NO09G03570, NO09G03570 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G03570
Unique Name	NO09G03570
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4804
Alignment location	chr9:1023800..1028603 -

Link to JBrowse

Properties


Property Name	Value
Description	ATPase ASNA1 homolog

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:1023800..1028603 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0016887	ATPase activity
GO:0016787	hydrolase activity
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR027542	ATPase_ArsA/GET3_euk
IPR016300	ATPase_ArsA/GET3
IPR025723	Anion-transp_ATPase-like_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0016043	cellular component organization

Vocabulary: **Cellular Component**
Term	Definition
GO:0005783	endoplasmic reticulum

Homology

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BLAST of NO09G03570 vs. NCBI_GenBank
Match: EWM27451.1 (anion-transporting atpase [Nannochloropsis gaditana])

HSP 1 Score: 626.3 bits (1614), Expect = 6.400e-176
Identity = 314/362 (86.74%), Postives = 335/362 (92.54%), Query Frame = 0

Query:   37 SAATAVKVETEEEEFPEASLRNIIESDLKWVFVGGKGGVGKTTTSCCLAIQLAKVRQSVLIISTDPAHNLSDAFGQKFGKDPGKVDGFDNLFVMEIDPSFDWEEMNAMVAQSGSIPGAE-EGGGLQSMLQDLTSSIPGIDEIISFAELMKQVEKMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKLMALKNKFSXXXXXXXXXXXXPPGAEDALMSKLDQTRDTIEKVNRQFRDPNATTFVCVCIAEFLSIYETERLVQELAKFEIDSHNIVVNQVLFPDKDAAEMTAWHEKTKSSLPAEANEIISKFLARKKMQDKYINQVFDLYEDFHVVLMPLLDQEVRGVESLRRFSEALLTPPDEK 398
            +A  A     EE++FPEASLRNIIESDLKW+FVGGKGGVGKTTTSCCLAIQLAKVR+SVLIISTDPAHNLSDAFGQKFGK+PGKVDGF+NLFVMEIDPSFDWEEMNAMVA+SGSIPGAE EGGGLQSMLQ+LTSSIPGIDEIISFAELMKQVE+MDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGK+MA KNKFS            PPGAEDAL+ KLDQTRDTIEKVN+QFRDP ATTFVCVCIAEFLSIYETERLVQELAKFEID+HNIVVNQVLFPDKDA EM+AWHEKTK++LP EANEIISKFLARK+MQDKYINQVFDLYEDFHVVLMPLLD EVRGV+SLRRFSEALLTPP+ +
Sbjct:    9 AAVVAKNDGMEEDDFPEASLRNIIESDLKWIFVGGKGGVGKTTTSCCLAIQLAKVRESVLIISTDPAHNLSDAFGQKFGKEPGKVDGFENLFVMEIDPSFDWEEMNAMVARSGSIPGAEGEGGGLQSMLQELTSSIPGIDEIISFAELMKQVEQMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKIMAFKNKFSGLMSQFGGMMGQPPGAEDALLGKLDQTRDTIEKVNKQFRDPQATTFVCVCIAEFLSIYETERLVQELAKFEIDTHNIVVNQVLFPDKDATEMSAWHEKTKATLPGEANEIISKFLARKRMQDKYINQVFDLYEDFHVVLMPLLDHEVRGVKSLRRFSEALLTPPENE 370

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BLAST of NO09G03570 vs. NCBI_GenBank
Match: OEU16153.1 (anion-transporting ATPase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 426.0 bits (1094), Expect = 1.300e-115
Identity = 219/356 (61.52%), Postives = 266/356 (74.72%), Query Frame = 0

Query:   45 ETEEEEFPEASLRNIIES-DLKWVFVGGKGGVGKTTTSCCLAIQLAKVRQSVLIISTDPAHNLSDAFGQKFGKDPGKVDGFDNLFVMEIDPSFDWEEMNAMVAQSGSIPGAEEGGGLQSMLQDLTSSIPGIDEIISFAELMKQVEKMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKLMALKNKFS---XXXXXXXXXXXXPPGAEDALMSKLDQTRDTIEKVNRQFRDPNATTFVCVCIAEFLSIYETERLVQELAKFEIDSHNIVVNQVLFPDKDAAEMTAWHEKTKSSLPAEANEIISKFLARKKMQDKYINQVFDLY-EDFHVVLMPLLDQEVRGVESLRRFSEALLTPPD 396
            + ++ + PE SL+NII+   L+WVFVGGKGGVGKTTTSCCL IQLAK R+ VLI+STDPAHNLSDAF QK G++P  ++GF NL  MEID + D EEM   + + G+    E+ GGL SM+ +LT+SIPGIDE +SF+ELMKQV+ +D+  VVFDTAPTGHTLRLLSFP+ LE A GK+M LK++F                P   +DA++ +L++TR  I KVN  F+DP  TTFVCVCI EFLSIYETERLVQEL+KF ID+HNIVVNQVLFP+KDA E++ W+E  K +LP EA EI  K L+RK+MQDKYI Q FDLY EDFHV LMPLLD EVRGVE L+ FSE L  P D
Sbjct:    6 DIDDADLPEPSLKNIIDQHSLQWVFVGGKGGVGKTTTSCCLGIQLAKTRKKVLIVSTDPAHNLSDAFCQKIGREPTPIEGFHNLSAMEIDANNDMEEMQRNMEEQGA--DDEKDGGLSSMMSELTNSIPGIDEAMSFSELMKQVQSLDFDVVVFDTAPTGHTLRLLSFPTILEKALGKVMELKDRFGGLIGQATAMMGGGNNPGATQDAIVGRLEETRVVINKVNDAFQDPALTTFVCVCIPEFLSIYETERLVQELSKFGIDTHNIVVNQVLFPEKDAEELSEWYEGNKDTLPTEAREICGKMLSRKRMQDKYIGQCFDLYGEDFHVSLMPLLDYEVRGVEKLKGFSEFLTNPVD 359

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BLAST of NO09G03570 vs. NCBI_GenBank
Match: XP_002183697.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44879.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 408.7 bits (1049), Expect = 2.100e-110
Identity = 212/354 (59.89%), Postives = 259/354 (73.16%), Query Frame = 0

Query:   47 EEEEFPEASLRNII-ESDLKWVFVGGKGGVGKTTTSCCLAIQLAKVRQSVLIISTDPAHNLSDAFGQKFGKDPGKVDGFDNLFVMEIDPSFDWEEMNAMVAQSGSIPGAEEGGGLQSMLQDLTSSIPGIDEIISFAELMKQVEKMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKLMALKNKFS---XXXXXXXXXXXXPPGAEDALMSKLDQTRDTIEKVNRQFRDPNATTFVCVCIAEFLSIYETERLVQELAKFEIDSHNIVVNQVLFPDKDAAEMTAWHEKTKSSLPAEANEIISKFLARKKMQDKYINQVFDLY-EDFHVVLMPLLDQEVRGVESLRRFSEALLTPPD 396
            ++ + P+ SL+NII ++ L+WVFVGGKGGVGKTTTSCCL +QLAK R  VL++STDPAHNLSDAF QK G++P  + GFDNL  MEID S + E           I   ++      M  DL +SIPGIDE +SF+ELMKQV+++D+  VVFDTAPTGHTLRLLSFP+ LE AF K+  LK++F                P  A++ L+ KL++TR  I KVN+ F+DP  TTFVCVCI EFLSIYETERLVQEL+K+ IDSHNIVVNQVLFP+KDA E++AW+E   ++LP EA EI SK LARK+MQDKYI Q FDLY +DFHVVLMPLLD EVRGVE L+ FSE L+ P D
Sbjct:    2 DDLDLPDPSLKNIIDQTTLQWVFVGGKGGVGKTTTSCCLGVQLAKSRTKVLLVSTDPAHNLSDAFCQKIGREPTPIHGFDNLCAMEIDASQEAE---------SEIEATDDNDVFGQMFNDLQNSIPGIDEAMSFSELMKQVQQLDFDVVVFDTAPTGHTLRLLSFPTILEKAFAKVWELKDRFGGLIGQATALMSGGNNPAAAQEQLLGKLEETRAVINKVNQAFQDPTKTTFVCVCIPEFLSIYETERLVQELSKYGIDSHNIVVNQVLFPEKDAEELSAWYEANGATLPKEAREICSKLLARKRMQDKYIGQCFDLYGDDFHVVLMPLLDYEVRGVEKLKTFSELLVDPVD 346

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BLAST of NO09G03570 vs. NCBI_GenBank
Match: GAX23780.1 (arsenite-transporting ATPase [Fistulifera solaris])

HSP 1 Score: 406.4 bits (1043), Expect = 1.000e-109
Identity = 212/357 (59.38%), Postives = 260/357 (72.83%), Query Frame = 0

Query:   45 ETEEEEFPEASLRNII-ESDLKWVFVGGKGGVGKTTTSCCLAIQLAKVRQSVLIISTDPAHNLSDAFGQKFGKDPGKVDGFDNLFVMEIDPSFDWEEMNAMVAQSGSIPGAEEGGGL-QSMLQDLTSSIPGIDEIISFAELMKQVEKMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKLMALKNKFS---XXXXXXXXXXXXPPGAEDALMSKLDQTRDTIEKVNRQFRDPNATTFVCVCIAEFLSIYETERLVQELAKFEIDSHNIVVNQVLFPDKDAAEMTAWHEKTKSSLPAEANEIISKFLARKKMQDKYINQVFDLY-EDFHVVLMPLLDQEVRGVESLRRFSEALLTPPD 396
            E ++ + P+ SL+NII ++ L+WVFVGGKGGVGKTTTSCCL +QLA  R+ VL++STDPAHNLSDAF QK G++P  ++GFDNL  MEID S +          +  I  AE+   +   M  DL +SIPGIDE +SF+ELMKQV+++D+  VVFDTAPTGHTLRLLSFP+ LE AF K+  LK++F                P  A++ ++ KL++TR  I KVN QF+DP  TTFVCVCI EFLSIYETERLVQEL+K+ IDSHNIVVNQVLFP+KDA E++ W+E   S LP EA EI SK LARK+MQDKYI Q FDLY +DFHV LMPLLD EVRGVE L+ FSE L+ P D
Sbjct:    5 EIDDADLPDPSLKNIIDQTTLQWVFVGGKGGVGKTTTSCCLGVQLAMSRKKVLLVSTDPAHNLSDAFCQKIGREPTPINGFDNLCAMEIDASQE---------VASEIDSAEDENDIFNQMFSDLQNSIPGIDEAMSFSELMKQVQQLDFDVVVFDTAPTGHTLRLLSFPTILEKAFAKVWELKDRFGGLIGQATALMSGGNNPAAAQEQMLGKLEETRAVIAKVNAQFQDPAKTTFVCVCIPEFLSIYETERLVQELSKYGIDSHNIVVNQVLFPEKDAEELSEWYEANASGLPKEAQEICSKMLARKRMQDKYIGQCFDLYGDDFHVTLMPLLDHEVRGVEKLKPFSELLVNPVD 352

[Close]

BLAST of NO09G03570 vs. NCBI_GenBank
Match: GAX14939.1 (arsenite-transporting ATPase [Fistulifera solaris])

HSP 1 Score: 406.0 bits (1042), Expect = 1.400e-109
Identity = 212/357 (59.38%), Postives = 260/357 (72.83%), Query Frame = 0

Query:   45 ETEEEEFPEASLRNII-ESDLKWVFVGGKGGVGKTTTSCCLAIQLAKVRQSVLIISTDPAHNLSDAFGQKFGKDPGKVDGFDNLFVMEIDPSFDWEEMNAMVAQSGSIPGAEEGGGL-QSMLQDLTSSIPGIDEIISFAELMKQVEKMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKLMALKNKFS---XXXXXXXXXXXXPPGAEDALMSKLDQTRDTIEKVNRQFRDPNATTFVCVCIAEFLSIYETERLVQELAKFEIDSHNIVVNQVLFPDKDAAEMTAWHEKTKSSLPAEANEIISKFLARKKMQDKYINQVFDLY-EDFHVVLMPLLDQEVRGVESLRRFSEALLTPPD 396
            E ++ + P+ SL+NII ++ L+WVFVGGKGGVGKTTTSCCL +QLA  R+ VL++STDPAHNLSDAF QK G++P  ++GFDNL  MEID S +          +  I  AE+   +   M  DL +SIPGIDE +SF+ELMKQV+++D+  VVFDTAPTGHTLRLLSFP+ LE AF K+  LK++F                P  A++ ++ KL++TR  I KVN QF+DP  TTFVCVCI EFLSIYETERLVQEL+K+ IDSHNIVVNQVLFP+KDA E++ W+E   S LP EA EI SK LARK+MQDKYI Q FDLY +DFHV LMPLLD EVRGVE L+ FSE L+ P D
Sbjct:    5 EIDDADLPDPSLKNIIDQTTLQWVFVGGKGGVGKTTTSCCLGVQLAMSRKKVLLVSTDPAHNLSDAFCQKIGREPTPINGFDNLCAMEIDASQE---------VASEIDSAEDENDIFNQMFSDLQNSIPGIDEAMSFSELMKQVQQLDFDVVVFDTAPTGHTLRLLSFPTILEKAFAKVWELKDRFGGLIGQATALMSGGNNPAAAQEHMLGKLEETRAVIAKVNAQFQDPAKTTFVCVCIPEFLSIYETERLVQELSKYGIDSHNIVVNQVLFPEKDAEELSEWYEANASGLPKEAQEICSKMLARKRMQDKYIGQCFDLYGDDFHVTLMPLLDHEVRGVEKLKPFSELLVNPVD 352

[Close]

BLAST of NO09G03570 vs. NCBI_GenBank
Match: OWZ07292.1 (Arsenite-Antimonite Effluxprotein [Phytophthora megakarya])

HSP 1 Score: 402.9 bits (1034), Expect = 1.200e-108
Identity = 209/347 (60.23%), Postives = 256/347 (73.78%), Query Frame = 0

Query:   48 EEEFPEASLRNII-ESDLKWVFVGGKGGVGKTTTSCCLAIQLAKVRQSVLIISTDPAHNLSDAFGQKFGKDPGKVDGFDNLFVMEIDPSFDWEEMNAMVAQSGSIPGAEEGGGLQSMLQDLTSSIPGIDEIISFAELMKQVEKMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKLMALKNKFSXXXXXXXXXXXXPPGAEDALMSKLDQTRDTIEKVNRQFRDPNATTFVCVCIAEFLSIYETERLVQELAKFEIDSHNIVVNQVLFPDKDAAEMTAWHEKTKSSLPAEANEIISKFLARKKMQDKYINQVFDLYEDFHVVLMPLLDQEVRGVESLRRFSEALLTP 394
            E + PEASLRN++ +  L+W+FVGGKGGVGKTTTSCCLAIQLA  R+ VLI+STDPAHNLSDAFGQKF ++P  V+GF NL VMEIDP+ D EEMNA         G ++  G+ S ++DLT+SIPGIDE +SFAELMKQV+ MDYS +VFDTAPTGHTLRLLSFP+ L+ AF K+++LKN+FS               +++ L+ KL+QTR+ I+KVN QF+DP  TTFVCVCI EFLS+YETERLVQEL K+EID HN+VVNQVL+P+                   E +E  S   AR+KMQ KYI+Q++DLYEDFHVV MPLL +EVRGV SL+ FSE LL P
Sbjct:    3 EVDVPEASLRNLVAQKSLQWIFVGGKGGVGKTTTSCCLAIQLAAQREKVLIVSTDPAHNLSDAFGQKFTREPTPVNGFSNLAVMEIDPNVDLEEMNA--------DGVQDNSGMASFMKDLTNSIPGIDEAMSFAELMKQVQNMDYSVIVFDTAPTGHTLRLLSFPTALDKAFDKILSLKNQFSGMFSQVSALLGGALPSQEMLLGKLEQTREVIQKVNAQFKDPERTTFVCVCIPEFLSLYETERLVQELTKYEIDVHNVVVNQVLYPE-------------------EGSECKS-CSARQKMQQKYIDQIYDLYEDFHVVEMPLLTEEVRGVPSLKAFSENLLAP 321

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BLAST of NO09G03570 vs. NCBI_GenBank
Match: XP_008889650.1 (hypothetical protein PPTG_00036 [Phytophthora parasitica INRA-310] >ETI57666.1 hypothetical protein F443_00052 [Phytophthora parasitica P1569] >ETK97394.1 hypothetical protein L915_00048 [Phytophthora parasitica] >ETL50735.1 hypothetical protein L916_00047 [Phytophthora parasitica] >ETM03768.1 hypothetical protein L917_00038 [Phytophthora parasitica] >ETM57079.1 hypothetical protein L914_00038 [Phytophthora parasitica] >ETN23435.1 hypothetical protein PPTG_00036 [Phytophthora parasitica INRA-310] >ETO86410.1 hypothetical protein F444_00045 [Phytophthora parasitica P1976] >ETP27427.1 hypothetical protein F441_00048 [Phytophthora parasitica CJ01A1] >ETP55407.1 hypothetical protein F442_00042 [Phytophthora parasitica P10297])

HSP 1 Score: 402.1 bits (1032), Expect = 2.000e-108
Identity = 207/348 (59.48%), Postives = 252/348 (72.41%), Query Frame = 0

Query:   47 EEEEFPEASLRNII-ESDLKWVFVGGKGGVGKTTTSCCLAIQLAKVRQSVLIISTDPAHNLSDAFGQKFGKDPGKVDGFDNLFVMEIDPSFDWEEMNAMVAQSGSIPGAEEGGGLQSMLQDLTSSIPGIDEIISFAELMKQVEKMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKLMALKNKFSXXXXXXXXXXXXPPGAEDALMSKLDQTRDTIEKVNRQFRDPNATTFVCVCIAEFLSIYETERLVQELAKFEIDSHNIVVNQVLFPDKDAAEMTAWHEKTKSSLPAEANEIISKFLARKKMQDKYINQVFDLYEDFHVVLMPLLDQEVRGVESLRRFSEALLTP 394
            E  + PEASLRN++ +  L+W+FVGGKGGVGKTTTSCCLAIQLA  R+ VLI+STDPAHNLSDAFGQKF ++P  V+GF NL VMEIDP+ D EEMNA         G ++  G+ S ++DLT+SIPGIDE +SFAELMKQV+ MDYS +VFDTAPTGHTLRLLSFP+ L+ AF K+++LKN+FS               +++ L+ KL+QTR+ I+KVN QF+DP  TTFVCVCI EFLS+YETERLVQEL K+EID HN+VVNQVL+P                    E         AR+KMQ KYI+Q++DLYEDFHVV MPLL +EVRGV SL+ FSE LL P
Sbjct:    4 EVVDVPEASLRNLVAQKSLQWIFVGGKGGVGKTTTSCCLAIQLAAQREKVLIVSTDPAHNLSDAFGQKFTREPTPVNGFSNLAVMEIDPNVDLEEMNA--------DGVQDNSGMASFMKDLTNSIPGIDEAMSFAELMKQVQNMDYSVIVFDTAPTGHTLRLLSFPTALDKAFDKILSLKNQFSGMFSQVSALLGGALPSQEMLLGKLEQTREVIQKVNAQFKDPERTTFVCVCIPEFLSLYETERLVQELTKYEIDVHNVVVNQVLYP--------------------EEGSTCKSCSARQKMQQKYIDQIYDLYEDFHVVEMPLLTEEVRGVPSLKAFSENLLAP 323

[Close]

BLAST of NO09G03570 vs. NCBI_GenBank
Match: XP_002288762.1 (anion-transporting ATPase [Thalassiosira pseudonana CCMP1335] >EED94198.1 anion-transporting ATPase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 402.1 bits (1032), Expect = 2.000e-108
Identity = 210/353 (59.49%), Postives = 256/353 (72.52%), Query Frame = 0

Query:   47 EEEEFPEASLRNIIESD-LKWVFVGGKGGVGKTTTSCCLAIQLAKVRQSVLIISTDPAHNLSDAFGQKFGKDPGKVDGFDNLFVMEIDPSFDWEEMNAMVAQSGSIPGAEEGGGLQSMLQDLTSSIPGIDEIISFAELMKQVEKMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKLMALKNKFS--XXXXXXXXXXXXPPGAEDALMSKLDQTRDTIEKVNRQFRDPNATTFVCVCIAEFLSIYETERLVQELAKFEIDSHNIVVNQVLFPDKDAAEMTAWHEKTKSSLPAEANEIISKFLARKKMQDKYINQVFDLY-EDFHVVLMPLLDQEVRGVESLRRFSEALLTPPD 396
            ++E+ P+ SL+NI+E + L+W+FVGGKGGVGKTTTSCCL  QLAK R+ VLI+STDPAHNLSDAF QK G++P  + GF NL  MEID + D ++M   +  +      ++  G+QS++ +LT+SIPGIDE +SF+ELMKQV+ MDY  VVFDTAPTGHTLRLLSFP+ LE AFGKLM LK++F               P   + AL+ +L++TR+ I KVN  F+DP  TTFVCVCI EFLSIYETERLVQEL+KF IDSHNIVVNQVLFP+KDA E                 EI SK +ARK+MQDKYI Q FDLY +DFHVVLMPLLD EVRGVE L+ FSE L+ P D
Sbjct:    8 DDEDLPDPSLKNILEQESLQWIFVGGKGGVGKTTTSCCLGTQLAKHRKKVLIVSTDPAHNLSDAFCQKIGREPTPIQGFTNLSAMEIDATEDLDKMQRSMEDATGAGSDDDASGIQSLMTELTNSIPGIDEAMSFSELMKQVQNMDYDVVVFDTAPTGHTLRLLSFPTILEKAFGKLMDLKDRFGGLIGQASALFGGGSPDQVQAALLGRLEETREIINKVNTAFQDPALTTFVCVCIPEFLSIYETERLVQELSKFGIDSHNIVVNQVLFPEKDAEE-----------------EICSKMMARKRMQDKYIGQCFDLYGDDFHVVLMPLLDHEVRGVEKLKDFSELLINPID 343

[Close]

BLAST of NO09G03570 vs. NCBI_GenBank
Match: KUF79504.1 (ATPase GET3 [Phytophthora nicotianae])

HSP 1 Score: 402.1 bits (1032), Expect = 2.000e-108
Identity = 210/360 (58.33%), Postives = 257/360 (71.39%), Query Frame = 0

Query:   36 MSAATAVKVETEE-EEFPEASLRNII-ESDLKWVFVGGKGGVGKTTTSCCLAIQLAKVRQSVLIISTDPAHNLSDAFGQKFGKDPGKVDGFDNLFVMEIDPSFDWEEMNAMVAQSGSIPGAEEGGGLQSMLQDLTSSIPGIDEIISFAELMKQVEKMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKLMALKNKFSXXXXXXXXXXXXPPGAEDALMSKLDQTRDTIEKVNRQFRDPNATTFVCVCIAEFLSIYETERLVQELAKFEIDSHNIVVNQVLFPDKDAAEMTAWHEKTKSSLPAEANEIISKFLARKKMQDKYINQVFDLYEDFHVVLMPLLDQEVRGVESLRRFSEALLTP 394
            M    A K  ++E  + PEASLRN++ +  L+W+FVGGKGGVGKTTTSCCLAIQLA  R+ VLI+STDPAHNLSDAFGQKF ++P  V+GF NL VMEIDP+ D EEMNA         G ++  G+ S ++DLT+SIPGIDE +SFAELMKQV+ MDYS +VFDTAPTGHTLRLLSFP+ L+ AF K+++LKN+FS               +++ L+ KL+QTR+ I+KVN QF+DP  TTFVCVCI EFLS+YETERLVQEL K+EID HN+VVNQVL+P                    E         AR+KMQ KYI+Q++DLYEDFHVV MPLL +EVRGV SL+ FSE LL P
Sbjct:    1 MEVDIAAKTMSDEVVDVPEASLRNLVAQKSLQWIFVGGKGGVGKTTTSCCLAIQLAAQREKVLIVSTDPAHNLSDAFGQKFTREPTPVNGFSNLAVMEIDPNVDLEEMNA--------DGVQDNSGMASFMKDLTNSIPGIDEAMSFAELMKQVQNMDYSVIVFDTAPTGHTLRLLSFPTALDKAFDKILSLKNQFSGMFSQVSALLGGALPSQEMLLGKLEQTREVIQKVNAQFKDPERTTFVCVCIPEFLSLYETERLVQELTKYEIDVHNVVVNQVLYP--------------------EEGSTCKSCSARQKMQQKYIDQIYDLYEDFHVVEMPLLTEEVRGVPSLKAFSENLLAP 332

[Close]

BLAST of NO09G03570 vs. NCBI_GenBank
Match: POM76215.1 (Arsenite-Antimonite (ArsAB) Efflux Family [Phytophthora palmivora var. palmivora])

HSP 1 Score: 402.1 bits (1032), Expect = 2.000e-108
Identity = 207/348 (59.48%), Postives = 253/348 (72.70%), Query Frame = 0

Query:   47 EEEEFPEASLRNII-ESDLKWVFVGGKGGVGKTTTSCCLAIQLAKVRQSVLIISTDPAHNLSDAFGQKFGKDPGKVDGFDNLFVMEIDPSFDWEEMNAMVAQSGSIPGAEEGGGLQSMLQDLTSSIPGIDEIISFAELMKQVEKMDYSTVVFDTAPTGHTLRLLSFPSTLEGAFGKLMALKNKFSXXXXXXXXXXXXPPGAEDALMSKLDQTRDTIEKVNRQFRDPNATTFVCVCIAEFLSIYETERLVQELAKFEIDSHNIVVNQVLFPDKDAAEMTAWHEKTKSSLPAEANEIISKFLARKKMQDKYINQVFDLYEDFHVVLMPLLDQEVRGVESLRRFSEALLTP 394
            +E + PEASLRN++    L+W+FVGGKGGVGKTTTSCCLAIQLA  R+ VLI+STDPAHNLSDAFGQKF ++P  V+GF NL VMEIDP+ D EEMNA         G ++  G+ S ++DLT+SIPGIDE +SFAELMKQV+ MDYS +VFDTAPTGHTLRLLSFP+ L+ AF K+++LKN+FS               +++ L+ KL+QTR+ I+KVN QF+DP+ TTFVCVCI EFLS+YETERLVQEL K+EID HN+VVNQVL+P                    E         AR+KMQ KYI+Q++DLYEDFHVV MPLL +EVRGV SL+ FSE LL P
Sbjct:    3 DEVDVPEASLRNLVAHKSLQWIFVGGKGGVGKTTTSCCLAIQLAAQREKVLIVSTDPAHNLSDAFGQKFTREPTPVNGFTNLAVMEIDPNVDLEEMNA--------DGVQDNSGMASFMKDLTNSIPGIDEAMSFAELMKQVQNMDYSVIVFDTAPTGHTLRLLSFPTALDKAFDKILSLKNQFSGMFSQVSALLGGALPSQEMLLGKLEQTREVIQKVNAQFKDPDRTTFVCVCIPEFLSLYETERLVQELTKYEIDVHNVVVNQVLYP--------------------EEGSDCKSCSARQKMQQKYIDQIYDLYEDFHVVEMPLLTEEVRGVPSLKAFSENLLAP 322

The following BLAST results are available for this feature:

BLAST of NO09G03570 vs. NCBI_GenBank

BLAST of NO09G03570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM27451.1	6.400e-176	86.74	anion-transporting atpase [Nannochloropsis gaditan...	[more]
OEU16153.1	1.300e-115	61.52	anion-transporting ATPase [Fragilariopsis cylindru...	[more]
XP_002183697.1	2.100e-110	59.89	predicted protein [Phaeodactylum tricornutum CCAP ...	[more]
GAX23780.1	1.000e-109	59.38	arsenite-transporting ATPase [Fistulifera solaris]	[more]
GAX14939.1	1.400e-109	59.38	arsenite-transporting ATPase [Fistulifera solaris]	[more]
OWZ07292.1	1.200e-108	60.23	Arsenite-Antimonite Effluxprotein [Phytophthora me...	[more]
XP_008889650.1	2.000e-108	59.48	hypothetical protein PPTG_00036 [Phytophthora para...	[more]
XP_002288762.1	2.000e-108	59.49	anion-transporting ATPase [Thalassiosira pseudonan...	[more]
KUF79504.1	2.000e-108	58.33	ATPase GET3 [Phytophthora nicotianae]	[more]
POM76215.1	2.000e-108	59.48	Arsenite-Antimonite (ArsAB) Efflux Family [Phytoph...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL120	nonsL120	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR076	ncniR076	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR127	ngnoR127	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK010906	NSK010906	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO09G03570.1	NO09G03570.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|611113	gene_10344	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100107g13	gene3112	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO09G03570.1	NO09G03570.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO09G03570 ID=NO09G03570|Name=NO09G03570|organism=Nannochloropsis oceanica|type=gene|length=4804bp
TCCAATTCGTCTCTTGCTGTTTTTGATCCTTGTCGTCTCGACGGCTGGGC
GTTAGCTCGCGCATATTTACGCGGATTATACCGAACGAAGAGGGTCCAGC
ACATCCTTTTATTCTCTTTACGTCCTCCTTCTCGCTCCACCCTCTTTCAC
AAAGTCGCTCCTTCTTACCACCACCACCATGTTCACCCCCTCCCTCGTTC
TCAGATATGTACACAAATATATCGACAAAGACCGTCTAAAAGATCACACA
AACCCTACTTCCACATACCATCCGCAGCATCTCGGCACTGGCATGATCCA
CTGAATTGTGGCTCAGGTCAATGGAACGCAAGGCGGGGAAAAGACCCCTT
CTCACGCGTTTGCCAACGCCCGCACTCCTCCACCTCCCACGTAATTATAC
GAAAAATCCATCTCGCACAAAGAGGGGCAAGGGGAGTTAGGAAAGCAGAA
AGGGGTAGGCTGCTCGTCGCTGCCAGTTGAAGGGGGGTGGAAATGGAGGT
AATGCCGCTGGTGGGCCGAAAGCTGAAGCGGATGAAGATGATCGACCTCA
CCCTCCTCATTCTCCTCCACCTCTTCACTCTCCCTTACCCGACTCCCACC
ACCACTCCTCATCCTATACCCCTCCTTTGTCTCCTCCCTCTTCCTCCTCC
TTTCCCTCTTCTCTACCTCCTGCTGCATGGCCTCCACGAACAAACACAAC
CCCACACTCGTTATCCCGTTCCCTTTCACATCCAGCCACTCCAACTGTGC
CACCGCCCCCGAGCCAAGCAACCCCCCTACCTCCCTACTCCCCATCACTC
CAACCCAGTTCCAAGCCAGAGAAAGGCGACGGAGCTCCACATTCGCCTTT
CCTCGAAGGGAGGCACACACGGCAGCCGCCGCCGCGTTGTCCATGGAGTT
ATCGTTCAGGAGGAGAGTATGGAGGGAGGGCAGGTGCTGCAAGCATTTCC
CCAAGACACGCCCTACGTCTTTACAGAAGACATTACACGAAATGTTGAGG
GTTTGGAGGTGCGCGGCGAAGGGAGGGGGCGGAATGGTCGCCAGAAGGGC
AGCCAGAGCCGCAGCGTCTTGAGCCCTAAAGTTCCGGTACTCCAGTATTA
GGTGGGCGAGGGAGGGGAAGAATGCAAGCTGCTGAATAAGCAGGGAAACA
GCCGTGGGAGGCGGAGGAGGGAGCACGATGCAATCGCAGAACCGACAGTG
AGGGTGGTGGGGAGATGGCGTATGAGGAAGCGGAGGGGGGCCGCGAGGGT
GAGCCAGGTAGAGGAGGTGGCTTGGTCTGTGTGTGAGGAATGAGCAAAGC
TTGAAGGATGGGGTGGAATACGAAAGATGGTCCATGAAGAAGACTGGTTG
CCTCGTGTTGGGGATCCTTGCTCTTCCTGAGCGGCATTGTTTCTACAGTT
TCTACAGCCGCTGCTGTTGTTGTTATTGTTGTTGTTATTGTTGTTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTACTA
CAGCTGCTGCTGCCCCTCCAAAAGACAGAGATGCATGAATATGCTGTGGC
TTCTTTTGCAGGAAAGAAATCGGCCACCCCTATTGGACCTAGGCGGATAG
CGTCGCTGTCAATTCTCTGGACGTGAGCCCGGGCATGATGGTACCATTCA
TGCGAGACTGTGGAGAGACGAATCAAAGAGGGTGTGTCTAGGAAGCCCAA
AACGATGCTGGCCCCTTCGGGGGAGAGGAATTTTTCCAAGTTGCTGGGTG
GGCTGCCGGCCATTGCGGCGGAAGGTGTGGAGGTAGCAAGTGGCTCAAGC
ATTGGTGTGTAGCCTCCAGTTGGCCTGCCGGCACGTTATAGCCTGATAGA
GTCAAGGCACAACCCTGCCTCAAGTGTTCTTGCTTGACGACCTTGACGTT
GGAGAGCGAAGTTTTCACCGAGGAAGTGGCCCACTGAAGTACCAGCGTCC
CCTATTCTGGTGCAGTGGAATATAAAAGGCGTCAGAATAGCGTCTGATTT
TACGGCTGCGAACAAGTTCCGCTGACCTCCTGCCTGTGCTCTAGCCCTTT
CCTGTTTATCCAGGACGCAAAAACACCAGGACCAAGCAAGCTCAACGGCC
TCAGGCTCGTCTACCATTGTTGCTAGGTGGTAAAAAATCTCATGTCTATT
TCTTGGAGCTTGTCTGGGGTGTTCTGGTGTCTCATGTGGAGGGTTTTGCT
GCTTTAACAGCTCGCTGAAGCATAAGAATCGTCATACATGATCATCATGC
GTGCTCGTTTCGTTGCCTCGTGCACACTCATTTCCCCCGTACGCACCTCA
CATGGCATCTACGCATACACTCAGAGCATAGAAGTAGGAGCTATGAGTGC
CGCCACTGCCGTGAAGGTCGAGACGGAAGAGGAGGAGTTCCCGGAGGCCT
CCCTGCGCAACATCATCGAATCGGACCTGAAGTGGGTTTTTGTAGGGGGC
AAGGGTGGGGTGGGTAAGACTACTACGTCGTGCTGTTTGGCCATCCAGgt
gaggagatagacagtacgagccgggagggatgcagcgagaaaaagttcga
taggaaggccatggttggaccagaagcaacgtgacggcgcacaacctgga
gagagagtgaagcgtgggaaggaggaatggcggagtgacagcgggatgca
tggacaagcaaatatatagggatgatgcagtggttcacagatatagatca
aaatatagctgtacctcgatttctggcacaagcactcacccacccaatgc
cccttctactccccccctcaacacagCTCGCCAAGGTCCGTCAAAGTGTC
CTCATTATCTCCACAGACCCAGCTCATAACCTCTCTGATGCCTTCGGGCA
GAAATTCGGAAAAGACCCGGGAAAAGTCGATGGGTTTGACAACCTGTTTG
TGATGGAAATTGATCCGTCCTTTGACTGGGAGGAGATGAATGCCATGGTG
GCTCAATCTGGATCCATCCCGGGGGCGGAAGgtgcgtttgatcgttacgt
ggttgatcattcacttatttgcctttctctaccctcccttccttcctccc
cgatggggttcactgcgctgatggagatttatcctgtttccccttgtgtc
ttcaagctcaatttatactccctttctccctctttccccccctctctccc
tccctccctcctttatcgatgcagAAGGCGGAGGTTTGCAAAGCATGCTC
CAAGACCTGACCTCCTCCATCCCCGGCATCGACGAGATCATTTCCTTCGC
CGAGCTCATGAAGCAAGTCGAGAAGATGGACTACAGCACCGTCGTGTTCG
ACACCGCCCCCACGGGCCATACGCTCCGCCTCCTTTCCTTCCCTTCCACC
CTCGAAGGGGCCTTCGGGAAGTTGATGGCTTTGAAAAACAAGTTCTCGGG
GCTCATGTCGCAATTTGGGGGAATGATGGGCCAGCCTCCTGGGGCTGAAG
ATGCCTTGATGAGCAAGTTGGATCAAACGCGGGATACGATCGAAAAGgtg
cgttgtgttgtttggtttatttgtttatttatgtatagttaattatttat
ttttatttatatatatatatatatttgtttggttgtttgtttgtttgttt
gtttgtttgtttgtttgtttgtttgtttccctccttgtgcgttgaggcca
ttgacgtgaccccgaactacttcgacttccacttgttcttcctcttgtac
ctcttttttatcttgcttttcatcatcgtcgtcttcttctctttcttctt
cgaataccgaggccgccgtatagaaggagggaaatacacgagccagtaga
aatcaacaccggatagggggaaatcattaaaccctgaagtgtaacgatcc
tccccattccattcaattcatcccattactgatgacagGTTAACCGTCAA
TTCCGGGACCCCAACGCCACCACCTTTGTCTGCGTATGCATCGCTGAATT
CCTCTCCATTTACGAAACCGAACGCCTCGTGCAAGAGCTGGCCAAGTTCG
AGATTGATTCGCACAACATTGTTGTCAATCAGgtacaaggccttggcctc
cctcctttctcttccccatccccggtgcccctgttgtttgccttactttg
agacttggaagctgatagttataatttatgtctctggacttcccccttcc
ttctctccctcccttcctccctcgttctctcgcctggccccagaaagcca
agggccccctctaagaaagcaaacactctgctcatatctcatccgtcccc
tcccttctgcaaaccttgtgcccctccctccctcccctcttcccattctt
agGTCCTCTTTCCCGACAAGGACGCGGCAGAAATGACCGCATGGCACGAG
AAGACCAAGAGCAGCCTGCCCGCGGAGGCCAACGAGATCATCAGTAAATT
TTTGGCACGAAAAAAGATGCAAGACAAATACATCAACCAGgtgagaagaa
aggcgggagagcaaggggatgggtgggtgtctgcagtcgggattgctccg
cgctccctttgttccctcgccccagtgaaatcaagctacggacagggcag
gacaggcaggaagaagcatcaactgaccattcgaattcgcattcccgtct
caatttgtttttcagGTTTTTGACCTCTACGAGGATTTCCACGTGGTGCT
CATGCCCCTGTTGGACCAGGAAGTGAGAGGGGTGGAGAGCCTGCGGCGAT
TCAGTGAGGCGTTGCTGACCCCACCCGACGAGAAATAGATAGAGGGGACA
GGGAGATGGGGGTAGGAAGGGAGGGAAGAATGAATGAGTGGTAAAGGGAA
AAGC

protein sequence of NO09G03570.1

>NO09G03570.1-protein ID=NO09G03570.1-protein|Name=NO09G03570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=398bp
MIIMRARFVASCTLISPVRTSHGIYAYTQSIEVGAMSAATAVKVETEEEE
FPEASLRNIIESDLKWVFVGGKGGVGKTTTSCCLAIQLAKVRQSVLIIST
DPAHNLSDAFGQKFGKDPGKVDGFDNLFVMEIDPSFDWEEMNAMVAQSGS
IPGAEEGGGLQSMLQDLTSSIPGIDEIISFAELMKQVEKMDYSTVVFDTA
PTGHTLRLLSFPSTLEGAFGKLMALKNKFSGLMSQFGGMMGQPPGAEDAL
MSKLDQTRDTIEKVNRQFRDPNATTFVCVCIAEFLSIYETERLVQELAKF
EIDSHNIVVNQVLFPDKDAAEMTAWHEKTKSSLPAEANEIISKFLARKKM
QDKYINQVFDLYEDFHVVLMPLLDQEVRGVESLRRFSEALLTPPDEK*

Synonyms

Publications