NO09G02200, NO09G02200 (gene) Nannochloropsis oceanica

Overview
NameNO09G02200
Unique NameNO09G02200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3395
Alignment locationchr9:664804..668198 +

Link to JBrowse

Properties
Property NameValue
DescriptionArginyl-trna synthetase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:664804..668198 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006420arginyl-tRNA aminoacylation
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0004814arginine-tRNA ligase activity
GO:0005524ATP binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR036695Arg-tRNA-synth_N_sf
IPR009080tRNAsynth_1a_anticodon-bd
IPR035684ArgRS_core
IPR008909DALR_anticod-bd
IPR005148Arg-tRNA-synth_N
IPR001278Arg-tRNA-ligase
Homology
BLAST of NO09G02200 vs. NCBI_GenBank
Match: WP_015121209.1 (arginine--tRNA ligase [Rivularia sp. PCC 7116] >AFY57652.1 arginyl-tRNA synthetase [Rivularia sp. PCC 7116])

HSP 1 Score: 651.0 bits (1678), Expect = 4.400e-183
Identity = 336/596 (56.38%), Postives = 439/596 (73.66%), Query Frame = 0
Query:  126 RQALASQVRESLHAAFGADAEGADAMVTPATRPEFGDYQCNAALALAKRLKAKPREVAEKLKEELEGRTQEWCEPLEIAGPGFINVKMKNAFVEQKVNGMLSDTSGRLGVARPQKPQKVVVDFSSPNIAKEMHVGHLRSTVIGDTVARVLEFLGHDVMRLNHVGDWGTQFGMLITHLKEAHPEVLAEEGKSETGIGDLVEFYKAAKVRFDEDEEFKLKSRQEVVNLQGGKEETLKAWRTLCALSRGEFQKIYDALGVRLEERGESFYNPMLGDVISDLDKSGLLVESEGARVVFLDGYVTREGERQPFIVQKTDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQAKFVPDSVQLKHVPFGLVQGEDGKKFKTRAGDTVKLKDLLDEAVRIARDDLIKR--SEEGGYLPPDDLEQSAKTIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRK-DMGGEXXXXXXXXXXXXXXXXLQEPAELNLARQLIKLTELLQRVEADLYPHVLCEYMYDISQKFNQFYESCPVNTAPTPGLVQSRRTLCALTAQVLRLCLDLLGIEVLQRM 719
            ++ L  +++++L  AFG +    D ++ PA++PEFGDYQ N AL+LAK+L  KPR++A ++ E L+    + CE  EIAGPGFIN++++ +++E ++N +  D   RLGV   ++P++ VVDFSSPNIAKEMHVGHLRST+IGD +AR+LEF GHDV+RLNHVGDWGTQFGMLIT+L+E  P  L      +  IGDLV FYK AK RFDEDEEF+ KSR EVV LQ G E+T+ AW+ LC  SR EFQ IYD L +++EERGESFYNP+L +V+ DLDK+GLL  S+GA+VVFL G+  R+G+  P IVQK+DGG+ YATTDLAA RHR  +E+A+R++YVTDAGQA+HF  VFQVA +A ++P+ V++ HVPFGLV GEDGKK KTR+G+TV+L+DLLDEAV   R+DL KR   EEG     D +   AK +G+ AVKYADLS NR  +YKFS+ KML+L GNTAPYMLYAYAR QSI RK D+  E                L+E AE  LA+ +++L E++  VE +L P+ LCEY+Y +S+KFNQF+E+CPV  +  P +  SR  LC LTA+ L+L L+LLGIEVL+RM
Sbjct:    5 QEHLREKLKQALGKAFGDEYANTDPILVPASKPEFGDYQANMALSLAKKLGQKPRDIANQVVENLD--VSDICEKPEIAGPGFINLRLQTSYLEAQLNSIQKDE--RLGVPTAKQPKREVVDFSSPNIAKEMHVGHLRSTIIGDAIARILEFRGHDVIRLNHVGDWGTQFGMLITNLREVSPSALTTANALD--IGDLVNFYKQAKKRFDEDEEFQEKSRNEVVKLQAGAEDTIHAWKLLCEQSRKEFQVIYDLLDIKVEERGESFYNPLLPEVVEDLDKAGLLESSDGAKVVFLKGFKNRDGQPLPLIVQKSDGGYNYATTDLAALRHRIQKEEAKRLIYVTDAGQANHFAGVFQVANRANWIPEDVEIVHVPFGLVLGEDGKKLKTRSGETVRLRDLLDEAVSRCREDLEKRLKEEEGREETEDFIANVAKVVGISAVKYADLSQNRTGNYKFSFDKMLALKGNTAPYMLYAYARTQSISRKGDIDYE-------NLGENIKIVLKEEAEFTLAKHILQLDEVIAEVEKELLPNRLCEYLYQLSEKFNQFFENCPVLKSEEP-IKTSRLALCDLTARTLKLGLNLLGIEVLERM 586          
BLAST of NO09G02200 vs. NCBI_GenBank
Match: WP_016860470.1 (arginine--tRNA ligase [Fischerella muscicola])

HSP 1 Score: 651.0 bits (1678), Expect = 4.400e-183
Identity = 335/594 (56.40%), Postives = 440/594 (74.07%), Query Frame = 0
Query:  126 RQALASQVRESLHAAFGADAEGADAMVTPATRPEFGDYQCNAALALAKRLKAKPREVAEKLKEELEGRTQEWCEPLEIAGPGFINVKMKNAFVEQKVNGMLSDTSGRLGVARPQKPQKVVVDFSSPNIAKEMHVGHLRSTVIGDTVARVLEFLGHDVMRLNHVGDWGTQFGMLITHLKEAHPEVLAEEGKSETGIGDLVEFYKAAKVRFDEDEEFKLKSRQEVVNLQGGKEETLKAWRTLCALSRGEFQKIYDALGVRLEERGESFYNPMLGDVISDLDKSGLLVESEGARVVFLDGYVTREGERQPFIVQKTDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQAKFVPDSVQLKHVPFGLVQGEDGKKFKTRAGDTVKLKDLLDEAVRIARDDLIKR-SEEGGYLPPDDLEQSAKTIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKDMGGEXXXXXXXXXXXXXXXXLQEPAELNLARQLIKLTELLQRVEADLYPHVLCEYMYDISQKFNQFYESCPVNTAPTPGLVQSRRTLCALTAQVLRLCLDLLGIEVLQRM 719
            ++ L  +++++L AAFGA+  G D ++ PA+ P+FGDYQ N AL+LAKRL  +PR +A+ + ++L+    + C+P E+AGPGFIN+K+   ++E ++  M +D+  RLGVA+ + P++ +VDFSSPNIAKEMHVGHLRST+IGD++AR+LEF GHDV+RLNHVGDWGTQFGMLIT+L+E +PE L      +  IGDLV FY+ AK RFDEDE F+ ++RQEVV LQ G E+T+ AW+ LC  SR EFQ IYD L ++++ERGESFYNP+L  V+ +L+++GLLVE +GA+ VFL+G+  +EGE  P IVQK+DGG+ YATTDLAA R+R  E+ A+RI+YVTDAGQA+HF QVFQV R+A +VPD V+L HVPFGLV GEDGKKFKTR+GDTV+L+DLLDEA+  +R DL  R +EEG     +   + AK +G+ AVKYADLS NR S+Y FSY KMLSL GNTAPYMLYAY R Q I R   GG                 L+E  EL LA+ L++L E++  VE DL P+ LCEY+Y +S KFN+FYE+CPV  +  P +  SR  LC LTA+ L+L L LLGI+VL+RM
Sbjct:    5 QELLKEKLQQALVAAFGAELTGVDPVLVPASNPKFGDYQANVALSLAKRLGQQPRAIAQAIVDKLD--VADICKPPEVAGPGFINLKLTTEYLEAQIATMQADS--RLGVAKAKTPKREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLREVYPEALTTANALD--IGDLVTFYRQAKKRFDEDEAFQEQARQEVVRLQAGAEDTIHAWKLLCEQSRKEFQVIYDLLDIKVQERGESFYNPLLPKVVENLEQTGLLVEDQGAKCVFLEGFTNKEGEPLPLIVQKSDGGYNYATTDLAAIRYRIQEDHAKRIIYVTDAGQANHFAQVFQVVRKAGWVPDDVELVHVPFGLVLGEDGKKFKTRSGDTVRLRDLLDEAIARSRADLENRLTEEGRQETEEFKAKVAKVVGISAVKYADLSQNRTSNYVFSYDKMLSLKGNTAPYMLYAYVRTQGISR---GGN---VDFEKLGTDAKIMLKEDTELTLAKHLLQLDEIISEVEQDLLPNRLCEYLYQLSDKFNKFYENCPVLKSEEP-IRTSRLALCYLTARTLKLGLSLLGIQVLERM 585          
BLAST of NO09G02200 vs. NCBI_GenBank
Match: WP_035990551.1 (arginine--tRNA ligase [Leptolyngbya sp. KIOST-1])

HSP 1 Score: 650.2 bits (1676), Expect = 7.500e-183
Identity = 339/591 (57.36%), Postives = 429/591 (72.59%), Query Frame = 0
Query:  129 LASQVRESLHAAFGADAEGADAMVTPATRPEFGDYQCNAALALAKRLKAKPREVAEKLKEELEGRTQEWCEPLEIAGPGFINVKMKNAFVEQKVNGMLSDTSGRLGVARPQKPQKVVVDFSSPNIAKEMHVGHLRSTVIGDTVARVLEFLGHDVMRLNHVGDWGTQFGMLITHLKEAHPEVLAEEGKSETGIGDLVEFYKAAKVRFDEDEEFKLKSRQEVVNLQGGKEETLKAWRTLCALSRGEFQKIYDALGVRLEERGESFYNPMLGDVISDLDKSGLLVESEGARVVFLDGYVTREGERQPFIVQKTDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQAKFVPDSVQLKHVPFGLVQGEDGKKFKTRAGDTVKLKDLLDEAVRIARDDLIKRSEEGGYLPPDD-LEQSAKTIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKDMGGEXXXXXXXXXXXXXXXXLQEPAELNLARQLIKLTELLQRVEADLYPHVLCEYMYDISQKFNQFYESCPVNTAPTPGLVQSRRTLCALTAQVLRLCLDLLGIEVLQRM 719
            L ++  ++L AAFG D  G D M+ P + P+FGDYQ N A++LAK LK KPR++A ++ E+L+    +  EP EIAGPGFIN++ K  ++E ++  M +D   RLGV   + PQKV+VDFSSPNIAKEMHVGHLRST+IGD++ARV EF+GHDV+RLNHVGDWGTQFGMLITHL+EA PE L  E  S   IGDLV FYK AK RFDED++FK +SR+ VV LQ G     +AW+ LC  SR EFQ IYD L + ++ERGESFYNP+L DV+ DL+  GLLVE +GA+VVF++G+  ++G+  P I+QKTDGG+ YATTDLAA R+R  ++ AER+LYV DAGQ +HF QVFQVA +A ++P  V+  HVPFG+VQGEDGKKFKTR+GDT+KLKDLLDEAV  AR DL  R E  G    D  ++Q A+T+G+GAVKYADLS NR S+Y FS+ KML+L GNTAPYMLYAY R+Q I RK  GG                 L++ +E  LAR L++L E+L  V  DLYP+ LC+Y++++SQKFNQFY+ C V  A  P    SR  LC LTA+ L+L L LLGI VL+RM
Sbjct:    8 LTARFDQALVAAFGPDLAGTDPMLVPTSNPKFGDYQANLAMSLAKPLKQKPRDIASQIVEKLD--LSDLFEPPEIAGPGFINLRFKTEYLEDQLRAMQADP--RLGVEPVKMPQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVQEFMGHDVLRLNHVGDWGTQFGMLITHLREACPEAL--EAGSSVDIGDLVAFYKQAKKRFDEDDDFKTRSREAVVELQAGDAIATQAWQALCEQSRQEFQTIYDRLDIDIKERGESFYNPLLADVVRDLEALGLLVEDQGAKVVFVEGFTNKDGDPLPLIIQKTDGGYNYATTDLAAIRYRTQQDGAERVLYVVDAGQGNHFAQVFQVAAKAGWLPAGVEFTHVPFGVVQGEDGKKFKTRSGDTIKLKDLLDEAVSRARADLTARIETEGRQETDAFVQQVAETVGIGAVKYADLSQNRTSNYIFSFDKMLALQGNTAPYMLYAYVRVQGIARK--GG----IDLDNLPAEARIHLEDDSEFALARHLLQLDEVLGEVAQDLYPNRLCQYLFELSQKFNQFYDRCSVLQAAEPQRT-SRLLLCDLTAKTLKLGLSLLGIRVLERM 585          
BLAST of NO09G02200 vs. NCBI_GenBank
Match: WP_096615562.1 (arginine--tRNA ligase [Calothrix sp. NIES-4101] >BAZ38541.1 arginyl-tRNA-synthetase [Calothrix sp. NIES-4101])

HSP 1 Score: 650.2 bits (1676), Expect = 7.500e-183
Identity = 332/594 (55.89%), Postives = 440/594 (74.07%), Query Frame = 0
Query:  126 RQALASQVRESLHAAFGADAEGADAMVTPATRPEFGDYQCNAALALAKRLKAKPREVAEKLKEELEGRTQEWCEPLEIAGPGFINVKMKNAFVEQKVNGMLSDTSGRLGVARPQKPQKVVVDFSSPNIAKEMHVGHLRSTVIGDTVARVLEFLGHDVMRLNHVGDWGTQFGMLITHLKEAHPEVLAEEGKSETGIGDLVEFYKAAKVRFDEDEEFKLKSRQEVVNLQGGKEETLKAWRTLCALSRGEFQKIYDALGVRLEERGESFYNPMLGDVISDLDKSGLLVESEGARVVFLDGYVTREGERQPFIVQKTDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQAKFVPDSVQLKHVPFGLVQGEDGKKFKTRAGDTVKLKDLLDEAVRIARDDLIKRSEEGGYLPPDDLEQS-AKTIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKDMGGEXXXXXXXXXXXXXXXXLQEPAELNLARQLIKLTELLQRVEADLYPHVLCEYMYDISQKFNQFYESCPVNTAPTPGLVQSRRTLCALTAQVLRLCLDLLGIEVLQRM 719
            ++ L  +V ++L AAFG +  G D M+ PA+ P+FGDYQ N +L L+K+L  +PR +A+++ ++L+    + CE  EIAGPGFIN+++K  ++E ++N + +DT  RLGVA+ + PQ+ +VDFSSPNIAKEMHVGHLRST+IGD++AR+LEF+GHDV+RLNHVGDWGTQFGMLIT+L+E  P+ L      E  I DLVEFYK AK RFDED+ FK  +RQEVV LQ G E+TL AW+ LCA SR EFQ+IYD L V+L ERGESFYNP+L DV+ DL+KSGLL ES+ A+VVFLDG+  +EG+  P I+QK+DGG+ YATTDLAA R+R  +++A+RI+Y+TDAGQ+ HF  VFQVAR+A ++PD V++ HV FG+V GEDGK+ +TRAGDTV+L+DLLDEAV  +R DL  R +E G    D+ + + A+ +G+ AVKYADLS NR +DYKFS+ KMLSL GNTAPYMLY+YAR QSI R+                     LQ  +E  LA+ L++L E++  VE +L PH LCEY+Y +S KFN+FYE+CPV  +    +  SR  LC LTA+ L+L L+LLGI+VL+RM
Sbjct:    5 QEQLKLKVEQALVAAFGTELSGTDPMLVPASNPKFGDYQANLSLPLSKKLGKQPRIIAQQIVDKLD--VSDICEAPEIAGPGFINLRLKTDYIEAQLNAIQADT--RLGVAKVKHPQREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFIGHDVLRLNHVGDWGTQFGMLITYLREVSPDALTTANALE--IADLVEFYKQAKKRFDEDDNFKETARQEVVRLQSGAEDTLHAWKLLCAQSREEFQEIYDLLDVKLCERGESFYNPLLADVVKDLEKSGLLEESDRAKVVFLDGFTNKEGQPLPLIIQKSDGGYNYATTDLAAIRYRTQQDEAKRIIYLTDAGQSGHFAGVFQVARRAGWIPDDVEVVHVGFGMVLGEDGKRLRTRAGDTVRLRDLLDEAVMRSRADLDMRLQESGREETDEFKANVAQVVGISAVKYADLSQNRMTDYKFSFDKMLSLKGNTAPYMLYSYARTQSIARE-------GNIDFQQLGDVKIQLQADSEFTLAKHLLQLDEVITEVEQELLPHRLCEYLYQLSDKFNKFYENCPVLKSEAT-VRTSRLALCYLTARTLKLGLNLLGIQVLERM 584          
BLAST of NO09G02200 vs. NCBI_GenBank
Match: WP_017288333.1 (arginine--tRNA ligase [Leptolyngbya boryana] >BAS57073.1 arginyl-tRNA synthetase [Leptolyngbya boryana IAM M-101] >BAS63421.1 arginyl-tRNA synthetase [Leptolyngbya boryana dg5] >BAY56740.1 ArgS protein [Leptolyngbya boryana NIES-2135])

HSP 1 Score: 648.7 bits (1672), Expect = 2.200e-182
Identity = 338/594 (56.90%), Postives = 432/594 (72.73%), Query Frame = 0
Query:  129 LASQVRESLHAAFGADAEGADAMVTPATRPEFGDYQCNAALALAKRLKAKPREVAEKLKEELEGRTQEWCEPLEIAGPGFINVKMKNAFVEQKVNGMLSDTSGRLGVARPQKPQKVVVDFSSPNIAKEMHVGHLRSTVIGDTVARVLEFLGHDVMRLNHVGDWGTQFGMLITHLKEAHPEVLAEEGKSETGIGDLVEFYKAAKVRFDEDEEFKLKSRQEVVNLQGGKEETLKAWRTLCALSRGEFQKIYDALGVRLEERGESFYNPMLGDVISDLDKSGLLVESEGARVVFLDGYVTREGERQPFIVQKTDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQAKFVPDSVQLKHVPFGLVQGEDGKKFKTRAGDTVKLKDLLDEAVRIARDDLIKR-SEEGGYLPPDDLEQSAKTIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKDMGGEXXXXXXXXXXXXXXXXLQEPAELNLARQLIKLTELLQRVEADLYPHVLCEYMYDISQKFNQFY---ESCPVNTAPTPGLVQSRRTLCALTAQVLRLCLDLLGIEVLQRM 719
            L +++  +L +AFGAD  G D M+ P + P+FGDYQ N A++LAKRL   PR +A+++ ++L+    + CEP EIAGPGFIN+ +K A+++ ++  M  D+  RLG+A  ++P+KVVVDFSSPNIAKEMHVGHLRST+IGD++AR+LEF GHDV+RLNHVGDWGTQFGMLIT+L+E  PE L      +  +GDLV FYK AK RFDED EF+ +SRQEVV LQ G E+TL+AWR LC  SR EFQ IYD L ++L ERGESFYN  LG V+ DLD+ GLLVE +GA+ VFL+G+  REG   P I+QK+DGG+ YATTDLAA R+R  +++++R++YVTDAGQA+HF QVFQVAR+A ++P+SV++ HVPFGLVQGEDGKK KTR+GDTV+L+DLLDEAV  AR D+  R   E      + ++Q AKT+GL AVKYADLS NR S+Y FSY KML L GNTAPYMLYAYARIQ I RK                     L+   EL LA+ L++ +  L  VE DL+P+ LC+Y++ +SQKFN FY   +  PV  AP P    SR  LC LTA+ L+L L LLGI+VL+RM
Sbjct:    8 LKNRLEAALVSAFGADLAGTDPMLVPTSNPKFGDYQANVAMSLAKRLGKAPRAIAQEISQQLQ--IDDLCEPPEIAGPGFINLTLKPAYLQTQLTAMAGDS--RLGIAAVKEPKKVVVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLREVAPEALTTADALD--LGDLVAFYKKAKQRFDEDSEFQERSRQEVVRLQSGAEDTLRAWRLLCDQSRREFQVIYDLLDIQLTERGESFYNSRLGQVVEDLDQLGLLVEDQGAKCVFLEGFTNREGNPLPLIIQKSDGGYNYATTDLAAIRYRVQQDQSDRLIYVTDAGQANHFAQVFQVARRAGWIPESVEIVHVPFGLVQGEDGKKLKTRSGDTVRLRDLLDEAVERARADIEARLVAEERQESENFIDQVAKTVGLSAVKYADLSQNRTSNYIFSYDKMLDLKGNTAPYMLYAYARIQGISRK------GDIDFTQLGSDVQMVLEHETELALAKHLLQFSTALSEVEQDLFPNRLCDYLFQLSQKFNVFYDREQGVPVLNAPEPART-SRLVLCDLTARTLKLGLSLLGIQVLERM 588          
BLAST of NO09G02200 vs. NCBI_GenBank
Match: XP_002180416.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47824.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 647.9 bits (1670), Expect = 3.700e-182
Identity = 327/575 (56.87%), Postives = 414/575 (72.00%), Query Frame = 0
Query:  151 MVTPATRPEFGDYQCNAALALAKRLKAKPREVAEKLKEELEGRTQEWCEPLEIAGPGFINVKMKNAFVEQKVNGMLSDTSGRLGVARPQKPQKVVVDFSSPNIAKEMHVGHLRSTVIGDTVARVLEFLGHDVMRLNHVGDWGTQFGMLITHLKEAHPEVLAEEGKSETGIGDLVEFYKAAKVRFDEDEEFKLKSRQEVVNLQGGKEETLKAWRTLCALSRGEFQKIYDALGVR-LEERGESFYNPMLGDVISDLDKSGLLVESEGARVVFLDGYVTREGERQPFIVQKTDGGFLYATTDLAAARHRAL------EEKAERILYVTDAGQASHFDQVFQVARQAKFVPDSVQLKHVPFGLVQGEDGKKFKTRAGDTVKLKDLLDEAVRIARDDLIKRSEEGGYLPPDDLEQSAKTIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKDMGGEXXXXXXXXXXXXXXXXLQEPAELNLARQLIKLTELLQRVEADLYPHVLCEYMYDISQKFNQFYESCPVNTAPTPGLVQSRRTLCALTAQVLRLCLDLLGIEVLQRM 719
            MVTPAT+ EFGDYQ NAA+ LAK L   PRE A ++ + L+ + Q + E  EIAGPGF+N++ + +++ Q V+ M  D  GRL V R  + QK+VVDFSSPNIAKEMHVGHLRST+IGDT+  VLEF GH+V RLNHVGDWGTQFGML+ HL++ +P  L  +   +  +GDLV+ YKAAK RFDED+EFK ++R+ VV LQ G EE L AW +LCA SR E+QKIYD L +  L ERGESFYNP L DV+ +L + GL VES+GA VV+L+GY  R+G   P IV+K+DGGF YATTDLAA RHR L       E+A+R+LYVTDAGQA HF+ VF+  + A F  +   L+HVPFGLVQGEDGKKF TR+G+TVKLKDLLDEAVRI+  DL KR+E       D ++  A+ +G+GAVKYADLS+NRES+Y+FSY +MLSL+GNTAPYMLYAYAR+  I+RK  G E                +   +EL L R L+KL ++L  VE +LYP+ +C+Y+++ SQKFNQFYESC VN A +  +  SR +LC  TA  +RL L LLGIE L++M
Sbjct:    1 MVTPATKTEFGDYQVNAAMGLAKALNLSPRECAAQIVKALQPKIQSFMEEPEIAGPGFVNLRFRTSYLTQAVSSMAGDAQGRLAVPRTAQTQKIVVDFSSPNIAKEMHVGHLRSTIIGDTLCNVLEFAGHEVTRLNHVGDWGTQFGMLVEHLRDEYPAALRSDTADDVDLGDLVQLYKAAKKRFDEDDEFKTRAREGVVKLQAGNEEELAAWESLCAASRKEYQKIYDRLQIEGLVERGESFYNPFLKDVVDELVEKGLAVESDGALVVYLEGYTNRDGSPLPMIVRKSDGGFNYATTDLAAMRHRTLMPRAESGERADRVLYVTDAGQAQHFEMVFEAGKVAGFCREGASLEHVPFGLVQGEDGKKFATRSGETVKLKDLLDEAVRISGADLKKRNENVDQEFLDRVDNVARIVGIGAVKYADLSMNRESNYRFSYDRMLSLNGNTAPYMLYAYARVCGIIRKASGQE--GTGAIDWPKASEIMITHESELELIRNLVKLPDVLNEVERELYPNRMCDYLFETSQKFNQFYESCSVNKAESEEIKASRLSLCTATAGTIRLLLTLLGIETLEKM 573          
BLAST of NO09G02200 vs. NCBI_GenBank
Match: WP_102171113.1 (arginine--tRNA ligase [Fischerella thermalis] >PMB00934.1 arginine--tRNA ligase [Fischerella thermalis CCMEE 5268])

HSP 1 Score: 647.5 bits (1669), Expect = 4.800e-182
Identity = 333/594 (56.06%), Postives = 436/594 (73.40%), Query Frame = 0
Query:  126 RQALASQVRESLHAAFGADAEGADAMVTPATRPEFGDYQCNAALALAKRLKAKPREVAEKLKEELEGRTQEWCEPLEIAGPGFINVKMKNAFVEQKVNGMLSDTSGRLGVARPQKPQKVVVDFSSPNIAKEMHVGHLRSTVIGDTVARVLEFLGHDVMRLNHVGDWGTQFGMLITHLKEAHPEVLAEEGKSETGIGDLVEFYKAAKVRFDEDEEFKLKSRQEVVNLQGGKEETLKAWRTLCALSRGEFQKIYDALGVRLEERGESFYNPMLGDVISDLDKSGLLVESEGARVVFLDGYVTREGERQPFIVQKTDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQAKFVPDSVQLKHVPFGLVQGEDGKKFKTRAGDTVKLKDLLDEAVRIARDDLIKRSEEGGYLPPDDLEQS-AKTIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKDMGGEXXXXXXXXXXXXXXXXLQEPAELNLARQLIKLTELLQRVEADLYPHVLCEYMYDISQKFNQFYESCPVNTAPTPGLVQSRRTLCALTAQVLRLCLDLLGIEVLQRM 719
            ++ L  +++++L  AFGA+  G D ++  A+ P+FGDYQ N AL+LAKRL  +PR +A+ + ++L+    + C+P E+AGPGFIN+K+   ++E ++  M +D+  RLGVA+ + P++ +VDFSSPNIAKEMHVGHLRST+IGD++AR+LEF GHDV+RLNHVGDWGTQFGMLIT+L+E +PE L      +  IGDLV FYK AK RFDEDE F+ ++RQEVV LQ G  +T+ AW+ LC  SR EFQ IYD L ++++ERGESFYNP+L  V+ DL+++GLLVE +GA+ VFL+G+  +EGE  P IVQK+DGG+ YATTDLAA R+R LE+ A+RI+YVTDAGQA+HF QVFQVA +A +VPD V+L HVPFGLV GEDGKKFKTR+GDTV+L+DLLDEA+  AR DL  R  + G    +  + + AK +G+ AVKYADLS NR S+Y FSY KMLSL GNTAPYMLYAY R Q I R+                     LQE  EL LA+ L++L E++  VE DL P+ LCEY+Y +S KFN+FYE+CPV  +  P +  SR  LC LTA+ L+L L LLGI+VL+RM
Sbjct:    5 QELLKEKLQQALVTAFGAEFAGVDPVLVAASNPKFGDYQANVALSLAKRLGQQPRAIAQAIVDQLD--ISDICKPPEVAGPGFINLKLTTEYLEAQLAAMQADS--RLGVAKAKTPKREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVYPEALTTANALD--IGDLVTFYKQAKKRFDEDEAFQEQARQEVVRLQAGAADTIHAWKLLCEQSRTEFQVIYDLLDIKVQERGESFYNPLLPKVVEDLEQAGLLVEDQGAKCVFLEGFTNKEGEPLPLIVQKSDGGYNYATTDLAAVRYRILEDHAKRIIYVTDAGQANHFAQVFQVAYKAGWVPDDVELVHVPFGLVLGEDGKKFKTRSGDTVRLRDLLDEAIARARADLENRLIQEGRQETEQFKANVAKVVGISAVKYADLSQNRTSNYVFSYDKMLSLKGNTAPYMLYAYVRTQGISRE------GNVDFEKLGTDAKILLQEDTELTLAKHLLQLDEIISDVEQDLLPNRLCEYLYQLSDKFNKFYENCPVLKSEEP-IRTSRLALCYLTARTLKLGLSLLGIQVLERM 585          
BLAST of NO09G02200 vs. NCBI_GenBank
Match: WP_106882170.1 (arginine--tRNA ligase [filamentous cyanobacterium CCP5] >PSN17850.1 arginine--tRNA ligase [filamentous cyanobacterium CCP5])

HSP 1 Score: 647.5 bits (1669), Expect = 4.800e-182
Identity = 335/591 (56.68%), Postives = 428/591 (72.42%), Query Frame = 0
Query:  129 LASQVRESLHAAFGADAEGADAMVTPATRPEFGDYQCNAALALAKRLKAKPREVAEKLKEELEGRTQEWCEPLEIAGPGFINVKMKNAFVEQKVNGMLSDTSGRLGVARPQKPQKVVVDFSSPNIAKEMHVGHLRSTVIGDTVARVLEFLGHDVMRLNHVGDWGTQFGMLITHLKEAHPEVLAEEGKSETGIGDLVEFYKAAKVRFDEDEEFKLKSRQEVVNLQGGKEETLKAWRTLCALSRGEFQKIYDALGVRLEERGESFYNPMLGDVISDLDKSGLLVESEGARVVFLDGYVTREGERQPFIVQKTDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQAKFVPDSVQLKHVPFGLVQGEDGKKFKTRAGDTVKLKDLLDEAVRIARDDLIKR-SEEGGYLPPDDLEQSAKTIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKDMGGEXXXXXXXXXXXXXXXXLQEPAELNLARQLIKLTELLQRVEADLYPHVLCEYMYDISQKFNQFYESCPVNTAPTPGLVQSRRTLCALTAQVLRLCLDLLGIEVLQRM 719
            L ++  +++ AAFG D  G D ++  A+ P+FGDYQ N A++L KRLK  PR +A  + E L+    + CEP EIAGPGFIN++++  ++E ++   +   S RL VA   +PQKV+VDFSSPNIAKEMHVGHLRST+IGD+++RVLEF+GHDV+RLNHVGDWGTQFGMLITHLK A PE L  E  +   IGDLV FYK AK RFD DE+FK +SR+ VV LQ G E   +AW+ LCA SR EFQKIYD L + ++ERGESFYNP+L DV+ DL+  GLLVE +GA+VVF DG+  +EG+  P I+QK+DGG+ YATTDLAA R+R  ++ AERILYV DAGQ +HF QVFQVA +A +VP+ V+  HVPFG+VQGEDGKKFKTR+GDTV+LKDLLD+AV IAR DL  R + E     P+ +   A+ +G+GAVKYADLS NR S+Y FSY KML+L GNTAPYMLYAY R+Q I RK  GG                 L++  E  LAR L++L ++++ +  DLYP+ LC+Y++++SQKFNQFY+ C V  A  P    SR  LC LTA+ L+L L LLGI+VL+RM
Sbjct:    8 LKTRFEQAMVAAFGEDLAGTDPILVSASNPKFGDYQANVAMSLTKRLKQNPRAIATAIVENLD--VSDCCEPPEIAGPGFINLRLRPDYLEAQLK--VVQGSDRLAVAPSDQPQKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRVLEFMGHDVLRLNHVGDWGTQFGMLITHLKAACPEAL--ETGASVDIGDLVTFYKQAKQRFDADEDFKQRSREAVVALQSGDETATRAWKALCAQSRQEFQKIYDRLDIEIQERGESFYNPLLADVVKDLEDQGLLVEDQGAKVVFADGFTNKEGDPLPLIIQKSDGGYNYATTDLAAVRYRTTQDGAERILYVVDAGQGNHFAQVFQVAEKAGWVPEGVEFTHVPFGVVQGEDGKKFKTRSGDTVRLKDLLDQAVAIARADLETRIASENRDESPEFIADVAEKVGIGAVKYADLSQNRTSNYIFSYDKMLALQGNTAPYMLYAYVRVQGISRK--GG----IDFEHLPAEARIHLEDDTEFALARHLLQLDQVVEELAHDLYPNRLCQYLFELSQKFNQFYDRCSVLQANEPQRT-SRLLLCDLTAKTLKLGLSLLGIQVLERM 585          
BLAST of NO09G02200 vs. NCBI_GenBank
Match: WP_053459254.1 (arginine--tRNA ligase [Hapalosiphon sp. MRB220] >KOP22945.1 arginyl-tRNA synthetase [Hapalosiphon sp. MRB220])

HSP 1 Score: 647.1 bits (1668), Expect = 6.300e-182
Identity = 331/594 (55.72%), Postives = 437/594 (73.57%), Query Frame = 0
Query:  126 RQALASQVRESLHAAFGADAEGADAMVTPATRPEFGDYQCNAALALAKRLKAKPREVAEKLKEELEGRTQEWCEPLEIAGPGFINVKMKNAFVEQKVNGMLSDTSGRLGVARPQKPQKVVVDFSSPNIAKEMHVGHLRSTVIGDTVARVLEFLGHDVMRLNHVGDWGTQFGMLITHLKEAHPEVLAEEGKSETGIGDLVEFYKAAKVRFDEDEEFKLKSRQEVVNLQGGKEETLKAWRTLCALSRGEFQKIYDALGVRLEERGESFYNPMLGDVISDLDKSGLLVESEGARVVFLDGYVTREGERQPFIVQKTDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQAKFVPDSVQLKHVPFGLVQGEDGKKFKTRAGDTVKLKDLLDEAVRIARDDLIKRSEEGGYLPPDDLEQS-AKTIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKDMGGEXXXXXXXXXXXXXXXXLQEPAELNLARQLIKLTELLQRVEADLYPHVLCEYMYDISQKFNQFYESCPVNTAPTPGLVQSRRTLCALTAQVLRLCLDLLGIEVLQRM 719
            ++ L  +++++L AAFGA+  G D ++ PA+ P+FGDYQ N AL+LAKRL  +PR +A+ + ++L+    + C+  E+AGPGFIN+K+   ++E ++  M +D+  RLGVA+ + P++ +VDFSSPNIAKEMHVGHLRST+IGD++AR+LEF GHDV+RLNHVGDWGTQFGMLIT+L+E +PE L      E  IGDLV FYK AK RFDEDE F+ ++R+EVV LQ G E+T+ AW+ LC  SR EFQ IYD L ++++ERGESFYNP+L  V+ DL+K+GLLVE +GA+ VFL+G+  +EGE  P IVQK+DGG+ YATTDLAA R+R  E+ A+RI+YVTDAGQA+HF QVFQV  +A ++PD V+L HVPFGLV GEDGKKFKTR+GDTV+L+DLLDEA+  +R DL  R  + G    ++ + + AK +G+ AVKYADLS NR S+Y FSY KMLSL GNTAPYMLYAY R Q I R+                     L+E  EL LA+ L++L E++  VE DL P+ LCEY+Y +S KFN+FYE+CPV  +  P +  SR  LC LTA+ L+L L LLGI+VL+RM
Sbjct:    5 QELLKEKLQQALVAAFGAELTGVDPVLVPASNPKFGDYQANVALSLAKRLGQQPRAIAQAIVDKLD--VADICKLPEVAGPGFINLKLTTEYLEAQIATMQADS--RLGVAKAKTPKREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLREVYPEALTTANALE--IGDLVTFYKQAKKRFDEDEAFQEQARKEVVRLQAGAEDTIHAWKLLCEQSRKEFQVIYDLLDIKVQERGESFYNPLLPKVVEDLEKTGLLVEDQGAKCVFLEGFTNKEGEPLPLIVQKSDGGYNYATTDLAAIRYRIQEDHAKRIIYVTDAGQANHFAQVFQVVHKAGWIPDDVELVHVPFGLVLGEDGKKFKTRSGDTVRLRDLLDEAIARSRADLENRLTQEGRQETEEFKTNVAKVVGISAVKYADLSQNRTSNYIFSYDKMLSLKGNTAPYMLYAYVRTQGISRE------GNVDFEKLGTNAKIMLKEDTELTLAKHLLQLDEIISEVEQDLLPNRLCEYLYQLSDKFNKFYENCPVLKSEEP-IRTSRLALCYLTARTLKLGLSLLGIQVLERM 585          
BLAST of NO09G02200 vs. NCBI_GenBank
Match: WP_102187032.1 (arginine--tRNA ligase [Fischerella thermalis] >PMB40395.1 arginine--tRNA ligase [Fischerella thermalis CCMEE 5205])

HSP 1 Score: 647.1 bits (1668), Expect = 6.300e-182
Identity = 332/594 (55.89%), Postives = 435/594 (73.23%), Query Frame = 0
Query:  126 RQALASQVRESLHAAFGADAEGADAMVTPATRPEFGDYQCNAALALAKRLKAKPREVAEKLKEELEGRTQEWCEPLEIAGPGFINVKMKNAFVEQKVNGMLSDTSGRLGVARPQKPQKVVVDFSSPNIAKEMHVGHLRSTVIGDTVARVLEFLGHDVMRLNHVGDWGTQFGMLITHLKEAHPEVLAEEGKSETGIGDLVEFYKAAKVRFDEDEEFKLKSRQEVVNLQGGKEETLKAWRTLCALSRGEFQKIYDALGVRLEERGESFYNPMLGDVISDLDKSGLLVESEGARVVFLDGYVTREGERQPFIVQKTDGGFLYATTDLAAARHRALEEKAERILYVTDAGQASHFDQVFQVARQAKFVPDSVQLKHVPFGLVQGEDGKKFKTRAGDTVKLKDLLDEAVRIARDDLIKRSEEGGYLPPDDLEQS-AKTIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYARIQSILRKDMGGEXXXXXXXXXXXXXXXXLQEPAELNLARQLIKLTELLQRVEADLYPHVLCEYMYDISQKFNQFYESCPVNTAPTPGLVQSRRTLCALTAQVLRLCLDLLGIEVLQRM 719
            ++ L  +++++L  AFGA+  G D ++  A+ P+FGDYQ N AL+LAKRL  +PR +A+ + ++L+    + C+P E+AGPGFIN+K+   ++E ++  M +D+  RLGVA+ + P++ +VDFSSPNIAKEMHVGHLRST+IGD++AR+LEF GHDV+RLNHVGDWGTQFGMLIT+L+E +PE L      +  IGDLV FYK AK RFDEDE F+ ++RQEVV LQ G  +T+ AW+ LC  SR EFQ IYD L ++++ERGESFYNP+L  V+ DL+++GLLVE +GA+ VFL+G+  +EGE  P IVQK+DGG+ YATTDLAA R+R  E+ A+RI+YVTDAGQA+HF QVFQV R+A +VPD V+L HVPFGLV GEDGKKFKTR+GDTV+L+DLLDEA+  AR DL  R  + G    +  + + AK +G+ AVKYADLS NR S+Y FSY KMLSL GNTAPYMLYAY R Q I R+                     LQE  EL LA+ L++L E++  VE DL P+ LCEY+Y +S KFN+FYE+CPV  +  P +  SR  LC LTA+ L+L L LLGI+VL+RM
Sbjct:    5 QELLKEKLQQALVTAFGAEFAGVDPVLVAASNPKFGDYQANVALSLAKRLGQQPRAIAQAIVDQLD--VSDICKPPEVAGPGFINLKLTTEYLEAQLAAMQADS--RLGVAKAKTPKREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVYPEALTTANALD--IGDLVTFYKQAKKRFDEDEAFQEQARQEVVRLQAGAADTIHAWKLLCEQSRAEFQVIYDLLDIKVQERGESFYNPLLPKVVEDLEQTGLLVEDQGAKCVFLEGFTNKEGEPLPLIVQKSDGGYNYATTDLAAIRYRIQEDHAKRIIYVTDAGQANHFAQVFQVVRKAGWVPDDVELVHVPFGLVLGEDGKKFKTRSGDTVRLRDLLDEAIARARADLENRLIQEGRQETEQFKANVAKVVGISAVKYADLSQNRTSNYVFSYDKMLSLKGNTAPYMLYAYVRTQGISRE------GNVDFEKLDTDAKILLQEDTELTLAKHLLQLDEIISDVEQDLLPNRLCEYLYQLSDKFNKFYENCPVLKSEEP-IRTSRLALCYLTARTLKLGLSLLGIQVLERM 585          
The following BLAST results are available for this feature:
BLAST of NO09G02200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_015121209.14.400e-18356.38arginine--tRNA ligase [Rivularia sp. PCC 7116] >AF... [more]
WP_016860470.14.400e-18356.40arginine--tRNA ligase [Fischerella muscicola][more]
WP_035990551.17.500e-18357.36arginine--tRNA ligase [Leptolyngbya sp. KIOST-1][more]
WP_096615562.17.500e-18355.89arginine--tRNA ligase [Calothrix sp. NIES-4101] >B... [more]
WP_017288333.12.200e-18256.90arginine--tRNA ligase [Leptolyngbya boryana] >BAS5... [more]
XP_002180416.13.700e-18256.87predicted protein [Phaeodactylum tricornutum CCAP ... [more]
WP_102171113.14.800e-18256.06arginine--tRNA ligase [Fischerella thermalis] >PMB... [more]
WP_106882170.14.800e-18256.68arginine--tRNA ligase [filamentous cyanobacterium ... [more]
WP_053459254.16.300e-18255.72arginine--tRNA ligase [Hapalosiphon sp. MRB220] >K... [more]
WP_102187032.16.300e-18255.89arginine--tRNA ligase [Fischerella thermalis] >PMB... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010737NSK010737Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02200.1NO09G02200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588758gene_4331Nannochloropsis oceanica (N. oceanica CCMP1779)gene
ARGRSgene2988Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02200.1NO09G02200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02200 ID=NO09G02200|Name=NO09G02200|organism=Nannochloropsis oceanica|type=gene|length=3395bp
GTCATTACTTTTACAAGTCTTGCTTGATTTCATTCATTTTATCCATATCT
TTCTCACGTGAATAATACACTGCACACGGTCCCCTCGTTCCTCCTCCCTA
GTCTCTTGTATGCTCAATGCCCCACCGCCGTCGCCGCTGCCACATCCGCC
GATTCTTCCAAGCACTTATTAACCACCCCTAGCAAATGCGCGTTTTCCAA
TGCTGCCGCCACCCTTTCTTTGTCATTTAATTGCTTGTTGACCGCCGCCT
CTGAAGCATGCGCCCCGGGCGTGACCTCAACGCGGACCTTGAACCGCTGC
GGCAACGACCGCAAAAGCTTCACGCGAATGCACAAGCCAATCAATGTTGC
CATCGAACAATGGGGGATGGTCGGGGTAAATCGGATACGGACAGTGGAGT
GAGCATCGTCCACACGGACGTTTTCGAGCGTGGCGACTTTCAGTTGCTCT
AGGGTCAAGGGATGCTCGGGGTCGTTCAGGTTTCGCACCAGCTCAAAGAC
TTCCTCAGATGTAAATACGTCGCGGGCCATCTCATCCCAGTCACCCTCGG
CCTCCGCAGCGGAAGGGGCCTCCTGTTGGGGTAGAGATAGAGTAGGGAGT
GATGAGGATGAGGAGGGGAGGAGGTCGATAGGAATGAGGAGCTCGTACGA
ACTTACCCTGCGCTTGCTCGCAACAGCGTAGATGGTAGGGTTGGCGTTTT
CCTTCATGGTCCTGAGGTGACAAATCTGTAGGATATTCGTTGCGTGCGCT
GAGGTTACAGACGCATTTCAAGGCATGAAAGAAGGACAGGACGACTCGGA
CTCCGGAGACGGGGCGCGGCGACTGACTGAAATGAATCCTTGCTTGCTTC
GCACAACCGCTGTTTCATCACTTGCATCCCGACTACCCCAAACAGGCAAT
GCGTCTCCTTTACGGACTCTTGATGCTCTTTCTAACTCAGCAGCTTGCCT
GTGGCAGCCGGCTTTTCGCAGCGTCAGCCTCAAGGAGGTCAAGCAGCAGC
ACTAGGGGAGGTCAACGACGACTCCTGCAGCAGCAGCTACAGCGCAGgta
aataaatgggcataacggcacgggatggacttcaaagacatacaaatatt
tatgtgtttacatatattcatataatgcacgtcgcgtcggtggccggcgc
gccagagacctagagcgaatcgtttctgtcctattccctgcaagcgccac
tctcctcctccaccagacagctggaaacgagtctttcgacatgcagctca
ttcctttctctcacacatccccagcagTCTATACACGGCCTTTTTACCAA
TCTGTAACAGTTTTTACACCCGATCACGACCCCGAGGCATGCCTTCCCCT
ACCTCCTCCTCTTCCTCTTCCTCTTCATCCCCCTCCTCCTCCTCATTCTC
CTCCACCTTCTCCTCACCGCAACATAAGCGCGCGCGCGTCGTCTCATTCT
CCACCATCCCTTTCTCTTTTCCATCCACTGCGACGCTCGACGACGGCAAC
TTTCGTCAAGCCCTTGCATCTCAAGTGCGCGAGTCTCTACACGCGGCCTT
TGGAGCTGATGCGGAGGGAGCTGATGCGATGGTCACGCCTGCAACGCGCC
CTGAATTTGGAGATTACCAGTGTAATGCTGCCTTGGCCCTGGCGAAGCGA
TTAAAAGCCAAGCCGAGAGAGGTGGCAGAGAAACTAAAGGAAGAGTTGGA
AGGACGAACGCAGGAGTGGTGCGAGCCTTTGGAGATTGCCGGACCGGGAT
TTATTAATGTCAAGATGAAAAATGCATTTGTGGAGCAAAAAGTGAATGGT
ATGCTTTCGGACACGTCGGGGAGGTTAGGTGTCGCACGGCCCCAGAAACC
ACAGAAAGTCGTAGTCGATTTTTCAAGCCCGAACATTGCGAAGGAGATGC
ATGTGGGGCATTTGAGAAGTACGGTTATTGGTGATACGGTTGCTAGGGTG
TTGGAGTTCCTTGGTCATGACGTGATGAGGTTGAACCATGTGGGTGATTG
GGGCACCCAGTTTGGTATGCTGATTACGCATTTGAAGGAGGCGCACCCCG
AGGTATTGGCGGAAGAGGGGAAGTCGGAGACGGGGATCGGGGACTTGGTG
GAGTTCTATAAGGCGGCGAAGGTGAGGTTTGATGAGGACGAGGAATTTAA
GCTGAAGAGTCGACAGGAGGTGGTGAACCTCCAGGGAGGGAAGGAGGAGA
CATTAAAAGCGTGGAGGACGCTGTGTGCTCTCTCGAGAGGCGAGTTTCAA
AAGATTTATGATGCACTAGGGGTGCGGTTGGAGGAGAGGGGGGAAAGTTT
TTATAACCCTATGTTGGGCGACGTAATCAGCGACCTGGACAAATCGGGTT
TGTTGGTTGAGAGCGAGGGGGCAAGGGTGGTGTTTTTGGATGGATACGTG
ACCCGAGAAGGAGAACGACAGCCGTTTATAGTCCAAAAAACGGATGGCGG
TTTCTTGTATGCTACGACTGATTTGGCGGCGGCGAGACACAGAGCTCTCG
AGGAGAAGGCGGAGAGAATCCTTTATGTAACGGACGCGGGGCAAGCTTCG
CATTTTGATCAGGTTTTCCAAGTGGCCCGTCAAGCCAAGTTCGTCCCGGA
CAGCGTCCAATTGAAACATGTTCCGTTCGGCCTAGTCCAGGGGGAGGACG
GGAAGAAGTTCAAAACTCGAGCAGGGGATACCGTCAAGCTTAAGGACCTC
CTCGACGAGGCCGTGCGCATCGCCCGCGATGATCTCATCAAACGCTCTGA
GGAGGGAGGTTACCTTCCCCCAGATGACCTGGAACAGAGTGCCAAGACAA
TCGGCCTTGGTGCGGTCAAATACGCCGATTTATCCCTTAATCGCGAATCG
GATTATAAATTTTCCTACAAAAAAATGTTGTCCCTAAGTGGGAACACTGC
CCCCTACATGCTCTACGCCTACGCGCGAATTCAAAGTATTTTGCGCAAAG
ATATGGGAGGGGAAGATGCCGGGGCAGCGGCGGCGGCGGGGACTACGACC
ACGCAGGTGGTGTTGCAGGAGCCGGCGGAGCTGAACCTGGCTCGGCAGTT
GATCAAACTCACCGAACTGTTACAAAGGGTAGAGGCTGACTTGTACCCGC
ATGTATTGTGTGAGTACATGTACGATATCAGTCAAAAATTCAACCAGTTT
TATGAAAGCTGCCCCGTCAATACGGCTCCGACCCCGGGGCTGGTGCAGTC
GCGTAGGACTTTGTGCGCTTTGACTGCACAGGTCTTGCGCCTGTGTCTGG
ACTTGTTGGGGATCGAGGTCTTGCAACGCATGTAAGGCTACCACAATAAG
TGTTACTGAGATAGGTGTGTGTGCACTGAACAAAGAATGAAGCCATAGAG
CACACACACTTTGGTGATTAGAATAAAGACGTTGTTGTGAGGTCA
back to top

protein sequence of NO09G02200.1

>NO09G02200.1-protein ID=NO09G02200.1-protein|Name=NO09G02200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=719bp
MRLLYGLLMLFLTQQLACGSRLFAASASRRSSSSTRGGQRRLLQQQLQRS
LYTAFLPICNSFYTRSRPRGMPSPTSSSSSSSSSPSSSSFSSTFSSPQHK
RARVVSFSTIPFSFPSTATLDDGNFRQALASQVRESLHAAFGADAEGADA
MVTPATRPEFGDYQCNAALALAKRLKAKPREVAEKLKEELEGRTQEWCEP
LEIAGPGFINVKMKNAFVEQKVNGMLSDTSGRLGVARPQKPQKVVVDFSS
PNIAKEMHVGHLRSTVIGDTVARVLEFLGHDVMRLNHVGDWGTQFGMLIT
HLKEAHPEVLAEEGKSETGIGDLVEFYKAAKVRFDEDEEFKLKSRQEVVN
LQGGKEETLKAWRTLCALSRGEFQKIYDALGVRLEERGESFYNPMLGDVI
SDLDKSGLLVESEGARVVFLDGYVTREGERQPFIVQKTDGGFLYATTDLA
AARHRALEEKAERILYVTDAGQASHFDQVFQVARQAKFVPDSVQLKHVPF
GLVQGEDGKKFKTRAGDTVKLKDLLDEAVRIARDDLIKRSEEGGYLPPDD
LEQSAKTIGLGAVKYADLSLNRESDYKFSYKKMLSLSGNTAPYMLYAYAR
IQSILRKDMGGEDAGAAAAAGTTTTQVVLQEPAELNLARQLIKLTELLQR
VEADLYPHVLCEYMYDISQKFNQFYESCPVNTAPTPGLVQSRRTLCALTA
QVLRLCLDLLGIEVLQRM*
back to top
Synonyms
Publications