NO09G01320, NO09G01320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01320 vs. NCBI_GenBank
Match: CCA14139.1 (Rab8 family GTPase putative [Albugo laibachii Nc14]) HSP 1 Score: 326.6 bits (836), Expect = 5.400e-86 Identity = 158/203 (77.83%), Postives = 178/203 (87.68%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKKGSDAKKCC 204 MAR ENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKN+ELDGK+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDR SF+SIRNWVGQIQQHADVHVNKILIGNKCDM +V++TEEGQ+LA+++G++F+ETSAKN++NVE F+ IAREVKNR++ +GG + AK K CC Sbjct: 18 MARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMMDDKVISTEEGQALADEYGVRFYETSAKNNINVEGGFIDIAREVKNRLMEEGGSHKK-ESINLSAKAIPPKKGCC 219
BLAST of NO09G01320 vs. NCBI_GenBank
Match: GAX26383.1 (Ras-related protein Rab-8A [Fistulifera solaris]) HSP 1 Score: 320.1 bits (819), Expect = 5.000e-84 Identity = 155/206 (75.24%), Postives = 176/206 (85.44%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKKGSDAK---KCC 204 MA P+DMQ+KLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKN+E+D RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNW+ QIQQHADVHVNKIL+GNKCDMT +VV+TEEGQ LA +FGI F+E SAKND++V+ SF+ IAR VK+R++ DGGP + V+ K G++A KCC Sbjct: 1 MASASAPYDMQVKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVEIDNTRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMTDDKVVSTEEGQKLAAEFGIPFWECSAKNDIHVDDSFIGIARAVKDRLVADGGPAMNKKQQAVNLKAGANASAQGKCC 206
BLAST of NO09G01320 vs. NCBI_GenBank
Match: XP_002288408.1 (rab-type small G protein, partial [Thalassiosira pseudonana CCMP1335] >XP_002288891.1 rab-type small GTPase, partial [Thalassiosira pseudonana CCMP1335] >EED93844.1 rab-type small G protein, partial [Thalassiosira pseudonana CCMP1335] >EED94327.1 rab-type small GTPase, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 318.2 bits (814), Expect = 1.900e-83 Identity = 151/178 (84.83%), Postives = 166/178 (93.26%), Query Frame = 0 Query: 4 QENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGG 182 Q P+DMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKN+E+DGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNW+ QIQQHADVHVNKIL+GNKCDM ++VV+TEEGQ LA +FG+ FFE SAKND+NVE+SF+ IAR VK+RM+ DGG Sbjct: 3 QAAPYDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVEVDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGQKLAKEFGVDFFECSAKNDINVEQSFLGIARSVKDRMVKDGG 180
BLAST of NO09G01320 vs. NCBI_GenBank
Match: GAX24922.1 (Ras-related protein Rab-8A [Fistulifera solaris]) HSP 1 Score: 317.4 bits (812), Expect = 3.300e-83 Identity = 153/201 (76.12%), Postives = 174/201 (86.57%), Query Frame = 0 Query: 7 PFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKKGSDAK----KCC 204 P+DMQ+KLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKN+E+D RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNW+ QIQQHADVHVNKIL+GNKCDMT +VV+TEEGQ LA +FGI F+E SAKND++V+ SF+ IAR VK+R++ DGGP + V+ K G++A KCC Sbjct: 8 PYDMQVKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVEIDNTRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMTDDKVVSTEEGQKLAAEFGIPFWECSAKNDIHVDDSFIGIARAVKDRLVADGGPAMNKKQQAVNLKAGANANGAQGKCC 208
BLAST of NO09G01320 vs. NCBI_GenBank
Match: XP_002183915.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44584.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 317.0 bits (811), Expect = 4.300e-83 Identity = 154/204 (75.49%), Postives = 174/204 (85.29%), Query Frame = 0 Query: 2 ARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVD--GGPRATGGKAIVDAKKGSDAKKCC 204 A P+DMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKN++++G RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNW+ QIQQHADVHVNKIL+GNKCDM ++VV+TEEGQ LA++FGI FFE SAKND++VE SF+ IA+ VK+R+ D GGP A G + + G KKCC Sbjct: 4 ASNSAPYDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDVEGTRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGQKLASEFGIPFFECSAKNDIHVESSFMHIAKAVKDRLKADGQGGPSAKTGLNLKPNQSGGKDKKCC 207
BLAST of NO09G01320 vs. NCBI_GenBank
Match: CBJ32986.1 (Rab8A, RAB family GTPase [Ectocarpus siliculosus]) HSP 1 Score: 315.1 bits (806), Expect = 1.600e-82 Identity = 157/206 (76.21%), Postives = 174/206 (84.47%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDG---GPRATGGKAIVDAKKGSDAKKCC 204 M+R E+PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV QIQQHADV VNKILIGNKCDM R V+ EEG LA ++GIQFFETSAKND+NVEK F+TIAREVK+R++ DG G RA G ++A+ CC Sbjct: 1 MSRNESPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRA-AGNVNLNAQASKKKTGCC 205
BLAST of NO09G01320 vs. NCBI_GenBank
Match: OWZ11224.1 (Rab8 family GTPase [Phytophthora megakarya]) HSP 1 Score: 315.1 bits (806), Expect = 1.600e-82 Identity = 152/194 (78.35%), Postives = 172/194 (88.66%), Query Frame = 0 Query: 10 MQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKKGSDAKKCC 204 MQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKN+ELD K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDR SF+SIRNWVGQIQQHADVHVNKILIGNKCDMT +VV+TEEGQ+LA+++G++FFETSAKN++NVE F+ IAREVKNR++ +GGP ++AK K CC Sbjct: 1 MQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIAREVKNRLMEEGGPHKK-DNVNLNAKPAPVKKGCC 193
BLAST of NO09G01320 vs. NCBI_GenBank
Match: AAR13228.1 (Rab family GTPase Rab8 [Fucus distichus]) HSP 1 Score: 313.9 bits (803), Expect = 3.600e-82 Identity = 155/205 (75.61%), Postives = 173/205 (84.39%), Query Frame = 0 Query: 1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKKGSDAKK--CC 204 M+R ++PFDMQIKLLMIGD+GVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV QIQQHADV VNKILIGNKCDM R V+ EEG +LA ++GIQFFETSAKND+NVEK F+TIAREVK+R++ DG G VD + KK CC Sbjct: 1 MSRNDSPFDMQIKLLMIGDTGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSKEEGANLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPGGGGGHGRTVDINGQASKKKTGCC 205
BLAST of NO09G01320 vs. NCBI_GenBank
Match: EJK59155.1 (hypothetical protein THAOC_20656 [Thalassiosira oceanica]) HSP 1 Score: 313.5 bits (802), Expect = 4.700e-82 Identity = 150/199 (75.38%), Postives = 171/199 (85.93%), Query Frame = 0 Query: 8 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKK---GSDAKKCC 204 +DMQ+KLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKN+E+DGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNW+ QIQQHADVHVNKIL+GNKCDM ++VV+TEEGQ LA +FG+ F+E SAKND+NVE +F+TIAR VK+R++ DGG K + + + K CC Sbjct: 8 YDMQVKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVEVDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGQKLAKEFGVDFYECSAKNDINVEPTFLTIARAVKDRLMKDGGGAGPAKKGVQLGRNDPAAGNRKGCC 206
BLAST of NO09G01320 vs. NCBI_GenBank
Match: EJK65905.1 (hypothetical protein THAOC_13196 [Thalassiosira oceanica]) HSP 1 Score: 313.2 bits (801), Expect = 6.100e-82 Identity = 149/202 (73.76%), Postives = 173/202 (85.64%), Query Frame = 0 Query: 5 ENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVTTEEGQSLANDFGIQFFETSAKNDVNVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKK---GSDAKKCC 204 ++ +DMQ+KLLMIGDSGVGKTCLLLRYAN+SFSPTFITTIGIDFKIKN+E+DGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNW+ QIQQHADVHVNKIL+GNKCDM ++VV+TEEGQ LA +FG+ F+E SAKND+NVE +F+TIAR VK+R++ DGG K + + + K CC Sbjct: 4 QSAYDMQVKLLMIGDSGVGKTCLLLRYANESFSPTFITTIGIDFKIKNVEVDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMLDEKVVSTEEGQKLAKEFGVDFYECSAKNDINVEPTFLTIARAVKDRLMKDGGGAGPAKKGVQLGRNDPAAGNRKGCC 205 The following BLAST results are available for this feature:
BLAST of NO09G01320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01320 ID=NO09G01320|Name=NO09G01320|organism=Nannochloropsis oceanica|type=gene|length=833bpback to top protein sequence of NO09G01320.1 >NO09G01320.1-protein ID=NO09G01320.1-protein|Name=NO09G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=204bpback to top Synonyms
Publications
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