NO08G02590, NO08G02590 (gene) Nannochloropsis oceanica

Overview
NameNO08G02590
Unique NameNO08G02590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length772
Alignment locationchr8:730747..731518 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:730747..731518 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO08G02590 vs. NCBI_GenBank
Match: XP_009824534.1 (hypothetical protein H257_02548 [Aphanomyces astaci] >ETV86062.1 hypothetical protein H257_02548 [Aphanomyces astaci])

HSP 1 Score: 159.8 bits (403), Expect = 5.400e-36
Identity = 71/125 (56.80%), Postives = 94/125 (75.20%), Query Frame = 0 
Query:    1 MASQAYDPRRSNVKEEALAEFIRAPITGELTEVPGIGPKAAEALASGDDPNEKITNTYQLLGKYLLLK-GPDDDKHTVSCVEHCDKFWAFLQSKGVNSYRSGIVQCIAEKCNILLPGSYDDTAFS 125
            M+S  YDP +S + ++ LA+F+RAP+TG LTEVPGIGP AA+ LA GDDP ++ITNT+QL+GK++LLK   DD    + C  HCD FW +L+SKG++SYRSGIV  IAEK N ++PG YD   F+
Sbjct:    1 MSSDGYDPAKSRIADDTLADFLRAPLTGVLTEVPGIGPAAAKNLAKGDDPADQITNTFQLMGKFMLLKRNEDDTDEPIDCRTHCDAFWHWLKSKGISSYRSGIVMAIAEKMNTMIPGVYDACDFN 125
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BLAST of NO08G02590 vs. NCBI_GenBank
Match: CBJ48376.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 159.1 bits (401), Expect = 9.200e-36
Identity = 72/124 (58.06%), Postives = 93/124 (75.00%), Query Frame = 0 
Query:    1 MASQAYDPRRSNVKEEALAEFIRAPITGELTEVPGIGPKAAEALASGDDPNEKITNTYQLLGKYLLLKGPDDDKHTVSCVEHCDKFWAFLQSKGVNSYRSGIVQCIAEKCNILLPGSYDDTAFS 125
            MA   YDP+RS V ++ LAEFIR+ +TG+LTEVPGI  + AE LA G+  ++K+TNTYQL+GK+L L+GPD   H V  VEHCDKFW +LQ+KG+NS RSGIV  IAEK N  +PG YD  +++
Sbjct:    1 MAEVGYDPKRSKVSDDKLAEFIRSAVTGDLTEVPGIAARGAEILADGEG-DDKVTNTYQLIGKFLALRGPDKTDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWIPGIYDADSYT 123
[Close]
BLAST of NO08G02590 vs. NCBI_GenBank
Match: XP_008863888.1 (hypothetical protein H310_02224 [Aphanomyces invadans] >ETW07795.1 hypothetical protein H310_02224 [Aphanomyces invadans])

HSP 1 Score: 157.5 bits (397), Expect = 2.700e-35
Identity = 70/125 (56.00%), Postives = 93/125 (74.40%), Query Frame = 0 
Query:    1 MASQAYDPRRSNVKEEALAEFIRAPITGELTEVPGIGPKAAEALASGDDPNEKITNTYQLLGKYLLLK-GPDDDKHTVSCVEHCDKFWAFLQSKGVNSYRSGIVQCIAEKCNILLPGSYDDTAFS 125
            M+S  YDP +S + ++ LA+F+RAP+TG LTEVPGIGP AA+ LA+GDDP ++ITNT+QL+GK++LLK   D     + C  HCD FW +L+SKG+ SYRSGIV  IAEK N ++PG YD   F+
Sbjct:    1 MSSDGYDPAKSRIADDTLADFLRAPLTGVLTEVPGIGPAAAKNLAAGDDPADQITNTFQLMGKFMLLKRNEDGSDEPIDCRTHCDAFWHWLKSKGITSYRSGIVMAIAEKMNTMIPGVYDACDFN 125
[Close]
BLAST of NO08G02590 vs. NCBI_GenBank
Match: OQR91302.1 (hypothetical protein THRCLA_22476 [Thraustotheca clavata])

HSP 1 Score: 156.8 bits (395), Expect = 4.500e-35
Identity = 71/125 (56.80%), Postives = 93/125 (74.40%), Query Frame = 0 
Query:    1 MASQAYDPRRSNVKEEALAEFIRAPITGELTEVPGIGPKAAEALASGDDPNEKITNTYQLLGKYLLLKGPDDD-KHTVSCVEHCDKFWAFLQSKGVNSYRSGIVQCIAEKCNILLPGSYDDTAFS 125
            MA   Y+P +S + E+ LA+F+RAP+TG LTEVPGIGP AA+ LASGDD  +++TNT+QL+GK+L+LK  DD+    + C  HCD FW +L+SKGV SYRSGIV  IAEK N ++PG YD   F+
Sbjct:    1 MADDGYNPEKSRIAEDTLADFLRAPLTGVLTEVPGIGPAAAKKLASGDDIADQVTNTFQLIGKFLMLKRNDDETDEPIDCPTHCDAFWHWLKSKGVTSYRSGIVMAIAEKVNTMVPGVYDACDFN 125
[Close]
BLAST of NO08G02590 vs. NCBI_GenBank
Match: OQR93017.1 (hypothetical protein ACHHYP_03012 [Achlya hypogyna])

HSP 1 Score: 154.8 bits (390), Expect = 1.700e-34
Identity = 69/125 (55.20%), Postives = 93/125 (74.40%), Query Frame = 0 
Query:    1 MASQAYDPRRSNVKEEALAEFIRAPITGELTEVPGIGPKAAEALASGDDPNEKITNTYQLLGKYLLLKGPDDD-KHTVSCVEHCDKFWAFLQSKGVNSYRSGIVQCIAEKCNILLPGSYDDTAFS 125
            MA   Y+P +S + E+ LA+F+RAP+TG LTEVPGIGP AA+ LA GDD  +++TNT+QL+GK+L+LK  DD+    + C  HCD FW +L++KGV+SYRSGIV  IAEK N ++PG YD   F+
Sbjct:    1 MADDGYNPEKSRIAEDTLADFLRAPLTGVLTEVPGIGPAAAKKLAGGDDVADQVTNTFQLIGKFLMLKRNDDETDEPIDCPTHCDAFWHWLKAKGVSSYRSGIVMAIAEKVNTMVPGVYDACDFN 125
[Close]
BLAST of NO08G02590 vs. NCBI_GenBank
Match: XP_008607465.1 (hypothetical protein SDRG_03606 [Saprolegnia diclina VS20] >EQC39404.1 hypothetical protein SDRG_03606 [Saprolegnia diclina VS20])

HSP 1 Score: 154.5 bits (389), Expect = 2.300e-34
Identity = 70/125 (56.00%), Postives = 92/125 (73.60%), Query Frame = 0 
Query:    1 MASQAYDPRRSNVKEEALAEFIRAPITGELTEVPGIGPKAAEALASGDDPNEKITNTYQLLGKYLLLKGPDDD-KHTVSCVEHCDKFWAFLQSKGVNSYRSGIVQCIAEKCNILLPGSYDDTAFS 125
            MA   Y+P +S + E+ LA+F+RAP+TG LTEVPGIGP AA+ LA GDD  +++TNT+QL+GK+L LK  DD+    + C  HCD FW +L+SKGV+SYRSGIV  IAEK N ++PG YD   F+
Sbjct:    1 MADDGYNPEKSRIAEDTLADFLRAPLTGVLTEVPGIGPAAAKKLAGGDDVADQVTNTFQLIGKFLQLKRNDDETDEPIDCPTHCDAFWHWLKSKGVSSYRSGIVMAIAEKVNTMVPGVYDACDFN 125
[Close]
BLAST of NO08G02590 vs. NCBI_GenBank
Match: XP_012193793.1 (hypothetical protein SPRG_00301 [Saprolegnia parasitica CBS 223.65] >KDO35453.1 hypothetical protein SPRG_00301 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 154.5 bits (389), Expect = 2.300e-34
Identity = 70/125 (56.00%), Postives = 92/125 (73.60%), Query Frame = 0 
Query:    1 MASQAYDPRRSNVKEEALAEFIRAPITGELTEVPGIGPKAAEALASGDDPNEKITNTYQLLGKYLLLKGPDDD-KHTVSCVEHCDKFWAFLQSKGVNSYRSGIVQCIAEKCNILLPGSYDDTAFS 125
            MA   Y+P +S + E+ LA+F+RAP+TG LTEVPGIGP AA+ LA GDD  +++TNT+QL+GK+L LK  DD+    + C  HCD FW +L+SKGV+SYRSGIV  IAEK N ++PG YD   F+
Sbjct:    1 MADDGYNPEKSRIAEDTLADFLRAPLTGVLTEVPGIGPAAAKKLAGGDDVADQVTNTFQLIGKFLSLKRNDDETDEPIDCPTHCDAFWHWLKSKGVSSYRSGIVMAIAEKVNTMVPGVYDACDFN 125
[Close]
BLAST of NO08G02590 vs. NCBI_GenBank
Match: XP_024581212.1 (hypothetical protein L914_07744 [Plasmopara halstedii] >CEG44843.1 hypothetical protein L914_07744 [Plasmopara halstedii])

HSP 1 Score: 151.0 bits (380), Expect = 2.500e-33
Identity = 68/123 (55.28%), Postives = 86/123 (69.92%), Query Frame = 0 
Query:    3 SQAYDPRRSNVKEEALAEFIRAPITGELTEVPGIGPKAAEALASGDDPNEKITNTYQLLGKYLLLK--GPDDDKHTVSCVEHCDKFWAFLQSKGVNSYRSGIVQCIAEKCNILLPGSYDDTAF 124
            +  YDP++S V E+ LA+F+RAP+TG+LTEVPGIG  A   LA  DD  E +TNT+QL+GK+LLLK    DD    + C  HCD FW +L+SKG+ +YRSGIV  IAEK N +LPG YD   F
Sbjct:    2 ADGYDPQKSRVAEDTLADFLRAPLTGDLTEVPGIGKAAVTKLAGSDDGTEAVTNTFQLIGKFLLLKANSDDDGDDVIDCAAHCDAFWFWLKSKGITAYRSGIVMAIAEKVNTMLPGIYDAADF 124
[Close]
BLAST of NO08G02590 vs. NCBI_GenBank
Match: EJK44675.1 (hypothetical protein THAOC_36769 [Thalassiosira oceanica])

HSP 1 Score: 149.8 bits (377), Expect = 5.600e-33
Identity = 68/119 (57.14%), Postives = 93/119 (78.15%), Query Frame = 0 
Query:    1 MASQAYDPRRSNVKEEALAEFIRAPITGELTEVPGIGPKAAEALASGDDPNEKITNTYQLLGKYLLLKGPDDDKHTVSCVEHCDKFWAFLQSKGVNSYRSGIVQCIAEKCNILLPGSYD 120
            M++Q YDP+RS V +++L +FIRA + G++TEVPGIGP AA+ LA G+  +E ITNTYQL+GK+L+LKGPD D + V  +EHC+KFW +LQ K ++++RS IV+ IA K N LLPG YD
Sbjct:    1 MSAQGYDPKRSRVSDDSLMDFIRAQVQGDITEVPGIGPAAAKKLAEGEH-DECITNTYQLIGKFLMLKGPDTDDNKVESMEHCEKFWYWLQDKQISAHRSAIVKAIAMKVNGLLPGVYD 118
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BLAST of NO08G02590 vs. NCBI_GenBank
Match: XP_008904770.1 (hypothetical protein PPTG_11245 [Phytophthora parasitica INRA-310] >ETM47535.1 hypothetical protein L914_07744 [Phytophthora parasitica] >ETN09624.1 hypothetical protein PPTG_11245 [Phytophthora parasitica INRA-310] >ETO76511.1 hypothetical protein F444_08071 [Phytophthora parasitica P1976] >ETP45626.1 hypothetical protein F442_07965 [Phytophthora parasitica P10297] >KUF77763.1 hypothetical protein AM587_10009771 [Phytophthora nicotianae])

HSP 1 Score: 147.1 bits (370), Expect = 3.600e-32
Identity = 64/123 (52.03%), Postives = 87/123 (70.73%), Query Frame = 0 
Query:    3 SQAYDPRRSNVKEEALAEFIRAPITGELTEVPGIGPKAAEALASGDDPNEKITNTYQLLGKYLLLK--GPDDDKHTVSCVEHCDKFWAFLQSKGVNSYRSGIVQCIAEKCNILLPGSYDDTAF 124
            +  YDP++S V E+ LA+F+RAP+TG+LTEVPGIG  A   L+  +D  + +TNT+QL+GK+L+LK    D+D   + C  HCD FW +L+SKG+ +YRSGIV  IAEK N +LPG YD   F
Sbjct:    2 ADGYDPQKSRVAEDTLADFLRAPLTGDLTEVPGIGKAAVAKLSEAEDGEDAVTNTFQLIGKFLMLKANSDDNDDGVIDCAAHCDAFWFWLKSKGITAYRSGIVMAIAEKVNTMLPGIYDAAEF 124
The following BLAST results are available for this feature:
BLAST of NO08G02590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009824534.15.400e-3656.80hypothetical protein H257_02548 [Aphanomyces astac... [more]
CBJ48376.19.200e-3658.06conserved unknown protein [Ectocarpus siliculosus][more]
XP_008863888.12.700e-3556.00hypothetical protein H310_02224 [Aphanomyces invad... [more]
OQR91302.14.500e-3556.80hypothetical protein THRCLA_22476 [Thraustotheca c... [more]
OQR93017.11.700e-3455.20hypothetical protein ACHHYP_03012 [Achlya hypogyna... [more]
XP_008607465.12.300e-3456.00hypothetical protein SDRG_03606 [Saprolegnia dicli... [more]
XP_012193793.12.300e-3456.00hypothetical protein SPRG_00301 [Saprolegnia paras... [more]
XP_024581212.12.500e-3355.28hypothetical protein L914_07744 [Plasmopara halste... [more]
EJK44675.15.600e-3357.14hypothetical protein THAOC_36769 [Thalassiosira oc... [more]
XP_008904770.13.600e-3252.03hypothetical protein PPTG_11245 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02590.1NO08G02590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582700gene_3587Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02590.1NO08G02590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02590 ID=NO08G02590|Name=NO08G02590|organism=Nannochloropsis oceanica|type=gene|length=772bp
AAACACAGCCAGCCGCTTCTACCCCTCTCCACCGCCCCATACAACGACTC
CCTCAAGCAAGATGGCGTCTCAGGCTTATGACCCCCGTCGCTCGAACGTG
AAGGAGGAGGCCTTGGCGGAGTTCATCAGGGCACCCATCACAGGGGAGTT
GACAGAAGTGCCTGGGATTGGTCCCAAGGCTGCCGAGGCCCTGGCTTCGG
GGGATGACCCTAACGAGAAAATCACCAACACCTACCAGCTCTTGGGCAAG
TACCTCTTGCTCAAAGGCCCGGACGATGACAAGCACACCGTTTCGTGCGT
GGAGCATTGCGACAAGTTTTGGGCGTTTCTGCAGAGCAAGGGTGTCAACT
CGTACCGCTCCGGCATTGTGCAGTGCATTGCAGAGAAGTGCAACATCCTT
TTACCTGGCAGCTACGACGACACGGCATTTTCTTCTTAAGGAGGGATGGA
AGTAAAGCAAACGGCAGAATAATGATAGACAAAGAAAGCTTGGGAGAAGA
AGGCGGGTGTATGAGATGGAAGGGCTATCGTGTCAAACCAAATTTATTCT
TGGTGGGTCACGGTGGTGAGAGGGTGTGTGACCGTCGTATGTGTGTCTAT
TACTTGCACATGTATTGGGGGGAGTAAAAAAAAGGACGTAGAAAACGGGA
GGAGTGAAGACGGTATTCGAAAACAAGTGGGAGCTAGCGATAAAGGGAGG
GGGTAGGATGTGAGAGTAAGGTTGATGAAAAAAAGGGGCAGCAACGTGGC
TTCTTGACGTTTGGCTTTTTGG
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protein sequence of NO08G02590.1

>NO08G02590.1-protein ID=NO08G02590.1-protein|Name=NO08G02590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=126bp
MASQAYDPRRSNVKEEALAEFIRAPITGELTEVPGIGPKAAEALASGDDP
NEKITNTYQLLGKYLLLKGPDDDKHTVSCVEHCDKFWAFLQSKGVNSYRS
GIVQCIAEKCNILLPGSYDDTAFSS*
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Synonyms
Publications