTTAGGAGTGAAGGCTTCACATTCAACATTACTTGTCTCGCCG
AAGCCGGGTCTATGTTGCATGTTACGAACCTTCGAGAACCTATCTCCCGT
ATCGTCAGCCATTTTTATTATGAGGGCCAATACAAGGATCTTCATGATCC
TGTTCGTCACCGTCGCCGGACCACCATGGACGAGTTTCATGGCTTTGAGC
CCAACCAATTGCAGGAGTCGGGGAGACTAAAACAGCTTTTCAATGAGACG
ATGACCTTTCCCGAATATGTGCGGTACATTTTAGACAAATATGACAGCGA
TCCGGAAGTATACAGgtaaatcaggaggctctttctctcccttttcaacc
tatctcgttcttctgtgcgggatagatataacacgatgactgaattacac
acacaaatatgcacacaaaactcgaaattctagGAGAAACCGCATGCGGG
AGGGCGTGGAAAATTATTACATAAGAACACTTACAAACCGCTACCGTGCG
GACACACGAAGGCCCATCGATGAGACCGgtaagtgaaaaagcaaaggtgg
ggtgcgcgttcccaacctcaggtcatagaatgtatcatgctactactttt
ctgaattgcaatgtatgaacgcctaatcactctctctctgcatgtcttca
aatgttatgttacatatgcatatttcagATCTGGCTTTGGCCAAGGAAAT
CTTGGGCCAGTTTGATGTTATCCTGATTATGGAGTGGCTAAATGATGCCG
AAATGGCACAATACCTTGATTCTGTCCTTGGCACCAATGGAACCGTTTTC
CCCCACGAAAACTCCGTCAAGCCTGCCCAAAAGACTACAGGGAAGGATTC
TATTGACGAGGCTACGATGCATCGTCTGCGGGAACTAAACCACTATGACT
TGGAACTCTACGAGTGGGCAAAGAATTTCACCAAGTCCCGAATGGAAGCA
ACCAAACAACGGCAGCAGCAGCAACAACAGCAGCAGCAGAATCACAAAGA
CCAGGAACAAGAGCAGGATAGGCCTGATGCTAATACCGATGCTGATTCTA
GCATCGCTCCTTTTGACATGACTCAATGTCGACCTTTACCACCAATACCC
GAGTACACAGTTCATGGGATCGCTTATGCAGACCTTCTCGCGAAGCCCGT
AGTGTATCTGCCCGTTTGCAACCATCCTTTTTACAAGGAAGGGGAAAGAG
AGAAATGGCAAGAGGGACTAGCGAAGGCATTACCAGAAATAAAGAGAGGG
AGAGGGAAGAGGAAATCATGAAACAAACAAAGAAAGAGGGCTGGACGGTT
GGGTTAATGCCGTATGAAGATGGTAACTACAAGACATCATTCGACTCTGC
CACCTTGGAAAGCGTCTTCTTCTATCATAATTTGAGCACC
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protein sequence of NO10G00010.1

>NO10G00010.1-protein ID=NO10G00010.1-protein|Name=NO10G00010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1600bp
RRVLIHFKMNQYLRSLKDYDKKLRSDFFSGTQKYTKDPLQQFWARELNQV
LDDSAARGYAQDVRTLLNYWSTTEDLGNNVVSILQRRLDISTDEDPSAKG
GDRGTDSSAVRLDGYPCQIDGVLAKSQLANGNDGDMDPWQVVADRSVHHP
SICIIALIRNEGQFLDEWIAFHWLQGIRKFILFDDGSEDGTRKLLDKYIQ
RGIVDYRTVDRSAPHITKDKGHIRIKMDYINACLKEISAAREEHGLHWVL
LADADEFAYAKNPNMTLAQALEAHYKGEICVNIFRKDFGSSGHIFRPKSG
LVIENYVHSARHHRTSAPRKLIINLKPHNESIKVTRVPDTHQLLNPKEVQ
CIDNSQSQLQMNQYLRSLEDYDVRVKTFYLSSDQKYKTDPLRHFWDRNQH
EFFDDSAPQRYACHVRLLLLYLLKDGQADSYGQSSGTFDGDLLETNVVAS
SLLTPEDSSLDNFGTTTAGLASSPSGAACASTSTGLLSKDPWAAVAERSS
QQPRIAICSAIRNEGRDIEEWIAFHWLQGVRKFILYDDGSMDDTVQRLQK
YVQRNIVDLRTLNRSIEGAPPERGHVGIQMAHVNACLEEMWTVRDVQGID
WVLLHDADEYAYPTDLADMTLAEALSNHYKDDPCVTIYRKDFGTSGHVYR
PETGLMIENYVLSADGYRRDPDKLIINLRPLNESNRVKHVYGAHKVFHWR
VRKDNICSIDKLQHLQMNHYLRSLEDYDLKVNTFYLATDDKYKIDPLKHF
WERDRTEVIDDSAKQRYACKVRTLLAYMQEDRAEFVPSVHALSRLALAVD
APLSSSYLAAHAFGLKTIRRKTSSASSINKPSVTNDKLLSQLLGPHDPAA
HPLLTDSFQEYPCQADQDTTSTSHTTTALFASQQLSSSHDPWATVAERSV
HESTIAICALVCNDALFLDEWIAYHWLQGVRKFVLYDDNSVDFTHAVLDK
YVQRGIVDLRKVDRSVEPVTMKGHHMGIEMMHINSCLMELQTLHETPDFD
WVLFSNVDEFAYAKEAGLTLAESLDIYYKDQPCVHFFRTDFGSSSRLYRP
QSGLTIENYILSGLSFRSRVPRKLVVNLRPQDVTKSISNIYSTHLVHKPL
LNDTAESRVCLDDEKQYLEMNHYLKSLEDYEVKAKTYHLPTDLKYKKNFL
AEFWERDKNEVVNDAAPRRFACELRALLGYWAQDAGDGKQIKAGKKRQLN
TSGTIFEDGEEVKEDQRRFSKLREKRAMEIDQECFRHGHGSIHFLHMRKA
GGSTIHKALLPLFNSGRLFRSEGFTFNITCLAEAGSMLHVTNLREPISRI
VSHFYYEGQYKDLHDPVRHRRRTTMDEFHGFEPNQLQESGRLKQLFNETM
TFPEYVRYILDKYDSDPEVYRRNRMREGVENYYIRTLTNRYRADTRRPID
ETDLALAKEILGQFDVILIMEWLNDAEMAQYLDSVLGTNGTVFPHENSVK
PAQKTTGKDSIDEATMHRLRELNHYDLELYEWAKNFTKSRMEATKQRQQQ
QQQQQQNHKDQEQEQDRPDANTDADSSIAPFDMTQCRPLPPIPEYTVHGI
AYADLLAKPVVYLPVCNHPFYKEGEREKWQEGLAKALPEIKRGRGKRKS*
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