NO09G02940, NO09G02940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02940 vs. NCBI_GenBank
Match: XP_005852683.1 (bromodomain-containing protein [Nannochloropsis gaditana CCMP526] >EKU23152.1 bromodomain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 345.9 bits (886), Expect = 5.600e-91 Identity = 190/317 (59.94%), Postives = 231/317 (72.87%), Query Frame = 0 Query: 338 MDLGTITYKLRQGRYRTVSRFFRDIELVYANCERFNLDTPSPAVLAYANHLKHHTRSLWLELMVAEGEDEDEKEDGMPSVWDREAVEEKRQERQDRLLFCQDLPLSKHDVRELREKLARVQEHVEKEDGSLGMLESLVGYGALLAVGEG-GXXXXXXXXXXVGRAWEGLGRAFQGK-------EWAAGEGRTMEKVVDAFHLVTAGVKERRLRGTEFSSIWAQPVRLVWAGQKKPGGARHQAQAYWPGMVVMYGDTPDFLTRLNESRLPLVYAKVLRKQRTGNKAGMSTHQVVVETFGAHDFMIYNMELIRPYTGPE 647 MDLGT+ KL +G Y ++ RF +DIELV+ANCER++ TP+P+VLA+ANHLK + RSLWLE+MV EG E +E G SVW+ AV EK Q R++RL+FC+DLPL D+RELR ARV +E+EDG+ G +E +VG+ A LA +G G XXXXXXXX R WEGL AF G EWA + + FHLVTA ++ERRLRGTEFS IWAQP R VWAGQ+KPGG+++Q AYWPGMVVMYGD P+FLTRLNE+RLP AK L KQRT NK GMS H+VVVETFGAHDFM YN +++RPYTG E Sbjct: 1 MDLGTVHRKLYRGLYGSIRRFSQDIELVFANCERYHQGTPAPSVLAHANHLKTYARSLWLEVMVDEG-GEGGREGG--SVWEPAAVREKHQAREERLVFCRDLPLKPGDLRELRTVGARVLRALEEEDGTWGQMERVVGFDAFLAAEKGEGGAXXXXXXXXXXRVWEGLQHAFPGDGPPEQTVEWAG----IRAEFENTFHLVTASLRERRLRGTEFSCIWAQPFRFVWAGQRKPGGSKNQVLAYWPGMVVMYGDAPEFLTRLNEARLPRSIAKELHKQRTVNKQGMSVHRVVVETFGAHDFMFYNADMVRPYTGGE 310
BLAST of NO09G02940 vs. NCBI_GenBank
Match: EWM27508.1 (hypothetical protein Naga_100948g1 [Nannochloropsis gaditana]) HSP 1 Score: 114.4 bits (285), Expect = 2.700e-21 Identity = 129/274 (47.08%), Postives = 161/274 (58.76%), Query Frame = 0 Query: 92 SSNGNARVNSSSSALPDSVVIQAS------TPGAAGGA----PPLSTEWSVDGHPLCHSRLLGATGVMGKVEAYRCRPLGRGEYQQQEQTTTMTAAGTVEEFLVRLADGWQGAVTKRLVEEGIARFLATVSSEEAW-----AREQGGE------------------VMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASGTLERLVVPLPEEAANKSSLTLSETRRGLELVRRLAAPYFAREFSQPIKELHPEVWKEYQK 333 SSNG+A + + L S AS PG GA PL+T WS D HPLCH+ L+ +G+ G+VEA+R R GRGE + ++ G +EFL+ L+DG QG + + ++ I R A + +A R+ GE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +ERL VPLP A K+SLT E RR LE VRRLA+PYFAR+F P+ ELHPEVW+E ++ Sbjct: 49 SSNGDAGDRAMNLTLGSSFEAAASMARAGLKPGYGEGAYYPQAPLATAWSPDAHPLCHALLMTPSGMTGRVEAHRRRQGGRGEGNEWG-----SSPGVTDEFLIGLSDGSQGVLPESMLRTCIERLEAHTAGNQAQLQTLRERDAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGVTGAPVERLCVPLPRAPAGKASLTPEERRRCLEFVRRLASPYFARDFCHPVSELHPEVWEEVRR 317
BLAST of NO09G02940 vs. NCBI_GenBank
Match: CBN79968.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 95.9 bits (237), Expect = 1.000e-15 Identity = 108/461 (23.43%), Postives = 170/461 (36.88%), Query Frame = 0 Query: 300 LELVRRLAAPYFAREFSQPIKELHPEVWKEYQKVITHPMDLGTITYKLRQGRY-RTVSRFFRDIELVYANCERFNLDTPSPAVLAYANHLKHHTRSLWLELMVAEGEDEDEKEDGMPSVWDREAVEEKRQE--RQDRLLFCQDL--------------------------PLSKHDVRELREKLARVQEHVEKEDGSLGMLESLVGYGALLAVG--------------------------------EGGXXXXXXXXXXVGRAWEGLGRAFQGKE-----------WAAGEGRTMEKVVDAFHLVTAGVKERRLRGTEFSSIWAQPVRLVWAGQKKPGGARHQAQAYWPGMVVMYGDTPDFLTRLNESRLPLVYAKVLRKQRTGNKAGMSTHQVVVETFGAHDFMIYNMELIRPYTGPESDPNTPNNKHLKGKEAYLEGVREIERAWREIGISLREEDDDP 689 + ++R LA + EF +P+ +LHPE+ + Y + P+DL T+ ++R+G Y + R RDI ++ NCERFN+ + A HL+ S W E +P + +A +R+ R R C P + RE E + + E E+ + L A LA+G G AW A G++ AA + A T V RGT FSS+WA+P +LVWA Q K +WP M++ T L +N R+P + + L KQ G K G + + VVE FG H+F + + +RP + + PN +K+ K + +E R+ R++ S+ +P Sbjct: 1 MNILRLLAGSPLSEEFRKPVVQLHPELAERYTVEVRRPIDLTTVARRVRRGTYDNSAGRLRRDIARIFTNCERFNM-CSGQLFVGIARHLRALFESKW-------------AESDLPYPGESQATSHRRRAALRTARYRLCWXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGANGVSREFSEDILPMLSG-EGEESNEEWTLGLFAERACLALGLRANQXXXXXXXXXXXXXXXXXXXXXXXXXXKAGRDACADWLFGPRQAAWLAAETAPAGEKRDPASAPPPVATAAVVSAAWRALDGALSPATVLVASNAARGTPFSSVWARPDKLVWAKQAK--------NTFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGTK-GNNRNGAVVEFFGLHEFALLKPDALRPLSTLDKSPNKTVSKN-KRWDPTMEEARKAVVNLRDLETSMYMPQPEP 436
BLAST of NO09G02940 vs. NCBI_GenBank
Match: EJK46140.1 (hypothetical protein THAOC_35209 [Thalassiosira oceanica]) HSP 1 Score: 77.8 bits (190), Expect = 2.800e-10 Identity = 98/374 (26.20%), Postives = 146/374 (39.04%), Query Frame = 0 Query: 311 FAREFSQPIKELHPEVWKEYQKVITHPMDLGTITYKLRQGRYRTVSRFFRDIELVYANCERF-----NLDTPSPAVLAYANHLKHHTRSLWLELMV---AEGEDEDEKEDGMPSVWDREAVEEKRQERQDRLLFCQDLPLSKHDVRELREKLARVQEHVEKE-DGSLGMLESLVGYGALLAVG--------EGGXXXXXXXXXXVGRAWEGLGRAFQGKEWAAGEGRTMEKVVDAFH----LVTAGVKERRLRGTEFSSIWAQPVRLVWAGQKKPGGARHQAQAYWPGMVVMYGDTPDFL-------TRLNESRLP------LVYAKVLRKQRTGNKAGMSTHQVVVETFGAHDFMIYNMELIRPYTGPESDPN 651 F EFS+P+ LHPE+ Y K+I HPMDLG I +R+ Y++ D+ V++NC +F N D P+ ++ A HL+ LW E ++ A K + S + + A K + +Q D L+K V+ L+ L+ + E + D LG +ES G AL + G + R + E + E K+ + A + E RG SSIW +WA + K + YWP +V+ D L T NE+RLP L AK +Q + +VE G H+F+ I PE D N Sbjct: 383 FLAEFSRPVALLHPELVTLYNKIIHHPMDLGHICRLIRRREYKSTRDIQLDVWRVFSNCIKFHMSPSNRDNAIPSFISIAMHLREFFNILWQEYLLPSDAPPRMPGGKVSHVHSRFQKRADNRKERIKQVSSTILTDRVLAK-VVQHLQFFLSSGGKVDELDRDTPLGNVESATGKMALFIEAIRRTINTLQDKISSDNDVEYTAGELVRDIKRTY--TEDVSLEVLKKMKITTRLDRILGKILAPLHEVSCRGVNQSSIWGCMAAAIWARESK-------KKPYWPAIVLGILAPDDQLEEWHQSVTDRNEARLPEKLRADLKVAKRRAEQGLKKQGSDPMSYFLVEFMGTHEFIWVKESDIIENFDPEDDVN 746
BLAST of NO09G02940 vs. NCBI_GenBank
Match: ACD74899.1 (BDF2 [Pneumocystis carinii]) HSP 1 Score: 70.5 bits (171), Expect = 4.500e-8 Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 0 Query: 284 EAANKSSLTLSETRRGLELVRRLAAPYFAREFSQPIKELHPEVWKEYQKVITHPMDLGTITYKLRQGRYRTVSRFFRDIELVYANCERFNLDTPSPAVLA 384 E A ++ +T + + + ++R+L AR F+QP+ + + Y +ITHPMD GTI KL +Y TV F +D+ELV+ NC FN + +++A Sbjct: 163 EKAEQAEMTKEQYKYAISILRQLRRNRDARPFNQPVDPIKLNI-PSYPTIITHPMDFGTIDKKLSSKQYETVDXFKKDVELVFTNCFTFNGEESPISIMA 261
BLAST of NO09G02940 vs. NCBI_GenBank
Match: XP_007872424.1 (hypothetical protein PNEG_00534 [Pneumocystis murina B123] >EMR11523.1 hypothetical protein PNEG_00534 [Pneumocystis murina B123]) HSP 1 Score: 68.9 bits (167), Expect = 1.300e-7 Identity = 35/100 (35.00%), Postives = 55/100 (55.00%), Query Frame = 0 Query: 284 EAANKSSLTLSETRRGLELVRRLAAPYFAREFSQPIKELHPEVWKEYQKVITHPMDLGTITYKLRQGRYRTVSRFFRDIELVYANCERFNLDTPSPAVLA 384 E + +T + + L ++R+L AR F+QP+ + + Y +ITHPMD GTI KL +Y TV F +D+ELV+ NC FN + +++A Sbjct: 160 EKVEQVEMTKEQYKYALSMLRQLRRNKDARPFNQPVDPIKLNI-PSYPTIITHPMDFGTIDKKLSSKQYETVEEFKKDVELVFTNCFTFNGEESPISIMA 258
BLAST of NO09G02940 vs. NCBI_GenBank
Match: GAX14571.1 (hypothetical protein FisN_6Lh349 [Fistulifera solaris]) HSP 1 Score: 68.6 bits (166), Expect = 1.700e-7 Identity = 83/374 (22.19%), Postives = 151/374 (40.37%), Query Frame = 0 Query: 314 EFSQPIKELHPEVWKEYQKVITHPMDLGTITYKLRQGRYRTVSRFFRDIELVYANCERF----NLDTPSPAVLAYANHLKHHTRSLWLELMVAEGEDEDEKEDGMPSVWDREAVEEKRQERQDRLLFCQDLPLSKHDVRELREKLARVQEHVEKEDGSLGMLESLVGYGA---------------LLAVGEGGXXXXXXXXXXVGRAWEGLGRAFQ---GKEWAAGEGRTMEKVVDAFHLVTAGVKERRLRGTEFSSIWAQPVRLVWA--GQKKPGGARHQAQAYWPGMVV-------MYGDTPDFLTRLNESRLPLVYAKVLRKQRTGNKAGMSTHQ-----VVVETFGAHDFM-IYNMELIRPYTGPESDPN 651 EFS+P+ LHPE+ Y K++ HP+DLG I +R+ +Y+ + D+ V+ANC ++ N P+ ++ A HL+ +LW E M+ ++ S +E + ++++R+ L L ++ ++ +R K+ G + L++ +G L + E + + ++ L A+ +E A R ++ F + + E RG SSIW +WA KKP +WP + + + +T+ NE RLP L R NK ++ + +VE G H+F+ + ++I + DPN Sbjct: 252 EFSRPVSLLHPELISTYSKIVKHPLDLGHICRGIRRRQYKNLRDIRLDMWRVFANCVKYHSHPNNKEAVPSFVSIALHLREFFNNLWNEYMLPSDLPDN------ASTTMKEMFQTRQKDRKSILENSGVLTIT----LKITGVTSRTIRKFIKDGGRVDALDTDAVFGPDAKEQDRDLEVVVANLTKIRE--DLMEREDDYALEKFYQDLKAAYTIDVLEENPALRNRIGNRITRMFWKLFLPLHEANTRGVSQSSIWGNIAATIWARESSKKP---------FWPALCLGILAPEDQRESWHESITQRNEMRLPEKLRAPLEASR--NKCTLAQQRQPLSYFMVEFLGTHEFIWVRETDIIENFDA-SKDPN 601
BLAST of NO09G02940 vs. NCBI_GenBank
Match: XP_018227201.1 (hypothetical protein T552_00322 [Pneumocystis carinii B80] >KTW30605.1 hypothetical protein T552_00322 [Pneumocystis carinii B80]) HSP 1 Score: 67.8 bits (164), Expect = 2.900e-7 Identity = 35/100 (35.00%), Postives = 54/100 (54.00%), Query Frame = 0 Query: 284 EAANKSSLTLSETRRGLELVRRLAAPYFAREFSQPIKELHPEVWKEYQKVITHPMDLGTITYKLRQGRYRTVSRFFRDIELVYANCERFNLDTPSPAVLA 384 E +T + + L ++R+L AR F+QP+ + + Y +ITHPMD GTI KL +Y TV F +D+ELV+ NC FN + +++A Sbjct: 220 EKVESVEMTNEQYKFALSILRQLRRNRDARPFNQPVDPIKLNI-PSYPTIITHPMDFGTIDKKLSSKQYETVDEFKKDVELVFTNCFTFNGEESPISIMA 318
BLAST of NO09G02940 vs. NCBI_GenBank
Match: ORY80887.1 (Bromodomain-containing protein, partial [Protomyces lactucaedebilis]) HSP 1 Score: 67.0 bits (162), Expect = 5.000e-7 Identity = 46/117 (39.32%), Postives = 60/117 (51.28%), Query Frame = 0 Query: 301 ELVRRLAAPYFAREFSQPIKELHPEVWKEYQKVITHPMDLGTITYKLRQGRYRTVSRFFRDIELVYANCERFNLDTPSPAVLAYANHLKHHTRSLWLELMV---AEGE-DEDEKEDG 414 EL R+ PY A F P+ + + EY KVI HPMDLGTI KL+QG Y + F D+ L++ NC +FN P V A L+ W E V +GE D D+ +DG Sbjct: 173 ELQRKQHEPY-AFPFYVPVDPVALNI-PEYTKVIKHPMDLGTIDSKLKQGEYESAEDFEFDVRLIFRNCYKFN--PPGTPVQAMGKKLEAVFNQKWAEKPVPRAQQGESDSDDSDDG 285
BLAST of NO09G02940 vs. NCBI_GenBank
Match: GAX22101.1 (hypothetical protein FisN_6Hh349 [Fistulifera solaris]) HSP 1 Score: 66.6 bits (161), Expect = 6.600e-7 Identity = 83/380 (21.84%), Postives = 153/380 (40.26%), Query Frame = 0 Query: 314 EFSQPIKELHPEVWKEYQKVITHPMDLGTITYKLRQGRYRTVSRFFRDIELVYANCERF----NLDTPSPAVLAYANHLKHHTRSLWLELMVAEGEDEDEKEDGMPSVWDREAVEEKRQERQDRLLFCQDLPLSKHDVRELREKLARVQEHVEKEDGSLGMLESLVGYGALLAVGEGGXXXXXXXXXXVGR---AWE---GLGRAFQG----------KEWAAGEGRTMEKVVDAFHLVTAGVKERRLRGTEFSSIWAQPVRLVWA--GQKKPGGARHQAQAYWPGMVV-------MYGDTPDFLTRLNESRLPLVYAKVLRKQRTGNKAGMSTHQ-----VVVETFGAHDFM-IYNMELIRPYTGPESDPNTPNNKHLK 659 EFS+P+ LHPE+ Y K++ HP+DLG I +R+ +Y+ + D+ V+ANC ++ N P+ ++ A HL+ +LW E M+ E+ + +E + ++++R+ + L ++ ++ +R + K+ G + L+ +G + +G +W+ L + +Q +E A R ++ F + + E RG SSIW +WA KKP +WP + + + +T+ NE RLP L R NK ++ + +VE G H+F+ + ++I + DPN + K Sbjct: 253 EFSRPVSLLHPELISTYSKIVKHPLDLGHICRGIRRRQYKNLRDIRLDMWRVFANCVKYHSHPNNKEAVPSFVSIALHLREFFNNLWNEHMLPSDLPENASDT------MKEMFQTRQKDRKSIMESSGVLSITP----KITGVTSRTIKKFIKDGGRVDGLDKDAVFGPDAKEKDRDLEVVVANLTKIGEKVMSWDEDYTLEKFYQELKAVYTVDVLEENPALRNRIGNRITRMFWKLFLPLHEANSRGVSQSSIWGNIAATIWARESSKKP---------FWPAICLGILAPEDQRESWHESITQRNEMRLPEKLRAPLEASR--NKCILAQQRQPLSYFMVEFLGTHEFIWVRETDIIENFDA-SKDPNKDTSSSKK 610 The following BLAST results are available for this feature:
BLAST of NO09G02940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02940 ID=NO09G02940|Name=NO09G02940|organism=Nannochloropsis oceanica|type=gene|length=5439bpback to top protein sequence of NO09G02940.1 >NO09G02940.1-protein ID=NO09G02940.1-protein|Name=NO09G02940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1337bpback to top Synonyms
Publications
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