NO09G01340, NO09G01340 (gene) Nannochloropsis oceanica

Overview
NameNO09G01340
Unique NameNO09G01340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1878
Alignment locationchr9:439870..441747 +

Link to JBrowse

Properties
Property NameValue
DescriptionOrn/Lys/Arg decarboxylase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:439870..441747 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036633Prn/Lys/Arg_de-COase_C_sf
IPR015424PyrdxlP-dep_Trfase
IPR000310Orn/Lys/Arg_deCO2ase_major_dom
IPR008286Prn/Lys/Arg_de-COase_C
Homology
BLAST of NO09G01340 vs. NCBI_GenBank
Match: WP_106546655.1 (aminotransferase class V-fold PLP-dependent enzyme [Chroococcidiopsis sp. CCALA 051] >PSM47770.1 arginine decarboxylase [Chroococcidiopsis sp. CCALA 051])

HSP 1 Score: 357.5 bits (916), Expect = 8.700e-95
Identity = 231/562 (41.10%), Postives = 312/562 (55.52%), Query Frame = 0
Query:   64 VEQSKTPLVEALALAATRIK-APFFFPGHKMGRGLPVGLSGPFARSAADADVVAKRRHVRDSVWQHDLPEIPELDNLFAPEGPIQEAEMLAAQAFGGAQRTWFLVNGSTAGXXXXXXXXXXXXXXXXXXXXXGASRISKVLLPRNVHKSAINGLILAGADPVFLSPVYDKEWDICHGIPIDGEGGLDDALKVHGPGGDIAAVLLVSPTYHGVIMDIKQAALLCARYKVPLIVDEAHGAHLAFLERDGQTAAIKPAAAAALEGALALGADLVVQSTHKTLTAVSQCAMMHAGNGPLVDEGLLEFVGSALQFVQSSSPNYVLLASLDGARWQLAAPAGEGRGALRQAQVLAKKAKQLLRSETPFPVLDLPVVGSMRGAFVGLDPLRVTVGMMGTRMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGNVDEDVERLVAAFKALAASLQEIELKEGKKGKD--MTPNVVVEFPAFDGQQAAVGTRRCGPREAYFTASEVMSTSDASIVGRASAETVCPYPPGIPVLLPGELITTEVLRFLQGVLDAGGSVTGCSDPSLGMLRVL 623
            + Q+KTP++EAL   ATRI  APF+ PGHK G G+   L   F +                +++  DLPE+PELDNLFAP+G IQEA+ LAA AF GA++TWFLVNGST G                           K++LPRNVH SAI GLIL+GA P+F++P YD   DI H I  +       AL  H    D  AVL+V PTY+GV  D+   A +  ++ +PL+VDEAHG+H AF              +     ALA GADL VQSTHK L A++Q +M+H  +G  +D   L     +LQ +QS+SP+Y+LLASLD AR Q+A     G   + +A  LA +A+  +       VL LP   S    FV LD  R+TV + G  ++GF+ADE+L +E GV AELP+ + LTF +  GN   D+ERLV  F  L     ++  K   K ++    PN V            +      PREA+F  +E +         R SAE +CPYPPGIP+L+PGE+IT+E L +LQ +  + G +TGC++PSL  L+V+
Sbjct:    6 ISQAKTPILEALWQCATRINHAPFYTPGHKRGEGITQQLVNYFGK----------------AIFSADLPELPELDNLFAPQGIIQEAQELAAVAF-GAEKTWFLVNGSTCGVEAAILATCGVG--------------DKIILPRNVHNSAIAGLILSGAVPIFIAPAYDPVLDIAHSITPEAVAA---ALAAH---PDAKAVLMVYPTYYGVCGDLNAIAAVVHQHNIPLLVDEAHGSHFAF-------------HSELPTPALAAGADLSVQSTHKVLGALTQASMLHV-SGNRIDRDRL---NKSLQLLQSTSPSYLLLASLDAARQQMAL---YGEELMTKALRLADEARNRISQIPNLSVLQLPAKNS---GFVALDETRLTVTVSGLGIAGFEADEILHQELGVTAELPSLQHLTFIISLGNTVADIERLVEGFAVLGERSTQVSQKSKVKSQNQLQIPNSVSR--RRSEALFRIPNSLLTPREAFFAPTETLPFHQTR--DRISAELICPYPPGIPILMPGEIITSEALEYLQQIQVSDGYITGCTEPSLTQLKVV 503          
BLAST of NO09G01340 vs. NCBI_GenBank
Match: WP_009783936.1 (aminotransferase class V-fold PLP-dependent enzyme [Lyngbya sp. PCC 8106] >EAW37478.1 lysine decarboxylase [Lyngbya sp. PCC 8106])

HSP 1 Score: 357.1 bits (915), Expect = 1.100e-94
Identity = 227/558 (40.68%), Postives = 313/558 (56.09%), Query Frame = 0
Query:   64 VEQSKTPLVEALALAATRIKAPFFFPGHKMGRGLPVGLSGPFARSAADADVVAKRRHVRDSVWQHDLPEIPELDNLFAPEGPIQEAEMLAAQAFGGAQRTWFLVNGSTAGXXXXXXXXXXXXXXXXXXXXXGASRISKVLLPRNVHKSAINGLILAGADPVFLSPVYDKEWDICHGIPIDGEGGLDDALKVHGPGGDIAAVLLVSPTYHGVIMDIKQAALLCARYKVPLIVDEAHGAHLAFLERDGQTAAIKPAAAAALEGALALGADLVVQSTHKTLTAVSQCAMMHAGNGPLVDEGLLEFVGSALQFVQSSSPNYVLLASLDGARWQLAAPAGEGRGALRQAQVLAKKAKQLLRSETPFPVLDLPVVGSMRGAFVGLDPLRVTVGMMGTRMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGNVDEDVERLVAAFKALAASLQEIELKEGKKGKDMTPNVVVEFPAFDGQQAAVGTRRCGPREAYFTASEVMSTSDASIVGRASAETVCPYPPGIPVLLPGELITTEVLRFLQGVLDAGGSVTGCSDPSLGMLRV 622
            ++Q+KTPL+E L   A R  A F+ PGHK G G+ + L                      SV++ DLPE+PELDNLFAPEG I+ A+ LAA AF GA++T FLVNGST G                           K+++PRNVH+S I+GL+L+GA PVFL P Y+ EWD+ + I  +    ++ ALK H    DI AVL+V PTY G+  +I+Q A +   Y +PL+VDEAHG H  F        A  P A      AL  GADLVVQSTHK L A++Q +M+H   G  +D   L     ALQ +QSSSP+Y+LLASLD AR Q+A    +G+  + Q   LA+ AK  L       VL+LP +   + +F+ LD  R++V +    ++G+ ADE+L ++ GV AELP  + LTF +  GN + D+E+LV  F  L+    + +             +  EFP      + V   R  PR+A+  AS+  S  D   +G  SAE VCPYPPGIP+L+PGE I+ + + +L  VL  G ++TGCSDP+L  L++
Sbjct:   30 LDQTKTPLLETLKTLANRPHAAFYAPGHKRGNGMNLLLQNVLG----------------SSVFKADLPELPELDNLFAPEGVIESAQQLAAAAF-GAEQTRFLVNGSTGGIIASILATCGTG--------------DKIIMPRNVHQSVISGLVLSGAIPVFLQPEYNAEWDLTYSITPE---AVETALKHH---ADIKAVLMVYPTYQGICGNIEQIAKITHDYNIPLLVDEAHGPHFYF-------HADLPIA------ALTAGADLVVQSTHKVLGAMTQASMLHL-QGNRIDRSRL---NQALQMIQSSSPSYLLLASLDAARQQMAT---QGQELMNQTLQLAETAKISLEKIPGISVLNLPKI--KQNSFIALDSTRLSVNVSDLGLTGYQADEILHQQFGVTAELPNLKHLTFIISLGNTEADIEQLVKGFTQLSEMSHDFQ------------TISPEFPLPPVFSSVV---RFSPRDAFEGASQRRSVDDC--IGCISAEMVCPYPPGIPILMPGEQISADAINYLHKVLSVGATITGCSDPTLETLKI 511          
BLAST of NO09G01340 vs. NCBI_GenBank
Match: WP_104546158.1 (aminotransferase class V-fold PLP-dependent enzyme [Chroococcidiopsis sp. TS-821] >PPS45974.1 arginine decarboxylase [Chroococcidiopsis sp. TS-821])

HSP 1 Score: 357.1 bits (915), Expect = 1.100e-94
Identity = 230/558 (41.22%), Postives = 314/558 (56.27%), Query Frame = 0
Query:   66 QSKTPLVEALALAATRIKAPFFFPGHKMGRGLPVGLSGPFARSAADADVVAKRRHVRDSVWQHDLPEIPELDNLFAPEGPIQEAEMLAAQAFGGAQRTWFLVNGSTAGXXXXXXXXXXXXXXXXXXXXXGASRISKVLLPRNVHKSAINGLILAGADPVFLSPVYDKEWDICHGIPIDGEGGLDDALKVHGPGGDIAAVLLVSPTYHGVIMDIKQAALLCARYKVPLIVDEAHGAHLAFLERDGQTAAIKPAAAAALEGALALGADLVVQSTHKTLTAVSQCAMMHAGNGPLVDEGLLEFVGSALQFVQSSSPNYVLLASLDGARWQLAAPAGEGRGALRQAQVLAKKAKQLLRSETPFPVLDLPVVGSMRGAFVGLDPLRVTVGMMGTRMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGNVDEDVERLVAAFKALAASLQEIELKEGKKGKDMTPNVVVEFPAFDGQQAAVG-TRRCGPREAYFTASEVMSTSDASIVGRASAETVCPYPPGIPVLLPGELITTEVLRFLQGVLDAGGSVTGCSDPSLGMLRVL 623
            Q   P+++AL   A    A F+ PGHK G+G+   L+                R+   ++++ DLPE+PELDNLFAP+G IQEA+ LAA AF GA++TWFLVNGST G                       +   K++LPRNVH SAI GLIL+GA PVF++P YD E DI H I ++    +  AL+ H    D  AV+++ PTY+G   DI   A L  ++ +PL+VDEAHGAH AF           P    +   ALA GADL VQSTHK L A++Q +M+H   G  +D   L     ALQ VQS+SP+Y+LLASLD AR Q+A     G+  + +   LA +A+  L       VL+          F  LDP R+TV + G  ++GF+ADE+L E+  V AELP+ + LTF +  GN  ED+E+LV+AF  ++   Q+  L   K             P ++     +G T +  PR+AYF  +E +  S AS   R  AE VCPYPPGIPVL+PGE+I  + L +LQ +L  GG ++GC+DPSL  L+V+
Sbjct:    8 QINLPILDALRECANDNHAAFYTPGHKRGQGISSSLA----------------RNFNSNIFKFDLPELPELDNLFAPQGVIQEAQELAADAF-GAEQTWFLVNGSTCGVEAAILAT--------------CNAGDKIILPRNVHSSAIAGLILSGAIPVFINPEYDSELDIAHSITLE---SVATALQQH---PDAKAVMILYPTYYGACGDIGAIASLAHKHNIPLLVDEAHGAHFAF----------HPDLPIS---ALAAGADLTVQSTHKVLGAMTQASMLHV-QGNRIDRDRL---SKALQLVQSTSPSYLLLASLDAARQQMAL---HGKSLMSRTLQLAAEARTHLHQIPGLSVLEC----QSTPGFCRLDPTRLTVTVSGLGLTGFEADEILHEQLSVTAELPSLQHLTFIISFGNAQEDIEKLVSAFNLVSQRYQKEHLTYKK-------------PMWEDFVYKMGYTVQISPRQAYFAETESVPISQAS--DRICAELVCPYPPGIPVLMPGEIINRQALDYLQQILVTGGFISGCADPSLSTLKVV 489          
BLAST of NO09G01340 vs. NCBI_GenBank
Match: WP_012595621.1 (aminotransferase class V-fold PLP-dependent enzyme [Cyanothece sp. PCC 8801] >ACK66353.1 Orn/Lys/Arg decarboxylase major region [Cyanothece sp. PCC 8801])

HSP 1 Score: 355.1 bits (910), Expect = 4.300e-94
Identity = 222/566 (39.22%), Postives = 323/566 (57.07%), Query Frame = 0
Query:   59 EERQQVEQSKTPLVEALALAATRIKAPFFFPGHKMGRGLPVGLSGPFARSAADADVVAKRRHVRDSVWQHDLPEIPELDNLFAPEGPIQEAEMLAAQAFGGAQRTWFLVNGSTAGXXXXXXXXXXXXXXXXXXXXXGASRISKVLLPRNVHKSAINGLILAGADPVFLSPVYDKEWDICHGIPIDGEGGLDDALKVHGPGGDIAAVLLVSPTYHGVIMDIKQAALLCARYKVPLIVDEAHGAHLAFLERDGQTAAIKPAAAAALEGALALGADLVVQSTHKTLTAVSQCAMMHAGNGPLVDEGLLEFVGSALQFVQSSSPNYVLLASLDGARWQLAAPAGEGRGALRQAQVLAKKAKQLLRSETPFPVLDL--PVVGSMRGAFVGLDPLRVTVGMMGTRMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGNVDEDVERLVAAFKALAASLQEIELKEGKKGKDMTPNVVVEFPAFDGQQAAVGTRRCGPREAYFTASEVMSTSDASIVGRASAETVCPYPPGIPVLLPGELITTEVLRFLQGVLDAGGSVTGCSDPSLGMLRVL 623
            E+   + Q + PL+EAL  +  +  + F+ PGHK G G+   L          A ++ K      +V+Q DLPE+P+LDNLFAP G IQ+A+ LAA+ + GA +TWFLVNGST G                           K+++PRN+H+SAI GLIL+GA P+F++P YD  WD+ + I  +    L+ AL       ++ AV++V PTYHG+  D++  A +   Y +PL+VDEAHGAH  F           P    +   AL+LGADLVVQSTHK L A++Q +M+H   G  +D    + +  ALQ  QS+SP+Y+LLASLDGAR Q+A    +G+  L Q   L++K ++ +       +L+L  P  G     F  LD  R+TV + G  ++GF+ DE+L ++ GV AELP  R L F +  GN  ED+ +L+ AFK L A+L              +P+     P        + +    PREA+F+A+++++  D+  +G  S E +CPYPPGIP+L+PGE IT + + +LQ VLD GGS+TGCSDPSL  L+++
Sbjct:    5 EDSGLLSQYRVPLIEALTNSIKQQNSAFYAPGHKRGEGIAPSL----------ATLLGK------TVFQADLPELPDLDNLFAPSGVIQKAQELAAEVY-GADQTWFLVNGSTCGIISAILATCRPG--------------DKIIVPRNIHQSAIAGLILSGAVPIFINPEYDPIWDLAYSITPE---ALERALI---ENSEVKAVMVVYPTYHGICGDLQAIAKITHGYNIPLLVDEAHGAHFTF----------HPNLPFS---ALSLGADLVVQSTHKVLGAMTQASMLHQ-QGNRIDP---QRISQALQLTQSTSPSYLLLASLDGARQQMAL---QGQDLLSQTIELSQKVREEISQIKGLQILNLEQPCPG-----FKQLDITRLTVNVSGLGLTGFEVDEILHQQLGVTAELPMLRHLAFIISIGNKTEDINQLIKAFKTLTANL--------------SPS--PRHPVTPSPPPLLSSCYISPREAFFSATKMVNIEDS--IGGISGELICPYPPGIPLLMPGEKITAQAIEYLQKVLDLGGSITGCSDPSLKQLKII 490          
BLAST of NO09G01340 vs. NCBI_GenBank
Match: WP_015784137.1 (aminotransferase class V-fold PLP-dependent enzyme [Cyanothece sp. PCC 8802] >ACV01262.1 Orn/Lys/Arg decarboxylase major region [Cyanothece sp. PCC 8802])

HSP 1 Score: 354.8 bits (909), Expect = 5.600e-94
Identity = 221/566 (39.05%), Postives = 323/566 (57.07%), Query Frame = 0
Query:   59 EERQQVEQSKTPLVEALALAATRIKAPFFFPGHKMGRGLPVGLSGPFARSAADADVVAKRRHVRDSVWQHDLPEIPELDNLFAPEGPIQEAEMLAAQAFGGAQRTWFLVNGSTAGXXXXXXXXXXXXXXXXXXXXXGASRISKVLLPRNVHKSAINGLILAGADPVFLSPVYDKEWDICHGIPIDGEGGLDDALKVHGPGGDIAAVLLVSPTYHGVIMDIKQAALLCARYKVPLIVDEAHGAHLAFLERDGQTAAIKPAAAAALEGALALGADLVVQSTHKTLTAVSQCAMMHAGNGPLVDEGLLEFVGSALQFVQSSSPNYVLLASLDGARWQLAAPAGEGRGALRQAQVLAKKAKQLLRSETPFPVLDL--PVVGSMRGAFVGLDPLRVTVGMMGTRMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGNVDEDVERLVAAFKALAASLQEIELKEGKKGKDMTPNVVVEFPAFDGQQAAVGTRRCGPREAYFTASEVMSTSDASIVGRASAETVCPYPPGIPVLLPGELITTEVLRFLQGVLDAGGSVTGCSDPSLGMLRVL 623
            E+   + Q + PL+EAL  +  +  + F+ PGHK G G+   L          A ++ K      +V+Q DLPE+P+LDNLFAP G IQ+A+ LAA+ + GA +TWFL+NGST G                           K+++PRN+H+SAI GLIL+GA P+F++P YD  WD+ + I  +    L+ AL       ++ AV++V PTYHG+  D++  A +   Y +PL+VDEAHGAH  F           P    +   AL+LGADLVVQSTHK L A++Q +M+H   G  +D    + +  ALQ  QS+SP+Y+LLASLDGAR Q+A    +G+  L Q   L++K ++ +       +L+L  P  G     F  LD  R+TV + G  ++GF+ DE+L ++ GV AELP  R L F +  GN  ED+ +L+ AFK L A+L              +P+     P        + +    PREA+F+A+++++  D+  +G  S E +CPYPPGIP+L+PGE IT + + +LQ VLD GGS+TGCSDPSL  L+++
Sbjct:    5 EDSGLLSQYRVPLIEALTNSIKQQNSAFYAPGHKRGEGIAPSL----------ATLLGK------TVFQADLPELPDLDNLFAPSGVIQKAQELAAEVY-GADQTWFLINGSTCGIISAILATCRPG--------------DKIIVPRNIHQSAIAGLILSGAVPIFINPEYDPIWDLAYSITPE---ALERALI---ENSEVKAVMVVYPTYHGICGDLQAIAKITHGYNIPLLVDEAHGAHFTF----------HPNLPFS---ALSLGADLVVQSTHKVLGAMTQASMLHQ-QGNRIDP---QRISQALQLTQSTSPSYLLLASLDGARQQMAL---QGQDLLSQTIELSQKVREEISQIKGLQILNLEQPCPG-----FKQLDITRLTVNVSGLGLTGFEVDEILHQQLGVTAELPMLRHLAFIISIGNKTEDINQLIKAFKTLTANL--------------SPS--PRHPVTPSPPPLLSSCYISPREAFFSATKMVNIEDS--IGGISGELICPYPPGIPLLMPGEKITAQAIEYLQKVLDLGGSITGCSDPSLKQLKII 490          
BLAST of NO09G01340 vs. NCBI_GenBank
Match: WP_023068718.1 (aminotransferase class V-fold PLP-dependent enzyme [Lyngbya aestuarii] >ERT05054.1 aminotransferase class-V family protein [Lyngbya aestuarii BL J])

HSP 1 Score: 354.0 bits (907), Expect = 9.600e-94
Identity = 227/558 (40.68%), Postives = 314/558 (56.27%), Query Frame = 0
Query:   64 VEQSKTPLVEALALAATRIKAPFFFPGHKMGRGLPVGLSGPFARSAADADVVAKRRHVRDSVWQHDLPEIPELDNLFAPEGPIQEAEMLAAQAFGGAQRTWFLVNGSTAGXXXXXXXXXXXXXXXXXXXXXGASRISKVLLPRNVHKSAINGLILAGADPVFLSPVYDKEWDICHGIPIDGEGGLDDALKVHGPGGDIAAVLLVSPTYHGVIMDIKQAALLCARYKVPLIVDEAHGAHLAFLERDGQTAAIKPAAAAALEGALALGADLVVQSTHKTLTAVSQCAMMHAGNGPLVDEGLLEFVGSALQFVQSSSPNYVLLASLDGARWQLAAPAGEGRGALRQAQVLAKKAKQLLRSETPFPVLDLPVVGSMRGAFVGLDPLRVTVGMMGTRMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGNVDEDVERLVAAFKALAASLQEIELKEGKKGKDMTPNVVVEFPAFDGQQAAVGTRRCGPREAYFTASEVMSTSDASIVGRASAETVCPYPPGIPVLLPGELITTEVLRFLQGVLDAGGSVTGCSDPSLGMLRV 622
            ++Q+KTPL++ L   A R  A F+ PGHK G G+ + L                       V++ DLPE+PELDNLFAPEG I EA+ LAA+AF GA++T FLVNGST G                           K+++PRNVH+S I+GLIL+GA PVFL P Y+ +WD+ + I       ++ ALK +    DI AVL+V PTY G+  +I+Q A +   Y +PL+VDEAHG H  F   D  TA            AL  GADLVVQSTHK L A++Q +M+H   G  +D   L     ALQ +QSSSP+Y+LLASLD AR Q+A    +G+  +     LA +A++LL       VL+LP   + + +F  LDP R++V +    ++G+ ADE+L ++  V AELP  + LTF +  GN   D+E+LV  F  L+A + + +             +  EFP      + V   R  PREA+  AS+  S +D   VG  SAE VCPYPPGIP+L+PGE I+ + + +L  VL  G ++TGCSDP+L  L++
Sbjct:    2 LDQTKTPLLDTLKTLANRPHAAFYAPGHKRGNGINLLLQNVLG----------------SQVFKADLPELPELDNLFAPEGVIDEAQQLAAEAF-GAEQTRFLVNGSTGGIIAAILATCGTG--------------DKIIMPRNVHQSVISGLILSGAIPVFLQPEYNADWDLTYCIT---PQAIETALKQY---SDIKAVLIVYPTYQGICGNIEQIAKITHDYNIPLLVDEAHGPHFYF-HSDLPTA------------ALTAGADLVVQSTHKVLGAMTQASMLHI-QGNRIDRNRL---NQALQMIQSSSPSYLLLASLDAARQQMAT---QGQELMNHTLKLADQARKLLDKIPGISVLNLP--ENKQDSFWDLDPTRLSVNVSNLGLTGYQADEILHQQLQVTAELPNLKHLTFIISLGNTKADIEQLVKGFTQLSAMIPDFQ------------TISPEFPLPPVFSSVV---RFSPREAFEGASQRRSVNDC--VGCISAEMVCPYPPGIPILMPGEQISADAINYLHKVLSVGATITGCSDPTLETLKI 483          
BLAST of NO09G01340 vs. NCBI_GenBank
Match: WP_026103746.1 (aminotransferase class V-fold PLP-dependent enzyme [Kamptonema formosum])

HSP 1 Score: 354.0 bits (907), Expect = 9.600e-94
Identity = 227/558 (40.68%), Postives = 313/558 (56.09%), Query Frame = 0
Query:   66 QSKTPLVEALALAATRIKAPFFFPGHKMGRGLPVGLSGPFARSAADADVVAKRRHVRDSVWQHDLPEIPELDNLFAPEGPIQEAEMLAAQAFGGAQRTWFLVNGSTAGXXXXXXXXXXXXXXXXXXXXXGASRISKVLLPRNVHKSAINGLILAGADPVFLSPVYDKEWDICHGIPIDGEGGLDDALKVHGPGGDIAAVLLVSPTYHGVIMDIKQAALLCARYKVPLIVDEAHGAHLAFLERDGQTAAIKPAAAAALEGALALGADLVVQSTHKTLTAVSQCAMMHAGNGPLVDEGLLEFVGSALQFVQSSSPNYVLLASLDGARWQLAAPAGEGRGALRQAQVLAKKAKQLLRSETPFPVLDLPVVGSMRGAFVGLDPLRVTVGMMGTRMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGNVDEDVERLVAAFKALA-ASLQEIELKEGKKGKDMTPNVVVEFPAFDGQQAAVGTRRCGPREAYFTASEVMSTSDASIVGRASAETVCPYPPGIPVLLPGELITTEVLRFLQGVLDAGGSVTGCSDPSLGMLRVL 623
            Q K PL++AL     +  APF+ PGHK+G    VG+S P +     A            V++ DLPE+PELDNLFAPEG I EA+ LAA+AF GA+ TWFL NGST G                       S+  K++LPRN+H+SAI+GLIL+GA P+F++P YD  WDI + I       L  AL+ H    D  AV++V PTYHGV  ++++ A L  +Y +PL+VDEAHGAH  F     +T             AL+ GADL VQSTHK L A++Q +M+H   G  ++   +  +  ALQ VQS+SP+Y+LLASLD AR Q+A     G   + +  +LA+ A+  L       VL+L         FV LD  R+TV +    +SGF  DE+L EE GV AELP  + LTF +  GN + D++RL+ AF  ++  +L    +K      + +P+  +                  PR+A+F  +EV+    A    R SAE +CPYPPGIP+L+PGE+IT E + +LQ VL  GG +TGCSDP+L   +V+
Sbjct:    4 QVKMPLLDALRDCTNKSNAPFYAPGHKLG----VGISKPLSDLLGIA------------VFRADLPELPELDNLFAPEGVILEAQQLAAEAF-GAEFTWFLTNGSTCGIVAAILAT--------------CSQGDKIILPRNIHQSAISGLILSGAIPIFVNPEYDANWDIANCIT---PKNLAIALEQH---PDAKAVMVVYPTYHGVCGNLEEIAQLTHQYHIPLLVDEAHGAHFNFHPDLPRT-------------ALSCGADLTVQSTHKVLGAMTQASMLHV-QGNYIN---ISRLNRALQLVQSTSPSYLLLASLDAARQQMAL---HGEELMTRTLMLAETARSRLSEIPGLSVLEL----LNTPGFVSLDSTRLTVKISDLGLSGFAVDEILNEELGVTAELPMLKHLTFIISLGNTESDIDRLIEAFMTISHRNLSRKNVKRNDNQLEKSPH--LPXXXXXXXXXXXXXXXLSPRDAFFATAEVVLVDRA--CDRISAELICPYPPGIPILIPGEIITQEAVEYLQEVLILGGCITGCSDPTLKTFKVV 496          
BLAST of NO09G01340 vs. NCBI_GenBank
Match: WP_099101986.1 (aminotransferase class V-fold PLP-dependent enzyme [Nostoc sp. 'Peltigera malacea cyanobiont' DB3992] >PHM08507.1 arginine decarboxylase [Nostoc sp. 'Peltigera malacea cyanobiont' DB3992])

HSP 1 Score: 353.2 bits (905), Expect = 1.600e-93
Identity = 231/559 (41.32%), Postives = 313/559 (55.99%), Query Frame = 0
Query:   64 VEQSKTPLVEALALAATRIKAPFFFPGHKMGRGLPVGLSGPFARSAADADVVAKRRHVRDSVWQHDLPEIPELDNLFAPEGPIQEAEMLAAQAFGGAQRTWFLVNGSTAGXXXXXXXXXXXXXXXXXXXXXGASRISKVLLPRNVHKSAINGLILAGADPVFLSPVYDKEWDICHGIPIDGEGGLDDALKVHGPGGDIAAVLLVSPTYHGVIMDIKQAALLCARYKVPLIVDEAHGAHLAFLERDGQTAAIKPAAAAALEGALALGADLVVQSTHKTLTAVSQCAMMHAGNGPLVDEGLLEFVGSALQFVQSSSPNYVLLASLDGARWQLAAPAGEGRGALRQAQVLAKKAKQLLRSETPFPVLDLPVVGSMRGAFVGLDPLRVTVGMMGTRMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGNVDEDVERLVAAFKALAASLQEIELKEGKKGKDMTPNVVVEFPAFDGQQAAVGTRRCGPREAYFTASEVMSTSDASIVGRASAETVCPYPPGIPVLLPGELITTEVLRFLQGVLDAGGSVTGCSDPSLGMLRVL 623
            + QS TPL++AL   A R  APF+ PGHK+G G+   L          AD++ K      +V++ DL E+ +LDNLFAP+G IQEA+ LAA+AFG  Q TWFLVNGST G                           K++LPRNVH SAI GLIL+GA P+FL+P YD   DI H I       ++ AL+ H    D  AVL+V PTY+GV  D+   A +  +Y VPL+VDEAHGAH AF           P        ALA GADL VQSTHK L A++Q +M+H   G  +D    + +  ALQ VQS+SP+Y+LLASLD AR Q+A     G+  + +   LA++A+  +       VL++P +    G FV LD  R+TV + G  ++GF+ADE+L E+  V AE  + + LTF +  GN   D+E+LV  F  LA        KE ++      N V      +  +      +  PREA+F  SE++  +  +   R  AE VCPYPPGIPVL+PGE+IT  VL +LQ +   GG ++GC+D SL  L+V+
Sbjct:    2 LNQSLTPLLDALKANAARPHAPFYTPGHKLGEGISQPL----------ADLLGK------AVFRADLTELADLDNLFAPQGVIQEAQQLAAEAFGALQ-TWFLVNGSTCGIEAAILATCGTG--------------DKIILPRNVHSSAIAGLILSGAIPIFLNPEYDPVLDIAHSIT---PNAVESALQQH---PDTKAVLIVYPTYYGVCGDLSAIANITHQYNVPLLVDEAHGAHFAF----------HPELPTP---ALAAGADLTVQSTHKVLGAMTQASMLHI-RGNRID---CDRISKALQLVQSTSPSYLLLASLDAARQQMAM---HGKMLMSRTLQLAEEARTRISQIPELSVLEMPQLEESPG-FVALDKTRLTVTVSGLGLTGFEADEILDEKFAVTAEFASLQHLTFIISLGNTPADIEKLVQGFTTLA--------KEYRRSNLTVKNQV----GLNLDRTLDYALQLSPREAFFAVSEILPLTQTN--KRICAEIVCPYPPGIPVLMPGEVITKSVLEYLQQIQSMGGFISGCNDISLKSLKVV 488          
BLAST of NO09G01340 vs. NCBI_GenBank
Match: WP_106256971.1 (aminotransferase class V-fold PLP-dependent enzyme [Leptolyngbya frigida] >PSB28029.1 lysine decarboxylase [Leptolyngbya frigida ULC18])

HSP 1 Score: 353.2 bits (905), Expect = 1.600e-93
Identity = 230/557 (41.29%), Postives = 311/557 (55.83%), Query Frame = 0
Query:   66 QSKTPLVEALALAATRIKAPFFFPGHKMGRGLPVGLSGPFARSAADADVVAKRRHVRDSVWQHDLPEIPELDNLFAPEGPIQEAEMLAAQAFGGAQRTWFLVNGSTAGXXXXXXXXXXXXXXXXXXXXXGASRISKVLLPRNVHKSAINGLILAGADPVFLSPVYDKEWDICHGIPIDGEGGLDDALKVHGPGGDIAAVLLVSPTYHGVIMDIKQAALLCARYKVPLIVDEAHGAHLAFLERDGQTAAIKPAAAAALEGALALGADLVVQSTHKTLTAVSQCAMMHAGNGPLVDEGLLEFVGSALQFVQSSSPNYVLLASLDGARWQLAAPAGEGRGALRQAQVLAKKAKQLLRSETPFPVLDLPVVGSMRGAFVGLDPLRVTVGMMGTRMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGNVDEDVERLVAAFKALAASLQEIELKEGKKGKDMTPNVVVEFPAFDGQQAAVGTRRCGPREAYFTASEVMSTSDASIVGRASAETVCPYPPGIPVLLPGELITTEVLRFLQGVLDAGGSVTGCSDPSLGMLRVL 623
            Q+KTPL++AL   A +  APF+ PGHK G+G P  L+                     +V++ DLPE+PELDNLFAP+G IQ A+ LAA AF GA RTWFL NGST G                           K++LPRNVH+SAI+GLIL+GA P+F+ P YD   D+ H +       + +AL  H    D  AV++V PTY+GV  D+   A +  ++ +PL+VDEAHGAH AF           P    A   ALA GADL VQSTHKTL+A++Q AM+H       D    + V  ALQ +QS+SP+Y+LLASLD AR Q+A    +G+  L Q   LA +A+  L        L     G   G F+ LD  R+TV + G  + GF AD++L E+ GV AELP+ + LTF V  GN   D+E LV AF+ LA   +E  ++  ++          ++P+     ++  T    PR A+  A+E +    A  + R SAE +CPYPPGIPVL+PGE+I+   +  LQ VL  GG ++GC+DPSL  LRV+
Sbjct:   27 QAKTPLLDALWACAHKAHAPFYAPGHKRGQGTPDRLAALLG----------------TAVFRADLPELPELDNLFAPDGVIQAAQELAAAAF-GADRTWFLTNGSTVGVIAAIVATCDPG--------------DKIILPRNVHQSAISGLILSGAVPIFIQPDYDPILDLAHSLT---PAAVAEALTQH---PDAKAVMMVYPTYYGVCGDVAAIAYIAHQHNIPLLVDEAHGAHFAF----------HPELPIA---ALAAGADLAVQSTHKTLSAMTQAAMLHTRG----DRVQGDRVSKALQLLQSTSPSYLLLASLDAARHQMAT---QGKQLLSQTLQLADEARSRLEQIPRLSTLKPEQAGQTAG-FMTLDRTRLTVTVTGLGLDGFTADQILNEQLGVTAELPSLQHLTFIVSIGNTRADLEALVQAFQTLATPQRESTMQRHRE---------KQYPSCLTPHSSPLT----PRAAFLAATETIPI--AQSINRISAELICPYPPGIPVLMPGEVISENAIASLQTVLAIGGLISGCADPSLETLRVV 510          
BLAST of NO09G01340 vs. NCBI_GenBank
Match: WP_015192159.1 (aminotransferase class V-fold PLP-dependent enzyme [Stanieria cyanosphaera] >AFZ34486.1 arginine decarboxylase [Stanieria cyanosphaera PCC 7437])

HSP 1 Score: 352.4 bits (903), Expect = 2.800e-93
Identity = 223/563 (39.61%), Postives = 320/563 (56.84%), Query Frame = 0
Query:   64 VEQSKTPLVEALALAATRIKAPFFFPGHKMGRGLPVGLSGPFARSAADADVVAKRRHVRDSVWQHDLPEIPELDNLFAPEGPIQEAEMLAAQAFGGAQRTWFLVNGSTAGXXXXXXXXXXXXXXXXXXXXXGASRISKVLLPRNVHKSAINGLILAGADPVFLSPVYDKEWDICHGIPIDGEGGLDDALKVHGPGGDIAAVLLVSPTYHGVIMDIKQAALLCARYKVPLIVDEAHGAHLAFLERDGQTAAIKPAAAAALEGALALGADLVVQSTHKTLTAVSQCAMMHAGNGPLVDEGLLEFVGSALQFVQSSSPNYVLLASLDGARWQLAAPAGEGRGALRQAQVLAKKAKQLLRSETPFPVLDL-PVVGSMRGAFVGLDPLRVTVGMMGTRMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGNVDEDVERLVAAFKALAASLQEIELKEGKKGKDMTPNVVVEF---PAFDGQQAAVGTRRCGPREAYFTASEVMSTSDASIVGRASAETVCPYPPGIPVLLPGELITTEVLRFLQGVLDAGGSVTGCSDPSLGMLRVL 623
            + QS+TPLV+ L   + +  A F+ PGHK G+G+   L+          D++       +SV++ DLPE+P+LDNLFAPEG I+EA+ LAA+ F GAQ+TWFL+NGST G                           K++LPRN+H+SAI GLIL+GA P+F++P YD + D+ + I       L   L+ H    D  AV+++ PTY GV  D+   A +  +Y +PL+VDEAHGAH AF         + P+       AL+LGADL VQSTHK L+A++Q +M+H     +        +  ALQ +QS+SPNY+LLASLD AR Q+A     G   + Q   LA  A++ L +      L+L P  G     F  LDP R+TV +    ++G++ADE+L ++ GV AELP  + LTF +  GN  ED+ +LV AFK L+                ++P+  + F   P F     ++      PREA+F  SE ++   +S  GR  AE +CPYPPGIP+L+PGE+IT+E + +LQ VL  GG ++GCSDP+L  ++V+
Sbjct:    9 LSQSQTPLVDCLKSLSQQPDAAFYAPGHKKGQGIASNLT----------DILG------NSVFKVDLPELPQLDNLFAPEGVIKEAQHLAAELF-GAQQTWFLINGSTCGIIAAILATCKTG--------------DKIILPRNIHQSAIAGLILSGAIPIFINPEYDSQQDLAYSIT---SVSLKQTLQQH---PDTKAVMVLYPTYQGVGGDLAAIAQITHQYDIPLLVDEAHGAHFAF------HPDLPPS-------ALSLGADLTVQSTHKVLSAMTQASMLHLQGNRIAPSR----ISQALQLLQSTSPNYILLASLDAARQQMAL---SGDRLMNQTLELAAIARKQLSAIPGISCLELIPSPG-----FSYLDPTRLTVNVTQLGLTGYEADEILDQQLGVTAELPLLKHLTFIISLGNTTEDINQLVNAFKTLS----------------LSPSPFIHFSPTPLF-----SLAPLSLSPREAFFATSETIAIKKSS--GRICAELICPYPPGIPILMPGEIITSEAIDYLQTVLTLGGKISGCSDPNLTTIQVI 486          
The following BLAST results are available for this feature:
BLAST of NO09G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_106546655.18.700e-9541.10aminotransferase class V-fold PLP-dependent enzyme... [more]
WP_009783936.11.100e-9440.68aminotransferase class V-fold PLP-dependent enzyme... [more]
WP_104546158.11.100e-9441.22aminotransferase class V-fold PLP-dependent enzyme... [more]
WP_012595621.14.300e-9439.22aminotransferase class V-fold PLP-dependent enzyme... [more]
WP_015784137.15.600e-9439.05aminotransferase class V-fold PLP-dependent enzyme... [more]
WP_023068718.19.600e-9440.68aminotransferase class V-fold PLP-dependent enzyme... [more]
WP_026103746.19.600e-9440.68aminotransferase class V-fold PLP-dependent enzyme... [more]
WP_099101986.11.600e-9341.32aminotransferase class V-fold PLP-dependent enzyme... [more]
WP_106256971.11.600e-9341.29aminotransferase class V-fold PLP-dependent enzyme... [more]
WP_015192159.12.800e-9339.61aminotransferase class V-fold PLP-dependent enzyme... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010623NSK010623Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01340.1NO09G01340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589051gene_4420Nannochloropsis oceanica (N. oceanica CCMP1779)gene
OKR_DCgene2907Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01340.1NO09G01340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01340 ID=NO09G01340|Name=NO09G01340|organism=Nannochloropsis oceanica|type=gene|length=1878bp
ATGCGGCTCCCTGCACTCCTTTCCTTCCTTCTTACCCTTTTAAATCCACT
ACAAACAACCTACGCCTTCGTCATCGTCCCCCGTCACCACCACCACTACC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTATTCATTCAAAGATCAA
TGTTCACGGAGATGGACAAGCCAAGAAGAACGACAGCAAGTGGAGCAGTC
AAAAACACCCCTGGTTGAGGCTCTCGCCCTAGCTGCCACGCGCATCAAAG
CTCCCTTTTTCTTCCCAGGTCATAAAATGGGACGCGGATTGCCTGTAGGG
CTTTCAGGACCCTTCGCACGAAGCGCAGCCGATGCCGATGTTGTTGCTAA
ACGTAGACATGTCAGGGATAGCGTGTGGCAGCATGACTTACCCGAGATTC
CAGAGCTCGATAATTTGTTCGCTCCCGAGGGGCCTATTCAAGAAGCGGAG
ATGTTGGCTGCGCAGGCATTTGGCGGGGCTCAGCGAACGTGGTTTCTGGT
CAATGGTAGTACCGCTGGGGTTCTGGCAGCATTGCTGGCAGTGGTACGAC
GCCATCAGCAGCAGCAGCAGCAACAACCTAATGGAGCATCACGAATTAGC
AAAGTGCTTCTTCCACGAAATGTGCACAAGTCAGCGATTAATGGTTTGAT
TCTTGCGGGAGCCGATCCAGTGTTTCTCAGTCCTGTCTATGACAAAGAAT
GGGATATTTGCCACGGCATCCCCATAGATGGTGAAGGTGGGTTGGATGAC
GCTTTAAAAGTACATGGCCCCGGTGGGGATATAGCTGCGGTACTTTTGGT
TTCGCCGACTTACCACGGTGTGATAATGGATATCAAACAAGCTGCCCTTC
TTTGTGCCAGGTACAAGGTTCCGCTTATTGTCGATGAGGCACATGGCGCC
CACTTAGCATTTCTGGAACGAGACGGGCAGACAGCAGCAATAAAACCAGC
AGCGGCTGCGGCACTGGAGGGGGCTTTGGCGCTAGGGGCGGACTTGGTGG
TGCAGAGCACGCACAAGACGCTGACGGCGGTGAGTCAGTGTGCGATGATG
CATGCAGGGAACGGTCCATTGGTTGATGAGGGATTGCTTGAGTTTGTGGG
TTCCGCTTTGCAGTTCGTCCAGAGCAGCTCGCCAAATTATGTGTTGCTGG
CTTCGTTGGACGGGGCAAGATGGCAGCTTGCGGCTCCAGCAGGGGAGGGG
AGGGGAGCTTTGCGACAGGCGCAGGTATTGGCGAAAAAGGCAAAGCAGTT
GTTGAGGAGCGAGACGCCATTTCCGGTTTTGGATCTGCCAGTAGTGGGGT
CGATGAGGGGAGCTTTTGTGGGGTTGGACCCTCTCAGAGTTACGGTTGGA
ATGATGGGGACGAGGATGAGTGGGTTTGATGCGGACGAGGTCTTGATTGA
GGAGCATGGGGTATATGCAGAGTTACCGGCATCGAGGACATTGACTTTTG
CGGTCGGCCCAGGGAACGTGGATGAGGACGTGGAGAGATTAGTTGCTGCA
TTTAAGGCTTTGGCCGCCTCTTTGCAGGAGATAGAGCTAAAGGAAGGAAA
GAAGGGCAAGGACATGACCCCAAATGTCGTCGTTGAGTTTCCCGCCTTTG
ATGGGCAGCAAGCAGCGGTGGGCACCCGGCGGTGTGGGCCCCGTGAAGCT
TATTTCACAGCATCTGAGGTAATGTCGACGAGCGATGCGTCAATTGTGGG
GCGTGCGAGTGCAGAGACTGTTTGCCCCTATCCGCCCGGGATTCCTGTCT
TGTTGCCGGGGGAATTAATCACTACGGAGGTCCTGCGATTTTTGCAGGGG
GTACTGGATGCGGGAGGGTCGGTGACGGGGTGTAGTGATCCGAGCTTGGG
GATGCTAAGGGTGCTTTGCTTGGAGTAG
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protein sequence of NO09G01340.1

>NO09G01340.1-protein ID=NO09G01340.1-protein|Name=NO09G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=626bp
MRLPALLSFLLTLLNPLQTTYAFVIVPRHHHHYQQQQQQQQQQQYSFKDQ
CSRRWTSQEERQQVEQSKTPLVEALALAATRIKAPFFFPGHKMGRGLPVG
LSGPFARSAADADVVAKRRHVRDSVWQHDLPEIPELDNLFAPEGPIQEAE
MLAAQAFGGAQRTWFLVNGSTAGVLAALLAVVRRHQQQQQQQPNGASRIS
KVLLPRNVHKSAINGLILAGADPVFLSPVYDKEWDICHGIPIDGEGGLDD
ALKVHGPGGDIAAVLLVSPTYHGVIMDIKQAALLCARYKVPLIVDEAHGA
HLAFLERDGQTAAIKPAAAAALEGALALGADLVVQSTHKTLTAVSQCAMM
HAGNGPLVDEGLLEFVGSALQFVQSSSPNYVLLASLDGARWQLAAPAGEG
RGALRQAQVLAKKAKQLLRSETPFPVLDLPVVGSMRGAFVGLDPLRVTVG
MMGTRMSGFDADEVLIEEHGVYAELPASRTLTFAVGPGNVDEDVERLVAA
FKALAASLQEIELKEGKKGKDMTPNVVVEFPAFDGQQAAVGTRRCGPREA
YFTASEVMSTSDASIVGRASAETVCPYPPGIPVLLPGELITTEVLRFLQG
VLDAGGSVTGCSDPSLGMLRVLCLE*
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Synonyms
Publications