NO09G00820, NO09G00820 (gene) Nannochloropsis oceanica

Overview
NameNO09G00820
Unique NameNO09G00820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2481
Alignment locationchr9:287345..289825 +

Link to JBrowse

Properties
Property NameValue
DescriptionDna-damage-inducible protein f
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:287345..289825 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015297antiporter activity
GO:0015238drug transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006855drug transmembrane transport
GO:0042221response to chemical
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR002528MATE
Homology
BLAST of NO09G00820 vs. NCBI_GenBank
Match: EWM27720.1 (dna-damage-inducible protein f [Nannochloropsis gaditana])

HSP 1 Score: 1119.4 bits (2894), Expect = 0.000e+0
Identity = 608/777 (78.25%), Postives = 660/777 (84.94%), Query Frame = 0
Query:   53 PLFSADENVSSTSVVG---ERPRARGSSGTLRLKELLQRRLLFVVETVGGIDRAALFLTRCDLVGDGVELFPAVAFPSSEENWMLTQVAAVQPKKRTGRNGNSSTPLTFFLPSGELAVRISHGSQLVAVXXXXXXXXXXXXXXXXDGSPSREAELKLSAARMGRIEEVASRVFGTVLKDALVSDQQALAAESVSSSGLIRTEVLPFIGTMPGEAARPPPGSPEAIAAAYQSELARIETXXXXXXXXXXXXXXXXXXXXXILSSDVTISVGGATNITFDLHLLEDFKHIFDDIQLSGISLENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEDEAARELVGRLLFFAGMLGLALIPILQTLSYPLLNLLGARPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTSTPLIIAAIAFVVDYSVNPELVYPADPKGLGAAGAATVISEWLSAGLFLTKFLTMKPPILLVFDLFPPWAEMAPVVQASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSQLLIKWGVALGGVLAVFYATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVLTMGLSALFAGSLFFLLRDEGLTAVWETLLAFQIMRAILFAYRFIEPQGPLSIVQEPGVAKGVLAGSMFRVWGHDKNVPKXXXXXXXXXWFNDL 827
            P+FS +E  +  + +G   +RPRA+GSSG LRLK+LLQRRLLFVVET+GGIDRAAL+LTR DL GDG+ELFPA  FP++E++WM+  V A+QPKK+  RNGN +TP TFFL SGELAVRI +G+QL+AV                 G    E  L+ SA RM RIEEVA+RVF   LKD LV DQ+ALA  S SSS  +RTEVLPFIGT+P  +     G P   A A  S  +  E                      +LSSDVT+SVGGATNITFDLHLLEDFKHIFDDIQLSG+ LENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGE+EAARELVGRLLFFAGM GLALIPILQ LSYPL+NLLGA PENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDT+TPLI+AAIAF+VDYSV+PE+VYPADPKGLGAAGAATVI+EWLSAGLFLTKF++MKPPIL V DLFPPWAEMAPVV+ASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELS LL+KWGVALGGVLAVF ATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQV+TMGLSALFAGSLFFLLRDEGLTAVWETLLAFQ+MRA+LFAYRF+EP GPLSIV E    K +LAGS+FR W HDK+VPKXXXXXXXX WFND+
Sbjct:   82 PVFSFNEKSTPGTTLGTESDRPRAQGSSGVLRLKKLLQRRLLFVVETLGGIDRAALYLTRRDLAGDGLELFPAAVFPAAEDDWMIGHVGAIQPKKKLYRNGNGATPPTFFLASGELAVRICYGAQLIAV-LVVDDEEHRKTRMKPTGDARGETGLQRSAVRMHRIEEVATRVFAAALKDTLVIDQRALALNS-SSSTFVRTEVLPFIGTVPDASEGLLSGKP---ADASSSNGSEAEQADEAAAEAGAWAVNAEASTSSLLSSDVTVSVGGATNITFDLHLLEDFKHIFDDIQLSGLRLENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEEEAARELVGRLLFFAGMFGLALIPILQALSYPLINLLGAVPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTTTPLIVAAIAFIVDYSVDPEVVYPADPKGLGAAGAATVIAEWLSAGLFLTKFVSMKPPILPVLDLFPPWAEMAPVVKASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSLLLLKWGVALGGVLAVFCATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVVTMGLSALFAGSLFFLLRDEGLTAVWETLLAFQVMRAVLFAYRFVEPMGPLSIVSESKTQK-ILAGSLFRGWDHDKHVPKXXXXXXXXPWFNDM 852          
BLAST of NO09G00820 vs. NCBI_GenBank
Match: WP_013179423.1 (MATE family efflux transporter [Truepera radiovictrix] >ADI16064.1 MATE efflux family protein [Truepera radiovictrix DSM 17093])

HSP 1 Score: 244.6 bits (623), Expect = 1.100e-60
Identity = 162/426 (38.03%), Postives = 239/426 (56.10%), Query Frame = 0
Query:  356 ILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEDEAARELVGRLLFFAGMLGLALIPILQTLSYPLLNLLGARPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTSTPLIIAAIAFVVDYSVNPELVYPADPKGLGAAGA--ATVISEWLSAGLFLTKFLTMKPPILLVFDLFPPWAEMAPVVQASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSQLLIKWGVALGGVLAVFYATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVLTMGLSALFAGSLFFLL---RDEGLTAVWETLLAFQIMRAILFAYRF 777
            IL +A P +  LA +PL+SLVDT ++G  LGSV L+A G++  +F  +  + NFLA  TTP+VA    +G+ EAA   V + L  A + G   +  LQ  + PLL L+GA  E    A+ Y +VR+   PAL+L+   NGA RGY DT TP ++     +V+ +++P  ++     G G AGA  ATV+++W  A L     L  +   L +    P +AE+ P V+   ++ +RT  L + L  +   A R+G L++AAHQVA QLW+  + + +A ++AAQ LVA   G G  LR R ++  L+ WG  +G VLA  +A    L   VLPR FT+D  ++  V  +   +A+MQP+N LV V  GVL G +DF Y  L M +SA   G+L  LL      GLT VW  +     +R +  ++R+
Sbjct:   14 ILALALPALGTLAADPLVSLVDTAFVGR-LGSVPLAALGVNTALFSLAFVVFNFLAYGTTPMVARSLGRGDREAAGRAVVQALTLALLAGGLAVAFLQLFAAPLLRLMGAGEELVGPALGYLRVRALAGPALLLITAGNGAFRGYQDTRTPFLLTLGLNLVNVALDPLFIFGF---GWGLAGAAWATVVAQWAGA-LGFVWVLFARRRALGISVALPRFAELRPFVRVGWELLVRTAALLSTLTLATAVATRVGVLEVAAHQVAAQLWLFLALVVDALAVAAQALVARYRGAGQPLRARAVADRLLAWGFGVGLVLAAGFA----LFAPVLPRLFTDDPAVVRAVLTVFPFVALMQPLNALVFVWDGVLMGLEDFRYLALAMLVSAA-CGALVLLLVLPLGWGLTGVWWGVATLMGVRLVTLSWRY 429          
BLAST of NO09G00820 vs. NCBI_GenBank
Match: XP_002184243.1 (multi antimicrobial extrusion family protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44421.1 multi antimicrobial extrusion family protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 242.7 bits (618), Expect = 4.100e-60
Identity = 162/462 (35.06%), Postives = 247/462 (53.46%), Query Frame = 0
Query:  351 NTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGSV-SLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEDEAARELVGRLLFFAGMLGLALIPILQTLSYPLLNLLG---ARPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTSTPLIIAAIAFVVDYSVNPELVYPADPKGLGAAGAATVISEWLSAGLFLTKFLTMKPPI--------LLVFDLFPPWAEMAPVVQASAQIFIRTVLLQALLATSCIAAARIG-------PLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSQLLIKWGVALGGVLAVFYATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVLTMGLSALFAGSLFFLL-----RDEGLTAVWETLLAFQIMRAILFAYRFIEPQGPLSIVQE 789
            +T   IL +A P  AAL ++PL++L DT ++GHF  +   L+  G +  +  FS Y+ NFL T+TTP+VA  RA G+ + A  L G+ L  A  LG  L   L T   PLL L+G     P   A A+ +  VR+   PA++ +  S G LRGYLDT TP+ I  +A +V+  ++  L+  A    +GAA  AT  +EW+SAGLFL       P          +L     P W ++ P++ AS+  F R+++LQ  ++ +   AAR G          +AAHQ+ +QLW+  SF  ++ + A+QGLVADALGR DR    ++++ +  + + LG  LA      +      L   FT+D    + +  I+ LI + QP+N LV    G+LQGA +F +Q   M LS L A S F +L       + L  +W  L+A Q MR +   Y+ ++  GP++++ +
Sbjct:   33 STGAQILDLAIPAGAALLIDPLMTLADTAFVGHFSDTADQLAGMGSAAALLTFSFYLFNFLCTATTPLVAAKRASGQQDEAIALGGQALSLALSLGGLLTVGLWTFRQPLLTLMGTGSTGPAANAYAMAFLSVRALAAPAVLSIEASVGVLRGYLDTKTPIAILIVANIVNLFLDVALIAFAGMGPMGAA-IATTTAEWISAGLFLGVLAGRLPAAAGQLSGVSILPARSIPSWIDIQPLIVASSSAFFRSLVLQLSISAAAAMAARGGADMDTGAAASVAAHQIGIQLWLLCSFFCDSLAAASQGLVADALGRADRGDVLDVTKTVFAYSLGLGIFLATLLQVGE--STSWLFDLFTQDPSTREALSEILPLIVLAQPLNALVFAADGILQGANEFPFQAKAMALSGLSAVSTFVVLDMAAPNVDTLVHIWTALIALQAMRGMTSLYKLVDRSGPINLLAD 491          
BLAST of NO09G00820 vs. NCBI_GenBank
Match: XP_002292516.1 (mate efflux protein, multi antimicrobial extrusion family [Thalassiosira pseudonana CCMP1335] >EED90491.1 mate efflux protein, multi antimicrobial extrusion family [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 241.1 bits (614), Expect = 1.200e-59
Identity = 167/488 (34.22%), Postives = 261/488 (53.48%), Query Frame = 0
Query:  344 SGISLENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFL---GSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEDEAARELVGRLLFFAGMLGLALIPILQTLSYPLLNLLG---ARPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTSTPLIIAAIAFVVDYSVNPELVYPADPKGLGAAGAATVISEWLSAGLFLTKFLTMKP-----------------PILLVFDLFPPWAEMAPVVQASAQIFIRTVLLQALLATSCIAAARI----------GPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSQLLIKWGVALGGVLA--VFYATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVLTMGLSALFAGSLFFLLR-----------DEGLTAVWETLLAFQIMRAILFAYRFIEPQGPLSI 786
            S  SL  NT+  IL +A P + +LA++PL+++ DT ++G +        L+  G +  + VFS Y+ NFLAT+T P+VAN RA  +++ ARE+ G+ L  A  LG  L  +L     PLL ++G      E+YAE  ++  VR+   PA+++ + SNG LRGYLDT TP ++   + VV+  ++  LV       +G AG AT ++EW++A  FL       P                 P+L +    P W ++ P+V AS+ +F+R+++LQ  ++++   AAR               +AAHQ+ALQLW+  SFL +A + A+Q LVAD +GRGD    R +SQ + +WG+ LG  L+  ++  T+       L  FFT D+G   ++  ++ ++   QP+N  V    GVLQGA++FTYQ  +M +S   A   F  +            ++ L  VW  L+A Q MRA+    +  E  GP+ I
Sbjct:   31 SDASLSPNTSQQILNLAVPALISLAIDPLMTIADTAFVGRYSPPNDPYPLAGLGSAAALLVFSFYVFNFLATATAPLVANRRAALDEKGAREVGGQALSLALALGSILAVVLLIFRAPLLEVMGTGVTGAESYAE--QFLVVRALAAPAVLICSASNGVLRGYLDTKTPTLVLLGSNVVNLMLDVVLVANMKMGPMG-AGIATTVAEWIAALCFLGVLGGKLPSADGDLGSNSRDDATIFPVLTL----PKWQDVRPLVVASSSVFLRSIVLQIAMSSAAAMAARTTVESGLTEAGASSSVAAHQIALQLWLLCSFLCDALATASQALVADGIGRGDPKAVRGVSQTVFQWGLVLGLTLSACLWIGTSS----GFLIDFFTSDEGTRIELGKLLTIVICAQPLNSFVFAADGVLQGAEEFTYQAKSMVVSVATAIGAFAAIEYTPFVAMLVGDNDTLVNVWFGLIALQSMRALTSFVKLAEEDGPIDI 507          
BLAST of NO09G00820 vs. NCBI_GenBank
Match: EJK51342.1 (hypothetical protein THAOC_29490 [Thalassiosira oceanica])

HSP 1 Score: 240.0 bits (611), Expect = 2.700e-59
Identity = 176/507 (34.71%), Postives = 271/507 (53.45%), Query Frame = 0
Query:  324 ITFDLHLLEDFKH-IFDDIQLSGISLENNTNLF---ILQVAAPVVAALALEPLISLVDTYYIGHFLGSVS---LSAYGISERVFVFSLYILNFLAT-STTPIVANLRAQGEDEAARELVGRLLFFAGMLGLALIPILQTLSYPLLNLLG---ARPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTSTPLIIAAIAFVVDYSVNPELVYPADPKGLGAAGAATVISEWLSAGLFL-----------TKFLTMKPPILLVFDLFPPWAEMAPVVQASAQIFIRTVLLQALLATSCIAAAR-------IGP-LDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSQLLIKWGVALGGVLA--VFYATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVLTMGLSALFAGSLFFLLR-------------DEGLTAVWETLLAFQIMRAILFAYRFIEPQGPLSI 786
            IT  L +  D +H  +D I  +G S  +   L    IL +A P + ALA++PL+++ DT ++G +        L+  G +  + VFS Y+ NFLAT +T+P+VAN RA G++  A ++ G+    A +LG+ L  +L     PLL+L+G     P+  + A ++  VR+   PA++L + SNG +RGYLDT TP II   + VV+  ++  LV       +G AG AT ++EWL+A  FL                 K  I  V +L P W ++ P+  AS+ + +R++ LQ  ++++   AAR        GP   +AAHQVALQLW+  SFL +A + A+Q LVAD LGR DR   R++SQ +  W +ALG  L+  ++  TA       L  FFT D+G   ++  ++ ++ + QP+N  V    GVLQGA++FTYQ   M LS   A  LF  L+              + L  VW  L+  Q MR +    + ++  GP+++
Sbjct:   16 ITTRLSMNGDEEHGGYDSIVPNGSSEGDGGGLISQKILNLALPALVALAIDPLMTIADTAFVGRYSAPNDPDPLAGLGSAAALLVFSFYVFNFLATAATSPLVANRRASGDEAGAIQVGGQAQSLAVVLGITLCLVLLIYREPLLHLMGTGVTGPQADSYAQQFLVVRALAAPAVLLCSASNGIMRGYLDTKTPTIILLCSNVVNLLLDVVLVANLGMGPMG-AGIATTVAEWLAALSFLGVISGRIPRAGADLQGEKMSITPVLEL-PKWVDIKPLFVASSAVLLRSLSLQLAMSSAAAMAARSSGVMESTGPSASVAAHQVALQLWLLCSFLCDALATASQALVADGLGRDDRRAVRDISQTVFNWSLALGLALSGILWIGTAS----GFLTDFFTSDEGTRIELGKLLTIVILAQPLNSFVFAADGVLQGAEEFTYQAKAMALSVASAFGLFVFLQYTTFAQDIILGGESDALLNVWYGLIMLQFMRGLTSLIKIVDRDGPIAL 516          
BLAST of NO09G00820 vs. NCBI_GenBank
Match: WP_105012247.1 (MATE family efflux transporter [Salinibacter sp. 10B] >PQJ34847.1 MATE family efflux transporter [Salinibacter sp. 10B])

HSP 1 Score: 240.0 bits (611), Expect = 2.700e-59
Identity = 156/408 (38.24%), Postives = 238/408 (58.33%), Query Frame = 0
Query:  356 ILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGED---EAARELVGRLLFFAGMLGLALIPILQTLSYPLLNLLGARPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTSTPLIIAAIAFVVDYSVNPELVYPADPKGLGAAGAATVISEWLSAGLFLTKFLTMKPPILLVFDLFPPWAEMAPVVQASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSQLLIKWGVALGGVLAVFYATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVLTMGLSALFAGSLFFLL--RDEGLTAVW 759
            IL +A P +A LA +PL+SL+DT ++G  LGSV+L A G++  +F  +  + NFLA  TTP V   RA G D   EA R +V R L  AG+ G+  +  LQ L+ P+L L+GA  +  A A+ Y ++R+   PA++L+  S+GA RGY DT TP+++     +V+ S++P L++  D  G+  A AAT I++WL A +FL   L  +   L V  ++P    + P ++    + +RT  L   +  +   AAR+G   +AAHQVA QLW+  + + +A ++AAQ LV+  LG  D    R +S  L +WG A+G VL + +    +L+P VLP FFT+D   +  +  +   +A++QP+NGLV VG G+  GA+ F Y    M  +AL A ++  L+     GLT VW
Sbjct:   13 ILTLAVPALAGLAADPLVSLIDTAFVGQ-LGSVALGALGVNTSIFSMTFVVFNFLAYGTTPRVG--RAVGNDNRAEAGRAVV-RALVLAGLCGILALIALQLLARPILVLMGASNDLMAPALNYLRIRALAGPAVLLITASHGAFRGYQDTRTPMLVTIGFNIVNASLDPILIFVLD-WGVAGAAAATAIAQWLGALVFLGLLLGTRRDELGVELMWPSLRSLVPFLKVGRDLLLRTGSLVGSMTLATAVAARVGVTAVAAHQVAHQLWLFLALVVDALAVAAQALVSKHLGANDPETARAVSDRLFQWGFAVGVVLGLAFF---LLRP-VLPHFFTDDPDTVAALLDVYLFVALLQPLNGLVFVGDGIYMGAEAFPYLAKAMIGTALVAAAVLGLVLPMGWGLTGVW 411          
BLAST of NO09G00820 vs. NCBI_GenBank
Match: GAX26011.1 (hypothetical protein FisN_4Hh494 [Fistulifera solaris])

HSP 1 Score: 239.2 bits (609), Expect = 4.600e-59
Identity = 166/470 (35.32%), Postives = 251/470 (53.40%), Query Frame = 0
Query:  339 DDIQLSGISLENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGS-VSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEDEAARELVGRLLFFAGMLGLALIPILQTLSYPLLNLLGARPEN---YAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTSTPLIIAAIAFVVDYSVNPELVYPADPKGLGAAGA--ATVISEWLSAGLFLTKFLTMKPPILLVFDL--------FPPWAEMAPVVQASAQIFIRTVLLQALLATSCIAAARI----GPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSQLLIKWGVALGGVLAVFYATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVLTMGLSALFAGSLFFLLRDEG-----LTAVWETLLAFQIMRAILFAYRFIEPQGPLSI 786
            +D + S  + + +T   IL +A P  AAL ++PL++L DT ++G F  S V L+  G +  +  FS Y+ NFL T+TTP+VA+ RA G+ + A  +  + L  + +LG  L   L +L   LL ++G           A+ +  VR+   PA++ +  S G LRGYLDT TP++I  +A +++ +++  L+  A   GLG  GA  AT  +EW+SAGLFL       P      D          P W E+ P++ ASA +F R V+LQ  L+ +   AAR       + +AAHQ+ +QLWI  SF  ++ + A+QGLVADALGR D    RE+S+ +  + + LG  L +     +     +L   FT+D  I   +H I+ LI I QP+N +V    GV+QGA +FT+Q   M LS L A S F  L         L  VW  L+A Q MR +   ++  +  G +++
Sbjct:   21 EDTEESLETRQQSTGRKILDLAIPAGAALLIDPLMTLADTAFVGRFADSPVELAGMGSAVPILTFSFYLFNFLCTATTPLVASSRAAGQAKEAAAVGAQALTLSLVLGATLTITLLSLKQTLLTVMGTDITGEIANGYALAFLSVRALAAPAVLCIEASTGVLRGYLDTRTPIVILIVANLLNLALDIVLIAFA---GLGPMGAAIATTTAEWVSAGLFLGVLSGTIPSASSSVDAIEIRPSLSIPTWQEVRPLIVASASVFFRAVVLQVSLSGAAAMAARSVSEEAAVAVAAHQIGIQLWILCSFFCDSLAAASQGLVADALGRKDPDGVREVSRTVFAYSLCLGLFLGLLLQVGE--ATGLLFEIFTDDDSIQAALHKILPLIVIAQPLNAMVFAADGVIQGASEFTFQAKAMALSGLTAVSTFVWLEMGNADVATLVHVWTALIALQSMRGLTSLWKLAQKDGTINL 485          
BLAST of NO09G00820 vs. NCBI_GenBank
Match: GAX24369.1 (hypothetical protein FisN_4Lh494 [Fistulifera solaris])

HSP 1 Score: 237.3 bits (604), Expect = 1.700e-58
Identity = 167/475 (35.16%), Postives = 256/475 (53.89%), Query Frame = 0
Query:  339 DDIQLSGISLENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGS-VSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEDEAARELVGRLLFFAGMLGLALIPILQTLSYPLLNLLGARPENYAE---AVEYFQVRSWGTPALMLVAVSNGALRGYLDTSTPLIIAAIAFVVDYSVNPELVYPADPKGLGAAGA--ATVISEWLSAGLFL-------------TKFLTMKPPILLVFDLFPPWAEMAPVVQASAQIFIRTVLLQALLATSCIAAARI----GPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSQLLIKWGVALGGVLAVFYATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVLTMGLSALFAGSLFFLLRDEG-----LTAVWETLLAFQIMRAILFAYRFIEPQGPLSI 786
            +D + S  + + +T   IL +A P  AAL ++PL++L DT ++G F  S V L+  G +  +  FS Y+ NFL T+TTP+VA+ RA G+ + A  +  + L  + +LG  L   L +L   LL ++G           A+ +  VR+   PA++ +  S G LRGYLDT TP++I  +A +++ +++  L+  A   GLG  GA  AT  +EW+SA LFL              + + ++P + +     P W E+ P++ ASA +F R V+LQ  L+ +   AAR       + +AAHQ+ +QLWI  SF  ++ + A+QGLVADALGR D    RE+S+ +  + + LG  L +     +     +L   FT+D  I   +H I+ LI I QP+N +V    GVLQGA +FT+Q   M LS L A S F  L         L  VW  L+A Q MR +   ++  +  GP++I
Sbjct:   21 EDTEQSLEANQQSTGRKILDLAIPAGAALLIDPLMTLADTAFVGRFADSPVELAGMGSAVPILTFSFYLFNFLCTATTPLVASRRAAGKPKDAAAVGAQALTLSLVLGATLTITLLSLKQTLLIVMGTGITGELANKYALAFLSVRALAAPAVLCIEASTGVLRGYLDTRTPIVILIVANLLNLALDIVLIAFA---GLGPMGAAIATTTAEWVSALLFLGVLSGTIPSASSSVEAVEIRPSLSI-----PTWQEVRPLIVASASVFFRAVVLQVSLSGAAAMAARSVSDEAAVAVAAHQIGIQLWILCSFFCDSLAAASQGLVADALGRKDPDGVREVSKTVFAYSLCLGLFLGLLLQAGE--ATGLLFEIFTDDNSIQGALHKILPLIVIAQPLNAMVFAADGVLQGASEFTFQAKAMALSGLTALSTFAWLEMGNADVATLVHVWTALIALQSMRGLTSLWKVAQKDGPINI 485          
BLAST of NO09G00820 vs. NCBI_GenBank
Match: OEU21900.1 (MATE efflux family protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 236.9 bits (603), Expect = 2.300e-58
Identity = 169/526 (32.13%), Postives = 263/526 (50.00%), Query Frame = 0
Query:  331 LEDFKHIFDDIQLSGISLENNTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGS-VSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEDEAARELVGRLLFFAGMLGLALIPILQTLSYPLLNLLGARPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTSTPLIIAAIAFVVDYSVNPELVYPADPKGLGAAGA--ATVISEWLSAGLFLTKFLTMKPPI-------LLVFDL----------------------------------------FPPWAEMAPVVQASAQIFIRTVLLQALLATSCIAAAR------IGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSQLLIKW----GVALGGVLAV-FYATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVLTMGLSALFAGSLFFLLRDEG------LTAVWETLLAFQIMRAILFAYRFIEPQGPLSIVQEP 790
            +E F   F  I L+  +   +T   IL +A P + AL ++PL+++ DT ++G +  S   L+  G +  + +FS YI NFL T+TTP+VA+ RA  ++  A  + G+ L  A  LG  L   L     PLL+L+GA       A+++  +R+   PA+ +++ S G LRGYLDT TP+ +  +A +V++ ++  L+      GLG  GA  AT  +EW+SA LFL       P            FD+                                         PPW E+ P++ AS+ +FIR++++Q LL ++   A R       G   I+AHQ+A+QLW+  S++++A + A+QGLVADA+GR D +   ++S+ +  +    G+ L G+L V FY+T        L  FFT D G  + +  I  LI   QP+N LV    GVLQGA +F YQ  +M +S       F+ L+  G      L  +W  L+  Q+MR I  A +  +  GP+ +   P
Sbjct:    1 MECFTKAFSSISLTTTTRTTSTGRKILNLAIPALGALLIDPLLTIADTAFVGRYSESPYELAGMGSASALLIFSFYIFNFLCTATTPLVASKRATKDESGAMAVGGQALSLAFGLGAILTISLILFRQPLLDLMGATTMTNDYAMDFLMIRALSAPAVFIISASTGILRGYLDTKTPIYVLFLANIVNFGLDVVLI---TVLGLGPKGAAIATTTAEWISAVLFLFVLAGKIPSADGELGKKKEDFDISNNLVTNGQSDXXXXXXXXXXXXXXXXXXXXXXXITPKLSIPPWNEIKPLIVASSSVFIRSLVIQLLLTSAAAFATRGDGDSDNGTAFISAHQIAIQLWMLCSYISDALAAASQGLVADAIGRKDTIDVHDISKTVFVYSAVLGLLLSGLLFVGFYST------HFLVDFFTSDTGTQNALLEIAGLIIFSQPLNSLVFAADGVLQGASEFPYQAKSMLISGFVTAIFFWTLQTTGDSDKSLLFNIWAALICLQLMRGITSAVKIFDRNGPIKLGGSP 517          
BLAST of NO09G00820 vs. NCBI_GenBank
Match: PSQ97442.1 (MATE family efflux transporter [Bacteroidetes bacterium SW_9_63_38])

HSP 1 Score: 232.3 bits (591), Expect = 5.600e-57
Identity = 146/405 (36.05%), Postives = 229/405 (56.54%), Query Frame = 0
Query:  356 ILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVFVFSLYILNFLATSTTPIVANLRAQGEDEAARELVGRLLFFAGMLGLALIPILQTLSYPLLNLLGARPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGYLDTSTPLIIAAIAFVVDYSVNPELVYPADPKGLGAAGAATVISEWLSAGLFLTKFLTMKPPILLVFDLFPPWAEMAPVVQASAQIFIRTVLLQALLATSCIAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLRGRELSQLLIKWGVALGGVLAVFYATAQILQPDVLPRFFTEDQGILDKVHPIVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVLTMGLSALFAGSLFFLL--RDEGLTAVW 759
            IL +A P +A LA +PL+SL+DT ++G  LG V L+A G++  +F  +  + NFLA  TTP V     + + E A   V R L  A ++G+  + +LQ L+ P+L L+GA  E    A++Y +VR+   PA++L+   +GA RGY DT TP+++     + +  ++P L++  D  GL  A AAT I++WL A +FL   L  +   L +   +P    + P ++    + +RT  L   +  +   AAR+G   +AAHQVA QLW+  + + +A ++AAQ LV+  LG  D    R +S  L +WG+ +G VL V +    +L+P VLP FFT+D   +  +  +   +A++QP+NGLV VG G+  GA+ F Y    M  +AL A ++  L+     GL  VW
Sbjct:   11 ILALAVPALAGLAADPLVSLIDTAFVGR-LGRVPLAALGVNTSIFSMTFVVFNFLAYGTTPRVGRALGEDDREEAGRAVVRALTLAVLVGIGALMVLQVLARPILQLMGASAELRGPALQYLRVRALAGPAVLLITAGHGAFRGYQDTRTPMVVTIGFNIANAGLDPLLMFILD-WGLVGAAAATAIAQWLGALVFLWLLLGRRREALGIRLQWPSLRSLVPFLKVGCDLLLRTGSLVGTMTLATAVAARVGVTAVAAHQVAHQLWLFLALVVDALAVAAQALVSKHLGADDPETARAVSDRLFQWGLLVGVVLGVGFF---LLRP-VLPAFFTDDPDTIAALLDVYLFVALLQPLNGLVFVGDGIYMGAEAFPYLAKAMIGTALTAAAVLGLVGPMGWGLPGVW 409          
The following BLAST results are available for this feature:
BLAST of NO09G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27720.10.000e+078.25dna-damage-inducible protein f [Nannochloropsis ga... [more]
WP_013179423.11.100e-6038.03MATE family efflux transporter [Truepera radiovict... [more]
XP_002184243.14.100e-6035.06multi antimicrobial extrusion family protein [Phae... [more]
XP_002292516.11.200e-5934.22mate efflux protein, multi antimicrobial extrusion... [more]
EJK51342.12.700e-5934.71hypothetical protein THAOC_29490 [Thalassiosira oc... [more]
WP_105012247.12.700e-5938.24MATE family efflux transporter [Salinibacter sp. 1... [more]
GAX26011.14.600e-5935.32hypothetical protein FisN_4Hh494 [Fistulifera sola... [more]
GAX24369.11.700e-5835.16hypothetical protein FisN_4Lh494 [Fistulifera sola... [more]
OEU21900.12.300e-5832.13MATE efflux family protein [Fragilariopsis cylindr... [more]
PSQ97442.15.600e-5736.05MATE family efflux transporter [Bacteroidetes bact... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010552NSK010552Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G00820.1NO09G00820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|528120gene_4475Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100034g7gene2852Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G00820.1NO09G00820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G00820 ID=NO09G00820|Name=NO09G00820|organism=Nannochloropsis oceanica|type=gene|length=2481bp
ATGTGGTCATCAATACAGCTTTTGCCGTATTTGCTTCTTGCGCTGCTCCT
TGGGTATACGATACGGTACTGCCAAGGTTTTCGGCCACCTTTTCGAAGAC
CACAGGAGCGGGCAAGCAAACAGGCCCTCCTTATCCCTTTTAAGGATTGT
CTTCGGCCCCTCTTTTCGGCGGACGAAAATGTTAGCAGTACCAGTGTTGT
GGGTGAACGACCACGGGCCCGCGGCAGCAGCGGAACTTTGCGGTTGAAGG
AGCTGTTGCAGCGGCGGCTCCTTTTCGTGGTTGAGACAGTTGGTGGAATT
GATCGCGCTGCACTCTTTTTGACAAGGTGTGATTTAGTTGGGGACGGCGT
GGAGCTCTTTCCTGCCGTGGCCTTTCCCTCTAGCGAGGAAAACTGGATGC
TCACTCAGGTGGCTGCCGTGCAGCCGAAGAAGAGGACAGGCAGGAACGGG
AACAGCAGCACCCCGCTCACCTTTTTTTTGCCTAGTGGGGAATTGGCAGT
TCGCATTAGCCATGGCTCTCAGCTGGTGGCGGTGCTGGTTGTGGACGATG
AAAAGCGGCGCAAGACTCGGAGGAGACAGAAAGACGGCTCGCCATCACGC
GAGGCGGAACTGAAACTCTCCGCGGCCCGCATGGGTCGCATCGAAGAGGT
TGCCTCCCGCGTATTCGGCACTGTCTTGAAGGACGCCTTAGTGAGCGACC
AGCAAGCACTCGCAGCCGAGTCCGTTTCCTCTTCTGGCTTGATACGGACC
GAGGTGCTGCCCTTCATCGGGACCATGCCTGGAGAGGCCGCGAGACCCCC
ACCAGGGAGTCCCGAGGCCATTGCCGCGGCCTACCAGAGCGAGCTAGCAC
GCATTGAAACTGAGACATTCACATCAGCCACTCTGGCCAAGGCGAACTTG
AACGCCAACGCCTCCTCATCCTCTATCCTCTCCTCGGACGTGACCATCTC
CGTTGGCGGTGCCACCAATATCACCTTCGATCTCCACCTGCTGGAGGACT
TTAAGCACATCTTCGACGACATCCAGTTGAGCGGTATCAGCCTGGAGAAT
AACACAAATCTTTTCATCCTCCAGGTTGCTGCCCCGGTGGTGGCCGCCCT
GGCACTCGAGCCCCTCATTTCCCTCGTCGATACCTACTATATCGGCCACT
TTCTAGGCTCTGTCTCCCTCTCAGCCTACGGCATCTCCGAGCGTGTCTTT
GTCTTCAGCCTTTACATTCTTAATTTTCTGGCGACGTCCACTACCCCCAT
TGTCGCAAACCTGCGCGCCCAAGGGGAAGACGAAGCTGCCCGGGAGCTTG
TTGGCCGACTGCTTTTCTTCGCGGGCATGCTCGGCCTCGCCCTCATCCCC
ATCCTCCAAACCCTGTCATACCCCCTGCTCAATCTTTTAGGGGCCCGGCC
AGAAAATTACGCCGAAGCCGTCGAGTACTTTCAGGTCAGAAGCTGGGGTA
CGCCCGCGCTTATGCTCGTAGCCGTCTCCAACGGAGCTTTGCGTGGGTAC
TTGGACACGTCCACCCCCCTCATCATTGCCGCCATTGCCTTTGTCGTCGA
TTATTCCGTGAACCCCGAGTTGGTCTACCCCGCTGACCCCAAGGGTCTGG
GTGCCGCGGGTGCCGCTACGGTCATTTCGGAGTGGCTGTCGGCGGGCTTG
TTCCTGACTAAGTTCCTGACTATGAAGCCGCCCATTCTCCTCGTCTTTGA
CCTTTTTCCCCCTTGGGCCGAGATGGCCCCAGTGGTGCAGGCCTCGGCGC
AGATCTTTATTCGGACTGTGCTCCTTCAGGCCCTTCTTGCCACCTCTTGT
ATAGCTGCTGCTCGCATTGGCCCTTTGGACATCGCCGCGCACCAAGTCGC
CCTCCAATTATGGATCCCTCCTTCGTTCTTGACCGAGGCCTTCTCGATTG
CCGCGCAGGGGCTGGTGGCCGACGCACTGGGTCGTGGAGACCGGTTGCGG
GGGCGGGAGCTCAGTCAGCTTCTAATAAAGTGGGGTGTGGCTTTGGGTGG
GGTCTTGGCCGTGTTTTACGCGACAGCCCAGATCTTGCAGCCGGACGTGC
TGCCCCGCTTCTTTACGGAAGATCAAGGGATTTTGGACAAGGTCCACCCG
ATTGTGTGGCTGATTGCCATCATGCAGCCCATCAATGGCTTGGTGAACGT
GGGTGGCGGGGTGCTGCAAGGCGCGCAGGACTTTACCTACCAAGTATTGA
CCATGGGGCTGAGCGCGCTGTTTGCGGGATCACTCTTCTTCTTATTGCGG
GACGAGGGTTTGACAGCTGTGTGGGAGACGCTCCTCGCCTTTCAGATCAT
GCGGGCCATCCTGTTTGCCTACCGATTCATAGAGCCACAGGGTCCCTTAA
GTATAGTGCAGGAGCCAGGGGTGGCCAAAGGGGTATTGGCAGGCTCCATG
TTCAGGGTTTGGGGCCACGACAAGAACGTACCAAAGAAAAAGAAAAAGAA
GAAGAAGCGGTATTGGTTTAACGACTTGTAA
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protein sequence of NO09G00820.1

>NO09G00820.1-protein ID=NO09G00820.1-protein|Name=NO09G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=827bp
MWSSIQLLPYLLLALLLGYTIRYCQGFRPPFRRPQERASKQALLIPFKDC
LRPLFSADENVSSTSVVGERPRARGSSGTLRLKELLQRRLLFVVETVGGI
DRAALFLTRCDLVGDGVELFPAVAFPSSEENWMLTQVAAVQPKKRTGRNG
NSSTPLTFFLPSGELAVRISHGSQLVAVLVVDDEKRRKTRRRQKDGSPSR
EAELKLSAARMGRIEEVASRVFGTVLKDALVSDQQALAAESVSSSGLIRT
EVLPFIGTMPGEAARPPPGSPEAIAAAYQSELARIETETFTSATLAKANL
NANASSSSILSSDVTISVGGATNITFDLHLLEDFKHIFDDIQLSGISLEN
NTNLFILQVAAPVVAALALEPLISLVDTYYIGHFLGSVSLSAYGISERVF
VFSLYILNFLATSTTPIVANLRAQGEDEAARELVGRLLFFAGMLGLALIP
ILQTLSYPLLNLLGARPENYAEAVEYFQVRSWGTPALMLVAVSNGALRGY
LDTSTPLIIAAIAFVVDYSVNPELVYPADPKGLGAAGAATVISEWLSAGL
FLTKFLTMKPPILLVFDLFPPWAEMAPVVQASAQIFIRTVLLQALLATSC
IAAARIGPLDIAAHQVALQLWIPPSFLTEAFSIAAQGLVADALGRGDRLR
GRELSQLLIKWGVALGGVLAVFYATAQILQPDVLPRFFTEDQGILDKVHP
IVWLIAIMQPINGLVNVGGGVLQGAQDFTYQVLTMGLSALFAGSLFFLLR
DEGLTAVWETLLAFQIMRAILFAYRFIEPQGPLSIVQEPGVAKGVLAGSM
FRVWGHDKNVPKKKKKKKKRYWFNDL*
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Synonyms
Publications