NO08G04220, NO08G04220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G04220 vs. NCBI_GenBank
Match: XP_020627346.1 (MFS-type transporter SLC18B1-like isoform X1 [Orbicella faveolata] >XP_020627347.1 MFS-type transporter SLC18B1-like isoform X2 [Orbicella faveolata]) HSP 1 Score: 110.5 bits (275), Expect = 2.300e-20 Identity = 75/211 (35.55%), Postives = 114/211 (54.03%), Query Frame = 0 Query: 218 RRFFVLCACTLVGFVMNVMVSVVAPFFPQEAKARTGTSNTVVGLIFAVFPLTNLIICPIVNMAIRRLGRKNLLLVGLLTLGAATIGFGLSSTIAGWT-------CSRILQGAGSAAAGATYYAILSDMYSKNLGLIIGIQEAVTGLGYMVGPVLGAALYSLGGFQLPFLVLGLCPL----LVCISLPP---LLRDAHSFDPIR--QLPGAS 413 RR F L A LV F ++++PFFP EA+ G S T++GLIF ++PL ++ P++ + + +G K L GL + I FG S + T R++ G AAA +AI++ + N+G + G E TGLG+M+GP LG LYS GGF+LPF+V+G L +V + LP LR+ +S ++ ++PG S Sbjct: 74 RRKFTLVALCLVYFAATASFAILSPFFPGEAQ-EMGASGTMIGLIFGIYPLVVFVVAPLIGVLLPTIGPKFTLTAGLFLCSGSQILFGFVSMLPKGTVFVVFCFLLRVVTALGGAAADTASFAIVAGEFGTNIGKVTGAMETFTGLGFMLGPPLGGILYSAGGFKLPFIVMGGLLLSILPVVLVILPKDENFLRETNSGSLLQATKIPGIS 283
BLAST of NO08G04220 vs. NCBI_GenBank
Match: XP_014681777.1 (PREDICTED: MFS-type transporter SLC18B1-like [Priapulus caudatus] >XP_014681785.1 PREDICTED: MFS-type transporter SLC18B1-like [Priapulus caudatus] >XP_014681791.1 PREDICTED: MFS-type transporter SLC18B1-like [Priapulus caudatus] >XP_014681798.1 PREDICTED: MFS-type transporter SLC18B1-like [Priapulus caudatus] >XP_014681807.1 PREDICTED: MFS-type transporter SLC18B1-like [Priapulus caudatus] >XP_014681816.1 PREDICTED: MFS-type transporter SLC18B1-like [Priapulus caudatus]) HSP 1 Score: 105.9 bits (263), Expect = 5.600e-19 Identity = 64/175 (36.57%), Postives = 96/175 (54.86%), Query Frame = 0 Query: 223 LCACTLVGFVMNVMVSVVAPFFPQEAKARTGTSNTVVGLIFAVFPLTNLIICPIVNMAIRRLGRKNLLLVGLLTLGAATIGFGL--------SSTIAGWTCSRILQGAGSAAAGATYYAILSDMYSKNLGLIIGIQEAVTGLGYMVGPVLGAALYSLGGFQLPFLVLGLCPLLVC 390 L + +V F + +S++APFFP+ A + G S+TV G +F ++ L + CPI+ M + R+G K + L G+ G + FGL T+ + RI + G+A YAI+ D+Y N+G + G+ E GLG MVGP +G LY +GGF LPF V+G + VC Sbjct: 127 LLSLAVVDFTAYLSMSIIAPFFPKTANEK-GMSDTVSGFVFGIYALVMFLGCPIIGMLLPRIGPKFVFLSGMFVTGICNVLFGLLVYAHDGFEFTVLCFIV-RIFEALGAAGFTTATYAIIIDIYPDNIGTVFGVLETFVGLGMMVGPAIGGVLYKVGGFILPFSVVGGFIIFVC 299
BLAST of NO08G04220 vs. NCBI_GenBank
Match: XP_003107011.1 (hypothetical protein CRE_17083 [Caenorhabditis remanei] >EFO96851.1 hypothetical protein CRE_17083 [Caenorhabditis remanei]) HSP 1 Score: 105.1 bits (261), Expect = 9.600e-19 Identity = 65/180 (36.11%), Postives = 94/180 (52.22%), Query Frame = 0 Query: 218 RRFFVLCACTLVGFVMNVMVSVVAPFFPQEAKARTGTSNTVVGLIFAVFPLTNLIICPIVNMAIRRLGRKNLLLVGLLTLGAATIGFGL-----SSTIAGW--TCSRILQGAGSAAAGATYYAILSDMYSKNLGLIIGIQEAVTGLGYMVGPVLGAALYSLGGFQLPFLVLGLCPLLVCI 391 R+ + +L + S +APF+P EAK + S T G++F +F T II PI I +G + + +VG+ G I FG S + W RIL+ G AA + +AI + + KN+ ++GI E GLGY GPV+G LY +GGFQLPFLVLG+ L+ + Sbjct: 222 RQILSISMLSLANLCSTIAFSCIAPFYPAEAKLK-NLSETQTGIVFGIFEFTMFIISPIFGKYIILIGARTMFIVGIAVTGFTAILFGFLNYLPSGQVFFWFSVLVRILEAVGDAAFVTSSFAIAAKSFPKNVAFVVGILETFAGLGYTAGPVIGGLLYDIGGFQLPFLVLGVVLLVAAV 400
BLAST of NO08G04220 vs. NCBI_GenBank
Match: OZG22476.1 (hypothetical protein FL83_03161, partial [Caenorhabditis latens]) HSP 1 Score: 105.1 bits (261), Expect = 9.600e-19 Identity = 65/180 (36.11%), Postives = 94/180 (52.22%), Query Frame = 0 Query: 218 RRFFVLCACTLVGFVMNVMVSVVAPFFPQEAKARTGTSNTVVGLIFAVFPLTNLIICPIVNMAIRRLGRKNLLLVGLLTLGAATIGFGL-----SSTIAGW--TCSRILQGAGSAAAGATYYAILSDMYSKNLGLIIGIQEAVTGLGYMVGPVLGAALYSLGGFQLPFLVLGLCPLLVCI 391 R+ + +L + S +APF+P EAK + S T G++F +F T II PI I +G + + +VG+ G I FG S + W RIL+ G AA + +AI + + KN+ ++GI E GLGY GPV+G LY +GGFQLPFLVLG+ L+ + Sbjct: 220 RQILSISMLSLANLCSTIAFSCIAPFYPAEAKLK-NLSETQTGIVFGIFEFTMFIISPIFGKYIILIGARTMFIVGIAVTGFTAILFGFLNYLPSGQVFFWFSVLVRILEAVGDAAFVTSSFAIAAKSFPKNVAFVVGILETFAGLGYTAGPVIGGLLYDIGGFQLPFLVLGVVLLVAAV 398
BLAST of NO08G04220 vs. NCBI_GenBank
Match: POM51949.1 (hypothetical protein FL81_00076 [Caenorhabditis remanei]) HSP 1 Score: 105.1 bits (261), Expect = 9.600e-19 Identity = 65/180 (36.11%), Postives = 94/180 (52.22%), Query Frame = 0 Query: 218 RRFFVLCACTLVGFVMNVMVSVVAPFFPQEAKARTGTSNTVVGLIFAVFPLTNLIICPIVNMAIRRLGRKNLLLVGLLTLGAATIGFGL-----SSTIAGW--TCSRILQGAGSAAAGATYYAILSDMYSKNLGLIIGIQEAVTGLGYMVGPVLGAALYSLGGFQLPFLVLGLCPLLVCI 391 R+ + +L + S +APF+P EAK + S T G++F +F T II PI I +G + + +VG+ G I FG S + W RIL+ G AA + +AI + + KN+ ++GI E GLGY GPV+G LY +GGFQLPFLVLG+ L+ + Sbjct: 223 RQILSISMLSLANLCSTIAFSCIAPFYPAEAKLK-NLSETQTGIVFGIFEFTMFIISPIFGKYIILIGARTMFIVGIAVTGFTAILFGFLNYLPSGQVFFWFSVLVRILEAVGDAAFVTSSFAIAAKSFPKNVAFVVGILETFAGLGYTAGPVIGGLLYDIGGFQLPFLVLGVVLLVAAV 401
BLAST of NO08G04220 vs. NCBI_GenBank
Match: OZG07302.1 (hypothetical protein FL82_00075, partial [Caenorhabditis remanei]) HSP 1 Score: 104.8 bits (260), Expect = 1.200e-18 Identity = 65/180 (36.11%), Postives = 94/180 (52.22%), Query Frame = 0 Query: 218 RRFFVLCACTLVGFVMNVMVSVVAPFFPQEAKARTGTSNTVVGLIFAVFPLTNLIICPIVNMAIRRLGRKNLLLVGLLTLGAATIGFGL-----SSTIAGW--TCSRILQGAGSAAAGATYYAILSDMYSKNLGLIIGIQEAVTGLGYMVGPVLGAALYSLGGFQLPFLVLGLCPLLVCI 391 R+ + +L + S +APF+P EAK + S T G++F +F T II PI I +G + + +VG+ G I FG S + W RIL+ G AA + +AI + + KN+ ++GI E GLGY GPV+G LY +GGFQLPFLVLG+ L+ + Sbjct: 223 RQILSISMLSLANLCSTIAFSCIAPFYPAEAKLK-NLSETQTGIVFGIFEFTMFIISPIFGKYIIFIGARTMFIVGIAVTGFTAILFGFLNYLPSGQVFFWFSVLVRILEAVGDAAFVTSSFAIAAKSFPKNVAFVVGILETFAGLGYTAGPVIGGLLYDIGGFQLPFLVLGVVLLVAAV 401
BLAST of NO08G04220 vs. NCBI_GenBank
Match: CAP27967.2 (Protein CBG08069 [Caenorhabditis briggsae]) HSP 1 Score: 103.6 bits (257), Expect = 2.800e-18 Identity = 63/173 (36.42%), Postives = 90/173 (52.02%), Query Frame = 0 Query: 218 RRFFVLCACTLVGFVMNVMVSVVAPFFPQEAKARTGTSNTVVGLIFAVFPLTNLIICPIVNMAIRRLGRKNLLLVGLLTLGAATIGFGLSSTIAGWTCSRILQGAGSAAAGATYYAILSDMYSKNLGLIIGIQEAVTGLGYMVGPVLGAALYSLGGFQLPFLVLGLCPLLVCI 391 R+ + +L V S +APF+P EAK + S T G++F +F T II PI I +G + + +VG+ G I FG+ RIL+ G AA + +AI + + KN+ ++GI E GLGY GPV+G Y +GGFQLPFLVLG+ L + Sbjct: 219 RQILSISMLSLANLCSTVAFSCIAPFYPAEAKLK-NLSETQTGIVFGIFEFTMFIISPIFGKYIIWIGARRMFIVGIAVTGLTAILFGV--------LVRILEAVGDAAFVTSSFAIAAKSFPKNVAFVVGILETFAGLGYTAGPVIGGFFYDIGGFQLPFLVLGIVLLAASV 382
BLAST of NO08G04220 vs. NCBI_GenBank
Match: XP_019867194.1 (PREDICTED: LOW QUALITY PROTEIN: MFS-type transporter SLC18B1-like [Aethina tumida]) HSP 1 Score: 103.6 bits (257), Expect = 2.800e-18 Identity = 68/180 (37.78%), Postives = 96/180 (53.33%), Query Frame = 0 Query: 229 VGFVMNVMVSVVAPFFPQEAKARTGTSNTVVGLIFAVFPLTNLIICPIVNMAIRRLGRKNLLLVGLLTLGAATIGFGLSSTIAGWT-------CSRILQGAGSAAAGATYYAILSDMYSKNLGLIIGIQEAVTGLGYMVGPVLGAALYSLGGFQLPFLVLGLCPLLVC---ISLPPLLRD 399 V F+ +S++APFFP+EA A G S+T+ G +F+ F L I PI + ++G K L L G+ T G I FG+ + +T R L+ G++A Y + + + N+G +IGI E GLG GP LG LYSLGGF LPF VLG+ +L+ I L P + D Sbjct: 117 VDFMSFCSMSIMAPFFPREA-AEKGLSDTLSGFVFSFFALVMFITSPIFGKVLPKIGAKFLFLAGMFTAGGCNILFGMLEYVHDFTLFTTLCIVIRGLEALGASAFSTASYVFVVNTFPNNIGSVIGILETFVGLGMSTGPALGGLLYSLGGFSLPFFVLGVAMILIVPINICLLPRVED 295
BLAST of NO08G04220 vs. NCBI_GenBank
Match: XP_021948081.1 (MFS-type transporter SLC18B1-like [Folsomia candida] >OXA57525.1 Vesicular acetylcholine transporter unc-17 [Folsomia candida]) HSP 1 Score: 103.2 bits (256), Expect = 3.600e-18 Identity = 60/173 (34.68%), Postives = 95/173 (54.91%), Query Frame = 0 Query: 218 RRFFVLCACTLVGFVMNVMVSVVAPFFPQEAKARTGTSNTVVGLIFAVFPLTNLIICPIVNMAIRRLGRKNLLLVGLLTLGAATIGFGLSSTIAGWT-------CSRILQGAGSAAAGATYYAILSDMYSKNLGLIIGIQEAVTGLGYMVGPVLGAALYSLGGFQLPFLVLGL 384 R++ VLC+ LV F +S++APFFP EA A+ G S +V G +F+V+ L + P+ + + + G K LL++G+ GA + FG+ + RI + G+AA + Y ++ ++ N+G ++GI E GLG GP +G LY LGG+ LPF LG+ Sbjct: 118 RQWLVLCSLALVDFTSFCAMSILAPFFPSEAAAK-GVSTSVSGFVFSVYALVVFLASPLTGIVVGQTGPKFLLILGVFLGGACNLLFGMLDQVESTPVFITYCFLVRIFEALGAAAFATSSYTFVAKIFPDNIGAVLGILETFVGLGMSFGPAIGGILYDLGGYALPFCTLGV 289
BLAST of NO08G04220 vs. NCBI_GenBank
Match: XP_011426493.1 (PREDICTED: MFS-type transporter SLC18B1 isoform X1 [Crassostrea gigas] >XP_011426494.1 PREDICTED: MFS-type transporter SLC18B1 isoform X1 [Crassostrea gigas] >XP_011426496.1 PREDICTED: MFS-type transporter SLC18B1 isoform X1 [Crassostrea gigas]) HSP 1 Score: 102.8 bits (255), Expect = 4.700e-18 Identity = 77/211 (36.49%), Postives = 106/211 (50.24%), Query Frame = 0 Query: 216 PMRRFFVLCACTLVGFVMNVMVSVVAPFFPQEAKARTGTSNTVVGLIFAVFPLTNLIICPIVNMAIRRLGRKNLLLVGLLTLGAATIGFGLSSTIAG--------WTCSRILQGAGSAAAGATYYAILSDMYSKNLGLIIGIQEAVTGLGYMVGPVLGAALYSLGGFQLPFLVLGLCPL----LVCISLPPLLRDAHSFDPIRQLPGASSP 415 P + +L + F S++ PFFP EA R GTS T+VGLIF +F L + + PI + ++G K L + G+L G TI FG+ G + C R L+ SAA + YAIL+D + K + ++G E TG+G MVGP +G LYSL G+ LPF VLG C L ++ + P L H I L SP Sbjct: 91 PREKKILLLMMAVCNFCAAANFSILGPFFPGEA-TRKGTSLTLVGLIFGIFELVSFLASPIFGNYMTKIGTKFLFVSGVLVSGICTILFGVLYYCPGGYRFILLCFLC-RTLEALASAAFVTSSYAILADAFPKYIATVVGYLELFTGVGMMVGPAIGGGLYSLSGYSLPFYVLG-CVLVAAGIISFFIMPKLDSVHRTLSISVLHLLKSP 298 The following BLAST results are available for this feature:
BLAST of NO08G04220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G04220 ID=NO08G04220|Name=NO08G04220|organism=Nannochloropsis oceanica|type=gene|length=5647bpback to top protein sequence of NO08G04220.4 >NO08G04220.4-protein ID=NO08G04220.4-protein|Name=NO08G04220.4|organism=Nannochloropsis oceanica|type=polypeptide|length=838bpback to top protein sequence of NO08G04220.3 >NO08G04220.3-protein ID=NO08G04220.3-protein|Name=NO08G04220.3|organism=Nannochloropsis oceanica|type=polypeptide|length=767bpback to top protein sequence of NO08G04220.2 >NO08G04220.2-protein ID=NO08G04220.2-protein|Name=NO08G04220.2|organism=Nannochloropsis oceanica|type=polypeptide|length=751bpback to top protein sequence of NO08G04220.1 >NO08G04220.1-protein ID=NO08G04220.1-protein|Name=NO08G04220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=767bpback to top Synonyms
Publications
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