NO08G03070, NO08G03070 (gene) Nannochloropsis oceanica

Overview
NameNO08G03070
Unique NameNO08G03070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1013
Alignment locationchr8:852371..853383 -

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Properties
Property NameValue
DescriptionKinesin-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:852371..853383 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
GO:0008017microtubule binding
GO:0005524ATP binding
GO:0005515protein binding
GO:0003774motor activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO:0009987cellular process
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR027640Kinesin-like_fam
IPR001752Kinesin_motor_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
Homology
[Close]
BLAST of NO08G03070 vs. NCBI_GenBank
Match: ETP50687.1 (hypothetical protein F442_04044 [Phytophthora parasitica P10297])

HSP 1 Score: 184.1 bits (466), Expect = 4.700e-43
Identity = 99/146 (67.81%), Postives = 115/146 (78.77%), Query Frame = 0 
Query:    2 NEHSSRSHSIVSVRVRGESLQGDRSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINALGSKNKAHVPFRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAKKGVVGSGPG 148
            NEHSSRSH ++S+ +   +    R    +SKLHLIDLAGSER+SKT A+G RLKEAQNIN+SLSALGDVI ALG+ +K HVP+RNSKLTFLLQDSL GNSKVLMFVN+SP  +N  ET+CSL FA RCR+VALG AK     SGPG
Sbjct:  921 NEHSSRSHLVLSITIETGTKSDAR--RRISKLHLIDLAGSERVSKTAASGQRLKEAQNINRSLSALGDVIAALGANSK-HVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWETLCSLNFASRCRSVALGQAKASTASSGPG 1063
[Close]
BLAST of NO08G03070 vs. NCBI_GenBank
Match: KUF97790.1 (hypothetical protein AM588_10009795 [Phytophthora nicotianae])

HSP 1 Score: 184.1 bits (466), Expect = 4.700e-43
Identity = 99/146 (67.81%), Postives = 115/146 (78.77%), Query Frame = 0 
Query:    2 NEHSSRSHSIVSVRVRGESLQGDRSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINALGSKNKAHVPFRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAKKGVVGSGPG 148
            NEHSSRSH ++S+ +   +    R    +SKLHLIDLAGSER+SKT A+G RLKEAQNIN+SLSALGDVI ALG+ +K HVP+RNSKLTFLLQDSL GNSKVLMFVN+SP  +N  ET+CSL FA RCR+VALG AK     SGPG
Sbjct:  631 NEHSSRSHLVLSITIETGTKSDAR--RRISKLHLIDLAGSERVSKTAASGQRLKEAQNINRSLSALGDVIAALGANSK-HVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWETLCSLNFASRCRSVALGQAKASTASSGPG 773
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BLAST of NO08G03070 vs. NCBI_GenBank
Match: KUF98223.1 (Kinesin protein KIFC3 [Phytophthora nicotianae])

HSP 1 Score: 182.2 bits (461), Expect = 1.800e-42
Identity = 98/146 (67.12%), Postives = 114/146 (78.08%), Query Frame = 0 
Query:    2 NEHSSRSHSIVSVRVRGESLQGDRSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINALGSKNKAHVPFRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAKKGVVGSGPG 148
            NEHSSRSH ++S+ +   +    R    +SKLHLIDLAGSER+ KT A+G RLKEAQNIN+SLSALGDVI ALG+ +K HVP+RNSKLTFLLQDSL GNSKVLMFVN+SP  +N  ET+CSL FA RCR+VALG AK     SGPG
Sbjct:  880 NEHSSRSHLVLSITIETGTKSDAR--RRISKLHLIDLAGSERVXKTAASGQRLKEAQNINRSLSALGDVIAALGANSK-HVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWETLCSLNFASRCRSVALGQAKASTASSGPG 1022
[Close]
BLAST of NO08G03070 vs. NCBI_GenBank
Match: POM66575.1 (Kinesin-like protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 177.9 bits (450), Expect = 3.400e-41
Identity = 97/138 (70.29%), Postives = 112/138 (81.16%), Query Frame = 0 
Query:    2 NEHSSRSHSIVSVRVR-GESLQGDRSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINALGSKNKAHVPFRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAK 139
            NEHSSRSH ++S+++  G    G R     SKLHLIDLAGSER+SKT A+G RLKEAQNIN+SLSALGDVI ALG+ +K HVP+RNSKLTFLLQDSL GNSKVLMFVN+SP  +N  ET+CSL FA RCR+VALG AK
Sbjct:  264 NEHSSRSHLVLSIKIETGIKSDGRR---RTSKLHLIDLAGSERVSKTAASGQRLKEAQNINRSLSALGDVIAALGANSK-HVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWETLCSLNFASRCRSVALGQAK 397
[Close]
BLAST of NO08G03070 vs. NCBI_GenBank
Match: XP_009844677.1 (hypothetical protein H257_17552 [Aphanomyces astaci] >ETV65814.1 hypothetical protein H257_17552 [Aphanomyces astaci])

HSP 1 Score: 176.4 bits (446), Expect = 9.800e-41
Identity = 94/138 (68.12%), Postives = 113/138 (81.88%), Query Frame = 0 
Query:    1 MNEHSSRSHSIVSVRVRGESLQGDRSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINALGSKNKAHVPFRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAK 139
            +NEHSSRSH ++S+ +   S + D S  T SKLHLIDLAGSER+SKT A+G RLKEAQ+IN+SLSALGDVI++LG  +K HVP+RNSKLTFLLQ+SL GNSKVLMFVN+SP  +N SE++CSL FA RCR VALG  K
Sbjct:  886 VNEHSSRSHLVLSITIT-TSQKSDPSKKTTSKLHLIDLAGSERISKTAASGQRLKEAQHINRSLSALGDVISSLGGHSK-HVPYRNSKLTFLLQESLSGNSKVLMFVNVSPVQWNASESLCSLNFAQRCRNVALGQLK 1021
[Close]
BLAST of NO08G03070 vs. NCBI_GenBank
Match: XP_024579568.1 (kinesin-like protein [Plasmopara halstedii] >CEG43199.1 kinesin-like protein [Plasmopara halstedii])

HSP 1 Score: 176.4 bits (446), Expect = 9.800e-41
Identity = 96/144 (66.67%), Postives = 114/144 (79.17%), Query Frame = 0 
Query:    2 NEHSSRSHSIVSVRVRGESLQGDRSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINALGSKNKAHVPFRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAKKGVVGSG 146
            NEHSSRSH ++S+ +  E+     +   +SK+HLIDLAGSER+SKT A+G RLKEAQNIN+SLSALGDVI ALG+ +K HVP+RNSKLTFLLQDSL GNSKVLMFVN+SP  +N  ET+CSL FA RCR+VALG AK     SG
Sbjct: 1209 NEHSSRSHLVLSISI--ETGIKSEARRRISKMHLIDLAGSERVSKTAASGQRLKEAQNINRSLSALGDVIAALGANSK-HVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWETLCSLNFASRCRSVALGQAKAMTATSG 1349
[Close]
BLAST of NO08G03070 vs. NCBI_GenBank
Match: OWZ24514.1 (Kinesin [Phytophthora megakarya])

HSP 1 Score: 176.4 bits (446), Expect = 9.800e-41
Identity = 96/144 (66.67%), Postives = 115/144 (79.86%), Query Frame = 0 
Query:    2 NEHSSRSHSIVSVRVRGESLQGDRSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINALGSKNKAHVPFRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAKKGVVGSG 146
            NEHSSRSH ++S+++    ++ D +   VS LHLIDLAGSER+SKT A+G RLKEAQNIN+SLSALGDVI ALG+ +K HVP+RNSKLTFLLQDSL GNSKVLMFVN+SP  +N  ET+CSL FA RCR+VALG AK     +G
Sbjct:  856 NEHSSRSHLVLSIKIE-TGIKSD-ARRRVSTLHLIDLAGSERVSKTAASGQRLKEAQNINRSLSALGDVIAALGANSK-HVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWETLCSLNFASRCRSVALGQAKAATATAG 996
[Close]
BLAST of NO08G03070 vs. NCBI_GenBank
Match: CCI45202.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 176.0 bits (445), Expect = 1.300e-40
Identity = 93/138 (67.39%), Postives = 114/138 (82.61%), Query Frame = 0 
Query:    1 MNEHSSRSHSIVSVRVRGESLQGDRSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINALGSKNKAHVPFRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAK 139
            +NEHSSRSH ++S+++  E++    +    S LHLIDLAGSER+SKT A+G RLKEAQNIN+SLSALGDVI+ALGS +K HVP+RNSKLTFLLQDSL GNSKVLMFVN+SP  +N  E++CSL FA RCR++ALG AK
Sbjct: 1911 INEHSSRSHLVLSIKI--ETVLKSENRRLHSTLHLIDLAGSERVSKTAASGQRLKEAQNINRSLSALGDVISALGSNSK-HVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWESLCSLNFASRCRSIALGHAK 2045
[Close]
BLAST of NO08G03070 vs. NCBI_GenBank
Match: XP_009529338.1 (hypothetical protein PHYSODRAFT_508410 [Phytophthora sojae] >EGZ15589.1 hypothetical protein PHYSODRAFT_508410 [Phytophthora sojae])

HSP 1 Score: 175.3 bits (443), Expect = 2.200e-40
Identity = 96/137 (70.07%), Postives = 112/137 (81.75%), Query Frame = 0 
Query:    2 NEHSSRSHSIVSVRVRGESLQGDRSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINALGSKNKAHVPFRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAK 139
            NEHSSRSH ++S+ +    ++ D    T SKLHLIDLAGSER+SKT A+G RLKEAQNIN+SLSALGDVI ALG+ +K HVP+RNSKLTFLLQDSL GNSKVLMFVN+SP  +N  ET+CSL FA RCR+VALG AK
Sbjct:  933 NEHSSRSHLVLSITLE-TGMKTDARRRT-SKLHLIDLAGSERVSKTAASGQRLKEAQNINRSLSALGDVIAALGANSK-HVPYRNSKLTFLLQDSLSGNSKVLMFVNVSPVQWNAWETLCSLNFASRCRSVALGQAK 1066
[Close]
BLAST of NO08G03070 vs. NCBI_GenBank
Match: XP_008864627.1 (hypothetical protein H310_02777 [Aphanomyces invadans] >ETW06552.1 hypothetical protein H310_02777 [Aphanomyces invadans])

HSP 1 Score: 172.6 bits (436), Expect = 1.400e-39
Identity = 97/148 (65.54%), Postives = 116/148 (78.38%), Query Frame = 0 
Query:    1 MNEHSSRSHSIVSVRV-RGESLQGDRSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINALGSKNKAHVPFRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAKKGV-VGSGP 147
            +NEHSSRSH +VS+ +     L G +SL   SKLHLIDLAGSER+SKT A+G RLKEAQ+IN+SLSALGDVI +LG  +K HVP+RNSKLTFLLQ+SL GNSKVLMFVN+SP  +N  E++CSL FA RCR VALG AK    + +GP
Sbjct:  944 VNEHSSRSHLVVSITITSSHKLDGRKSL---SKLHLIDLAGSERISKTAASGQRLKEAQHINRSLSALGDVIASLGGHSK-HVPYRNSKLTFLLQESLSGNSKVLMFVNVSPVQWNAWESLCSLNFAQRCRNVALGQAKANTSITNGP 1087
The following BLAST results are available for this feature:
BLAST of NO08G03070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETP50687.14.700e-4367.81hypothetical protein F442_04044 [Phytophthora para... [more]
KUF97790.14.700e-4367.81hypothetical protein AM588_10009795 [Phytophthora ... [more]
KUF98223.11.800e-4267.12Kinesin protein KIFC3 [Phytophthora nicotianae][more]
POM66575.13.400e-4170.29Kinesin-like protein [Phytophthora palmivora var. ... [more]
XP_009844677.19.800e-4168.12hypothetical protein H257_17552 [Aphanomyces astac... [more]
XP_024579568.19.800e-4166.67kinesin-like protein [Plasmopara halstedii] >CEG43... [more]
OWZ24514.19.800e-4166.67Kinesin [Phytophthora megakarya][more]
CCI45202.11.300e-4067.39unnamed protein product [Albugo candida][more]
XP_009529338.12.200e-4070.07hypothetical protein PHYSODRAFT_508410 [Phytophtho... [more]
XP_008864627.11.400e-3965.54hypothetical protein H310_02777 [Aphanomyces invad... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008722NSK008722Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03070.1NO08G03070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|525821gene_3637Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g216gene3763Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03070.1NO08G03070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03070 ID=NO08G03070|Name=NO08G03070|organism=Nannochloropsis oceanica|type=gene|length=1013bp
ATGAACGAGCACTCGAGCCGCAGCCATTCGATCGTGAGTGTGCGGGTGCG
GGGAGAGAGCCTGCAGGGGGACCGGTCCCTGGCCACGGTGAGCAAGCTGC
ATTTGATTGACTTGGCGGGGTCGGAAAGATTGTCCAAGgtagggagggag
gaaagaagggaaggaagatagacgggagggaaggaggcagccattttccc
ttgttttcttacttgaaaactgattcaccctccttccctccctcctttcc
ccccttccccctttccccgcccgcacaaaagACTGATGCCACGGGCGATC
GGCTCAAGGAAGCTCAGAACATCAACAAGTCGCTCTCCGCCCTCGGCGAT
GTGATCAACGCACTGGGCAGCAAGAACAAGGCTCACGTCCCCTTTCGGAA
CAGTAAGCTGACATTCCTCCTTCAGGACTCGCTGGGTGGAAACAGCAAGg
tgagggcaggaaggaggaagggatggagctaggaagggggggataggaac
gagtagcgtggacgtatcattcatttcttctctcagccggacatttttga
taggggcaatactgaagcgtattgtcaaacgctccttccaatcatcgtcc
ttctttcacctcatccccccatttcacaccacttcttccactttgtgcag
GTCTTAATGTTTGTCAACATCTCCCCCGCCTCTTATAACGTAAGTGAGAC
GGTCTGTTCCCTTCAATTCGCTGGCCGATGCCGCGCCGTCGCTCTAGGCG
TGGCCAAGAAGGGGGTGGTCGGTAGTGGACCAGGAGGAGGGGAAGGAGGG
GAGGGGGAGGTGGGACGGCGGAAGGGGGAGGGGGAGCAGCTGACTGTGGA
CCTGAGGAGTGCCCGTGGAGGGGAGGGGGGAGAGGAGTTAGGAGGAGAGG
GAGGAAGAGAACAGAGAAGGGTGAAGACCCCGCCGCCGCCGGCATCTGTA
GCTAGTGGGAGGGTCTCGCCTCCACCGCGGCGGAGCAGTTTGGGGAATGC
TTCATCTAGATAG
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protein sequence of NO08G03070.1

>NO08G03070.1-protein ID=NO08G03070.1-protein|Name=NO08G03070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=223bp
MNEHSSRSHSIVSVRVRGESLQGDRSLATVSKLHLIDLAGSERLSKTDAT
GDRLKEAQNINKSLSALGDVINALGSKNKAHVPFRNSKLTFLLQDSLGGN
SKVLMFVNISPASYNVSETVCSLQFAGRCRAVALGVAKKGVVGSGPGGGE
GGEGEVGRRKGEGEQLTVDLRSARGGEGGEELGGEGGREQRRVKTPPPPA
SVASGRVSPPPRRSSLGNASSR*
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Synonyms
Publications