NO09G03740, NO09G03740 (gene) Nannochloropsis oceanica

Overview
NameNO09G03740
Unique NameNO09G03740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6732
Alignment locationchr9:1073643..1080374 -

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Properties
Property NameValue
DescriptionCyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1073643..1080374 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: INTERPRO
TermDefinition
IPR029000Cyclophilin-like_dom
IPR024936Cyclophilin-type_PPIase
IPR002130Cyclophilin-type_PPIase_dom
Homology
[Close]
BLAST of NO09G03740 vs. NCBI_GenBank
Match: XP_018446879.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57 [Raphanus sativus])

HSP 1 Score: 231.1 bits (588), Expect = 1.600e-56
Identity = 124/274 (45.26%), Postives = 159/274 (58.03%), Query Frame = 0 
Query:  489 MSNIYHLEPPTKGKVVLKTSFGPVDIELWPREAPLACRNFVQLALEGYYDHTIFHRVVPGLCVQGGDPTGTGGGGESIYVGAEPGESGHIGKGRGGGFRSEIHTRLKFNHRGILAMANDVAEGGREAKESNRSQFFVTLDACEHLNGKHTIFGKVTGETIYNVLRMGEVGTDREDRPVTPGGELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAAKKDLNLLSFGDXXXXXXXXXXXXXXXXXXXXXXGGLRSVHDVVENNALLKNEAAD 763
            MS IY LEPPTKGKV++ T+ GP+DIELWP+EAP + RNFVQL LEGY+D TIFHRV+PG  VQGGDPTG+G GGESIY               GG F  E H+RL+FNHRGI+AMAN+       +  +N SQFF TLD C+ L+ KHTIFGKVTG++I+N+LR+GE+ T ++DRP+ P  ++                                +   K LNLLSFG+                        ++S HDV+ +  LLK EA +
Sbjct:    1 MSTIYVLEPPTKGKVIVNTTHGPIDIELWPKEAPKSVRNFVQLCLEGYFDDTIFHRVIPGFLVQGGDPTGSGTGGESIY---------------GGVFADEFHSRLRFNHRGIVAMANE------SSPNTNGSQFFFTLDKCDWLDKKHTIFGKVTGDSIFNLLRLGEIDTGKDDRPLDPAPKILSVEVLWNPFEDIVPRVLAKTSNAVAEVKEPPKKPVKKLNLLSFGEEAEEEEKELAAVKQK---------IKSSHDVLNDPRLLKAEATN 244
[Close]
BLAST of NO09G03740 vs. NCBI_GenBank
Match: XP_018468797.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57-like [Raphanus sativus])

HSP 1 Score: 231.1 bits (588), Expect = 1.600e-56
Identity = 124/274 (45.26%), Postives = 159/274 (58.03%), Query Frame = 0 
Query:  489 MSNIYHLEPPTKGKVVLKTSFGPVDIELWPREAPLACRNFVQLALEGYYDHTIFHRVVPGLCVQGGDPTGTGGGGESIYVGAEPGESGHIGKGRGGGFRSEIHTRLKFNHRGILAMANDVAEGGREAKESNRSQFFVTLDACEHLNGKHTIFGKVTGETIYNVLRMGEVGTDREDRPVTPGGELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAAKKDLNLLSFGDXXXXXXXXXXXXXXXXXXXXXXGGLRSVHDVVENNALLKNEAAD 763
            MS IY LEPPTKGKV++ T+ GP+DIELWP+EAP + RNFVQL LEGY+D TIFHRV+PG  VQGGDPTG+G GGESIY               GG F  E H+RL+FNHRGI+AMAN+       +  +N SQFF TLD C+ L+ KHTIFGKVTG++I+N+LR+GE+ T ++DRP+ P  ++                                +   K LNLLSFG+                        ++S HDV+ +  LLK EA +
Sbjct:    1 MSTIYVLEPPTKGKVIVNTTHGPIDIELWPKEAPKSVRNFVQLCLEGYFDDTIFHRVIPGFLVQGGDPTGSGTGGESIY---------------GGVFADEFHSRLRFNHRGIVAMANE------SSPNTNGSQFFFTLDKCDWLDKKHTIFGKVTGDSIFNLLRLGEIDTGKDDRPLDPAPKILSVEVLWNPFEDIVPRVLAKTSNAVAEVKEPPKKPVKKLNLLSFGEEAEEEEKELAAVKQK---------IKSSHDVLNDPRLLKAEATN 244
[Close]
BLAST of NO09G03740 vs. NCBI_GenBank
Match: XP_006282588.1 (peptidyl-prolyl cis-trans isomerase CYP57 [Capsella rubella] >EOA15486.1 hypothetical protein CARUB_v10004633mg [Capsella rubella])

HSP 1 Score: 230.3 bits (586), Expect = 2.800e-56
Identity = 127/284 (44.72%), Postives = 161/284 (56.69%), Query Frame = 0 
Query:  489 MSNIYHLEPPTKGKVVLKTSFGPVDIELWPREAPLACRNFVQLALEGYYDHTIFHRVVPGLCVQGGDPTGTGGGGESIYVGAEPGESGHIGKGRGGGFRSEIHTRLKFNHRGILAMANDVAEGGREAKESNRSQFFVTLDACEHLNGKHTIFGKVTGETIYNVLRMGEVGTDREDRPVTPGGE-LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAAKKDLNLLSFGDXXXXXXXXXXXXXXXXXXXXXXGGLRSVHDVVENNALLKNEAADDVLGLGERK 772
            MS +Y LEPPTKGKV++ T+ GP+D+ELWP+EAP + RNFVQL LEGY+D+TIFHRV+PG  VQGGDPTG+G GG+SIY               GG F  E H+RL+FNHRGI+AMAN        +  SN SQFF TLD C+ L+ KHTIFGKVTG++IYN+LR+GEV T ++DRP+ P  + L                                +   K LNLLSFG+                        ++S HDV+ +  LLK E+ D      E K
Sbjct:    1 MSTVYVLEPPTKGKVIVNTTHGPIDVELWPKEAPKSVRNFVQLCLEGYFDNTIFHRVIPGFLVQGGDPTGSGTGGDSIY---------------GGVFADEFHSRLRFNHRGIVAMAN------ASSPNSNGSQFFFTLDKCDWLDKKHTIFGKVTGDSIYNLLRLGEVDTSKDDRPLDPAPKILSVEVLWNPFEDIVPRVLAKTSQESVAKVKEPPKKPVKKLNLLSFGEEAEEEEKELAVVKQK---------IKSSHDVLNDPRLLKAESTDRERNASESK 254
[Close]
BLAST of NO09G03740 vs. NCBI_GenBank
Match: XP_016496994.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57 isoform X1 [Nicotiana tabacum])

HSP 1 Score: 229.9 bits (585), Expect = 3.600e-56
Identity = 130/286 (45.45%), Postives = 161/286 (56.29%), Query Frame = 0 
Query:  489 MSNIYHLEPPTKGKVVLKTSFGPVDIELWPREAPLACRNFVQLALEGYYDHTIFHRVVPGLCVQGGDPTGTGGGGESIYVGAEPGESGHIGKGRGGGFRSEIHTRLKFNHRGILAMANDVAEGGREAKESNRSQFFVTLDACEHLNGKHTIFGKVTGETIYNVLRMGEVGTDREDRPVTPGGELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRA---AKKDLNLLSFGDXXXXXXXXXXXXXXXXXXXXXXGGLRSVHDVVENNALLKNEAADDVLGLGERK 772
            MS +Y LEPPTKGKVVL T++GP+DIELWP+EAP A RNFVQL LEGYYD+TIFHRV+    VQGGDPTGTG GGESIY               GG F  E H+RL+F HRG++A A      G ++  SN SQFF+TLD C+ L+ KHTIFGKV+G++IYN++ +GEV T ++DRPV P  ++                                 A   A K LNLLSFG+                        +RS HDV+++  LLK E  D  L   E K
Sbjct:    1 MSTVYVLEPPTKGKVVLNTTYGPIDIELWPKEAPKAVRNFVQLCLEGYYDNTIFHRVIKSFLVQGGDPTGTGTGGESIY---------------GGVFPDEFHSRLRFKHRGLVACA------GADSPNSNASQFFMTLDRCDFLDKKHTIFGKVSGDSIYNLITLGEVETGKDDRPVDPPPKILSVEVLWNPFEDIVPRAKLAKALPSEVTTEKKDAKHKATKKLNLLSFGEEAEEEEKELAAVSTR---------IRSSHDVLDDPRLLKEEKHDQALDSNEGK 256
[Close]
BLAST of NO09G03740 vs. NCBI_GenBank
Match: XP_016496995.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57 isoform X2 [Nicotiana tabacum])

HSP 1 Score: 229.9 bits (585), Expect = 3.600e-56
Identity = 130/286 (45.45%), Postives = 161/286 (56.29%), Query Frame = 0 
Query:  489 MSNIYHLEPPTKGKVVLKTSFGPVDIELWPREAPLACRNFVQLALEGYYDHTIFHRVVPGLCVQGGDPTGTGGGGESIYVGAEPGESGHIGKGRGGGFRSEIHTRLKFNHRGILAMANDVAEGGREAKESNRSQFFVTLDACEHLNGKHTIFGKVTGETIYNVLRMGEVGTDREDRPVTPGGELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRA---AKKDLNLLSFGDXXXXXXXXXXXXXXXXXXXXXXGGLRSVHDVVENNALLKNEAADDVLGLGERK 772
            MS +Y LEPPTKGKVVL T++GP+DIELWP+EAP A RNFVQL LEGYYD+TIFHRV+    VQGGDPTGTG GGESIY               GG F  E H+RL+F HRG++A A      G ++  SN SQFF+TLD C+ L+ KHTIFGKV+G++IYN++ +GEV T ++DRPV P  ++                                 A   A K LNLLSFG+                        +RS HDV+++  LLK E  D  L   E K
Sbjct:    1 MSTVYVLEPPTKGKVVLNTTYGPIDIELWPKEAPKAVRNFVQLCLEGYYDNTIFHRVIKSFLVQGGDPTGTGTGGESIY---------------GGVFPDEFHSRLRFKHRGLVACA------GADSPNSNASQFFMTLDRCDFLDKKHTIFGKVSGDSIYNLITLGEVETGKDDRPVDPPPKILSVEVLWNPFEDIVPRAKLAKALPSEVTTEKKDAKHKATKKLNLLSFGEEAEEEEKELAAVSTR---------IRSSHDVLDDPRLLKEEKHDQALDSNEGK 256
[Close]
BLAST of NO09G03740 vs. NCBI_GenBank
Match: XP_016496996.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57 isoform X3 [Nicotiana tabacum])

HSP 1 Score: 229.9 bits (585), Expect = 3.600e-56
Identity = 130/286 (45.45%), Postives = 161/286 (56.29%), Query Frame = 0 
Query:  489 MSNIYHLEPPTKGKVVLKTSFGPVDIELWPREAPLACRNFVQLALEGYYDHTIFHRVVPGLCVQGGDPTGTGGGGESIYVGAEPGESGHIGKGRGGGFRSEIHTRLKFNHRGILAMANDVAEGGREAKESNRSQFFVTLDACEHLNGKHTIFGKVTGETIYNVLRMGEVGTDREDRPVTPGGELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRA---AKKDLNLLSFGDXXXXXXXXXXXXXXXXXXXXXXGGLRSVHDVVENNALLKNEAADDVLGLGERK 772
            MS +Y LEPPTKGKVVL T++GP+DIELWP+EAP A RNFVQL LEGYYD+TIFHRV+    VQGGDPTGTG GGESIY               GG F  E H+RL+F HRG++A A      G ++  SN SQFF+TLD C+ L+ KHTIFGKV+G++IYN++ +GEV T ++DRPV P  ++                                 A   A K LNLLSFG+                        +RS HDV+++  LLK E  D  L   E K
Sbjct:    1 MSTVYVLEPPTKGKVVLNTTYGPIDIELWPKEAPKAVRNFVQLCLEGYYDNTIFHRVIKSFLVQGGDPTGTGTGGESIY---------------GGVFPDEFHSRLRFKHRGLVACA------GADSPNSNASQFFMTLDRCDFLDKKHTIFGKVSGDSIYNLITLGEVETGKDDRPVDPPPKILSVEVLWNPFEDIVPRAKLAKALPSEVTTEKKDAKHKATKKLNLLSFGEEAEEEEKELAAVSTR---------IRSSHDVLDDPRLLKEEKHDQALDSNEGK 256
[Close]
BLAST of NO09G03740 vs. NCBI_GenBank
Match: XP_016496997.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57 isoform X4 [Nicotiana tabacum])

HSP 1 Score: 229.9 bits (585), Expect = 3.600e-56
Identity = 130/286 (45.45%), Postives = 161/286 (56.29%), Query Frame = 0 
Query:  489 MSNIYHLEPPTKGKVVLKTSFGPVDIELWPREAPLACRNFVQLALEGYYDHTIFHRVVPGLCVQGGDPTGTGGGGESIYVGAEPGESGHIGKGRGGGFRSEIHTRLKFNHRGILAMANDVAEGGREAKESNRSQFFVTLDACEHLNGKHTIFGKVTGETIYNVLRMGEVGTDREDRPVTPGGELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRA---AKKDLNLLSFGDXXXXXXXXXXXXXXXXXXXXXXGGLRSVHDVVENNALLKNEAADDVLGLGERK 772
            MS +Y LEPPTKGKVVL T++GP+DIELWP+EAP A RNFVQL LEGYYD+TIFHRV+    VQGGDPTGTG GGESIY               GG F  E H+RL+F HRG++A A      G ++  SN SQFF+TLD C+ L+ KHTIFGKV+G++IYN++ +GEV T ++DRPV P  ++                                 A   A K LNLLSFG+                        +RS HDV+++  LLK E  D  L   E K
Sbjct:    1 MSTVYVLEPPTKGKVVLNTTYGPIDIELWPKEAPKAVRNFVQLCLEGYYDNTIFHRVIKSFLVQGGDPTGTGTGGESIY---------------GGVFPDEFHSRLRFKHRGLVACA------GADSPNSNASQFFMTLDRCDFLDKKHTIFGKVSGDSIYNLITLGEVETGKDDRPVDPPPKILSVEVLWNPFEDIVPRAKLAKALPSEVTTEKKDAKHKATKKLNLLSFGEEAEEEEKELAAVSTR---------IRSSHDVLDDPRLLKEEKHDQALDSNEGK 256
[Close]
BLAST of NO09G03740 vs. NCBI_GenBank
Match: XP_010535890.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP57 [Tarenaya hassleriana])

HSP 1 Score: 229.6 bits (584), Expect = 4.700e-56
Identity = 128/277 (46.21%), Postives = 160/277 (57.76%), Query Frame = 0 
Query:  489 MSNIYHLEPPTKGKVVLKTSFGPVDIELWPREAPLACRNFVQLALEGYYDHTIFHRVVPGLCVQGGDPTGTGGGGESIYVGAEPGESGHIGKGRGGGFRSEIHTRLKFNHRGILAMANDVAEGGREAKESNRSQFFVTLDACEHLNGKHTIFGKVTGETIYNVLRMGEVGTDREDRPVTPGGELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAAK---KDLNLLSFGDXXXXXXXXXXXXXXXXXXXXXXGGLRSVHDVVENNALLKNEAAD 763
            MS +Y LEPPTKGKVV+ T+ GP+DIELWP+EAP A RNFVQL LEGY+D+TIFHRV+PG  VQGGDPTG+G GGESIY               G  F  E H+RL+FNHRGI+AMAN        +  SN SQFF+TLD C+ L+ KHTIFGKVTG++I+N+LR+GEV TD++DRP+ P   +                                   K   K L+LLSFG+                        ++S HDV+ +  LLK+E AD
Sbjct:    1 MSTVYVLEPPTKGKVVVTTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRVIPGFLVQGGDPTGSGTGGESIY---------------GDAFLDEFHSRLRFNHRGIVAMAN------AGSLHSNGSQFFMTLDKCDWLDKKHTIFGKVTGDSIFNLLRLGEVDTDKDDRPLDPVPRILSVEVLWNPFEDIVPRMSAKAADESLATTETKEPRKKGIKKLSLLSFGEEAEEEEKELAAVRQK---------IKSSHDVLNDPRLLKSETAD 247
[Close]
BLAST of NO09G03740 vs. NCBI_GenBank
Match: CAA21215.1 (putative protein [Arabidopsis thaliana] >CAB80023.1 putative protein [Arabidopsis thaliana])

HSP 1 Score: 229.2 bits (583), Expect = 6.200e-56
Identity = 127/284 (44.72%), Postives = 161/284 (56.69%), Query Frame = 0 
Query:  489 MSNIYHLEPPTKGKVVLKTSFGPVDIELWPREAPLACRNFVQLALEGYYDHTIFHRVVPGLCVQGGDPTGTGGGGESIYVGAEPGESGHIGKGRGGGFRSEIHTRLKFNHRGILAMANDVAEGGREAKESNRSQFFVTLDACEHLNGKHTIFGKVTGETIYNVLRMGEVGTDREDRPVTPGGE-LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAAKKDLNLLSFGDXXXXXXXXXXXXXXXXXXXXXXGGLRSVHDVVENNALLKNEAADDVLGLGERK 772
            MS +Y LEPPTKGKV++ T+ GP+D+ELWP+EAP + RNFVQL LEGY+D+TIFHRV+PG  VQGGDPTG+G GG+SIY               GG F  E H+RL+F+HRGI+AMAN        +  SN SQFF TLD C+ L+ KHTIFGKVTG++IYN+LR+GEV T ++DRP+ P  + L                                    K LNLLSFG+                        ++S HDV+ +  LLK EA+D      E K
Sbjct:    1 MSTVYVLEPPTKGKVIVNTTHGPIDVELWPKEAPKSVRNFVQLCLEGYFDNTIFHRVIPGFLVQGGDPTGSGTGGDSIY---------------GGVFADEFHSRLRFSHRGIVAMAN------ASSPNSNGSQFFFTLDKCDWLDKKHTIFGKVTGDSIYNLLRLGEVDTSKDDRPLDPAPKILSVEVLWNPFEDIVPRVLAKTSEESAAEIKEPPTKPVKKLNLLSFGEEAEEEEKELAVVKQK---------IKSSHDVLNDPRLLKAEASDKERNASESK 254
[Close]
BLAST of NO09G03740 vs. NCBI_GenBank
Match: NP_195032.2 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] >Q6Q152.1 RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP57; Short=PPIase CYP57; AltName: Full=Cyclophilin of 57 kDa; AltName: Full=Cyclophilin-57 >AAS75308.1 multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] >ABF57285.1 At4g33060 [Arabidopsis thaliana] >AEE86168.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] >OAP00047.1 hypothetical protein AXX17_AT4G37880 [Arabidopsis thaliana])

HSP 1 Score: 229.2 bits (583), Expect = 6.200e-56
Identity = 127/284 (44.72%), Postives = 161/284 (56.69%), Query Frame = 0 
Query:  489 MSNIYHLEPPTKGKVVLKTSFGPVDIELWPREAPLACRNFVQLALEGYYDHTIFHRVVPGLCVQGGDPTGTGGGGESIYVGAEPGESGHIGKGRGGGFRSEIHTRLKFNHRGILAMANDVAEGGREAKESNRSQFFVTLDACEHLNGKHTIFGKVTGETIYNVLRMGEVGTDREDRPVTPGGE-LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAAKKDLNLLSFGDXXXXXXXXXXXXXXXXXXXXXXGGLRSVHDVVENNALLKNEAADDVLGLGERK 772
            MS +Y LEPPTKGKV++ T+ GP+D+ELWP+EAP + RNFVQL LEGY+D+TIFHRV+PG  VQGGDPTG+G GG+SIY               GG F  E H+RL+F+HRGI+AMAN        +  SN SQFF TLD C+ L+ KHTIFGKVTG++IYN+LR+GEV T ++DRP+ P  + L                                    K LNLLSFG+                        ++S HDV+ +  LLK EA+D      E K
Sbjct:    1 MSTVYVLEPPTKGKVIVNTTHGPIDVELWPKEAPKSVRNFVQLCLEGYFDNTIFHRVIPGFLVQGGDPTGSGTGGDSIY---------------GGVFADEFHSRLRFSHRGIVAMAN------ASSPNSNGSQFFFTLDKCDWLDKKHTIFGKVTGDSIYNLLRLGEVDTSKDDRPLDPAPKILSVEVLWNPFEDIVPRVLAKTSEESAAEIKEPPTKPVKKLNLLSFGEEAEEEEKELAVVKQK---------IKSSHDVLNDPRLLKAEASDKERNASESK 254
The following BLAST results are available for this feature:
BLAST of NO09G03740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_018446879.11.600e-5645.26PREDICTED: peptidyl-prolyl cis-trans isomerase CYP... [more]
XP_018468797.11.600e-5645.26PREDICTED: peptidyl-prolyl cis-trans isomerase CYP... [more]
XP_006282588.12.800e-5644.72peptidyl-prolyl cis-trans isomerase CYP57 [Capsell... [more]
XP_016496994.13.600e-5645.45PREDICTED: peptidyl-prolyl cis-trans isomerase CYP... [more]
XP_016496995.13.600e-5645.45PREDICTED: peptidyl-prolyl cis-trans isomerase CYP... [more]
XP_016496996.13.600e-5645.45PREDICTED: peptidyl-prolyl cis-trans isomerase CYP... [more]
XP_016496997.13.600e-5645.45PREDICTED: peptidyl-prolyl cis-trans isomerase CYP... [more]
XP_010535890.14.700e-5646.21PREDICTED: peptidyl-prolyl cis-trans isomerase CYP... [more]
CAA21215.16.200e-5644.72putative protein [Arabidopsis thaliana] >CAB80023.... [more]
NP_195032.26.200e-5644.72Cyclophilin-like peptidyl-prolyl cis-trans isomera... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR076ncniR076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR056ncniR056Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03740.1NO09G03740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|533980gene_10362Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|569304gene_9709Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101125g1gene3133Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03740.1NO09G03740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03740 ID=NO09G03740|Name=NO09G03740|organism=Nannochloropsis oceanica|type=gene|length=6732bp
ATGAGGCAGGGAGGGAAGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGG
GAGGTTCAGAACACAACAACAGCCGAGgtatcgcagcaatttaggcgagc
gcgacctcacaaggagcaaccttccctccctccctccctccctccctccc
tccctccctccctccttccctcctgaccttgtgtcgatccatcgtctggt
agtcgaagtcgaagcgcttaagctggaggaagaggagagagggaagggct
tggagggtaaggcccttgcgcgcgttttgtggtccgcactgtgggcagcg
gtactaggagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnngagggagaggacggactctcgtctaggcaaggcaatccac
cctcactcgctgacgctacttccctccctccctccctccctccctccctc
agTCCCGAGGAGGACGTGGTGGGTTGCTTTCTGGCCGCCTCGTGCTCCAA
GGTTGTCTGCAACGACCCCTCCGACGCCATCATCCACGAGAGCGCCTCCC
TCAAGgtatagccctcctccccccctcctcctcctcttctctcttactcc
tcctgatcatcctcctcctcttcctactcctccctcttactcctcctcct
cctccctcttcctcctccccctcctccctctcactcctccccctcctccc
tcgtactcctccccctactccatattcctcctctttacatctcctccttt
tctcctcctcctcctcctcatcctcactcctcttcctctgtacccttcct
ccttttcagtctttctcccccctcctccacctggcccctgccctgttgac
atcacactcaccatccctccctccctccctccctccctccctccctccct
ccctcctcccgtccctttagGTCGGCCTGGCCCTGCGGCACGAGCTGCAC
TCCTCCTTCTCTTCCTCCTCCTGGTCTCTCCCTCGGCGATACCTCATCGC
CGATGCCCTCAACCAGCCTCCCTCCGCCGCCCTCCTTCCTTCCCTCCCTC
CCTCCCTCCCGGCGGGTGGCCCCTTGACGGAGGCAGCTGTCGCGCATTTT
GTGGCGTGCATCGTGTACCTCTGGCGGCGgtacggagggagagagggaga
gaaggaaggagggagggagggagggagggagggagggttgttaccctgtg
cctcctgttttctctctgcggctgcggtagtgaagaaaggagaggaggag
ggagggagggagagggaaggcaaaagccgcctggctggcctgtctatctt
ttttatcttcagtgtattctgctttgcgcggctcctcaatcctgtcctcc
ctccctccctccctccctccctccctccctcagGTCTCGCGCGCAAGATC
TTATCGACGCGGAGGCCTCGGGACATGGTCGCCGCCCCTCCCTCCCTCCC
TCCTCCTCTTCCTCCTCCTTCTCTTCCTCCTCCTCCTCCTCCTCGTCAGT
CGACGAGGAGTCATTGAGCGGGGAGGAAGAGGGGGAGGAAGGGAGGGAGG
GAAAGTCGCTCTTTCCGTTTCCAGCCAAGGCGGAAGTAGAAGAAGGAGAA
GAAGAGGAGGAGGAGGAGGAGGACGAGGAGGAGGAGGAGGACGAGGACGA
GGAGGAGATGATGCGGATGGGCTCTTACCATTATCACAACCGACGTCCCG
GGAAAGGAGGGAGACGAAGGAGAGGGACATTTTTCTCGGCTGCGTCCTCC
CTCGCTTCCTCCTCCTCCCCCCCTGCCTCGCCCCTGCCCTCCTCCTCTTC
CTCCTCGTCCCCGCTGCCAGTGTTGTCGAGGAAGGAAGGAGGGGAGGGGG
GGAAGGAGGGGGAGGCGACTCACAGAATAGGCATGGCTCCTGTGCAGCAG
gtagggaagaagggagggagggatatgcgagaggggagaagagggggaag
ggcaccacaatagcacactcgcttgttcattaatgcatgatagttatgta
catccatccatggtccaattacacccccacgcataaacgcgtacattaga
tatcatatattcctaatgtggcgttactatcgttttatttgttctaattg
ttattgtattaccattaagGTGTGGCGTGCTCTTGCCCGGTGCGACAACC
TATGCGGGCGCCTGCTGGGCCAGGCCGTGTCGGGGGAGGGGGTGGGTGTC
AGAGAGTGGCTGTGCTGCCTCGTCACCTTCGGACCTGGACAGGAGgtaca
gaggaagggaggggggaagggagggaggggcagcgagacacagagagggc
tctttgcgttttcgaagggagaggagggcagcaggagataaattttccct
tcatctccttcattcttattctactcctatacatctgtgtgtgcatgtgt
gtgtgggtctctctctctctctctctctctctttctatatatatatatat
atatatatatatatatatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgactatacac
atatttttatctacttctatttacgtctgtatgtaaaggggtacatgcaa
gcataagcaggatttacgtactaacaccatctaattcaatggacttacac
ctaatgtaatggacttacaccttatgtaaaggactcacacctaatccaat
ggactcacgccttatcggtctcacgactgattcaacgggtttgaatcaat
tggatgggctcacatcttattacatttaatgggcttacagGCGCTTGTGG
CGCTTTCCGGAGGCCTCCACCGGAACGACCGGGAACATAACTTCCTACCC
AAGCTCTCAGTCAGTgtacgtctacctccctccctccctcccttcctcct
ttcttccttcttccctccctccctcacccccttctgacctttctcagttt
cttctctgaggttttatttattttcaaacaattgccactccttcctccct
ctctccctccctccctccctcccctagCAATGCCGTCAAGCCCTGGACAC
CCTCTTGGTGCGACAAGAATCCGAATTTCCCACTCTCCGCGAACTTCCCG
AAGTGGAGTTTTGTGCTTCCATGCTAGTATATCTCGACAACCGCCTGACA
AAGGAAGGGAGAGAGGCACAGGAACGAGAGGAAGAGGCTTTGCAGAGGGC
GGCCGAAGGGGGAGAGGGAGGGATGGAGGGAGTGATGGAGGGAGGGAAGG
GAGGGGTGGGGACTTTGCTGAATTTAACGTGTGGCCATAATGCCTCATTC
TCAGAGGGGGAGCGGGCGAAGCTCATGCACCACTTGGCTCAGGGATGGAC
TGTTGAGTCATTCGCAGGGCCgtgagggccttgcttggggaggggaggga
gagaggggaggacatgcgttatgaaagactgtgagaaggaagcgccatca
accaaagcaaaaataaagatactggcaatttgtttcatcctcctgggacg
gtggaagacatatgccgcatttcctttacacaaagtgagaggggggtagg
gaggttcacgaacgtcagatgacaccatgccctgccttatccatcccaac
cccaatcacacctcataccactgcgctgctcccccacgtatcctcaggac
ggagggacgtttaccgtcgtcagtgtctattcagactcctgccccttgaa
gcctcttctattgtcctgcattggtaaactcatctcttccccgtacccct
cgctcgttcccccctttccaccatcattcacacagGGCCTCGCGCGCCAT
GTCCAACATCTACCACTTGGAGCCCCCGACCAAGGGGAAGGTCGTCTTGA
AGACGTCCTTCGGGCCTGTCGACATTGAGCTGTGGCCACGCGAAGCACCA
TTGGCATGCAGgtgggtagaaattgattccaagaaagcgagaggaaaaag
gggcgatgggatggtgcggtgaggccgcctctgttgcctccatctctcct
tccctccctccctccacagtgaatcattgctgtctttcgtgctcattttg
catctcacatcgcttaaccacccacctagtcccacttctggccaatgcat
cgtctatcattctctgagacaatcccaccctccctccctcccacactccc
ttctccctcccagAAATTTCGTCCAGCTCGCATTGGAAGGGTACTACGAC
CACACTATCTTCCATCGCGTCGTGCCTGGTCTGTGCGTGCAAGGCGGGGA
CCCGACGGGGACAGGCGGAGGAGGGGAGAGCATTTATGTCGGCGCCGAAC
CAGGGGAGAGCGGGCATATAGGCAAGGGGAGGGGAGGCGGCTTTCGGTCT
GAGATCCACACAAGACTTAAATTTAACCACCGAGGCATCCTGGCCATGGC
GAACGACGTGGCGGAAGGCGGGAGGGAGGCGAAGGAGAGTAATCGCAGCC
AGTTCTTTGTAACGCTCGACGCGTGCGAGCACTTGAATGGGAAGCACACG
ATCTTCGGAAAAGTGACCGGGGAGACCATTTACAACGTACTGAGGATGGG
AGAGGTGGGCACGGACAGAGAGGATCGGCCTGTGACGCCGgtaaagctgg
aggcagtggaggtgttgatgaatccgtttgatgacattgtgccgagggat
agGGGGGGGAATTGAGGAAGAGGAGGGAGGAAGGGAGGGAGGGCCCGGGC
GGGGGGGAGGAGGAGGAGGAGAGGAGGAGGGTGGAGAAGAAGAGGCAGGA
AAGGTTGGGAAGGGCGGCGAAGAAAGACTTGAATTTATTGTCGTTTGGCG
ATGATGAGGGAGAGGATGAGAATGAGGAGGAGGAGGAGGGAGCGAGGGAG
CGAGGGAGGAAGAGGAAGGGGGGATTGAGAAGTGTTCATGATGTGGTTGA
GAATAATGCTCTTTTAAAGAATGAAGCGGCTGATGATGTTTTAGGGCTGG
GAGAAAGGAAGGAGGAGGAAGAAGAGGAGGAGGAGGAAGAGAAAAAGAGG
AGGAAAACTGCTCGTGGAGATGGAAGGGAGAGAGGGAAGGAGGGAGGGAA
GGAAGGAGGAAAGGAGGGCAGCAGCAAAAGCATCACCAGAGGGAGTTCAA
CGAAGGAGGAGGAGGAGGAGGAGGAGGAGGGCGGGGTGGGCGGTGATGTG
ACCCTCCCCGGGGTGGATGATGAGGCTGCGGTCTTTGCGGCGCGGATGCG
GGCCAGGTTGCAACAGCGGAACAAGCAGCACAAAACGCATGGGAAGGAGG
AGAAAAGGGAGGAGGAGGGAGGGAGAGAGGGGGGGAATGGCCTGCGGGAG
ACGTACGAAGATGTCCGAGCTGCAGAAGCGGCAGAGGCACAGGCGCGTCT
GGTGAAAGAGAAAGCGGCGGAGTTCCGAAGGCTCAAGGCTGAGGTGCTGG
GAAGGGGGGGGGGGGGAGGGGTAAAGGTATCGGCGGCCGTGGCGGTGGAT
ACGGGGGAGGGTGCGAGGAGGAAGAGGGAGGAGGAGGGGTTGAAGGAAAT
GCTGACACCCCTGGAGATGAGGCGCCGGAAGTACTTGGAAAAGAGAAGGG
GGGGGGAGCGAGCAGGTAGgtagggaaggagggagggagggagggaggga
gggagggagggcggaagggaacttgaggaggatggaagggaaatcgttgg
tcacaacgaatctttctcacgaccccaatctccacacccacaggcaccct
catcagagctacacaaatactcatacatagacatacccacccatacacac
actcacacacatccacccacccacacccatccacacccactcacacactc
atacatcgacccacccacccacccacccacacccacacacccatacacac
acacacacacacaaacacacacatacacacacattcacacacacacacac
attcacacacacaaacccacacacacattcacacacacacacacttacac
acacacatacacacacacacacacacacacacccacacacacacacacac
acacacacacacacacacacacacccacacacatccacccacccacaccc
actcacacccacccacacccacacacccacacacacacacacacacacac
acacacacacacacacacccacacacccacccacccacacacactcacac
acacacacacccacacacccacacacatacacatacacacttcacaccca
cacacacccacacacccacacacactcacacacacactcacacacacaca
catatatatatatattcatatatatatatgtagggaggaggcaaccctat
cgaagctctcctccttctccagCGGTCTCTTGGCCAAGCGGAAGGAACAA
AGCAGCCACAAGCCGAAGAAGGAGGGGGAGGAGGAGGAAGGGAAGGAGGA
GGCCTACCATGGGCAGGTGACGCAGAAGAAGGACATTTTGGACGGGGGGG
AGGAAGGGGAGGATGACGAGGGATGGTTTGTGGGGGGGTTGAAGTTTCGT
CGGCATGTGGATGACGCATTTAGAGGCGGAGATGGGAGAGAGGTGGATGG
ATACGTGACAGTGGTGCCGGGGAGGGGGGGGGGAGGGAGGGGGGGAGGGA
AGGGAGGGAGTGGCGACGTGAAGAGGGAATAA
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protein sequence of NO09G03740.1

>NO09G03740.1-protein ID=NO09G03740.1-protein|Name=NO09G03740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1077bp
MRQGGKEGGREEGREGGRFRTQQQPSPEEDVVGCFLAASCSKVVCNDPSD
AIIHESASLKVGLALRHELHSSFSSSSWSLPRRYLIADALNQPPSAALLP
SLPPSLPAGGPLTEAAVAHFVACIVYLWRRSRAQDLIDAEASGHGRRPSL
PPSSSSSSFSSSSSSSSSVDEESLSGEEEGEEGREGKSLFPFPAKAEVEE
GEEEEEEEEDEEEEEDEDEEEMMRMGSYHYHNRRPGKGGRRRRGTFFSAA
SSLASSSSPPASPLPSSSSSSSPLPVLSRKEGGEGGKEGEATHRIGMAPV
QQVWRALARCDNLCGRLLGQAVSGEGVGVREWLCCLVTFGPGQEALVALS
GGLHRNDREHNFLPKLSVSQCRQALDTLLVRQESEFPTLRELPEVEFCAS
MLVYLDNRLTKEGREAQEREEEALQRAAEGGEGGMEGVMEGGKGGVGTLL
NLTCGHNASFSEGERAKLMHHLAQGWTVESFAGPASRAMSNIYHLEPPTK
GKVVLKTSFGPVDIELWPREAPLACRNFVQLALEGYYDHTIFHRVVPGLC
VQGGDPTGTGGGGESIYVGAEPGESGHIGKGRGGGFRSEIHTRLKFNHRG
ILAMANDVAEGGREAKESNRSQFFVTLDACEHLNGKHTIFGKVTGETIYN
VLRMGEVGTDREDRPVTPGGELRKRREEGREGPGGGEEEEERRRVEKKRQ
ERLGRAAKKDLNLLSFGDDEGEDENEEEEEGARERGRKRKGGLRSVHDVV
ENNALLKNEAADDVLGLGERKEEEEEEEEEEKKRRKTARGDGRERGKEGG
KEGGKEGSSKSITRGSSTKEEEEEEEEGGVGGDVTLPGVDDEAAVFAARM
RARLQQRNKQHKTHGKEEKREEEGGREGGNGLRETYEDVRAAEAAEAQAR
LVKEKAAEFRRLKAEVLGRGGGGGVKVSAAVAVDTGEGARRKREEEGLKE
MLTPLEMRRRKYLEKRRGGERAGSGLLAKRKEQSSHKPKKEGEEEEGKEE
AYHGQVTQKKDILDGGEEGEDDEGWFVGGLKFRRHVDDAFRGGDGREVDG
YVTVVPGRGGGGRGGGKGGSGDVKRE*
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Synonyms
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