NO09G02330, NO09G02330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G02330 vs. NCBI_GenBank
Match: XP_010457426.1 (PREDICTED: BRCA1-associated RING domain protein 1-like isoform X2 [Camelina sativa]) HSP 1 Score: 91.7 bits (226), Expect = 1.300e-14 Identity = 66/222 (29.73%), Postives = 107/222 (48.20%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG--------EGRKCVVICNSVPESGG--GREGGM---EGGGLPEMLKGEGTVVVSSDWLLDSISNYRV 905 +V+ ++L S ++ ++FN ++R P+VTHV+A D K A TRTLK L G+L +W++ W+ SL + E +E+ D + + P ARL P LF YF+GDF + ++DL++LV V GG ++ E G + R +V+ N P G G E + + G+ +V WLL+SI+ Y++ Sbjct: 495 LVLCGSALSKSDKNLMESLAVKFNATISRYWNPNVTHVIASTDEK-GACTRTLKVLMGILNGKWIINADWMKASLEASQPVDEEPFEIHIDSQGCQ-DGPKSARLGAANNKPKLFDGLKFYFFGDF--YQGYKEDLQNLVKVAGGTVLNTEDELGAESSNSADDQRSPIVVYNIDPPIGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWLLESIAGYKL 712
BLAST of NO09G02330 vs. NCBI_GenBank
Match: XP_011422026.1 (PREDICTED: BRCA1-associated RING domain protein 1 isoform X1 [Crassostrea gigas]) HSP 1 Score: 91.7 bits (226), Expect = 1.300e-14 Identity = 51/146 (34.93%), Postives = 76/146 (52.05%), Query Frame = 0 Query: 699 LPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVK 845 L T L L + + RV P+VTHVV+ + + RT+KYL G+L RW+V W+ SL G E +E+ G + A K R++R +++P LF YF+G F P P R+DL SLV +GGG++++ Sbjct: 441 LGTGLSREQRSTLQKCASKLQARVVEGFCPEVTHVVSGCNNEGLC-PRTIKYLQGVLSGRWIVNMEWVEMSLEYGSKLVEEAFEIPGTSTDPQSGAAQKGRINRQKQLPGLFDGCQFYFYGHFEYPTPDREDLVSLVKLGGGQVIQ 585
BLAST of NO09G02330 vs. NCBI_GenBank
Match: XP_011422027.1 (PREDICTED: BRCA1-associated RING domain protein 1 isoform X2 [Crassostrea gigas]) HSP 1 Score: 91.7 bits (226), Expect = 1.300e-14 Identity = 51/146 (34.93%), Postives = 76/146 (52.05%), Query Frame = 0 Query: 699 LPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVK 845 L T L L + + RV P+VTHVV+ + + RT+KYL G+L RW+V W+ SL G E +E+ G + A K R++R +++P LF YF+G F P P R+DL SLV +GGG++++ Sbjct: 427 LGTGLSREQRSTLQKCASKLQARVVEGFCPEVTHVVSGCNNEGLC-PRTIKYLQGVLSGRWIVNMEWVEMSLEYGSKLVEEAFEIPGTSTDPQSGAAQKGRINRQKQLPGLFDGCQFYFYGHFEYPTPDREDLVSLVKLGGGQVIQ 571
BLAST of NO09G02330 vs. NCBI_GenBank
Match: XP_011422028.1 (PREDICTED: BRCA1-associated RING domain protein 1 isoform X3 [Crassostrea gigas]) HSP 1 Score: 91.7 bits (226), Expect = 1.300e-14 Identity = 51/146 (34.93%), Postives = 76/146 (52.05%), Query Frame = 0 Query: 699 LPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVK 845 L T L L + + RV P+VTHVV+ + + RT+KYL G+L RW+V W+ SL G E +E+ G + A K R++R +++P LF YF+G F P P R+DL SLV +GGG++++ Sbjct: 420 LGTGLSREQRSTLQKCASKLQARVVEGFCPEVTHVVSGCNNEGLC-PRTIKYLQGVLSGRWIVNMEWVEMSLEYGSKLVEEAFEIPGTSTDPQSGAAQKGRINRQKQLPGLFDGCQFYFYGHFEYPTPDREDLVSLVKLGGGQVIQ 564
BLAST of NO09G02330 vs. NCBI_GenBank
Match: ACF35259.1 (BARD1, partial [Arabidopsis thaliana]) HSP 1 Score: 90.9 bits (224), Expect = 2.200e-14 Identity = 65/223 (29.15%), Postives = 107/223 (47.98%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG---------EGRKCVVICNSVPESGG--GREGGM---EGGGLPEMLKGEGTVVVSSDWLLDSISNYRV 905 +V+ ++L S ++ +RFN ++R P VTHV+A D K A TRTLK L G+L +W++ +W+ SL + E +E+ D + + P ARL P LF+ YF+GDF + ++DL++LV V GG ++ E G + +V+ N P G G E + + G+ +V W+L+SI+ Y++ Sbjct: 451 LVLCGSALSKSDKKLMESLAVRFNATISRYWNPSVTHVIASTDEK-GACTRTLKVLMGILNGKWIINAAWMKASLKASQPVDEEPFEIQIDTQGCQ-DGPKTARLRAETNKPKLFEGLKFYFFGDF--YKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNIDPPHGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWVLESIAGYKL 669
BLAST of NO09G02330 vs. NCBI_GenBank
Match: ACF35260.1 (BARD1, partial [Arabidopsis thaliana]) HSP 1 Score: 90.9 bits (224), Expect = 2.200e-14 Identity = 65/223 (29.15%), Postives = 107/223 (47.98%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG---------EGRKCVVICNSVPESGG--GREGGM---EGGGLPEMLKGEGTVVVSSDWLLDSISNYRV 905 +V+ ++L S ++ +RFN ++R P VTHV+A D K A TRTLK L G+L +W++ +W+ SL + E +E+ D + + P ARL P LF+ YF+GDF + ++DL++LV V GG ++ E G + +V+ N P G G E + + G+ +V W+L+SI+ Y++ Sbjct: 269 LVLCGSALSKSDKKLMESLAVRFNATISRYWNPSVTHVIASTDEK-GACTRTLKVLMGILNGKWIINAAWMKASLKASQPVDEEPFEIQIDTQGCQ-DGPKTARLRAETNKPKLFEGLKFYFFGDF--YKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNIDPPHGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWVLESIAGYKL 487
BLAST of NO09G02330 vs. NCBI_GenBank
Match: F4I443.1 (RecName: Full=BRCA1-associated RING domain protein 1; Short=AtBARD1; AltName: Full=Protein REPRESSOR OF WUSCHEL 1) HSP 1 Score: 90.9 bits (224), Expect = 2.200e-14 Identity = 65/223 (29.15%), Postives = 107/223 (47.98%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG---------EGRKCVVICNSVPESGG--GREGGM---EGGGLPEMLKGEGTVVVSSDWLLDSISNYRV 905 +V+ ++L S ++ +RFN ++R P VTHV+A D K A TRTLK L G+L +W++ +W+ SL + E +E+ D + + P ARL P LF+ YF+GDF + ++DL++LV V GG ++ E G + +V+ N P G G E + + G+ +V W+L+SI+ Y++ Sbjct: 491 LVLCGSALSKSDKKLMESLAVRFNATISRYWNPSVTHVIASTDEK-GACTRTLKVLMGILNGKWIINAAWMKASLKASQPVDEEPFEIQIDTQGCQ-DGPKTARLRAETNKPKLFEGLKFYFFGDF--YKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNIDPPHGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWVLESIAGYKL 709
BLAST of NO09G02330 vs. NCBI_GenBank
Match: AAD10669.1 (Hypothetical protein [Arabidopsis thaliana]) HSP 1 Score: 90.9 bits (224), Expect = 2.200e-14 Identity = 65/223 (29.15%), Postives = 107/223 (47.98%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG---------EGRKCVVICNSVPESGG--GREGGM---EGGGLPEMLKGEGTVVVSSDWLLDSISNYRV 905 +V+ ++L S ++ +RFN ++R P VTHV+A D K A TRTLK L G+L +W++ +W+ SL + E +E+ D + + P ARL P LF+ YF+GDF + ++DL++LV V GG ++ E G + +V+ N P G G E + + G+ +V W+L+SI+ Y++ Sbjct: 504 LVLCGSALSKSDKKLMESLAVRFNATISRYWNPSVTHVIASTDEK-GACTRTLKVLMGILNGKWIINAAWMKASLKASQPVDEEPFEIQIDTQGCQ-DGPKTARLRAETNKPKLFEGLKFYFFGDF--YKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNIDPPHGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWVLESIAGYKL 722
BLAST of NO09G02330 vs. NCBI_GenBank
Match: NP_973758.2 (breast cancer associated RING 1 [Arabidopsis thaliana] >AEE27646.1 breast cancer associated RING 1 [Arabidopsis thaliana]) HSP 1 Score: 90.9 bits (224), Expect = 2.200e-14 Identity = 65/223 (29.15%), Postives = 107/223 (47.98%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG---------EGRKCVVICNSVPESGG--GREGGM---EGGGLPEMLKGEGTVVVSSDWLLDSISNYRV 905 +V+ ++L S ++ +RFN ++R P VTHV+A D K A TRTLK L G+L +W++ +W+ SL + E +E+ D + + P ARL P LF+ YF+GDF + ++DL++LV V GG ++ E G + +V+ N P G G E + + G+ +V W+L+SI+ Y++ Sbjct: 490 LVLCGSALSKSDKKLMESLAVRFNATISRYWNPSVTHVIASTDEK-GACTRTLKVLMGILNGKWIINAAWMKASLKASQPVDEEPFEIQIDTQGCQ-DGPKTARLRAETNKPKLFEGLKFYFFGDF--YKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNIDPPHGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWVLESIAGYKL 708
BLAST of NO09G02330 vs. NCBI_GenBank
Match: NP_001318917.1 (breast cancer associated RING 1 [Arabidopsis thaliana] >OAP13610.1 ROW1 [Arabidopsis thaliana] >AEE27647.2 breast cancer associated RING 1 [Arabidopsis thaliana]) HSP 1 Score: 90.9 bits (224), Expect = 2.200e-14 Identity = 65/223 (29.15%), Postives = 107/223 (47.98%), Query Frame = 0 Query: 696 IVILPTSLPHSMLGKLDEFLLRFNCRVTRVPGPDVTHVVARADAKRRAETRTLKYLHGLLQRRWVVGPSWLSDSLLKGKIEREVKYELMGDPKASEPSAPLKARLSRYRRMPLLFQKYDVYFWGDFPPPRPTRKDLESLVVVGGGRLVKAWVEGG---------EGRKCVVICNSVPESGG--GREGGM---EGGGLPEMLKGEGTVVVSSDWLLDSISNYRV 905 +V+ ++L S ++ +RFN ++R P VTHV+A D K A TRTLK L G+L +W++ +W+ SL + E +E+ D + + P ARL P LF+ YF+GDF + ++DL++LV V GG ++ E G + +V+ N P G G E + + G+ +V W+L+SI+ Y++ Sbjct: 490 LVLCGSALSKSDKKLMESLAVRFNATISRYWNPSVTHVIASTDEK-GACTRTLKVLMGILNGKWIINAAWMKASLKASQPVDEEPFEIQIDTQGCQ-DGPKTARLRAETNKPKLFEGLKFYFFGDF--YKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNIDPPHGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWVLESIAGYKL 708 The following BLAST results are available for this feature:
BLAST of NO09G02330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G02330 ID=NO09G02330|Name=NO09G02330|organism=Nannochloropsis oceanica|type=gene|length=3030bpback to top protein sequence of NO09G02330.1 >NO09G02330.1-protein ID=NO09G02330.1-protein|Name=NO09G02330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=922bpback to top Synonyms
Publications
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