NO09G00710, NO09G00710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G00710 vs. NCBI_GenBank
Match: XP_009521845.1 (hypothetical protein PHYSODRAFT_354168 [Phytophthora sojae] >EGZ19128.1 hypothetical protein PHYSODRAFT_354168 [Phytophthora sojae]) HSP 1 Score: 247.7 bits (631), Expect = 2.800e-62 Identity = 113/172 (65.70%), Postives = 141/172 (81.98%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTY 178 +RQ+QVVGR PTE PNP +RMK+FAPN V+A+SRFWYFLHQM KMKKTTGEILD+NEL E+N R+V NY IW++Y+SRSGTHNMY+EYRD+TL AV+Q+YSE+AGRHRAR RSIQI+RT +V AKD ++T+ Q+H+SKI FPL HR+ R K + V+KA RP T+ Sbjct: 3 IRQFQVVGRKAPTEKEPNPPAYRMKLFAPNPVLAQSRFWYFLHQMKKMKKTTGEILDINELTEKNRRVVNNYGIWIRYNSRSGTHNMYKEYRDVTLCKAVEQMYSELAGRHRARPRSIQIMRTAIVAAKDTQKTNVQQFHDSKISFPLSHRLPRAAEKHHKTVFKASRPCTF 174
BLAST of NO09G00710 vs. NCBI_GenBank
Match: XP_009038926.1 (hypothetical protein AURANDRAFT_60205 [Aureococcus anophagefferens] >EGB06346.1 hypothetical protein AURANDRAFT_60205 [Aureococcus anophagefferens]) HSP 1 Score: 245.7 bits (626), Expect = 1.100e-61 Identity = 116/170 (68.24%), Postives = 136/170 (80.00%), Query Frame = 0 Query: 9 YQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTYF 179 YQV+GR PT P P+V+RMK+FAPNEV+A+SR+WY++HQ KMKKTTGEILDVNE+ E+N RIVKNY + L+Y+SRS THNMYREYRDLTLTGA+DQLYSEMAGRHRAR RSIQIIRTG+V KD KR T Q+ +KFPLPHRI RP K R + A RP T+F Sbjct: 7 YQVIGRKAPTPQEPEPSVYRMKLFAPNEVLARSRYWYYMHQYRKMKKTTGEILDVNEIREKNPRIVKNYYVMLRYNSRSNTHNMYREYRDLTLTGAIDQLYSEMAGRHRARPRSIQIIRTGIVDPKDLKRPATQQFAAKGLKFPLPHRIMRPSQKKFRATFVANRPCTHF 176
BLAST of NO09G00710 vs. NCBI_GenBank
Match: XP_008897642.1 (hypothetical protein PPTG_05682 [Phytophthora parasitica INRA-310] >ETI32919.1 hypothetical protein F443_20346 [Phytophthora parasitica P1569] >ETK73262.1 hypothetical protein L915_19781 [Phytophthora parasitica] >ETL26699.1 hypothetical protein L916_19666 [Phytophthora parasitica] >ETL79915.1 hypothetical protein L917_19518 [Phytophthora parasitica] >ETM33177.1 hypothetical protein L914_19553 [Phytophthora parasitica] >ETN16482.1 hypothetical protein PPTG_05682 [Phytophthora parasitica INRA-310] >ETO61650.1 hypothetical protein F444_20347 [Phytophthora parasitica P1976] >ETP02736.1 hypothetical protein F441_20219 [Phytophthora parasitica CJ01A1] >ETP30905.1 hypothetical protein F442_20160 [Phytophthora parasitica P10297]) HSP 1 Score: 245.7 bits (626), Expect = 1.100e-61 Identity = 112/172 (65.12%), Postives = 140/172 (81.40%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTY 178 +RQ+QVVGR PTE PNP +RMK+FAPN V+A+SRFWYFLHQM KMKKTTGEILD+NEL E+N R+V NY IW++Y+SRSGTHNMY+EYRD+TL AV+Q+Y+E+AGRHRAR RSIQI+RT +V AKD ++T+ Q+H+SKI FPL HR+ R K V+KA RP T+ Sbjct: 3 IRQFQVVGRKAPTEKEPNPPAYRMKLFAPNPVLAQSRFWYFLHQMKKMKKTTGEILDINELTEKNRRVVNNYGIWIRYNSRSGTHNMYKEYRDVTLCKAVEQMYAELAGRHRARPRSIQIMRTAIVAAKDTQKTNVQQFHDSKISFPLSHRLPRAAEKHHNTVFKASRPCTF 174
BLAST of NO09G00710 vs. NCBI_GenBank
Match: CCI45297.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 242.3 bits (617), Expect = 1.200e-60 Identity = 110/154 (71.43%), Postives = 134/154 (87.01%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQR 160 +RQYQV GR PTE PNP ++RMK+FAPNEV+AKSRFWYFLHQ+ KMKKTTGEILDVNEL E+N RIVKNY +W++Y+SRSGTHNMY+EYRD+TL GA++Q+YSE+AGRHRAR RSIQI+RT ++ AKD K+ + Q+H+SKIKFPL HRI R Sbjct: 365 IRQYQVSGRKAPTEKEPNPPIYRMKLFAPNEVLAKSRFWYFLHQVKKMKKTTGEILDVNELREKNNRIVKNYGVWIRYNSRSGTHNMYKEYRDITLCGAIEQMYSELAGRHRARPRSIQIMRTAILAAKDTKKPNIKQFHDSKIKFPLTHRIPR 518
BLAST of NO09G00710 vs. NCBI_GenBank
Match: OEU22445.1 (putative 60S ribosomal protein RPL18A [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 236.1 bits (601), Expect = 8.400e-59 Identity = 114/175 (65.14%), Postives = 138/175 (78.86%), Query Frame = 0 Query: 6 LRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQ--RPPTKSLRG-VYKAVRPNTY 178 ++QYQVVGR PTE +PNP +RM IF+PN V+AKS+FWY++HQ KMKKTTGEILDV E+VE+N RIVKNY IWL+Y+SRSGTHNMYRE+RD++LTGAV QLY EMAGRHRAR RSIQIIRT V AKD KR + MQ+ + +KFPL HR+ + K+L G + VRP TY Sbjct: 7 MKQYQVVGRKAPTEENPNPEAYRMIIFSPNAVIAKSKFWYYMHQFRKMKKTTGEILDVVEIVEKNRRIVKNYGIWLRYNSRSGTHNMYREFRDVSLTGAVSQLYDEMAGRHRARPRSIQIIRTSTVAAKDLKRANGMQFAQANVKFPLAHRVASGKRGQKALSGSTFTTVRPTTY 181
BLAST of NO09G00710 vs. NCBI_GenBank
Match: XP_002180720.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48128.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 233.4 bits (594), Expect = 5.500e-58 Identity = 113/180 (62.78%), Postives = 132/180 (73.33%), Query Frame = 0 Query: 2 VQSRLRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRI---QRPPTKSLRGVYKAVRPNTYF 179 V +RQYQVVGRH E HPNP +RM IFAPN +AKS+FWY++HQ KMKKTTGEILD ELVE+N+RIVKNY IWL+Y SRSGTHNMYRE+RD+ LTGAV QLY EMAGRHR R RSIQIIRT V AKD R + Q+ +K++FPLPHR+ +R Y VRP T+F Sbjct: 3 VAGLMRQYQVVGRHAANEEHPNPEAYRMIIFAPNPTIAKSKFWYYMHQFRKMKKTTGEILDCVELVEKNSRIVKNYGIWLRYSSRSGTHNMYREFRDVKLTGAVSQLYDEMAGRHRTRPRSIQIIRTAQVAAKDLLRVNPTQFAKAKVQFPLPHRVASGKRGQKALSDRTYSTVRPTTFF 182
BLAST of NO09G00710 vs. NCBI_GenBank
Match: XP_002289814.1 (RL18a, ribosomal protein 18a 60S large ribosomal subunit [Thalassiosira pseudonana CCMP1335] >EED93351.1 RL18a, ribosomal protein 18a 60S large ribosomal subunit [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 226.5 bits (576), Expect = 6.700e-56 Identity = 111/180 (61.67%), Postives = 133/180 (73.89%), Query Frame = 0 Query: 2 VQSRLRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQ--RPPTKSLRG-VYKAVRPNTYF 179 V +RQYQVVGR T+ +PNP +RM IFAPN VAKS+FWYF+ Q KMKKTTGEILD E++E+N+R VKNY IWL+YDSRSGTHNMYREYRDL LTGA+ QLY EMAGRHR R RSIQIIRT + A + KR + Q+ +K+KFPLPHR+ + K+L + VRP TYF Sbjct: 3 VAGAMRQYQVVGRKAGTDENPNPEAYRMIIFAPNPTVAKSKFWYFMRQFRKMKKTTGEILDCVEIIEKNSRTVKNYGIWLRYDSRSGTHNMYREYRDLKLTGAISQLYDEMAGRHRTRPRSIQIIRTATLGAGELKRPNGAQFAQAKVKFPLPHRVDSAKRGQKALSDRTFSTVRPTTYF 182
BLAST of NO09G00710 vs. NCBI_GenBank
Match: GAX28322.1 (large subunit ribosomal protein L18Ae [Fistulifera solaris] >GAX13535.1 large subunit ribosomal protein L18Ae [Fistulifera solaris]) HSP 1 Score: 225.3 bits (573), Expect = 1.500e-55 Identity = 110/180 (61.11%), Postives = 133/180 (73.89%), Query Frame = 0 Query: 2 VQSRLRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRI---QRPPTKSLRGVYKAVRPNTYF 179 V ++RQ+QVVGR P+E HPNP +RM +FA N V+AKS+FWY++HQ HKMKKTTGEILD E+ E+N+RIV NYAIWL+Y S SGTHNMYRE+RD+TLTGAV QLY EMAGRHR R RSIQIIRTG+V A KR + MQY + KFPL HR+ +R + VRP T+F Sbjct: 3 VAGKMRQFQVVGRKAPSEEHPNPEAYRMIVFATNPVIAKSKFWYYMHQFHKMKKTTGEILDCVEIFEKNSRIVNNYAIWLRYSSNSGTHNMYREFRDVTLTGAVSQLYDEMAGRHRTRPRSIQIIRTGIVGAGSLKRANPMQYAKN-AKFPLVHRVASGKRGQKALSDRTFSTVRPTTFF 181
BLAST of NO09G00710 vs. NCBI_GenBank
Match: XP_010538246.1 (PREDICTED: 60S ribosomal protein L18a-like [Tarenaya hassleriana]) HSP 1 Score: 224.6 bits (571), Expect = 2.500e-55 Identity = 105/177 (59.32%), Postives = 134/177 (75.71%), Query Frame = 0 Query: 1 MVQSRLRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTY 178 MV R QYQVVGR +PTEA +P ++RMK++A NEV AKS+FWYFL ++ K+KK+ G+IL +NE+ E+N +KNY IWL+Y SR+G HNMY+EYRD+TL GAV+Q+Y+EMA RHR RF IQII+T V AK KR T Q+HNSKIKFPL R RPPT+ L+ YKA +PN + Sbjct: 1 MVTFRFHQYQVVGRALPTEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDITLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLF 177
BLAST of NO09G00710 vs. NCBI_GenBank
Match: XP_007048983.1 (PREDICTED: 60S ribosomal protein L18a [Theobroma cacao] >XP_021273779.1 60S ribosomal protein L18a [Herrania umbratica] >EOX93140.1 Ribosomal protein L18ae/LX family protein [Theobroma cacao]) HSP 1 Score: 222.6 bits (566), Expect = 9.600e-55 Identity = 103/177 (58.19%), Postives = 133/177 (75.14%), Query Frame = 0 Query: 1 MVQSRLRQYQVVGRHVPTEAHPNPTVFRMKIFAPNEVVAKSRFWYFLHQMHKMKKTTGEILDVNELVERNARIVKNYAIWLKYDSRSGTHNMYREYRDLTLTGAVDQLYSEMAGRHRARFRSIQIIRTGVVTAKDAKRTHTMQYHNSKIKFPLPHRIQRPPTKSLRGVYKAVRPNTY 178 MV R QYQVVGR +PTEA +P ++RMK++A NEV AKS+FWYFL ++ K+KK+ G++L +NE+ E+N +KNY IWL+Y SR+G HNMY+EYRD TL GAV+Q+Y+EMA RHR RF IQII+T + AK KR T Q+HNSKIKFPL + RPPT+ L+ YKA RPN + Sbjct: 1 MVSFRYHQYQVVGRGLPTEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATIPAKLCKRDSTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 177 The following BLAST results are available for this feature:
BLAST of NO09G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G00710 ID=NO09G00710|Name=NO09G00710|organism=Nannochloropsis oceanica|type=gene|length=3953bpback to top protein sequence of NO09G00710.1 >NO09G00710.1-protein ID=NO09G00710.1-protein|Name=NO09G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=180bpback to top Synonyms
Publications
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